Pregenerated sensors for ATP6V1E2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053375Ensembl transcript IDs: ENSMUST00000065758.8, ENSMUST00000233995.2, ENSMUST00000235110.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAGCAGACTCCACCAGGTaGAGGTCCTGTGGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRADSTR*RSCGRQ Trigger: CTGCCGGCCACAGGACCTCCACCTGGTGGAGTCTGC...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAGCAGACTCCACCAGGTaGAGGTCCTGTGGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGADSTR*RSCGRQ Trigger: CTGCCGGCCACAGGACCTCCACCTGGTGGAGTCTGC...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CCA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGACAGGTGGAGGTCCTGTaGCCGGCAGCGGACAATCAT | + |
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Preference number: 4 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRQVEVL*PAADNH Trigger: ATGATTGTCCGCTGCCGGCCACAGGACCTCCACCTG...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGACAGGTGGAGGTCCTGTaGCCGGCAGCGGACAATCAT | + |
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Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGQVEVL*PAADNH Trigger: ATGATTGTCCGCTGCCGGCCACAGGACCTCCACCTG...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAGGCCCTTCTCAATGTTaGACTCTTCCTCCGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRGPSQC*TLPPPW Trigger: CCAAGGCGGAGGAAGAGTTCAACATTGAGAAGGGCC...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR TCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAGGCCCTTCTCAATGTTaGACTCTTCCTCCGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGGPSQC*TLPPPW Trigger: CCAAGGCGGAGGAAGAGTTCAACATTGAGAAGGGCC...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAACCTGTACCTCCAAATaGTTCTGGCAGAGCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRTCTSK*FWQSLM Trigger: CATGAGGCTCTGCCAGAAGCATTTGGAGGTACAGGT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAATGAACGCCATCATGTaGTTGATCTGCTTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRMNAIM*LICFCT Trigger: CGTGCAGAAGCAGATCAAGCACATGATGGCGTTCAT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGATTATTTTCTGATCGCTaGTGTAGACCTCCACCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRLFSDR*CRPPPL Trigger: GAGGGGTGGAGGTCTACAGCAGCGATCAGAAAATAA...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR GCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAATGAACGCCATCATGTaGTTGATCTGCTTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGMNAIM*LICFCT Trigger: CGTGCAGAAGCAGATCAAGCACATGATGGCGTTCAT...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGACTCATGGTGGACAGCTaGATCTTTTTCTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGLMVDS*IFFCCS Trigger: TGAGCAGCAGAAAAAGATCCAGCTGTCCACCATGAG...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAGAGCCTGGTTTCTCATaGTGGACAGCTGGATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGEPGFS*WTAGSF Trigger: AAAAGATCCAGCTGTCCACCATGAGAAACCAGGCTC...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR TCA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCACGCCATCATGTGCTTaGTCTGCTTCTGCACGTCTA | + |
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Preference number: 4 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGTPSCA*SASARL Trigger: TAGACGTGCAGAAGCAGATCAAGCACATGATGGCGT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR TCA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGATCTCAAAATAATCCATaGTCTTCAGCCGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGSQNNP*SSAAGS Trigger: AGACCCAGCGGCTGAAGATCATGGATTATTTTGAGA...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR GCA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCACCTGTACCTCCAAATaGTTCTGGCAGAGCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGTCTSK*FWQSLM Trigger: CATGAGGCTCTGCCAGAAGCATTTGGAGGTACAGGT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CCA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCCTCATGGTGGACAGCTaGATCTTTTTCTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGLMVDS*IFFCCS Trigger: TGAGCAGCAGAAAAAGATCCAGCTGTCCACCATGAG...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR TCA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTCTCAAAATAATCCATaGTCTTCAGCCGCTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGSQNNP*SSAAGS Trigger: AGACCCAGCGGCTGAAGATCATGGATTATTTTGAGA...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAACTCTTCCTCCGCCTaGGCGTCTATCTCCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGNSSSA*ASISSA Trigger: GGCGGAGGAGATAGACGCCAAGGCGGAGGAAGAGTT...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGATCCTCCGCCTTCTCGTaGGCTTCCTGCTCGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGSSAFS*ASCSMN Trigger: GTTCATCGAGCAGGAAGCCAACGAGAAGGCGGAGGA...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGACGGCCCTTCTCAATGTaGAACTCTTCCTCCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRRPFSM*NSSSAL Trigger: CAAGGCGGAGGAAGAGTTCAACATTGAGAAGGGCCG...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAACCCCTCCAGCAGCATaGGAAGGCAAGTGTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRTPPAA*EGKCSV Trigger: AACTGAACACTTGCCTTCCAATGCTGCTGGAGGGGT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAAACGCCATCATGTGCTaGATCTGCTTCTGCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRNAIMC*ICFCTS Trigger: AGACGTGCAGAAGCAGATCAAGCACATGATGGCGTT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTCCTCCGCCTTCTCGTaGGCTTCCTGCTCGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGSSAFS*ASCSMN Trigger: GTTCATCGAGCAGGAAGCCAACGAGAAGGCGGAGGA...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGACTGCTGAGCCTCATCTaGGCATCCTTGAGCAATTCT | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRLLSLI*ASLSNS Trigger: AGAATTGCTCAAGGATGCCAAGATGAGGCTCAGCAG...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCCGGCCCTTCTCAATGTaGAACTCTTCCTCCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGRPFSM*NSSSAL Trigger: CAAGGCGGAGGAAGAGTTCAACATTGAGAAGGGCCG...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAAATTCTAAGATGAGATaGTCTCGGGCTCTCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRNSKMR*SRALRT Trigger: GGTCCTGAGAGCCCGAGACAATCTCATCTTAGAATT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAAGGCAAGTGTTCAGTTaGGTCAACCTGTACCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRRQVFS*VNLYLQ Trigger: TTGGAGGTACAGGTTGACCAAACTGAACACTTGCCT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCACCCCTCCAGCAGCATaGGAAGGCAAGTGTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGTPPAA*EGKCSV Trigger: AACTGAACACTTGCCTTCCAATGCTGCTGGAGGGGT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGAAACTTTCTGCTGGTGTaGTCTCCAAACAGAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRNFLLV*SPNRIP Trigger: AGGGATTCTGTTTGGAGACAACACCAGCAGAAAGTT...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCAACGCCATCATGTGCTaGATCTGCTTCTGCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGNAIMC*ICFCTS Trigger: AGACGTGCAGAAGCAGATCAAGCACATGATGGCGTT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGAAGACTCATCTTGGCATCCTaGAGCAATTCTAAGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: TVYNTLSYSKLGKGCRGRLILAS*SNSKMR Trigger: TCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAG...TCTTCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCCTGCTGAGCCTCATCTaGGCATCCTTGAGCAATTCT | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGLLSLI*ASLSNS Trigger: AGAATTGCTCAAGGATGCCAAGATGAGGCTCAGCAG...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCAATTCTAAGATGAGATaGTCTCGGGCTCTCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGNSKMR*SRALRT Trigger: GGTCCTGAGAGCCCGAGACAATCTCATCTTAGAATT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | TTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCTGCAGAGGACTCATCTTGGCATCCTaGAGCAATTCTAAGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: LTVYNTLSYSKLGKGCRGLILAS*SNSKMR Trigger: TCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAG...TCCTCTGCAGCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCAGGCAAGTGTTCAGTTaGGTCAACCTGTACCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGRQVFS*VNLYLQ Trigger: TTGGAGGTACAGGTTGACCAAACTGAACACTTGCCT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCAACTTTCTGCTGGTGTaGTCTCCAAACAGAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGNFLLV*SPNRIP Trigger: AGGGATTCTGTTTGGAGACAACACCAGCAGAAAGTT...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGTTAACAGTGTATAACACTCTTAGCTATTCAAAGCTAGGAAAGGGCCTCATCTTGGCATCCTaGAGCAATTCTAAGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: IPKLTVYNTLSYSKLGKGLILAS*SNSKMR Trigger: TCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAG...GCCCTTTCCTAGCTTTGAATAGCTAAGAGTGTTATACACTGTTAACTTTGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS TCA 72 bp | GCCGCTGGGTCTGCACCAGGCGGCCCTTCTCAATGTTaGACTCTTCCTCCGCCTTGGCGTCTATCTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: AAGSAPGGPSQC*TLPPPWRLSPP Trigger: CGGAGGAGATAGACGCCAAGGCGGAGGAAGAGTTCAACATTGAGAAGGGCCGCCTGGTGCAGACCCAGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CAA 90 bp | CCGGCAGCGGACAATCATCACAGGCTCCAGCAGCCGGAGCAAGGCTaGGAGCACGAGCTTATCCAGCAGGTCCTGGTAGATTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PAADNHHRLQQPEQG*EHELIQQVLVDFFI Trigger: GATGAAGAAATCTACCAGGACCTGCTGGATAAGCTCGTGCTCCAAGCCTTGCTCCGGCTGCTGGAGCCTGTGATGATTGTCCGCTGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CCA 72 bp | AGATTGTCTCGGGCTCTCAGGACCGTGATGCGAGCCTaGTTTCTCATGGTGGACAGCTGGATCTTTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RLSRALRTVMRA*FLMVDSWIFFC Trigger: GCAGAAAAAGATCCAGCTGTCCACCATGAGAAACCAGGCTCGCATCACGGTCCTGAGAGCCCGAGACAATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CCA 72 bp | ACCCCTCCAGCAGCATTGGAAGGCAAGTGTTCAGTTTaGTCAACCTGTACCTCCAAATGCTTCTGGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TPPAALEGKCSV*STCTSKCFWQS Trigger: GCTCTGCCAGAAGCATTTGGAGGTACAGGTTGACCAAACTGAACACTTGCCTTCCAATGCTGCTGGAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CCA 72 bp | GCTGGTGTTGTCTCCAAACAGAATCCCTCGTATTTCTaGCATCTTCTGCATGGCCGCGAGATTCAGCCGACT | + |
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Preference number: 6 (lower is better) Translates to: AGVVSKQNPSYF*HLLHGREIQPT Trigger: AGTCGGCTGAATCTCGCGGCCATGCAGAAGATGCCAGAAATACGAGGGATTCTGTTTGGAGACAACACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CAA 72 bp | CTCATCTTGGCATCCTTGAGCAATTCTAAGATGAGATaGTCTCGGGCTCTCAGGACCGTGATGCGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LILASLSNSKMR*SRALRTVMRAW Trigger: CCAGGCTCGCATCACGGTCCTGAGAGCCCGAGACAATCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CAA 72 bp | TCCGACACAATTCTGCTGAGCCTCATCTTGGCATCCTaGAGCAATTCTAAGATGAGATTGTCTCGGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SDTILLSLILAS*SNSKMRLSRAL Trigger: GAGAGCCCGAGACAATCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAGGCTCAGCAGAATTGTGTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CAA 90 bp | ATTTCTTCATCCGACACAATTCTGCTGAGCCTCATCTTGGCATCCTaGAGCAATTCTAAGATGAGATTGTCTCGGGCTCTCAGGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: ISSSDTILLSLILAS*SNSKMRLSRALRTV Trigger: CACGGTCCTGAGAGCCCGAGACAATCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAGGCTCAGCAGAATTGTGTCGGATGAAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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| CDS CAA 72 bp | ATTTCTTCATCCGACACAATTCTGCTGAGCCTCATCTaGGCATCCTTGAGCAATTCTAAGATGAGATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ISSSDTILLSLI*ASLSNSKMRLS Trigger: AGACAATCTCATCTTAGAATTGCTCAAGGATGCCAAGATGAGGCTCAGCAGAATTGTGTCGGATGAAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065758.8 ENSMUST00000233995.2 ENSMUST00000235110.2 |
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