Pregenerated sensors for ATP6V1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021114Ensembl transcript IDs: ENSMUST00000021536.9
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTTAGGAGGCTGCAGCAGGAGGATGCTGAGCGCCAGACCACCTaGAGCACAGTAAGACGGTCTCTCAATAGGAAATCATCTGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: ALRRLQQEDAERQTT*STVRRSLNRKSSVS Trigger: ACTTACAGATGATTTCCTATTGAGAGACCGTCTTACTGTGCTCCAGGTGGTCTGGCGCTCAGCATCCTCCTGCTGCAGCCTCCTAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 90 bp | CTCGGACAACAGCGGCAAGGTTTCCAAGTGGGTAGGAAGGAAGGTTaGTCACAGCCTTTGCCTGCGACCATGAATGTTTATAGTACATAT | + |
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Preference number: 1 (lower is better) Translates to: LGQQRQGFQVGRKEG*SQPLPATMNVYSTY Trigger: ATATGTACTATAAACATTCATGGTCGCAGGCAAAGGCTGTGAGCAACCTTCCTTCCTACCCACTTGGAAACCTTGCCGCTGTTGTCCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 90 bp | ATCCCTATAGATAAGAACAACCCAGAAGTGCATGCTTATAATTCCTaGATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: IPIDKNNPEVHAYNS*MGMPETDPCSLLAC Trigger: GCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAATTATAAGCATGCACTTCTGGGTTGTTCTTATCTATAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CCA 90 bp | AGGTCACTGCACAGTTCACATGAGTCAGTTTTTCTTTTCATCATGTaGGTCCCAGGATGGAACTTAAGTTGTGGGATTGAGCCATCTCAC | + |
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Preference number: 1 (lower is better) Translates to: RSLHSSHESVFLFIM*VPGWNLSCGIEPSH Trigger: GTGAGATGGCTCAATCCCACAACTTAAGTTCCATCCTGGGACCCACATGATGAAAAGAAAAACTGACTCATGTGAACTGTGCAGTGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR TCA 90 bp | TTACTGTGTGGTGTGTATATGCCACAGGTCACTGCACAGTTCACATaGGTCAGTTTTTCTTTTCATCATGTGGGTCCCAGGATGGAACTT | + |
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Preference number: 1 (lower is better) Translates to: LLCGVYMPQVTAQFT*VSFSFHHVGPRMEL Trigger: AAGTTCCATCCTGGGACCCACATGATGAAAAGAAAAACTGACTCATGTGAACTGTGCAGTGACCTGTGGCATATACACACCACACAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CCA 90 bp | CTCTGCCTCCTGAGTGCTGGGATTAAAGACATGCACCACCACCTCTaGCCTTTACAAGTATTGAAAATAGCCAATTTAAAGTTGTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: LCLLSAGIKDMHHHL*PLQVLKIANLKLLA Trigger: TGCTAACAACTTTAAATTGGCTATTTTCAATACTTGTAAAGGCCAGAGGTGGTGGTGCATGTCTTTAATCCCAGCACTCAGGAGGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 90 bp | GAACAATTCATTGTTACTGTGTGGTGTGTATATGCCACAGGTCACTaGACAGTTCACATGAGTCAGTTTTTCTTTTCATCATGTGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: EQFIVTVWCVYATGH*TVHMSQFFFSSCGS Trigger: GGACCCACATGATGAAAAGAAAAACTGACTCATGTGAACTGTGCAGTGACCTGTGGCATATACACACCACACAGTAACAATGAATTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGCATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGCTAGTCTTGCTGGGCAGGTTTTaGAAATCTCGGGTTGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: FLHGNARDRSLQLVSLLVLLGRF*KSRVAE Trigger: TTCAGCAACCCGAGATTTGCAAAACCTGCCCAGCAA...GACTAGCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTGAGATGTCTGCCCCTAAATCCCAACTGCAGTTCTATCCTGGGAATACAGGCAAGGTTTCCAAGTaGGTAGGAAGGAAGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSEMSAPKSQLQFYPGNTGKVSK*VGRKVA Trigger: AGCAACCTTCCTTCCTACCCACTTGGAAACCTTGCC...TGTATTCCCAGGATAGAACTGCAGTTGGGATTTAGGGGCAGACATCTCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGCTAGTCACATATTTTTGGACTTaGGGTGTGTTTAGCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLHGNARDRSLQLVSLLVTYFWT*GVFSMR Trigger: TCTCATGCTAAACACACCCCAAGTCCAAAAATATGT...GACTAGCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 90 bp | CGGCAAGGTTTCCAAGTGGGTAGGAAGGAAGGTTGCTCACAGCCTTaGCCTGCGACCATGAATGTTTATAGTACATATTTCCTAAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: RQGFQVGRKEGCSQP*PATMNVYSTYFLKF Trigger: AAACTTTAGGAAATATGTACTATAAACATTCATGGTCGCAGGCAAAGGCTGTGAGCAACCTTCCTTCCTACCCACTTGGAAACCTTGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 90 bp | CTTCCATTACAAACACATATCGTGCAAAGAAAAATAGGTGAAGAATaGAGCCATAGGAACACAATGGCTGTACAGCCTCGGACAACAGCG | + |
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Preference number: 2 (lower is better) Translates to: LPLQTHIVQRKIGEE*SHRNTMAVQPRTTA Trigger: CGCTGTTGTCCGAGGCTGTACAGCCATTGTGTTCCTATGGCTCAATTCTTCACCTATTTTTCTTTGCACGATATGTGTTTGTAATGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 90 bp | AGAGGAAATTCTGTAGGTTGCTGGGCAGGTTTTGCAAATCTCGGGTaGCTGAATTATGATGCAGGAAAAAGTCTTACAAGGCATTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: RGNSVGCWAGFANLG*LNYDAGKSLTRHSD Trigger: ATCAGAATGCCTTGTAAGACTTTTTCCTGCATCATAATTCAGCAACCCGAGATTTGCAAAACCTGCCCAGCAACCTACAGAATTTCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAGAACACACAGAACTGGTTACACTAAAGTCTGAGTACTCACAGATAATCCGGGTTGCTGAATTATaGTGCAGGAAAAAGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: SPEHTELVTLKSEYSQIIRVAEL*CRKKSY Trigger: GTAAGACTTTTTCCTGCATCATAATTCAGCAACCCG...GATTATCTGTGAGTACTCAGACTTTAGTGTAACCAGTTCTGTGTGTTCTGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTAATTTAAAAGCAATTAAGCTCCCCGTGTCTCAAGTCTTTCTTTCCTCTAACCAAGAACTGTCTTaGCCAGGCAAGCCCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: SFNLKAIKLPVSQVFLSSNQELS*PGKPRT Trigger: TGTTCTGGGCTTGCCTGGGCAAGACAGTTCTTGGTT...AGAGGAAAGAAAGACTTGAGACACGGGGAGCTTAATTGCTTTTAAATTAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 90 bp | AATGGTACAATTAACACCTCACAAAGTAACTTGCTGAACAATTCATaGTTACTGTGTGGTGTGTATATGCCACAGGTCACTGCACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NGTINTSQSNLLNNS*LLCGVYMPQVTAQF Trigger: GAACTGTGCAGTGACCTGTGGCATATACACACCACACAGTAACAATGAATTGTTCAGCAAGTTACTTTGTGAGGTGTTAATTGTACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTAATTTAAAAGCAATTAAGCTCCCCGTGTCTCAAGTCTTTCTTTCCTCTAATTCTGTAGGTTGCTaGGCAGGTTTTGCAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: SFNLKAIKLPVSQVFLSSNSVGC*AGFANL Trigger: GAGATTTGCAAAACCTGCCCAGCAACCTACAGAATT...AGAGGAAAGAAAGACTTGAGACACGGGGAGCTTAATTGCTTTTAAATTAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTAATTTAAAAGCAATTAAGCTCCCCGTGTCTCAAGTCTTTCTTTCCTCTCTTTGCCTGCGACCATaGATGTTTATAGTACATATT | + |
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Preference number: 2 (lower is better) Translates to: SFNLKAIKLPVSQVFLSSLCLRP*MFIVHI Trigger: AATATGTACTATAAACATTCATGGTCGCAGGCAAAG...AGAGGAAAGAAAGACTTGAGACACGGGGAGCTTAATTGCTTTTAAATTAAAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR GCA 90 bp | TGGATCAGCTCACTTCCACTCCCAGAACTCAATAATATTTACCCACTATTTAATTTAAATGGGCAGAACTaGTTCCATTACAAACACATA | + |
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Preference number: 2 (lower is better) Translates to: WISSLPLPELNNIYPLFNLNGQN*FHYKHI Trigger: TATGTGTTTGTAATGGAAGCAGTTCTGCCCATTTAA...ATTAAATAGTGGGTAAATATTATTGAGTTCTGGGAGTGGAAGTGAGCTGATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAGCTCACTTCCACTCCCAGAACTCAATAATATTTACCCACTATTTAATCTTTCCTCTACGGAATaGGCTAAAACACATATTTTT | + |
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Preference number: 2 (lower is better) Translates to: WISSLPLPELNNIYPLFNLSSTE*AKTHIF Trigger: AAAAATATGTGTTTTAGCCCATTCCGTAGAGGAAAG...ATTAAATAGTGGGTAAATATTATTGAGTTCTGGGAGTGGAAGTGAGCTGATCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CCA 72 bp | TGTACAGCCTCGGACAACAGCGGCAAGGTTTCCAAGTaGGTAGGAAGGAAGGTTGCTCACAGCCTTTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: CTASDNSGKVSK*VGRKVAHSLCL Trigger: CAGGCAAAGGCTGTGAGCAACCTTCCTTCCTACCCACTTGGAAACCTTGCCGCTGTTGTCCGAGGCTGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CCA 72 bp | AGGCTGCAGCAGGAGGATGCTGAGCGCCAGACCACCTaGAGCACAGTAAGACGGTCTCTCAATAGGAAATCA | + |
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Preference number: 3 (lower is better) Translates to: RLQQEDAERQTT*STVRRSLNRKS Trigger: TGATTTCCTATTGAGAGACCGTCTTACTGTGCTCCAGGTGGTCTGGCGCTCAGCATCCTCCTGCTGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 72 bp | CAGCGGCAAGGTTTCCAAGTGGGTAGGAAGGAAGGTTaGTCACAGCCTTTGCCTGCGACCATGAATGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: QRQGFQVGRKEG*SQPLPATMNVY Trigger: ATAAACATTCATGGTCGCAGGCAAAGGCTGTGAGCAACCTTCCTTCCTACCCACTTGGAAACCTTGCCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR CAA 90 bp | GTCAGTGAGATGTCTGCCCCTAAATCCCAACTGCAGTTCTATCCTGGGAATACAAGGAAATTCTGTAGGTaGCTGGGCAGGTTTTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: VSEMSAPKSQLQFYPGNTRKFCR*LGRFCK Trigger: TTTGCAAAACCTGCCCAGCAACCTACAGAATTTCCT...TGTATTCCCAGGATAGAACTGCAGTTGGGATTTAGGGGCAGACATCTCACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR TCA 72 bp | GGTGTGTATATGCCACAGGTCACTGCACAGTTCACATaGGTCAGTTTTTCTTTTCATCATGTGGGTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GVYMPQVTAQFT*VSFSFHHVGPR Trigger: CCTGGGACCCACATGATGAAAAGAAAAACTGACTCATGTGAACTGTGCAGTGACCTGTGGCATATACACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 72 bp | GATAAGAACAACCCAGAAGTGCATGCTTATAATTCCTaGATGGGAATGCCAGAGACAGATCCCTGCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: DKNNPEVHAYNS*MGMPETDPCSL Trigger: CAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAATTATAAGCATGCACTTCTGGGTTGTTCTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CCA 72 bp | CACAGTTCACATGAGTCAGTTTTTCTTTTCATCATGTaGGTCCCAGGATGGAACTTAAGTTGTGGGATTGAG | + |
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Preference number: 3 (lower is better) Translates to: HSSHESVFLFIM*VPGWNLSCGIE Trigger: CTCAATCCCACAACTTAAGTTCCATCCTGGGACCCACATGATGAAAAGAAAAACTGACTCATGTGAACTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CCA 72 bp | GTATATGTGAACTTGACATTTTCTGTGAGCTACATCTaGTTTCTTACAAATCAGATCCTCCCCCACCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: VYVNLTFSVSYI*FLTNQILPHPE Trigger: TTCTGGGTGGGGGAGGATCTGATTTGTAAGAAACCAGATGTAGCTCACAGAAAATGTCAAGTTCACATATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR TCA 72 bp | AAGCCCAGAACACACAGAACTGGTTACACTAAAGTCTaGGTACTCACAGATAATCAGGCCAAATTAAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: KPRTHRTGYTKV*VLTDNQAKLSN Trigger: ATTGCTTAATTTGGCCTGATTATCTGTGAGTACTCAGACTTTAGTGTAACCAGTTCTGTGTGTTCTGGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR TCA 72 bp | GGACAGTTTAAGCACCAGAGCTTTACTGCAGCTACATaGGAAATTAAAATGCCTTTGGTCCAATGCTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: GQFKHQSFTAAT*EIKMPLVQCFQ Trigger: TTGAAAGCATTGGACCAAAGGCATTTTAATTTCTCATGTAGCTGCAGTAAAGCTCTGGTGCTTAAACTGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 72 bp | ATTGTTACTGTGTGGTGTGTATATGCCACAGGTCACTaGACAGTTCACATGAGTCAGTTTTTCTTTTCATCA | + |
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Preference number: 3 (lower is better) Translates to: IVTVWCVYATGH*TVHMSQFFFSS Trigger: TGATGAAAAGAAAAACTGACTCATGTGAACTGTGCAGTGACCTGTGGCATATACACACCACACAGTAACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR-3UTR CAA 90 bp | AGCTTTAATTTAAAAGCAATTAAGCTCCCCGTGTCTCAAGTCTTTCTTTCCTCTAAAATAGGTGAAGAATaGAGCCATAGGAACACAATG | + |
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Preference number: 3 (lower is better) Translates to: SFNLKAIKLPVSQVFLSSKIGEE*SHRNTM Trigger: CATTGTGTTCCTATGGCTCAATTCTTCACCTATTTT...AGAGGAAAGAAAGACTTGAGACACGGGGAGCTTAATTGCTTTTAAATTAAAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR TCA 72 bp | GAAATGGTACAATTAACACCTCACAAAGTAACTTGCTaGACAATTCATTGTTACTGTGTGGTGTGTATATGC | + |
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Preference number: 3 (lower is better) Translates to: EMVQLTPHKVTC*TIHCYCVVCIC Trigger: GCATATACACACCACACAGTAACAATGAATTGTTCAGCAAGTTACTTTGTGAGGTGTTAATTGTACCATTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 72 bp | TACTCTGTTCATAGGTCACATTTAAATGGGCAGAACTaGTTCCATTACAAACACATATCGTGCAAAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: YSVHRSHLNGQN*FHYKHISCKEK Trigger: TTTTTCTTTGCACGATATGTGTTTGTAATGGAAGCAGTTCTGCCCATTTAAATGTGACCTATGAACAGAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR GCA 72 bp | AATCAAGATCCCCTGGACTTGGATTCATTCCACCTATaGTATTTAACTTATATAAGCTGTTCAATTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: NQDPLDLDSFHL*YLTYISCSISP Trigger: TGGAGAAATTGAACAGCTTATATAAGTTAAATAGCATAGGTGGAATGAATCCAAGTCCAGGGGATCTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR TCA 90 bp | TTCCTGCATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGCTAGTCTTAATCGAGCCTTCATaGTGGTCTGTGCCATTCGCG | + |
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Preference number: 4 (lower is better) Translates to: FLHGNARDRSLQLVSLLVLIEPS*WSVPFA Trigger: CGCGAATGGCACAGACCATCATGAAGGCTCGATTAA...GACTAGCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CCA 90 bp | GTCAGTGAGATGTCTGCCCCTAAATCCCAACTGCAGTTCTATCCTGGGAATACAGCTGCTCCCCACCTCTaGCTAAACCGGTCAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VSEMSAPKSQLQFYPGNTAAPHL*LNRSVH Trigger: ATGAACTGACCGGTTTAGCCAGAGGTGGGGAGCAGC...TGTATTCCCAGGATAGAACTGCAGTTGGGATTTAGGGGCAGACATCTCACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR GCA 90 bp | AGCCCAGAACACACAGAACTGGTTACACTAAAGTCTGAGTACTCACAGATAATCCATCACCTCTCCAGCTaGTCTCCGCCGCTCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPEHTELVTLKSEYSQIIHHLSS*SPPLQV Trigger: GACTTGGAGCGGCGGAGAGCAGCTGGAGAGGTGATG...GATTATCTGTGAGTACTCAGACTTTAGTGTAACCAGTTCTGTGTGTTCTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CCA 90 bp | TTCCTGCATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGCTAGTCGTAGTTCCACTGCTTTaGCATAATTCCGCTTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: FLHGNARDRSLQLVSLLVVVPLL*HNSALV Trigger: AACTAAAGCGGAATTATGCCAAAGCAGTGGAACTAC...GACTAGCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR GCA 90 bp | TGCCAAAATAAATATCCACACATACCGAACCTACACACTGAGTTAACATGGAGCGTAACAAAGGAAGTCTaGAGGGAAGCCAGTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: CQNKYPHIPNLHTELTWSVTKEV*REASST Trigger: GGTGGAACTGGCTTCCCTGCAGACTTCCTTTGTTAC...GCTCCATGTTAACTCAGTGTGTAGGTTCGGTATGTGTGGATATTTATTTTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 72 bp | TTCCAAGTGGGTAGGAAGGAAGGTTGCTCACAGCCTTaGCCTGCGACCATGAATGTTTATAGTACATATTTC | + |
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Preference number: 4 (lower is better) Translates to: FQVGRKEGCSQP*PATMNVYSTYF Trigger: GAAATATGTACTATAAACATTCATGGTCGCAGGCAAAGGCTGTGAGCAACCTTCCTTCCTACCCACTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR GCA 90 bp | TGCCAAAATAAATATCCACACATACCGAACCTACACACTGAGTTAACATGGAGCTTTAGTTTAGCCAGCTaGTCCCCACCTCTGGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: CQNKYPHIPNLHTELTWSFSLAS*SPPLAK Trigger: TTTAGCCAGAGGTGGGGAGCAGCTGGCTAAACTAAA...GCTCCATGTTAACTCAGTGTGTAGGTTCGGTATGTGTGGATATTTATTTTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 72 bp | CAAACACATATCGTGCAAAGAAAAATAGGTGAAGAATaGAGCCATAGGAACACAATGGCTGTACAGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QTHIVQRKIGEE*SHRNTMAVQPR Trigger: CCGAGGCTGTACAGCCATTGTGTTCCTATGGCTCAATTCTTCACCTATTTTTCTTTGCACGATATGTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR TCA 90 bp | AGCCCAGAACACACAGAACTGGTTACACTAAAGTCTGAGTACTCACAGATAATCTGTCTTTCTTTGCTCTaGTCTTCACTTGGGCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: SPEHTELVTLKSEYSQIICLSLL*SSLGLY Trigger: ATAAAGCCCAAGTGAAGATCAGAGCAAAGAAAGACA...GATTATCTGTGAGTACTCAGACTTTAGTGTAACCAGTTCTGTGTGTTCTGGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR GCA 90 bp | TGCCAAAATAAATATCCACACATACCGAACCTACACACTGAGTTAACATGGAGCTGGCAAGGTAACACCTaGTACATTGTCTTTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CQNKYPHIPNLHTELTWSWQGNT*YIVFLC Trigger: GCAAAGAAAGACAATGTAGCAGGTGTTACCTTGCCA...GCTCCATGTTAACTCAGTGTGTAGGTTCGGTATGTGTGGATATTTATTTTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR GCA 90 bp | TGCCAAAATAAATATCCACACATACCGAACCTACACACTGAGTTAACATGGAGCTACATTGTCTTTCTTTaGTCTGATCTTCACTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: CQNKYPHIPNLHTELTWSYIVFL*SDLHLG Trigger: GCCCAAGTGAAGATCAGAGCAAAGAAAGACAATGTA...GCTCCATGTTAACTCAGTGTGTAGGTTCGGTATGTGTGGATATTTATTTTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CCA 90 bp | AGCCCAGAACACACAGAACTGGTTACACTAAAGTCTGAGTACTCACAGATAATCGCTTTATTTACATTTTaGATAACTGTGGTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPEHTELVTLKSEYSQIIALFTF*ITVVLK Trigger: CTTCAGCACCACAGTTATCCAAAATGTAAATAAAGC...GATTATCTGTGAGTACTCAGACTTTAGTGTAACCAGTTCTGTGTGTTCTGGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CCA 90 bp | AGCTTTAATTTAAAAGCAATTAAGCTCCCCGTGTCTCAAGTCTTTCTTTCCTCTGTAATGTTCAAACACTaGCAAGGTAACACCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SFNLKAIKLPVSQVFLSSVMFKH*QGNTCY Trigger: GTAGCAGGTGTTACCTTGCCAGTGTTTGAACATTAC...AGAGGAAAGAAAGACTTGAGACACGGGGAGCTTAATTGCTTTTAAATTAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| 3UTR CAA 72 bp | ATTAACACCTCACAAAGTAACTTGCTGAACAATTCATaGTTACTGTGTGGTGTGTATATGCCACAGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: INTSQSNLLNNS*LLCGVYMPQVT Trigger: AGTGACCTGTGGCATATACACACCACACAGTAACAATGAATTGTTCAGCAAGTTACTTTGTGAGGTGTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS TCA 90 bp | AACTGTGGTGCTGAAGTCCCCTGCTGTGAATTTGGCCTCAGCCAATaGGAAGGCAGCTTCTCTCATCACTTCACCCATCAGCATTTTAGT | + |
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Preference number: 5 (lower is better) Translates to: NCGAEVPCCEFGLSQ*EGSFSHHFTHQHFS Trigger: ACTAAAATGCTGATGGGTGAAGTGATGAGAGAAGCTGCCTTCTCATTGGCTGAGGCCAAATTCACAGCAGGGGACTTCAGCACCACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CAA 90 bp | TTCCTGCATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGCTAGTCGTAACACCTGCTACATaGTCTTTCTTTGCTCTGATC | + |
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Preference number: 5 (lower is better) Translates to: FLHGNARDRSLQLVSLLVVTPAT*SFFALI Trigger: GATCAGAGCAAAGAAAGACAATGTAGCAGGTGTTAC...GACTAGCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CAA 90 bp | TTCCTGCATGGGAATGCCAGAGACAGATCCCTGCAGCTTGTTAGCCTGCTAGTCGCATTAACACGCCTGTaGGTGATTTTAATGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FLHGNARDRSLQLVSLLVALTRL*VILMAS Trigger: TGAAGCCATTAAAATCACCAACAGGCGTGTTAATGC...GACTAGCAGGCTAACAAGCTGCAGGGATCTGTCTCTGGCATTCCCATGCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CAA 90 bp | TGCCAAAATAAATATCCACACATACCGAACCTACACACTGAGTTAACATGGAGCTGCTCTGATCTTCACTaGGGCTTTATTTACATTTTG | + |
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Preference number: 5 (lower is better) Translates to: CQNKYPHIPNLHTELTWSCSDLH*GFIYIL Trigger: CAAAATGTAAATAAAGCCCAAGTGAAGATCAGAGCA...GCTCCATGTTAACTCAGTGTGTAGGTTCGGTATGTGTGGATATTTATTTTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCTCACTTCCACTCCCAGAACTCAATAATATTTACCCACTATTTAATGGCTTTATTTACATTTaGGATAACTGTGGTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: WISSLPLPELNNIYPLFNGFIYI*DNCGAE Trigger: TTCAGCACCACAGTTATCCAAAATGTAAATAAAGCC...ATTAAATAGTGGGTAAATATTATTGAGTTCTGGGAGTGGAAGTGAGCTGATCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS TCA 72 bp | GCTGAAGTCCCCTGCTGTGAATTTGGCCTCAGCCAATaGGAAGGCAGCTTCTCTCATCACTTCACCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: AEVPCCEFGLSQ*EGSFSHHFTHQ Trigger: CTGATGGGTGAAGTGATGAGAGAAGCTGCCTTCTCATTGGCTGAGGCCAAATTCACAGCAGGGGACTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS TCA 72 bp | TTCGACCAGTCTGTGCTCCTTTTAATCGAGCCTTCATaGTGGTCTGTGCCATTCGCGAAGGGAAGATTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FDQSVLLLIEPS*WSVPFAKGRFQ Trigger: TTGAAATCTTCCCTTCGCGAATGGCACAGACCATCATGAAGGCTCGATTAAAAGGAGCACAGACTGGTCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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| CDS CAA 90 bp | TCAATCCGGGGAATAATGACATGCTCAATGGCATTAACACGCCTGTaGGTGATTTTAATGGCTTCATCCAGGGTAACAAAGGAAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SIRGIMTCSMALTRL*VILMASSRVTKEVC Trigger: GCAGACTTCCTTTGTTACCCTGGATGAAGCCATTAAAATCACCAACAGGCGTGTTAATGCCATTGAGCATGTCATTATTCCCCGGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021536.9 |
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