Pregenerated sensors for ATP6V1G1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039105

Ensembl transcript IDs: ENSMUST00000035301.7

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CCTTCCAGAACAGAACTCCAGCTCTGTGGAGGTTTTCCTATTCTATaGGGGCAGATCTCATGCCAACCCACAGAGCAGGCGCTTCCACCT	+
Preference number: 1 (lower is better) Translates to: PSRTELQLCGGFPIL*GQISCQPTEQALPP Trigger: AGGTGGAAGCGCCTGCTCTGTGGGTTGGCATGAGATCTGCCCCCATAGAATAGGAAAACCTCCACAGAGCTGGAGTTCTGTTCTGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035301.7
3UTR-3UTR GCA 90 bp	GTAAGAAAGGAGAAGGGAACAGTTTACTCCCCTTCTTCCTTCAAAGAATTTTTCTTGATATCGATTACTTaGATGAAGACACAGGAAAAC	+
Preference number: 2 (lower is better) Translates to: VRKEKGTVYSPSSFKEFFLISIT*MKTQEN Trigger: GTTTTCCTGTGTCTTCATGCAAGTAATCGATATCAA...GAAAAATTCTTTGAAGGAAGAAGGGGAGTAAACTGTTCCCTTCTCCTTTCTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035301.7
3UTR GCA 72 bp	CCTAAATTATCCAGGCTAGAGTACTCTAAGGCTGGCTaGTTCTTCATAGGAGTTACTAATAGCTACTTCTAC	+
Preference number: 3 (lower is better) Translates to: PKLSRLEYSKAG*FFIGVTNSYFY Trigger: GTAGAAGTAGCTATTAGTAACTCCTATGAAGAAGCAGCCAGCCTTAGAGTACTCTAGCCTGGATAATTTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035301.7
3UTR TCA 72 bp	GACATACACTCCTTAAAGACACACAAGATAAGAAGATaGAACTTCAGGTACATAAGAAGTCTGTACAAAAAG	+
Preference number: 3 (lower is better) Translates to: DIHSLKTHKIRR*NFRYIRSLYKK Trigger: CTTTTTGTACAGACTTCTTATGTACCTGAAGTTTCATCTTCTTATCTTGTGTGTCTTTAAGGAGTGTATGTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035301.7
CDS-3UTR CCA 90 bp	CTGTGGAGGTTTTCCTATTCTATGGGGGCAGATCTCATGCCAACCCACAGAGCACTGCTGCAGCTGCCATaGGAGCCCAATGCCGCAGCT	+
Preference number: 4 (lower is better) Translates to: LWRFSYSMGADLMPTHRALLQLP*EPNAAA Trigger: AGCTGCGGCATTGGGCTCCCATGGCAGCTGCAGCAG...TGCTCTGTGGGTTGGCATGAGATCTGCCCCCATAGAATAGGAAAACCTCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035301.7
CDS-3UTR GCA 90 bp	TGTGGAGGTTTTCCTATTCTATGGGGGCAGATCTCATGCCAACCCACAGAGCAGGCCATGGGAGCCCAATaGCGCAGCTTCCTTGGCCTT	+
Preference number: 4 (lower is better) Translates to: CGGFPILWGQISCQPTEQAMGAQ*RSFLGL Trigger: AAGGCCAAGGAAGCTGCGGCATTGGGCTCCCATGGC...CTGCTCTGTGGGTTGGCATGAGATCTGCCCCCATAGAATAGGAAAACCTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035301.7
CDS-3UTR CAA 90 bp	CCTATTCTATGGGGGCAGATCTCATGCCAACCCACAGAGCAGGCGCTTCCACCTCTCCGGTTCTTTCGCTaGCGGGCCTCGGACACCTTC	+
Preference number: 5 (lower is better) Translates to: PILWGQISCQPTEQALPPLRFFR*RASDTF Trigger: GAAGGTGTCCGAGGCCCGCAAGCGAAAGAACCGGAG...AGGTGGAAGCGCCTGCTCTGTGGGTTGGCATGAGATCTGCCCCCATAGAATAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035301.7