Pregenerated sensors for ATP6V1C2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020566Ensembl transcript IDs: ENSMUST00000020884.16, ENSMUST00000095820.12, ENSMUST00000127185.8, ENSMUST00000140751.8, ENSMUST00000143131.2, ENSMUST00000153090.8, ENSMUST00000156727.8, ENSMUST00000221129.2, ENSMUST00000222103.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCACGGATGCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTaGCGGAAGACAGAGTTGAGCACCTCTCTCAGGCGTTTGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: STDASSMLAAATSSR*RKTELSTSLRRLVA Trigger: AGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 90 bp | GAGCTGCAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTTGCTaGAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGAGCACCTC | + |
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Preference number: 1 (lower is better) Translates to: ELQSRNLHGCIQYAC*SNFIQVPEDRVEHL Trigger: GAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTGCAGCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 90 bp | GCTGAGCTGCAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTTaGTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: AELQSRNLHGCIQYA*CSNFIQVPEDRVEH Trigger: GTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTGCAGCTCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 90 bp | GTTGACCGAGGGACCACCATGTCCGATAGGGACTCATATGTCTTCTaGCACTGTGCAAAGCTTGACTTGGGGACGATGACCAGGAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: VDRGTTMSDRDSYVF*HCAKLDLGTMTRRV Trigger: AACCCTCCTGGTCATCGTCCCCAAGTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTCCCTATCGGACATGGTGGTCCCTCGGTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR TCA 90 bp | GTATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTaGGCACCTCTCTCAGGCGTTTGGTGGCTGACTTTTTATGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VCLLQQLHPGAGRQS*APLSGVWWLTFYGA Trigger: AGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CCA 90 bp | CCATACCTGAGCACAGACTCCACAAACACTCTCAGGGCCTTAATGTaGATCCAGGCAATAAAGGCCTCGCTGAAGTTCACCTTGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PYLSTDSTNTLRALM*IQAIKASLKFTLSQ Trigger: CTGGCTCAAGGTGAACTTCAGCGAGGCCTTTATTGCCTGGATCCACATTAAGGCCCTGAGAGTGTTTGTGGAGTCTGTGCTCAGGTATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CAA 90 bp | TCATCCAGGTGCCGGAAGACAGAGTTGAGCACCTCTCTCAGGCGTTaGGTGGCTGACTTTTTATGGGGCTGTAGGAGCACAGCCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SSRCRKTELSTSLRR*VADFLWGCRSTAWK Trigger: CTTCCAGGCTGTGCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CAA 90 bp | AGAGTCACCGTGAAGAGGCCACCTTCGTTGTCCTCGGCGATCAATTaGGTTGACCGAGGGACCACCATGTCCGATAGGGACTCATATGTC | + |
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Preference number: 2 (lower is better) Translates to: RVTVKRPPSLSSAIN*VDRGTTMSDRDSYV Trigger: GACATATGAGTCCCTATCGGACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGACAACGAAGGTGGCCTCTTCACGGTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR TCA 90 bp | TATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGAGCACCTCTTGTCTGGCAAGGTCTaGGGCTGCAGTGAAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: YACCSNFIQVPEDRVEHLLSGKV*GCSETG Trigger: GCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAA...GAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGGTCTGTCTCGATTTGTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCTCCTTGGAATCTTCCATaGCCTCCACCACACTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LQVCLDLCQLLGQCVHHAPWNLP*PPPHSV Trigger: CACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGG...AGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAATCGAGACAGACCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| 3UTR CAA 90 bp | AGTATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTaGAGCACCTCTCTCAGGCGTTTGGTGGCTGACTTTTTATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SMLAAATSSRCRKTE*STSLRRLVADFLWG Trigger: GCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGGCGTTTGGTGGCTGACTTTTTATGGGGCTGTAGGAGCACAGCCTGGACTGGAAGTCCATACCTaGGCACAGACTCCACAAACA | + |
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Preference number: 2 (lower is better) Translates to: LSGVWWLTFYGAVGAQPGLEVHT*AQTPQT Trigger: TGTTTGTGGAGTCTGTGCTCAGGTATGGACTTCCAG...TCCAGGCTGTGCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAATCTCCACGGATGCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGAGCCTGGAAGTTCACTaGAAGTCCATACCTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PGISTDASSMLAAATSSRSLEVH*KSIPEH Trigger: GTGCTCAGGTATGGACTTCCAGTGAACTTCCAGGCT...CCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGCCTCTCTCAGGCGTTTaGTGGCTGACTTTTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: ASSMLAAATSSRCRKTELPLSGV*WLTFYG Trigger: CCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGG...CAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGAGCTGCAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTTGCTGCGACTCATATGTCTTCTaGCACTGTGCAAAGCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: VAELQSRNLHGCIQYACCDSYVF*HCAKLD Trigger: GTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTC...GCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTGCAGCTCAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CCA 90 bp | TATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGAGCACCTCTATCAGACAGCAACCTaGTCATCTCCTCCCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: YACCSNFIQVPEDRVEHLYQTAT*SSPPFL Trigger: GAGAAAGGGAGGAGATGACCAGGTTGCTGTCTGATA...GAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAATCTCCACGGATGCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTCTCAGGGCCTTAATGTaGATCCAGGCAATAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: QESPRMHPVCLLQQLHPGLRALM*IQAIKA Trigger: GGCCTTTATTGCCTGGATCCACATTAAGGCCCTGAG...ACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CAA 90 bp | GCCTTAATGTGGATCCAGGCAATAAAGGCCTCGCTGAAGTTCACCTaGAGCCAGCGCAGCAGAGGTCCATACTGTTGTTTCTTATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: ALMWIQAIKASLKFT*SQRSRGPYCCFLSD Trigger: GTCTGATAAGAAACAACAGTATGGACCTCTGCTGCGCTGGCTCAAGGTGAACTTCAGCGAGGCCTTTATTGCCTGGATCCACATTAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAATCTCCACGGATGCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTTCTGTGATTATCTTCTaGGTCAGAATCCTGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QESPRMHPVCLLQQLHPGSVIIF*VRILQD Trigger: GTCCTGCAGGATTCTGACTCAGAAGATAATCACAGA...ACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTGTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCTCACCAGTGGCTGCTTGTCGTGTGCTTTCCCCTaGGAATCTTCCATGACCTCC | + |
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Preference number: 3 (lower is better) Translates to: ICASCLASVSTTLTSGCLSCAFP*ESSMTS Trigger: GGAGGTCATGGAAGATTCCAAGGGGAAAGCACACGA...CAAGCAGCCACTGGTGAGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| 3UTR TCA 72 bp | TCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTaGGGCTGCAGTGAAACAGGCTGGCCACCTAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: SESCRTRLSGKV*GCSETGWPPSQ Trigger: TTGACTAGGTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 72 bp | GCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTaGCGGAAGACAGAGTTGAGCACCTCTCTCAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: ASSMLAAATSSR*RKTELSTSLRR Trigger: ACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR TCA 72 bp | CTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTaGGCACCTCTCTCAGGCGTTTGGTGGCTGACTTTT | + |
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Preference number: 3 (lower is better) Translates to: LQQLHPGAGRQS*APLSGVWWLTF Trigger: AAAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 72 bp | GGGACCACCATGTCCGATAGGGACTCATATGTCTTCTaGCACTGTGCAAAGCTTGACTTGGGGACGATGACC | + |
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Preference number: 3 (lower is better) Translates to: GTTMSDRDSYVF*HCAKLDLGTMT Trigger: GGTCATCGTCCCCAAGTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTCCCTATCGGACATGGTGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 72 bp | CAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTTaGTGCAGCAACTTCATCCAGGTGCCGGAAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: QSRNLHGCIQYA*CSNFIQVPEDR Trigger: TCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR GCA 72 bp | TCCAGGAATCTCCACGGATGCATCCAGTATGCTTGCTaGAGCAACTTCATCCAGGTGCCGGAAGACAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SRNLHGCIQYAC*SNFIQVPEDRV Trigger: AACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CCA 72 bp | AGCACAGACTCCACAAACACTCTCAGGGCCTTAATGTaGATCCAGGCAATAAAGGCCTCGCTGAAGTTCACC | + |
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Preference number: 3 (lower is better) Translates to: STDSTNTLRALM*IQAIKASLKFT Trigger: GGTGAACTTCAGCGAGGCCTTTATTGCCTGGATCCACATTAAGGCCCTGAGAGTGTTTGTGGAGTCTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CAA 90 bp | CCATACTGTTGTTTCTTATCAGACAGCAACCTGGTCATCTCCTCCCTTTCTCGTCGGCGATCAATTTGGTaGACCGAGGGACCACCATGT | + |
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Preference number: 3 (lower is better) Translates to: PYCCFLSDSNLVISSLSRRRSIW*TEGPPC Trigger: ACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCG...ACGAGAAAGGGAGGAGATGACCAGGTTGCTGTCTGATAAGAAACAACAGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR TCA 72 bp | TATGGAAGTACACATAGGGGAAATAGTCCTGGTTGCTaGGCTGCAGTCCAGGAATCTCCACGGATGCATCCA | + |
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Preference number: 3 (lower is better) Translates to: YGSTHRGNSPGC*AAVQESPRMHP Trigger: TGGATGCATCCGTGGAGATTCCTGGACTGCAGCTCAGCAACCAGGACTATTTCCCCTATGTGTACTTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CAA 90 bp | TGCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTTCCCGGACAATGAACTaGTTTTCTTTGGCTTTGACT | + |
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Preference number: 3 (lower is better) Translates to: CIQYACCSNFIQVPEDRVSRTMN*FSLALT Trigger: AGTCAAAGCCAAAGAAAACAAGTTCATTGTCCGGGA...AACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCACAGACTCCACAAACACTCTCAGGGCCTTAATGTGGATCCAGGCAATAAACAGAGGTCCATACTGTaGTTTCTTATCAGACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: EHRLHKHSQGLNVDPGNKQRSIL*FLIRQQ Trigger: TTGCTGTCTGATAAGAAACAACAGTATGGACCTCTG...TTTATTGCCTGGATCCACATTAAGGCCCTGAGAGTGTTTGTGGAGTCTGTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCGCTCAGTGTCCGAGTaGAGAGGTTCCCCGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGRSVSE*RGSPWI Trigger: GATCCACGGGGAACCTCTTCACTCGGACACTGAGCG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR TCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCGCTCAGTGTCCGAGTaGAGAGGTTCCCCGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHRSVSE*RGSPWI Trigger: GATCCACGGGGAACCTCTTCACTCGGACACTGAGCG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CCA 90 bp | GTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCTCACCAGTGGCTGCTTGGCGGGTTCCTCAGACTTCCTaGCCAACCAACCTCAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: VPVAWPVCPPRSPVAAWRVPQTS*PTNLSD Trigger: GTCGCTGAGGTTGGTTGGCCAGGAAGTCTGAGGAAC...CCGCCAAGCAGCCACTGGTGAGCGTGGTGGACACACTGGCCAAGCAACTGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTCCTGGTTGCTGAGCTaGAGTCCAGGAATCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGSWLLS*SPGIST Trigger: CGTGGAGATTCCTGGACTGCAGCTCAGCAACCAGGA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR GCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACTCCTGGTTGCTGAGCTaGAGTCCAGGAATCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHSWLLS*SPGIST Trigger: CGTGGAGATTCCTGGACTGCAGCTCAGCAACCAGGA...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCCAAAGTCCCCACCTTaGAGTCTGGGATGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGPKSPP*SLGWQT Trigger: AGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR TCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCCAAAGTCCCCACCTTaGAGTCTGGGATGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHPKSPP*SLGWQT Trigger: AGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGTGTGTCCACCACGCTCACCAGTGGCTGCTTGGCGGGATATTTGGCCATCCAAAGTCCCCACCTTaGAGTCTGGGATGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: GQCVHHAHQWLLGGIFGHPKSPP*SLGWQT Trigger: AGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGG...ATGGCCAAATATCCCGCCAAGCAGCCACTGGTGAGCGTGGTGGACACACTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| CDS-3UTR TCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCCTTGGAATCTTCCATaGCCTCCACCACACTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHPWNLP*PPPHSV Trigger: CACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCCTTGGAATCTTCCATaGCCTCCACCACACTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGPWNLP*PPPHSV Trigger: CACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR TCA 90 bp | TGTCCTCGGCGATCAATTTGGTTGACCGAGGGACCACCATGTCCGATAGGGACTCGCTCAGTGTCCGAGTaGAGAGGTTCCCCGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: CPRRSIWLTEGPPCPIGTRSVSE*RGSPWI Trigger: GATCCACGGGGAACCTCTTCACTCGGACACTGAGCG...AGTCCCTATCGGACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| CDS-3UTR GCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCGCAACTTCATCCAGGTaGCGGAAGACAGAGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGATSSR*RKTELS Trigger: GCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGC...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR GCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACGCAACTTCATCCAGGTaGCGGAAGACAGAGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHATSSR*RKTELS Trigger: GCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGC...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTCACCAGTGGCTGCTTaGCGGGATATTTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGSPVAA*RDIWPC Trigger: ACATGGCCAAATATCCCGCCAAGCAGCCACTGGTGA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCCAAGTTCTCCAGGTTaGCCTTCAGAACGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHPSSPG*PSERCR Trigger: CCTACAGCGTTCTGAAGGCCAACCTGGAGAACTTGG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCCAAGTTCTCCAGGTTaGCCTTCAGAACGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGPSSPG*PSERCR Trigger: CCTACAGCGTTCTGAAGGCCAACCTGGAGAACTTGG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCTGGAAGTCCATACCTaGGCACAGACTCCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGLEVHT*AQTPQT Trigger: TGTTTGTGGAGTCTGTGCTCAGGTATGGACTTCCAG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCAATAGTCCTGGTTGCTaGGCTGCAGTCCAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGNSPGC*AAVQES Trigger: AGATTCCTGGACTGCAGCTCAGCAACCAGGACTATT...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACAATAGTCCTGGTTGCTaGGCTGCAGTCCAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHNSPGC*AAVQES Trigger: AGATTCCTGGACTGCAGCTCAGCAACCAGGACTATT...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCTTTCCCCTTGGAATCTTCCATGACCTCCACCACACTCTGTGCCATTCTCACCTCAGCGACTCCGTaGGACAGACCCAGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CAFPLESSMTSTTLCAILTSATP*DRPRSQ Trigger: CTGGGACCTGGGTCTGTCGCACGGAGTCGCTGAGGT...GAGAATGGCACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGGGGAAAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCCCCACCTTGAAGTCTaGGATGGCAAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHPHLEV*DGKLGV Trigger: AACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCTCAGGGCCTTAATGTaGATCCAGGCAATAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGLRALM*IQAIKA Trigger: GGCCTTTATTGCCTGGATCCACATTAAGGCCCTGAG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACAGCCTGGAAGTTCACTaGAAGTCCATACCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHSLEVH*KSIPEH Trigger: GTGCTCAGGTATGGACTTCCAGTGAACTTCCAGGCT...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTGTAGGAGCACAGCCTaGAAGTTCACTGGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGCRSTA*KFTGSP Trigger: TGGACTTCCAGTGAACTTCCAGGCTGTGCTCCTACA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCCTCTCTCAGGCGTTTaGTGGCTGACTTTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHPLSGV*WLTFYG Trigger: CCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| 3UTR CAA 72 bp | GTGAAGAGGCCACCTTCGTTGTCCTCGGCGATCAATTaGGTTGACCGAGGGACCACCATGTCCGATAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKRPPSLSSAIN*VDRGTTMSDRD Trigger: GTCCCTATCGGACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGACAACGAAGGTGGCCTCTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCGCTCAGTGTCCGAGTaGAGAGGTTCCCCGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEARSVSE*RGSPWI Trigger: GATCCACGGGGAACCTCTTCACTCGGACACTGAGCG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCTCCACCACACTCTGTaGCATTCTCTTTATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHLHHTL*HSLYEA Trigger: AGCCTCATAAAGAGAATGGCACAGAGTGTGGTGGAG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCTCCACCACACTCTGTaGCATTCTCTTTATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGLHHTL*HSLYEA Trigger: AGCCTCATAAAGAGAATGGCACAGAGTGTGGTGGAG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACATCCAGTATGCTTGCTaGAGCAACTTCATCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHIQYAC*SNFIQV Trigger: CACCTGGATGAAGTTGCTGCAGCAAGCATACTGGAT...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCATCCAGTATGCTTGCTaGAGCAACTTCATCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGIQYAC*SNFIQV Trigger: CACCTGGATGAAGTTGCTGCAGCAAGCATACTGGAT...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACTGCATCCAGTATGCTTaGTGCAGCAACTTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHCIQYA*CSNFIQ Trigger: CTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCA...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACTATCAGACAGCAACCTaGTCATCTCCTCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHYQTAT*SSPPFL Trigger: GAGAAAGGGAGGAGATGACCAGGTTGCTGTCTGATA...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTATCAGACAGCAACCTaGTCATCTCCTCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGYQTAT*SSPPFL Trigger: GAGAAAGGGAGGAGATGACCAGGTTGCTGTCTGATA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| 3UTR CAA 72 bp | AGAGGCCACCTTCGTTGTCCTCGGCGATCAATTTGGTaGACCGAGGGACCACCATGTCCGATAGGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGHLRCPRRSIW*TEGPPCPIGTH Trigger: ATGAGTCCCTATCGGACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGACAACGAAGGTGGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CAA 72 bp | GCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTaGAGCACCTCTCTCAGGCGTTTGGTGGCTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAATSSRCRKTE*STSLRRLVADF Trigger: AAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| 3UTR CAA 72 bp | GCAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTaGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVQESPRMHPVC*LQQLHPGAGRQ Trigger: CTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| CDS-3UTR TCA 90 bp | CTCTCAGGCGTTTGGTGGCTGACTTTTTATGGGGCTGTAGGAGCACAGCCTGGACCAAAGTCCCCACCTTaGAGTCTGGGATGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSGVWWLTFYGAVGAQPGPKSPP*SLGWQT Trigger: AGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGG...TCCAGGCTGTGCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| CDS-3UTR GCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACGACTCATATGTCTTCTaGCACTGTGCAAAGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHDSYVF*HCAKLD Trigger: GTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTC...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR GCA 90 bp | TATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGAGCACCTCGTCTGTCTCGATTTGTaGCAGTTGCTGGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YACCSNFIQVPEDRVEHLVCLDL*QLLGGR Trigger: CCTCCCTCCCAGCAACTGGCACAAATCGAGACAGAC...GAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGAGCTGCAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTTGCTGCCCAAGTTCTCCAGGTTaGCCTTCAGAACGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAELQSRNLHGCIQYACCPSSPG*PSERCR Trigger: CCTACAGCGTTCTGAAGGCCAACCTGGAGAACTTGG...GCAGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTGCAGCTCAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| 3UTR CAA 72 bp | TGCCGGAAGACAGAGTTGAGCACCTCTCTCAGGCGTTaGGTGGCTGACTTTTTATGGGGCTGTAGGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CRKTELSTSLRR*VADFLWGCRST Trigger: TGTGCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACGTGCCATTCTCTTTATaGGGCTTTCAGCAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHVPFSL*GFQQRY Trigger: ATACCTTTGCTGAAAGCCTCATAAAGAGAATGGCAC...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR GCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTCCTGGTTGCTGAGCTaGAGTCCAGGAATCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEASWLLS*SPGIST Trigger: CGTGGAGATTCCTGGACTGCAGCTCAGCAACCAGGA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| 3UTR CAA 72 bp | TGGATCCAGGCAATAAAGGCCTCGCTGAAGTTCACCTaGAGCCAGCGCAGCAGAGGTCCATACTGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WIQAIKASLKFT*SQRSRGPYCCF Trigger: GAAACAACAGTATGGACCTCTGCTGCGCTGGCTCAAGGTGAACTTCAGCGAGGCCTTTATTGCCTGGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACGGACAGGTTAGACTTTaGAGTTACATTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHGQVRL*SYIVHP Trigger: AGGATGAACAATGTAACTTCAAAGTCTAACCTGTCC...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCGGACAGGTTAGACTTTaGAGTTACATTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGCLARSEAAVKQAGGQVRL*SYIVHP Trigger: AGGATGAACAATGTAACTTCAAAGTCTAACCTGTCC...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | ATGCATCCAGTATGCTTGCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTCCTTGGAATCTTCCATaGCCTCCACCACACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MHPVCLLQQLHPGAGRQSPWNLP*PPPHSV Trigger: CACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGG...ACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCCTTGGAATCTTCCATaGCCTCCACCACACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAPWNLP*PPPHSV Trigger: CACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGGCGTTTGGTGGCTGACTTTTTATGGGGCTGTAGGAGCACAGCCTGGACTCCACCACACTCTGTaGCATTCTCTTTATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGVWWLTFYGAVGAQPGLHHTL*HSLYEA Trigger: AGCCTCATAAAGAGAATGGCACAGAGTGTGGTGGAG...TCCAGGCTGTGCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCCAAGTTCTCCAGGTTaGCCTTCAGAACGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAPSSPG*PSERCR Trigger: CCTACAGCGTTCTGAAGGCCAACCTGGAGAACTTGG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCTGGAAGTCCATACCTaGGCACAGACTCCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEALEVHT*AQTPQT Trigger: TGTTTGTGGAGTCTGTGCTCAGGTATGGACTTCCAG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCCCCACCTTGAAGTCTaGGATGGCAAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAPHLEV*DGKLGV Trigger: AACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCTTTCCCCTTGGAATCTTCCATGACCTCCACCACACTCTGTGCCATTCTCCCCCACCTTGAAGTCTaGGATGGCAAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAFPLESSMTSTTLCAILPHLEV*DGKLGV Trigger: AACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGG...GAGAATGGCACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGGGGAAAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACAGCAACACAGGAAGTTaGATACTGTTGTTTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGCLARSEAAVKQAGHSNTGS*ILLFLI Trigger: GATAAGAAACAACAGTATCCAACTTCCTGTGTTGCT...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCTCAGGGCCTTAATGTaGATCCAGGCAATAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEALRALM*IQAIKA Trigger: GGCCTTTATTGCCTGGATCCACATTAAGGCCCTGAG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTGTAGGAGCACAGCCTaGAAGTTCACTGGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEACRSTA*KFTGSP Trigger: TGGACTTCCAGTGAACTTCCAGGCTGTGCTCCTACA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCCTCTCTCAGGCGTTTaGTGGCTGACTTTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAPLSGV*WLTFYG Trigger: CCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGCAACTTCATCCAGGTGCCGGAAGACAGAGTTGAGCACCTCTCTCAGGGGACAGGTTAGACTTTaGAGTTACATTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAATSSRCRKTELSTSLRGQVRL*SYIVHP Trigger: AGGATGAACAATGTAACTTCAAAGTCTAACCTGTCC...CCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCACCTGGATGAAGTTGCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGTCTCGATTTGTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCTCACCGGACAGGTTAGACTTTaGAGTTACATTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVSICASCLASVSTTLTGQVRL*SYIVHP Trigger: AGGATGAACAATGTAACTTCAAAGTCTAACCTGTCC...GGTGAGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAATCGAGACAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGGCGTTTGGTGGCTGACTTTTTATGGGGCTGTAGGAGCACAGCCTGGAGTGCCATTCTCTTTATaGGGCTTTCAGCAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGVWWLTFYGAVGAQPGVPFSL*GFQQRY Trigger: ATACCTTTGCTGAAAGCCTCATAAAGAGAATGGCAC...TCCAGGCTGTGCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR GCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTATCCAGTATGCTTGCTaGAGCAACTTCATCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAIQYAC*SNFIQV Trigger: CACCTGGATGAAGTTGCTGCAGCAAGCATACTGGAT...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR GCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTGCATCCAGTATGCTTaGTGCAGCAACTTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEACIQYA*CSNFIQ Trigger: CTGGATGAAGTTGCTGCAGCAAGCATACTGGATGCA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTATCAGACAGCAACCTaGTCATCTCCTCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAYQTAT*SSPPFL Trigger: GAGAAAGGGAGGAGATGACCAGGTTGCTGTCTGATA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR GCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGACTCATATGTCTTCTaGCACTGTGCAAAGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEADSYVF*HCAKLD Trigger: GTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTC...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGTGCCATTCTCTTTATaGGGCTTTCAGCAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAVPFSL*GFQQRY Trigger: ATACCTTTGCTGAAAGCCTCATAAAGAGAATGGCAC...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CCA 90 bp | CACCTAGTCAAGAAGGCTGAGGTCGATATGGAAGTACACATAGGGGAAATAGTCCCCCACCTTGAAGTCTaGGATGGCAAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLVKKAEVDMEVHIGEIVPHLEV*DGKLGV Trigger: AACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGG...GACTATTTCCCCTATGTGTACTTCCATATCGACCTCAGCCTTCTTGACTAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGGACAGGTTAGACTTTaGAGTTACATTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEAGQVRL*SYIVHP Trigger: AGGATGAACAATGTAACTTCAAAGTCTAACCTGTCC...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
||
| 3UTR CAA 72 bp | GACTCATATGTCTTCTGCCACTGTGCAAAGCTTGACTaGGGGACGATGACCAGGAGGGTTATGAGATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSYVFCHCAKLD*GTMTRRVMRYS Trigger: TGAATATCTCATAACCCTCCTGGTCATCGTCCCCAAGTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR CCA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTAGCAACACAGGAAGTTaGATACTGTTGTTTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: YLLSQNPAGLGCLARSEASNTGS*ILLFLI Trigger: GATAAGAAACAACAGTATCCAACTTCCTGTGTTGCT...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCTCACCAGTGGCTGCTaGGCGGGATATTTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGLTSGC*AGYLAM Trigger: CATGGCCAAATATCCCGCCAAGCAGCCACTGGTGAG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACTCCTCGGCGATCAATTaGGTTGACCGAGGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHSSAIN*VDRGTT Trigger: GGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGA...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTCCTCGGCGATCAATTaGGTTGACCGAGGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGSSAIN*VDRGTT Trigger: GGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACTCGCTGAAGTTCACCTaGAGCCAGCGCAGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHSLKFT*SQRSRG Trigger: ACCTCTGCTGCGCTGGCTCAAGGTGAACTTCAGCGA...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTGCCGGAAGACAGAGTaGAGCACCTCTCTCAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGCRKTE*STSLRR Trigger: ACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACTGCCGGAAGACAGAGTaGAGCACCTCTCTCAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHCRKTE*STSLRR Trigger: ACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCA...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCGGCGATCAATTTGGTaGACCGAGGGACCACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGRRSIW*TEGPPC Trigger: ACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCG...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACCGGCGATCAATTTGGTaGACCGAGGGACCACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHRRSIW*TEGPPC Trigger: ACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCG...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTCGTGTGCTTTCCCCTaGGAATCTTCCATGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGSCAFP*ESSMTS Trigger: GGAGGTCATGGAAGATTCCAAGGGGAAAGCACACGA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS TCA 90 bp | GGCCAACCAACCTCAGCGACTCCGTGCGACAGACCCAGGTCCCAGTaGGAAGCTCTTTCAGCAAAGGTATCGAGTTTCCCCAGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GQPTSATPCDRPRSQ*EALSAKVSSFPSSS Trigger: TGATGAGCTGGGGAAACTCGATACCTTTGCTGAAAGAGCTTCTCACTGGGACCTGGGTCTGTCGCACGGAGTCGCTGAGGTTGGTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACACCTCTCTCAGGCGTTaGGTGGCTGACTTTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHTSLRR*VADFLW Trigger: CCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGT...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCACCTCTCTCAGGCGTTaGGTGGCTGACTTTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGTSLRR*VADFLW Trigger: CCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGT...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TGGTTGCTGAGCTGCAGTCCAGGAATCTCCACGGATGCATCCAGTATGCTTGCTCTCACCAGTGGCTGCTaGGCGGGATATTTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WLLSCSPGISTDASSMLALTSGC*AGYLAM Trigger: CATGGCCAAATATCCCGCCAAGCAGCCACTGGTGAG...AGCAAGCATACTGGATGCATCCGTGGAGATTCCTGGACTGCAGCTCAGCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCATGCATCCAGTATGCTaGCTGCAGCAACTTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGMHPVC*LQQLHP Trigger: TGGATGAAGTTGCTGCAGCAAGCATACTGGATGCAT...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCATGGCAAACTTGGTGTaGTGGGACAGGTTAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGMANLV*WDRLDF Trigger: AAAGTCTAACCTGTCCCACAACACCAAGTTTGCCAT...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCTCACCAGTGGCTGCTaGGCGGGATATTTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEALTSGC*AGYLAM Trigger: CATGGCCAAATATCCCGCCAAGCAGCCACTGGTGAG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTCCTCGGCGATCAATTaGGTTGACCGAGGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEASSAIN*VDRGTT Trigger: GGTGGTCCCTCGGTCAACCAAATTGATCGCCGAGGA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTCGCTGAAGTTCACCTaGAGCCAGCGCAGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEASLKFT*SQRSRG Trigger: ACCTCTGCTGCGCTGGCTCAAGGTGAACTTCAGCGA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTGCCGGAAGACAGAGTaGAGCACCTCTCTCAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEACRKTE*STSLRR Trigger: ACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCGGCA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCGGCGATCAATTTGGTaGACCGAGGGACCACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEARRSIW*TEGPPC Trigger: ACATGGTGGTCCCTCGGTCAACCAAATTGATCGCCG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCTCCCGGACAATGAACTaGTTTTCTTTGGCTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGSRTMN*FSLALT Trigger: AGTCAAAGCCAAAGAAAACAAGTTCATTGTCCGGGA...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | GACTCCACAAACACTCTCAGGGCCTTAATGTGGATCCAGGCAATAAAGGCCTCGTCGTGTGCTTTCCCCTaGGAATCTTCCATGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSTNTLRALMWIQAIKASSCAFP*ESSMTS Trigger: GGAGGTCATGGAAGATTCCAAGGGGAAAGCACACGA...CGAGGCCTTTATTGCCTGGATCCACATTAAGGCCCTGAGAGTGTTTGTGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
||
| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTCGTGTGCTTTCCCCTaGGAATCTTCCATGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEASCAFP*ESSMTS Trigger: GGAGGTCATGGAAGATTCCAAGGGGAAAGCACACGA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACGGAAGTTGGATACTGTaGTTTCTTATCAGACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHGSWIL*FLIRQQ Trigger: TTGCTGTCTGATAAGAAACAACAGTATCCAACTTCC...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCGGAAGTTGGATACTGTaGTTTCTTATCAGACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGGSWIL*FLIRQQ Trigger: TTGCTGTCTGATAAGAAACAACAGTATCCAACTTCC...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCGAGCAACACAGGAAGTaGGATACTGTTGTTTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: PAGLGCLARSEAAVKQAGEQHRK*DTVVSY Trigger: ATAAGAAACAACAGTATCCAACTTCCTGTGTTGCTC...GCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 |
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| CDS-3UTR CAA 90 bp | GCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTGCAGTGAAACAGGCTGGCCACGAGCAACACAGGAAGTaGGATACTGTTGTTTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: AGLGCLARSEAAVKQAGHEQHRK*DTVVSY Trigger: ATAAGAAACAACAGTATCCAACTTCCTGTGTTGCTC...GTGGCCAGCCTGTTTCACTGCAGCCTCAGACCTTGCCAGACAACCGAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 |
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| CDS-3UTR CAA 90 bp | CTTCAGGTCTGTCTCGATTTGTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCTATGGCAAACTTGGTGTaGTGGGACAGGTTAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: LQVCLDLCQLLGQCVHHAMANLV*WDRLDF Trigger: AAAGTCTAACCTGTCCCACAACACCAAGTTTGCCAT...AGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAATCGAGACAGACCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTCTGGGATGGCAAACTaGGTGTTGTGGGACAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEASGMAN*VLWDRL Trigger: TAACCTGTCCCACAACACCAAGTTTGCCATCCCAGA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTACCTCTCTCAGGCGTTaGGTGGCTGACTTTTTATGG | + |
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Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEATSLRR*VADFLW Trigger: CCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGT...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTATGCATCCAGTATGCTaGCTGCAGCAACTTCATCCA | + |
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Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEAMHPVC*LQQLHP Trigger: TGGATGAAGTTGCTGCAGCAAGCATACTGGATGCAT...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTATGGCAAACTTGGTGTaGTGGGACAGGTTAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEAMANLV*WDRLDF Trigger: AAAGTCTAACCTGTCCCACAACACCAAGTTTGCCAT...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | CGGAAGACAGAGTTGAGCACCTCTCTCAGGCGTTTGGTGGCTGACTTTTTATGGATGGCAAACTTGGTGTaGTGGGACAGGTTAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: RKTELSTSLRRLVADFLWMANLV*WDRLDF Trigger: AAAGTCTAACCTGTCCCACAACACCAAGTTTGCCAT...CCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGTGCTCAACTCTGTCTTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140751.8 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTTCCCGGACAATGAACTaGTTTTCTTTGGCTTTGACT | + |
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Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEASRTMN*FSLALT Trigger: AGTCAAAGCCAAAGAAAACAAGTTCATTGTCCGGGA...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS-3UTR CAA 90 bp | TATCTTCTGAGTCAGAATCCTGCAGGACTCGGTTGTCTGGCAAGGTCTGAGGCTCAGAGGTCCATACTGTaGTTTCTTATCAGACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: YLLSQNPAGLGCLARSEAQRSIL*FLIRQQ Trigger: TTGCTGTCTGATAAGAAACAACAGTATGGACCTCTG...AGCCTCAGACCTTGCCAGACAACCGAGTCCTGCAGGATTCTGACTCAGAAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221129.2 |
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| CDS CCA 90 bp | TCCAAAGTCCCCACCTTGAAGTCTGGGATGGCAAACTTGGTGTTGTaGGACAGGTTAGACTTTGAAGTTACATTGTTCATCCTTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SKVPTLKSGMANLVL*DRLDFEVTLFILSR Trigger: TCTGGAAAGGATGAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS GCA 72 bp | GGCGGCTGTCCGGGACTTCAGGTCTGTCTCGATTTGTaGCAGTTGCTTGGCCAGTGTGTCCACCACGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GGCPGLQVCLDL*QLLGQCVHHAH Trigger: GTGAGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAATCGAGACAGACCTGAAGTCCCGGACAGCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS CAA 90 bp | CAGAACGCTGTAGGCGGCTGTCCGGGACTTCAGGTCTGTCTCGATTaGTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCTCACCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QNAVGGCPGLQVCLD*CQLLGQCVHHAHQW Trigger: CCACTGGTGAGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAATCGAGACAGACCTGAAGTCCCGGACAGCCGCCTACAGCGTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS CCA 72 bp | GGTTCCCCGTGGATCTCTTCTCCAAGTTCTCCAGGTTaGCCTTCAGAACGCTGTAGGCGGCTGTCCGGGACT | + |
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Preference number: 6 (lower is better) Translates to: GSPWISSPSSPG*PSERCRRLSGT Trigger: AGTCCCGGACAGCCGCCTACAGCGTTCTGAAGGCCAACCTGGAGAACTTGGAGAAGAGATCCACGGGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS CAA 72 bp | GTAGGCGGCTGTCCGGGACTTCAGGTCTGTCTCGATTaGTGCCAGTTGCTTGGCCAGTGTGTCCACCACGCT | + |
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Preference number: 6 (lower is better) Translates to: VGGCPGLQVCLD*CQLLGQCVHHA Trigger: AGCGTGGTGGACACACTGGCCAAGCAACTGGCACAAATCGAGACAGACCTGAAGTCCCGGACAGCCGCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS TCA 72 bp | ACCTCAGCGACTCCGTGCGACAGACCCAGGTCCCAGTaGGAAGCTCTTTCAGCAAAGGTATCGAGTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TSATPCDRPRSQ*EALSAKVSSFP Trigger: GGGGAAACTCGATACCTTTGCTGAAAGAGCTTCTCACTGGGACCTGGGTCTGTCGCACGGAGTCGCTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222103.2 |
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| CDS CAA 90 bp | CCCAGCTCATCAGAGAGGCCAACAAGGGAATCCAAAGTCCCCACCTaGAAGTCTGGGATGGCAAACTTGGTGTTGTGGGACAGGTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: PSSSERPTRESKVPT*KSGMANLVLWDRLD Trigger: GTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGATTCCCTTGTTGGCCTCTCTGATGAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS TCA 72 bp | CAGAGAGGCCAACAAGGGAATCCAAAGTCCCCACCTTaGAGTCTGGGATGGCAAACTTGGTGTTGTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: QRGQQGNPKSPP*SLGWQTWCCGT Trigger: TGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGATTCCCTTGTTGGCCTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CAA 72 bp | TCAGAGAGGCCAACAAGGGAATCCAAAGTCCCCACCTaGAAGTCTGGGATGGCAAACTTGGTGTTGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SERPTRESKVPT*KSGMANLVLWD Trigger: GTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGATTCCCTTGTTGGCCTCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CCA 72 bp | GCCAACAAGGGAATCCAAAGTCCCCACCTTGAAGTCTaGGATGGCAAACTTGGTGTTGTGGGACAGGTTAGA | + |
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Preference number: 6 (lower is better) Translates to: ANKGIQSPHLEV*DGKLGVVGQVR Trigger: TCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGATTCCCTTGTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS GCA 72 bp | CCCCTTGGAATCTTCCATGACCTCCACCACACTCTGTaGCATTCTCTTTATGAGGCTTTCAGCAAAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: PLGIFHDLHHTL*HSLYEAFSKGI Trigger: GATACCTTTGCTGAAAGCCTCATAAAGAGAATGGCACAGAGTGTGGTGGAGGTCATGGAAGATTCCAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000153090.8 ENSMUST00000221129.2 |
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| CDS CAA 90 bp | ACCAGGAGGGTTATGAGATATTCAGAATCAAGTACGAAGTCTTCCTaGCTGACAATATCGCTCAGTGTCCGAGTGAAGAGGTTCCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: TRRVMRYSESSTKSS*LTISLSVRVKRFPV Trigger: CACGGGGAACCTCTTCACTCGGACACTGAGCGATATTGTCAGCAAGGAAGACTTCGTACTTGATTCTGAATATCTCATAACCCTCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS CAA 90 bp | TCCGATAGGGACTCATATGTCTTCTGCCACTGTGCAAAGCTTGACTaGGGGACGATGACCAGGAGGGTTATGAGATATTCAGAATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SDRDSYVFCHCAKLD*GTMTRRVMRYSESS Trigger: ACTTGATTCTGAATATCTCATAACCCTCCTGGTCATCGTCCCCAAGTCAAGCTTTGCACAGTGGCAGAAGACATATGAGTCCCTATCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS CAA 72 bp | GTCCCCACCTTGAAGTCTGGGATGGCAAACTTGGTGTaGTGGGACAGGTTAGACTTTGAAGTTACATTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VPTLKSGMANLV*WDRLDFEVTLF Trigger: GAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CAA 72 bp | TCCAAAGTCCCCACCTTGAAGTCTGGGATGGCAAACTaGGTGTTGTGGGACAGGTTAGACTTTGAAGTTACA | + |
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Preference number: 6 (lower is better) Translates to: SKVPTLKSGMAN*VLWDRLDFEVT Trigger: TGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000127185.8 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CAA 90 bp | GAATCCAAAGTCCCCACCTTGAAGTCTGGGATGGCAAACTTGGTGTaGTGGGACAGGTTAGACTTTGAAGTTACATTGTTCATCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ESKVPTLKSGMANLV*WDRLDFEVTLFILS Trigger: GGAAAGGATGAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CAA 90 bp | ACAAGGGAATCCAAAGTCCCCACCTTGAAGTCTGGGATGGCAAACTaGGTGTTGTGGGACAGGTTAGACTTTGAAGTTACATTGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: TRESKVPTLKSGMAN*VLWDRLDFEVTLFI Trigger: GATGAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGGGACTTTGGATTCCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CCA 72 bp | CCCACCTTGAAGTCTGGGATGGCAAACTTGGTGTTGTaGGACAGGTTAGACTTTGAAGTTACATTGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PTLKSGMANLVL*DRLDFEVTLFI Trigger: GATGAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCATCCCAGACTTCAAGGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CAA 90 bp | ATGGCAAACTTGGTGTTGTGGGACAGGTTAGACTTTGAAGTTACATaGTTCATCCTTTCCAGAGCCTGTAAATTTTCCTTATCGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: MANLVLWDRLDFEVT*FILSRACKFSLSPG Trigger: CCCTGGCGATAAGGAAAATTTACAGGCTCTGGAAAGGATGAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAAGTTTGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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| CDS CAA 72 bp | GTTATGAGATATTCAGAATCAAGTACGAAGTCTTCCTaGCTGACAATATCGCTCAGTGTCCGAGTGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VMRYSESSTKSS*LTISLSVRVKR Trigger: CCTCTTCACTCGGACACTGAGCGATATTGTCAGCAAGGAAGACTTCGTACTTGATTCTGAATATCTCATAAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000156727.8 ENSMUST00000221129.2 |
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| CDS CAA 72 bp | TTGGTGTTGTGGGACAGGTTAGACTTTGAAGTTACATaGTTCATCCTTTCCAGAGCCTGTAAATTTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LVLWDRLDFEVT*FILSRACKFSL Trigger: TAAGGAAAATTTACAGGCTCTGGAAAGGATGAACAATGTAACTTCAAAGTCTAACCTGTCCCACAACACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000020884.16 ENSMUST00000095820.12 ENSMUST00000140751.8 ENSMUST00000143131.2 ENSMUST00000153090.8 ENSMUST00000221129.2 ENSMUST00000222103.2 |
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