Pregenerated sensors for ATP6V1G2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024403Ensembl transcript IDs: ENSMUST00000068261.9, ENSMUST00000118384.8, ENSMUST00000130992.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCAAGGACCAGGGGTGGGAGAGGAACAGAGGTTCCCCTGCTCTaGAGTCAGGGTGCTTTCATAACTGTCACCAGGACATATATTTCA | + |
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Preference number: 1 (lower is better) Translates to: PARTRGGRGTEVPLL*SQGAFITVTRTYIS Trigger: TGAAATATATGTCCTGGTGACAGTTATGAAAGCACCCTGACTTCAGAGCAGGGGAACCTCTGTTCCTCTCCCACCCCTGGTCCTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCGGGGGCATGATGTGCCAAGGGAGAGCCAGAGAAACAAATTCTTTAGAGGGGGTCCGGTGGGGATaGCGTGGGCATTCATTAGTA | + |
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Preference number: 2 (lower is better) Translates to: LFGGMMCQGRARETNSLEGVRWG*RGHSLV Trigger: TACTAATGAATGCCCACGTCATCCCCACCGGACCCC...CTCTAAAGAATTTGTTTCTCTGGCTCTCCCTTGGCACATCATGCCCCCGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGAGGAACAGAGGTTCCCCTGCTCTGAAGTCAGGGTGCTTTCATAACTGTCCAAGGCTCTGCGCATaGGACACAAGTGGTTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: WERNRGSPALKSGCFHNCPRLCA*DTSGFE Trigger: CTCAAAACCACTTGTGTCGCATGCGCAGAGCCTTGG...ACAGTTATGAAAGCACCCTGACTTCAGAGCAGGGGAACCTCTGTTCCTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR CAA 90 bp | GGATTGAACCCAAGGCTCTGCGCATGCGACACAAGTGGTTTTGAGTaGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: GLNPRLCACDTSGFE*GYFSVDGADRRSHS Trigger: AGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAAAACCACTTGTGTCGCATGCGCAGAGCCTTGGGTTCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCGGGGGCATGATGTGCCAAGGGAGAGCCAGAGAAACAAATTCTTTAGAGGCTCTGAAGTCAGGGTaGTTTCATAACTGTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LFGGMMCQGRARETNSLEALKSG*FHNCHQ Trigger: CTGGTGACAGTTATGAAAGCACCCTGACTTCAGAGC...CTCTAAAGAATTTGTTTCTCTGGCTCTCCCTTGGCACATCATGCCCCCGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCGGGGGCATGATGTGCCAAGGGAGAGCCAGAGAAACAAATTCTTTAGAGTGGGATATTTCTCTGTaGACGGAGCTGACAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFGGMMCQGRARETNSLEWDISL*TELTEG Trigger: TCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCA...CTCTAAAGAATTTGTTTCTCTGGCTCTCCCTTGGCACATCATGCCCCCGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCATGCATGTGAATGTCATAGATATCTTCAGCTCCCGGAAGCAGCAAGATTTTTAGTAAACTTCCAGTaGGTGTCATGGAACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: MHACECHRYLQLPEAARFLVNFQ*VSWNRE Trigger: CTCTCTGTTCCATGACACCCACTGGAAGTTTACTAA...AAATCTTGCTGCTTCCGGGAGCTGAAGATATCTATGACATTCACATGCATGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCATGCATGTGAATGTCATAGATATCTTCAGCTCCCGGAAGCAGCAAGATTTTTACTAGTGTCACAGTaGCTGAACAAAGCTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: MHACECHRYLQLPEAARFLLVSQ*LNKAGT Trigger: TGTTCCAGCTTTGTTCAGCCACTGTGACACTAGTAA...AAATCTTGCTGCTTCCGGGAGCTGAAGATATCTATGACATTCACATGCATGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR TCA 72 bp | ACCAGGGGTGGGAGAGGAACAGAGGTTCCCCTGCTCTaGAGTCAGGGTGCTTTCATAACTGTCACCAGGACA | + |
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Preference number: 3 (lower is better) Translates to: TRGGRGTEVPLL*SQGAFITVTRT Trigger: TGTCCTGGTGACAGTTATGAAAGCACCCTGACTTCAGAGCAGGGGAACCTCTGTTCCTCTCCCACCCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR TCA 72 bp | CCAGGACATATATTTCACAGAGGGGTCCGGTGGGGATaGCGTGGGCATTCATTAGTAAACTTCCAGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: PGHIFHRGVRWG*RGHSLVNFQWV Trigger: CACCCACTGGAAGTTTACTAATGAATGCCCACGTCATCCCCACCGGACCCCTCTGTGAAATATATGTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR CCA 72 bp | CAAGGCTCTGCGCATGCGACACAAGTGGTTTTGAGTTaGGATATTTCTCTGTGGACGGAGCTGACAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QGSAHATQVVLS*DISLWTELTEG Trigger: TCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAAAACCACTTGTGTCGCATGCGCAGAGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| 3UTR CCA 72 bp | GCGACACAAGTGGTTTTGAGTTGGGATATTTCTCTGTaGACGGAGCTGACAGAAGGAGTCACTCTAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: ATQVVLSWDISL*TELTEGVTLGM Trigger: CATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAAAACCACTTGTGTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| 3UTR GCA 72 bp | GAGAGGAACAGAGGTTCCCCTGCTCTGAAGTCAGGGTaGTTTCATAACTGTCACCAGGACATATATTTCACA | + |
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Preference number: 3 (lower is better) Translates to: ERNRGSPALKSG*FHNCHQDIYFT Trigger: TGTGAAATATATGTCCTGGTGACAGTTATGAAAGCACCCTGACTTCAGAGCAGGGGAACCTCTGTTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR TCA 72 bp | GTCATGATACAGGCACTCCGTCATCTGGAACTATGCTaGATTCTCACAGATAATTCACAGCAGCCACCTTAC | + |
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Preference number: 3 (lower is better) Translates to: VMIQALRHLELC*ILTDNSQQPPY Trigger: GTAAGGTGGCTGCTGTGAATTATCTGTGAGAATTCAGCATAGTTCCAGATGACGGAGTGCCTGTATCATGAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR CAA 90 bp | ATAGATATCTTCAGCTCCCGGAAGCAGCAAGATTTGGGAAAACAGAGAAAGAGGGCGACACAAGTGGTTTaGAGTTGGGATATTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: IDIFSSRKQQDLGKQRKRATQVV*SWDISL Trigger: CAGAGAAATATCCCAACTCAAAACCACTTGTGTCGC...CCTCTTTCTCTGTTTTCCCAAATCTTGCTGCTTCCGGGAGCTGAAGATATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGAAGTCAGGGTGCTTTCATAACTGTCACCAGGACATATATTTCACAGAGACAAGTGGTTTTGAGTaGGGATATTTCTCTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: ALKSGCFHNCHQDIYFTETSGFE*GYFSVD Trigger: GTCCACAGAGAAATATCCCAACTCAAAACCACTTGT...CTCTGTGAAATATATGTCCTGGTGACAGTTATGAAAGCACCCTGACTTCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR GCA 90 bp | GTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGATGTGTCCCTGAGCGATGGTGCCTCCTCCTTCGCCTaGTTCAGTCGCCGGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VDGADRRSHSRDVSLSDGASSFA*FSRRAF Trigger: GAAGGCCCGGCGACTGAAGCAGGCGAAGGAGGAGGC...ACCATCGCTCAGGGACACATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR CCA 90 bp | GTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGATGTGTCCCTGAGCGATGGTTCCCCTGAGAGCCCATaGCCGCCTGCTGCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VDGADRRSHSRDVSLSDGSPESP*PPAACS Trigger: AGAGCAAGCAGCAGGCGGCCATGGGCTCTCAGGGGA...ACCATCGCTCAGGGACACATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | GAGCGTTGTTGCTGTCATTCCAGTCACAAAGATGAGGACACTGAGGCTTCCAGGGCAGACAGGTTCCCCTaGGAGCCCATGGCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERCCCHSSHKDEDTEASRADRFP*EPMAAC Trigger: GCAGGCGGCCATGGGCTCTCAGGGGAACCTGTCTGC...CCTGGAAGCCTCAGTGTCCTCATCTTTGTGACTGGAATGACAGCAACAACGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR TCA 90 bp | GTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGATGTGTCCCTGAGCGATGGTGAACTCTGCATGCCCTaGACCTGCCGTCTTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VDGADRRSHSRDVSLSDGELCMP*TCRLVA Trigger: GGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTC...ACCATCGCTCAGGGACACATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGATGTGTCCCTGAGCCCTGTTCCCGCTCCCTaGGGTATTGCTCCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDGADRRSHSRDVSLSPVPAP*GIAPPP Trigger: TGGAGGTGGAGCAATACCGCAGGGAGCGGGAACAGG...GCTCAGGGACACATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGATGTGTCCCTGAGCCGCTCCCGATTCCTCTaGTGGGAACTCTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDGADRRSHSRDVSLSRSRFL*WELCMP Trigger: GGGCATGCAGAGTTCCCAGCAGAGGAATCGGGAGCG...GCTCAGGGACACATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR GCA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGGCCTCCTCCTTCGCCTaGTTCAGTCGCCGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSWDISLWTELTEGVTLGASSFA*FSRRAF Trigger: GAAGGCCCGGCGACTGAAGCAGGCGAAGGAGGAGGC...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGGGTGGACCTGGGGCCTaGCTTCACAGACCATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LSWDISLWTELTEGVTLGGGPGA*LHRPCR Trigger: TCGGCATGGTCTGTGAAGTCAGGCCCCAGGTCCACC...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGTGCTCCACCTCCATTTaGGCCTCCTCCTTCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSWDISLWTELTEGVTLGCSTSI*ASSFAC Trigger: GCAGGCGAAGGAGGAGGCTCAAATGGAGGTGGAGCA...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCGGGGGCATGATGTGCCAAGGGAGAGCCAGAGAAACAAATTCTTTAGAGGCCTGCTGCTTGCTCTaGAACTCCTGTTCCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFGGMMCQGRARETNSLEACCLL*NSCSRS Trigger: GGAGCGGGAACAGGAGTTTCAGAGCAAGCAGCAGGC...CTCTAAAGAATTTGTTTCTCTGGCTCTCCCTTGGCACATCATGCCCCCGAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR TCA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGGCCTGCTGCTTGCTCTaGAACTCCTGTTCCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSWDISLWTELTEGVTLGACCLL*NSCSRS Trigger: GGAGCGGGAACAGGAGTTTCAGAGCAAGCAGCAGGC...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | GATATCTTCAGCTCCCGGAAGCAGCAAGATTTGGGAAAACAGAGAAAGAGGGGGGAACTCTGCATGCCCTaGACCTGCCGTCTTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: DIFSSRKQQDLGKQRKRGELCMP*TCRLVA Trigger: GGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTC...CCCCCTCTTTCTCTGTTTTCCCAAATCTTGCTGCTTCCGGGAGCTGAAGATATC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR GCA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGCGCTCCCGATTCCTCTaGTGGGAACTCTGCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSWDISLWTELTEGVTLGRSRFL*WELCMP Trigger: GGGCATGCAGAGTTCCCAGCAGAGGAATCGGGAGCG...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | TTCACAGCAGCCACCTTACAAAGTGAGCGTTGTTGCTGTCATTCCAGTCACAAAGGTGGACCTGGGGCCTaGCTTCACAGACCATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: FTAATLQSERCCCHSSHKGGPGA*LHRPCR Trigger: TCGGCATGGTCTGTGAAGTCAGGCCCCAGGTCCACC...TTTGTGACTGGAATGACAGCAACAACGCTCACTTTGTAAGGTGGCTGCTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR GCA 90 bp | CTGTTCGGGGGCATGATGTGCCAAGGGAGAGCCAGAGAAACAAATTCTTTAGAGTGCCGTCTTGTGGCCTaGTCCACTTCAGCAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LFGGMMCQGRARETNSLECRLVA*STSADR Trigger: CCTGTCTGCTGAAGTGGAGCAGGCCACAAGACGGCA...CTCTAAAGAATTTGTTTCTCTGGCTCTCCCTTGGCACATCATGCCCCCGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR CCA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGGAACCTGCCGTCTTGTaGCCTGCTCCACTTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSWDISLWTELTEGVTLGEPAVL*PAPLQQ Trigger: CTGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTC...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| 3UTR CAA 72 bp | CCAAGGCTCTGCGCATGCGACACAAGTGGTTTTGAGTaGGGATATTTCTCTGTGGACGGAGCTGACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PRLCACDTSGFE*GYFSVDGADRR Trigger: CCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAAAACCACTTGTGTCGCATGCGCAGAGCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR TCA 90 bp | TTCACAGCAGCCACCTTACAAAGTGAGCGTTGTTGCTGTCATTCCAGTCACAAATGCTCCACCTCCATTTaGGCCTCCTCCTTCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FTAATLQSERCCCHSSHKCSTSI*ASSFAC Trigger: GCAGGCGAAGGAGGAGGCTCAAATGGAGGTGGAGCA...TTTGTGACTGGAATGACAGCAACAACGCTCACTTTGTAAGGTGGCTGCTGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR GCA 90 bp | ACACAAGTGGTTTTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGACCTGTTCCCGCTCCCTaGGGTATTGCTCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQVVLSWDISLWTELTEGPVPAP*GIAPPP Trigger: TGGAGGTGGAGCAATACCGCAGGGAGCGGGAACAGG...TCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAAAACCACTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR CCA 90 bp | ATGCATGCATGTGAATGTCATAGATATCTTCAGCTCCCGGAAGCAGCAAGATTTTCCCCTGAGAGCCCATaGCCGCCTGCTGCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: MHACECHRYLQLPEAARFSPESP*PPAACS Trigger: AGAGCAAGCAGCAGGCGGCCATGGGCTCTCAGGGGA...AAATCTTGCTGCTTCCGGGAGCTGAAGATATCTATGACATTCACATGCATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR CCA 90 bp | ACACAAGTGGTTTTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGAACCTGCCGTCTTGTaGCCTGCTCCACTTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQVVLSWDISLWTELTEGEPAVL*PAPLQQ Trigger: CTGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTC...TCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAAAACCACTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| 3UTR CAA 72 bp | CTTCCAGTGGGTGTCATGGAACAGAGAGATTCGGGTTaGTCGGGTTTGAACAGGCTACTTGTAAGTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPVGVMEQRDSG*SGLNRLLVSLR Trigger: CCTGAGACTTACAAGTAGCCTGTTCAAACCCGACAAACCCGAATCTCTCTGTTCCATGACACCCACTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS TCA 90 bp | GCCAGGACGCGCTCCCGATTCCTCTGCTGGGAACTCTGCATGCCCTaGACCTGCCGTCTTGTGGCCTGCTCCACTTCAGCAGACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: ARTRSRFLCWELCMP*TCRLVACSTSADRF Trigger: GAACCTGTCTGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTCCCAGCAGAGGAATCGGGAGCGCGTCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS TCA 90 bp | TTGGGGTGGACCTGGGGCCTGACTTCACAGACCATGCCGAGAAGCTaGGCCAGGACGCGCTCCCGATTCCTCTGCTGGGAACTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: LGWTWGLTSQTMPRS*ARTRSRFLCWELCM Trigger: CATGCAGAGTTCCCAGCAGAGGAATCGGGAGCGCGTCCTGGCTCAGCTTCTCGGCATGGTCTGTGAAGTCAGGCCCCAGGTCCACCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS GCA 90 bp | CCATGGCCGCCTGCTGCTTGCTCTGAAACTCCTGTTCCCGCTCCCTaGGGTATTGCTCCACCTCCATTTGAGCCTCCTCCTTCGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PWPPAACSETPVPAP*GIAPPPFEPPPSPA Trigger: AGCAGGCGAAGGAGGAGGCTCAAATGGAGGTGGAGCAATACCGCAGGGAGCGGGAACAGGAGTTTCAGAGCAAGCAGCAGGCGGCCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS CCA 90 bp | GATTCCTCTGCTGGGAACTCTGCATGCCCTGAACCTGCCGTCTTGTaGCCTGCTCCACTTCAGCAGACAGGTTCCCCTGAGAGCCCATGG | + |
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Preference number: 5 (lower is better) Translates to: DSSAGNSACPEPAVL*PAPLQQTGSPESPW Trigger: CCATGGGCTCTCAGGGGAACCTGTCTGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTCCCAGCAGAGGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS-3UTR CAA 90 bp | GTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGATGTGTCCCTGAGCGATGGTCCTGAACCTGCCGTCTaGTGGCCTGCTCCACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: VDGADRRSHSRDVSLSDGPEPAV*WPAPLQ Trigger: CTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGG...ACCATCGCTCAGGGACACATCCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR CAA 90 bp | AACAGAGGTTCCCCTGCTCTGAAGTCAGGGTGCTTTCATAACTGTCACCAGGACCCGCTCCCTGCGGTATaGCTCCACCTCCATTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NRGSPALKSGCFHNCHQDPLPAV*LHLHLS Trigger: GCTCAAATGGAGGTGGAGCAATACCGCAGGGAGCGG...GTCCTGGTGACAGTTATGAAAGCACCCTGACTTCAGAGCAGGGGAACCTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS-3UTR CAA 90 bp | TTGAGTTGGGATATTTCTCTGTGGACGGAGCTGACAGAAGGAGTCACTCTAGGGCCGCTCCCTGCGGTATaGCTCCACCTCCATTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LSWDISLWTELTEGVTLGPLPAV*LHLHLS Trigger: GCTCAAATGGAGGTGGAGCAATACCGCAGGGAGCGG...CCCTAGAGTGACTCCTTCTGTCAGCTCCGTCCACAGAGAAATATCCCAACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS-3UTR CAA 90 bp | ATGCATGCATGTGAATGTCATAGATATCTTCAGCTCCCGGAAGCAGCAAGATTTCCTGAACCTGCCGTCTaGTGGCCTGCTCCACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: MHACECHRYLQLPEAARFPEPAV*WPAPLQ Trigger: CTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGG...AAATCTTGCTGCTTCCGGGAGCTGAAGATATCTATGACATTCACATGCATGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068261.9 |
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| CDS TCA 72 bp | ACCTGGGGCCTGACTTCACAGACCATGCCGAGAAGCTaGGCCAGGACGCGCTCCCGATTCCTCTGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TWGLTSQTMPRS*ARTRSRFLCWE Trigger: TTCCCAGCAGAGGAATCGGGAGCGCGTCCTGGCTCAGCTTCTCGGCATGGTCTGTGAAGTCAGGCCCCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS CAA 90 bp | CCCGATTCCTCTGCTGGGAACTCTGCATGCCCTGAACCTGCCGTCTaGTGGCCTGCTCCACTTCAGCAGACAGGTTCCCCTGAGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PDSSAGNSACPEPAV*WPAPLQQTGSPESP Trigger: TGGGCTCTCAGGGGAACCTGTCTGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTCCCAGCAGAGGAATCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS TCA 72 bp | CGCTCCCGATTCCTCTGCTGGGAACTCTGCATGCCCTaGACCTGCCGTCTTGTGGCCTGCTCCACTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RSRFLCWELCMP*TCRLVACSTSA Trigger: TGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTCCCAGCAGAGGAATCGGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS CCA 72 bp | GCTGGGAACTCTGCATGCCCTGAACCTGCCGTCTTGTaGCCTGCTCCACTTCAGCAGACAGGTTCCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AGNSACPEPAVL*PAPLQQTGSPE Trigger: CTCAGGGGAACCTGTCTGCTGAAGTGGAGCAGGCCACAAGACGGCAGGTTCAGGGCATGCAGAGTTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 ENSMUST00000130992.2 |
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| CDS CAA 90 bp | CGCCTGCTGCTTGCTCTGAAACTCCTGTTCCCGCTCCCTGCGGTATaGCTCCACCTCCATTTGAGCCTCCTCCTTCGCCTGCTTCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: RLLLALKLLFPLPAV*LHLHLSLLLRLLQS Trigger: CGACTGAAGCAGGCGAAGGAGGAGGCTCAAATGGAGGTGGAGCAATACCGCAGGGAGCGGGAACAGGAGTTTCAGAGCAAGCAGCAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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| CDS CAA 72 bp | CTTGCTCTGAAACTCCTGTTCCCGCTCCCTGCGGTATaGCTCCACCTCCATTTGAGCCTCCTCCTTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LALKLLFPLPAV*LHLHLSLLLRL Trigger: CAGGCGAAGGAGGAGGCTCAAATGGAGGTGGAGCAATACCGCAGGGAGCGGGAACAGGAGTTTCAGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068261.9 ENSMUST00000118384.8 |
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