Pregenerated sensors for ATP6V1F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004285Ensembl transcript IDs: ENSMUST00000004396.13, ENSMUST00000143101.4, ENSMUST00000149646.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGAGGGGCTGGCACTTAAATAGAGCATaGCAAACCAGGAGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NRTPTAYEPLSEEEGRGWHLNRA*QTRRGL Trigger: CAGGCCTCTCCTGGTTTGCCATGCTCTATTTAAGTG...CCAGCCCCTCCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACTTACGAGCCACTCAGTaGAGAGGAAGGGAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AVEKQLGFLSLPSLDLNNLRATQ*RGREGL Trigger: CAGCCCCTCCCTTCCTCTTCACTGAGTGGCTCGTAA...GTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGAACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGCACTTAAATAGAGCATaGCAAACCAGGAGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DLNNRTPTAYEPLSEEEGHLNRA*QTRRGL Trigger: CAGGCCTCTCCTGGTTTGCCATGCTCTATTTAAGTG...CCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACCTGGAAACCAAGGCTTaGCACTTAAATAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: EAVEKQLGFLSLPSLDLNLETKA*HLNRAW Trigger: CCATGCTCTATTTAAGTGTCAAGCCTTGGTTTCCAG...GTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGACCTGAACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAACTGGAAACCAAGGCTTaGCACTTAAATAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LDLNNRTPTAYEPLSEEELETKA*HLNRAW Trigger: CCATGCTCTATTTAAGTGTCAAGCCTTGGTTTCCAG...TTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTTACGAGCACTTAAATAGAGCATaGCAAACCAGGAGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: FLSLPSLDLNNRTPTAYEHLNRA*QTRRGL Trigger: CAGGCCTCTCCTGGTTTGCCATGCTCTATTTAAGTG...CTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTTACGAGCTGGAAACCAAGGCTTaGCACTTAAATAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: FLSLPSLDLNNRTPTAYELETKA*HLNRAW Trigger: CCATGCTCTATTTAAGTGTCAAGCCTTGGTTTCCAG...CTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR TCA 90 bp | AGCACAGGGAGGAGGCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCGCAGGTCTTCAGCGGTaGACATGCCCTTGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: STGRRQWRNSWAFFLYPAAGLQR*TCPWPC Trigger: GCAGGGCCAAGGGCATGTTCACCGCTGAAGACCTGC...GGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACTGCCTCCTCCCTGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR TCA 90 bp | GACCTGAACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGGCAGGTCTTCAGCGGTaGACATGCCCTTGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DLNNRTPTAYEPLSEEEGAGLQR*TCPWPC Trigger: GCAGGGCCAAGGGCATGTTCACCGCTGAAGACCTGC...CCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | AACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGAGGGGCGATCTCCAGGACAGCTaGAATGGACCTCTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NNRTPTAYEPLSEEEGRGDLQDS*NGPLVG Trigger: GCCCACCAGAGGTCCATTCCAGCTGTCCTGGAGATC...GCCCCTCCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | AACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGAGGGGCTGGCCCTGCGCAGGATaGAGTCTTTGGCTGCATCGT | + |
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Preference number: 4 (lower is better) Translates to: NNRTPTAYEPLSEEEGRGWPCAG*SLWLHR Trigger: ACGATGCAGCCAAAGACTCCATCCTGCGCAGGGCCA...GCCCCTCCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | GACCTGAACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGTGGCCCTGCGCAGGATaGAGTCTTTGGCTGCATCGT | + |
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Preference number: 4 (lower is better) Translates to: DLNNRTPTAYEPLSEEEGWPCAG*SLWLHR Trigger: ACGATGCAGCCAAAGACTCCATCCTGCGCAGGGCCA...CCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR TCA 90 bp | AGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGGCAGGTCTTCAGCGGTaGACATGCCCTTGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SGETVGLSFSTQPRPEQPAGLQR*TCPWPC Trigger: GCAGGGCCAAGGGCATGTTCACCGCTGAAGACCTGC...CGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR GCA 90 bp | AACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGAGGGGCTGTTTAGAAATTGCCTaGGGTAGGCCGGACCCCACT | + |
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Preference number: 4 (lower is better) Translates to: NNRTPTAYEPLSEEEGRGCLEIA*GRPDPT Trigger: AGTGGGGTCCGGCCTACCGCAGGCAATTTCTAAACA...GCCCCTCCCTTCCTCTTCACTGAGTGGCTCGTAAGCTGTTGGGGTTCGGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143101.4 |
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| CDS-3UTR GCA 90 bp | TTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTTACGAGTGGGCATCCAGGGCGTaGCGAACCATCTCTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: FLSLPSLDLNNRTPTAYEWASRA*RTISAM Trigger: CATCGCAGAGATGGTTCGGCACGCCCTGGATGCCCA...CTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR GCA 90 bp | AGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGTGGGCATCCAGGGCGTaGCGAACCATCTCTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: SGETVGLSFSTQPRPEQPWASRA*RTISAM Trigger: CATCGCAGAGATGGTTCGGCACGCCCTGGATGCCCA...CGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | TTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTCCAGGACAGCTGGAATaGACCTCTGGTGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: LGFLSLPSLDLNNRTPTAPGQLE*TSGGHP Trigger: TGGATGCCCACCAGAGGTCCATTCCAGCTGTCCTGG...AGCTGTTGGGGTTCGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | AGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGCCAGGACAGCTGGAATaGACCTCTGGTGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: SGETVGLSFSTQPRPEQPPGQLE*TSGGHP Trigger: TGGATGCCCACCAGAGGTCCATTCCAGCTGTCCTGG...CGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | GCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACCCAGGACAGCTGGAATaGACCTCTGGTGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: AVEKQLGFLSLPSLDLNNPGQLE*TSGGHP Trigger: TGGATGCCCACCAGAGGTCCATTCCAGCTGTCCTGG...GTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | TTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTTACGAGGATCTCCAGGACAGCTaGAATGGACCTCTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FLSLPSLDLNNRTPTAYEDLQDS*NGPLVG Trigger: GCCCACCAGAGGTCCATTCCAGCTGTCCTGGAGATC...CTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR CCA 90 bp | GCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACTGGCCCTGCGCAGGATaGAGTCTTTGGCTGCATCGT | + |
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Preference number: 4 (lower is better) Translates to: AVEKQLGFLSLPSLDLNNWPCAG*SLWLHR Trigger: ACGATGCAGCCAAAGACTCCATCCTGCGCAGGGCCA...GTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004396.13 ENSMUST00000143101.4 ENSMUST00000149646.3 |
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| CDS-3UTR GCA 90 bp | GCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACTCCCTGTTTAGAAATTaGCTGAAAGTGTCTTCGATC | + |
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Preference number: 4 (lower is better) Translates to: AVEKQLGFLSLPSLDLNNSLFRN*LKVSSI Trigger: GATCGAAGACACTTTCAGGCAATTTCTAAACAGGGA...GTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAAGCCCAACTGTTTCTCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004396.13 |
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| CDS-3UTR TCA 90 bp | TTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTTACGAGTGTTTAGAAATTGCCTaGAAGTGTCTTCGATCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FLSLPSLDLNNRTPTAYECLEIA*KCLRSH Trigger: ATGAGATCGAAGACACTTTCAGGCAATTTCTAAACA...CTCGTAAGCTGTTGGGGTTCGGTTGTTCAGGTCTAGGCTGGGTAGAGAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004396.13 |
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