Pregenerated sensors for ATP6V1G3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026394Ensembl transcript IDs: ENSMUST00000027643.6
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTCTGAGGCTCTAATGACCATTATGAGCAGGGAACTTTTCAAATaGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTTCCCATC | + |
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Preference number: 1 (lower is better) Translates to: SSEALMTIMSRELFK*QLSSLYLASVPFPI Trigger: GATGGGAAATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTGCTCATAATGGTCATTAGAGCCTCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCAAGGGACCAGCTCTACTAGATGTCTGTTTCTCCACACAAGGCCTAAGAGTGTATCCCACTCTATaGCTATGGACTTGGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: GSKGPALLDVCFSTQGLRVYPTL*LWTWMC Trigger: ACACATCCAAGTCCATAGGCATAGAGTGGGATACAC...TCTTAGGCCTTGTGTGGAGAAACAGACATCTAGTAGAGCTGGTCCCTTGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGTCAAGTTCTGAGGCTCTAATGACCATTATGAGCAGGGAACTTTTCAAAGCCATCCAGGAGAAATaGCACCATGTTACTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: SRSSSEALMTIMSRELFKAIQEK*HHVTYF Trigger: AAAATAAGTAACATGGTGTCATTTCTCCTGGATGGC...TTTGAAAAGTTCCCTGCTCATAATGGTCATTAGAGCCTCAGAACTTGACCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAATGGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTTCCCATCTTATCTACTCTCTCAGATaGCCACCTTTTCTTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: FQMAALITLSSFRSISHLIYSLR*PPFLSK Trigger: TTTTGAAAGAAAAGGTGGTCATCTGAGAGAGTAGAT...AAGATGGGAAATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR CCA 72 bp | CCCACCAAGGTCAACAATACTGCTAGTGCTCAGCAGTaGGTATTTAGAAAGCTTCCTGGGAGGGAACTTGTG | + |
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Preference number: 3 (lower is better) Translates to: PTKVNNTASAQQ*VFRKLPGRELV Trigger: CACAAGTTCCCTCCCAGGAAGCTTTCTAAATACCCACTGCTGAGCACTAGCAGTATTGTTGACCTTGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR TCA 72 bp | CTGACACTGTTTCCCAGGCAACTCCAGGTCAAGTTCTaGGGCTCTAATGACCATTATGAGCAGGGAACTTTT | + |
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Preference number: 3 (lower is better) Translates to: LTLFPRQLQVKF*GSNDHYEQGTF Trigger: AAAAGTTCCCTGCTCATAATGGTCATTAGAGCCTCAGAACTTGACCTGGAGTTGCCTGGGAAACAGTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR CCA 72 bp | GCTCTAATGACCATTATGAGCAGGGAACTTTTCAAATaGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ALMTIMSRELFK*QLSSLYLASVP Trigger: TGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTGCTCATAATGGTCATTAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| 3UTR GCA 72 bp | GACATGAAAGTTTATAGTAAACATCAGGTGCACAGTTaGAGACCTTTAATATCAACAGAATGTGTATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: DMKVYSKHQVHS*RPLISTECVSH Trigger: GTGGGATACACATTCTGTTGATATTAAAGGTCTGCAACTGTGCACCTGATGTTTACTATAAACTTTCATGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR TCA 90 bp | GGAAGCAAGGGACCAGCTCTACTAGATGTCTGTTTCTCCACACAAGGCCTAAGATCCGAGAGGTGGCTCTaGGAGCCCATTATCTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSKGPALLDVCFSTQGLRSERWL*EPIILA Trigger: GGCTAAGATAATGGGCTCTCAGAGCCACCTCTCGGA...TCTTAGGCCTTGTGTGGAGAAACAGACATCTAGTAGAGCTGGTCCCTTGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR GCA 90 bp | CAGGGAACTTTTCAAATGGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTCTTGGCCCTTTTCTCTaGCTGCAGGAGCTGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: QGTFQMAALITLSSFRSILGPFL*LQELLD Trigger: ATCCAACAGCTCCTGCAGGCAGAGAAAAGGGCCAAG...AATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR CCA 90 bp | GCTCTAATGACCATTATGAGCAGGGAACTTTTCAAATGGCAGCTCTCATCACTCCATCTAGCTTGTCCTTaGCCCTTTTCTCTGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALMTIMSRELFKWQLSSLHLACP*PFSLPA Trigger: TGCAGGCAGAGAAAAGGGCCAAGGACAAGCTAGATG...GAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTGCTCATAATGGTCATTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR GCA 90 bp | TCCAGGTCAAGTTCTGAGGCTCTAATGACCATTATGAGCAGGGAACTTTTCAAAAAGTCCTTCTCCATCTaGATTCTGTACTGGTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: SRSSSEALMTIMSRELFKKSFSI*ILYWSV Trigger: GACGGACCAGTACAGAATGCAGATGGAGAAGGACTT...TTTGAAAAGTTCCCTGCTCATAATGGTCATTAGAGCCTCAGAACTTGACCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR GCA 90 bp | TTTCAAATGGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTTCCCATCTTGCTTCTTCCTTAGCTTaGCTCAGTCGCTTTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FQMAALITLSSFRSISHLASSLA*LSRFPF Trigger: AAAAGGAAAGCGACTGAGGCAAGCTAAGGAAGAAGC...AAGATGGGAAATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR GCA 90 bp | CAGGGAACTTTTCAAATGGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTATCTTCTCTAGTGTCTaGTCTTCTATTTCATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: QGTFQMAALITLSSFRSIIFSSV*SSISSE Trigger: CTCGGATGAAATAGAAGAGCAGACACTAGAGAAGAT...AATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR GCA 90 bp | TTTCAAATGGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTTCCCATCTTACCATGCTCAATAGCTaGTTAATCACGCTTTCCATA | + |
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Preference number: 4 (lower is better) Translates to: FQMAALITLSSFRSISHLTMLNS*LITLSI Trigger: TATGGAAAGCGTGATTAAGCAGCTATTGAGCATGGT...AAGATGGGAAATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR CCA 90 bp | AGACCTTTAATATCAACAGAATGTGTATCCCACTCTATGCCTATGGACTTGGATGTTCACATGGACTTCTaGTTTCATGTCGCACACCAT | + |
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Preference number: 4 (lower is better) Translates to: RPLISTECVSHSMPMDLDVHMDF*FHVAHH Trigger: ATGGTGTGCGACATGAAACCAGAAGTCCATGTGAAC...ATCCAAGTCCATAGGCATAGAGTGGGATACACATTCTGTTGATATTAAAGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR TCA 90 bp | AGACCTTTAATATCAACAGAATGTGTATCCCACTCTATGCCTATGGACTTGGATTTCCGTTCAATTCTTTaGTCTTCTCTAGTGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RPLISTECVSHSMPMDLDFRSIL*SSLVSA Trigger: AGCAGACACTAGAGAAGATCAAAGAATTGAACGGAA...ATCCAAGTCCATAGGCATAGAGTGGGATACACATTCTGTTGATATTAAAGGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS CCA 90 bp | TTAGCCTGCTTCAGGCGGAAGTCCTTCTCCATCTGCATTCTGTACTaGTCCGTCTCCGCCACAGCTTCTTCCTTAGCTTGCCTCAGTCGC | + |
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Preference number: 5 (lower is better) Translates to: LACFRRKSFSICILY*SVSATASSLACLSR Trigger: GCGACTGAGGCAAGCTAAGGAAGAAGCTGTGGCGGAGACGGACCAGTACAGAATGCAGATGGAGAAGGACTTCCGCCTGAAGCAGGCTAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS GCA 90 bp | GAGCCCATTATCTTAGCCTGCTTCAGGCGGAAGTCCTTCTCCATCTaGATTCTGTACTGGTCCGTCTCCGCCACAGCTTCTTCCTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: EPIILACFRRKSFSI*ILYWSVSATASSLA Trigger: AGCTAAGGAAGAAGCTGTGGCGGAGACGGACCAGTACAGAATGCAGATGGAGAAGGACTTCCGCCTGAAGCAGGCTAAGATAATGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS TCA 90 bp | ATCTTCTCTAGTGTCTGCTCTTCTATTTCATCCGAGAGGTGGCTCTaGGAGCCCATTATCTTAGCCTGCTTCAGGCGGAAGTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: IFSSVCSSISSERWL*EPIILACFRRKSFS Trigger: GGAGAAGGACTTCCGCCTGAAGCAGGCTAAGATAATGGGCTCTCAGAGCCACCTCTCGGATGAAATAGAAGAGCAGACACTAGAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS GCA 90 bp | TGCATTCTGTACTGGTCCGTCTCCGCCACAGCTTCTTCCTTAGCTTaGCTCAGTCGCTTTCCTTTTCTTTTCTTTGCCTCATCTAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CILYWSVSATASSLA*LSRFPFLFFASSSL Trigger: CAAGCTAGATGAGGCAAAGAAAAGAAAAGGAAAGCGACTGAGGCAAGCTAAGGAAGAAGCTGTGGCGGAGACGGACCAGTACAGAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR CAA 90 bp | CAGTTGCAGACCTTTAATATCAACAGAATGTGTATCCCACTCTATGCCTATGGATCATCTAGCTTGTCCTaGGCCCTTTTCTCTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: QLQTFNINRMCIPLYAYGSSSLS*ALFSAC Trigger: GCAGGCAGAGAAAAGGGCCAAGGACAAGCTAGATGA...TCCATAGGCATAGAGTGGGATACACATTCTGTTGATATTAAAGGTCTGCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR CAA 90 bp | GCTCTAATGACCATTATGAGCAGGGAACTTTTCAAATGGCAGCTCTCATCACTCTTTGCCTCATCTAGCTaGTCCTTGGCCCTTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ALMTIMSRELFKWQLSSLFASSS*SLALFS Trigger: AGAGAAAAGGGCCAAGGACAAGCTAGATGAGGCAAA...GAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTGCTCATAATGGTCATTAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS-3UTR CAA 90 bp | CAGGGAACTTTTCAAATGGCAGCTCTCATCACTCTATCTAGCTTCCGTTCCATTAGCTTCTTCCTTAGCTaGCCTCAGTCGCTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: QGTFQMAALITLSSFRSISFFLS*PQSLSF Trigger: AAAGGAAAGCGACTGAGGCAAGCTAAGGAAGAAGCT...AATGGAACGGAAGCTAGATAGAGTGATGAGAGCTGCCATTTGAAAAGTTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS CCA 72 bp | TTCAGGCGGAAGTCCTTCTCCATCTGCATTCTGTACTaGTCCGTCTCCGCCACAGCTTCTTCCTTAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FRRKSFSICILY*SVSATASSLAC Trigger: GCAAGCTAAGGAAGAAGCTGTGGCGGAGACGGACCAGTACAGAATGCAGATGGAGAAGGACTTCCGCCTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS TCA 72 bp | AGTGTCTGCTCTTCTATTTCATCCGAGAGGTGGCTCTaGGAGCCCATTATCTTAGCCTGCTTCAGGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVCSSISSERWL*EPIILACFRRK Trigger: CTTCCGCCTGAAGCAGGCTAAGATAATGGGCTCTCAGAGCCACCTCTCGGATGAAATAGAAGAGCAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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| CDS TCA 72 bp | TTTCCATACACTTGTTGTAGCTTCCGTTCAATTCTTTaGTCTTCTCTAGTGTCTGCTCTTCTATTTCATCCG | + |
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Preference number: 6 (lower is better) Translates to: FPYTCCSFRSIL*SSLVSALLFHP Trigger: CGGATGAAATAGAAGAGCAGACACTAGAGAAGATCAAAGAATTGAACGGAAGCTACAACAAGTGTATGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027643.6 |
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