Pregenerated sensors for ATP6V0E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015575Ensembl transcript IDs: ENSMUST00000015719.16, ENSMUST00000167352.2, ENSMUST00000236346.2, ENSMUST00000236867.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTGCACAGGTGTATCAGAGGACGAGTGCTGAGGATCTCAGCAGGTaGATGGGGATCCCAGGGATGCAAGAGCTTTCACCCTCTGCACCA | + |
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Preference number: 1 (lower is better) Translates to: RAQVYQRTSAEDLSR*MGIPGMQELSPSAP Trigger: TGGTGCAGAGGGTGAAAGCTCTTGCATCCCTGGGATCCCCATCCACCTGCTGAGATCCTCAGCACTCGTCCTCTGATACACCTGTGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 90 bp | GGACGAGTGCTGAGGATCTCAGCAGGTGGATGGGGATCCCAGGGATaGAAGAGCTTTCACCCTCTGCACCATCTCTCCTGCACCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: GRVLRISAGGWGSQG*KSFHPLHHLSCTKL Trigger: AAGTTTGGTGCAGGAGAGATGGTGCAGAGGGTGAAAGCTCTTGCATCCCTGGGATCCCCATCCACCTGCTGAGATCCTCAGCACTCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 90 bp | CCTAGGGCGGGCTGGGCAGGCTTGAGGGAAGCCATGGTGCAGAGCTaGTTAGAACCTAAGACCAAATGTTCTTATTCTCCACGTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PRAGWAGLREAMVQS*LEPKTKCSYSPRSW Trigger: CCAGGAACGTGGAGAATAAGAACATTTGGTCTTAGGTTCTAAGCAGCTCTGCACCATGGCTTCCCTCAAGCCTGCCCAGCCCGCCCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 90 bp | TGGTGTACATCTGCTGGGGTAGGGCTCCTCTTGAGCAGGCACTCCTaGCTGTCCCGCCGAGTCTTGTTTGTCTCGCAGCAATTCTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: WCTSAGVGLLLSRHS*LSRRVLFVSQQFLN Trigger: GTTTAAGAATTGCTGCGAGACAAACAAGACTCGGCGGGACAGTCAGGAGTGCCTGCTCAAGAGGAGCCCTACCCCAGCAGATGTACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR TCA 90 bp | CAGGGCTCTGTGTTGGGTGAGCTAAGGAGCATGGAGTCCTCTCCATaGTGTGGAAATAACGAGCTGAGGATGGAGCTGGAACAACCAATC | + |
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Preference number: 1 (lower is better) Translates to: QGSVLGELRSMESSP*CGNNELRMELEQPI Trigger: GATTGGTTGTTCCAGCTCCATCCTCAGCTCGTTATTTCCACATCATGGAGAGGACTCCATGCTCCTTAGCTCACCCAACACAGAGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 90 bp | TTGGAGTCACTCTGTAGCTTGAGCTGGTCTAGCCCAGGCTGGCTTTaGACTTATCATCCCCCTGTCTCTGAAATCAATGCTGGAATTACG | + |
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Preference number: 1 (lower is better) Translates to: LESLCSLSWSSPGWL*TYHPPVSEINAGIT Trigger: CGTAATTCCAGCATTGATTTCAGAGACAGGGGGATGATAAGTTCAAAGCCAGCCTGGGCTAGACCAGCTCAAGCTACAGAGTGACTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 90 bp | TTTGTCTCGCAGCAATTCTTAAACACATCGCTGACTCTCATGTTGTaGGCTGGCAAGAGCCATATTCAAAGCCACAGGCTTCAAGATAAG | + |
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Preference number: 1 (lower is better) Translates to: FVSQQFLNTSLTLML*AGKSHIQSHRLQDK Trigger: CTTATCTTGAAGCCTGTGGCTTTGAATATGGCTCTTGCCAGCTCACAACATGAGAGTCAGCGATGTGTTTAAGAATTGCTGCGAGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAAGATCTTCAAGTGTAAGGCAGGTAACGCCCGAAGTGGGCTATGGAGGATGTCTGCGACCTCAGTaGCTAGGCACTGTGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: RGRSSSVRQVTPEVGYGGCLRPQ*LGTVQR Trigger: GCGCTGCACAGTGCCTAGGCACTGAGGTCGCAGACA...TCCTCCATAGCCCACTTCGGGCGTTACCTGCCTTACACTTGAAGATCTTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGCACTCCTGACTGTCCCGCCGAGTCTTGTTTGTCTCGCAGCAATTCTTGGTCTGATGTGCAGGTaGTTCTGCACAGAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: EQALLTVPPSLVCLAAILGLMCR*FCTEGF Trigger: GAAGCCTTCTGTGCAGAATCACCTGCACATCAGACC...AAGAATTGCTGCGAGACAAACAAGACTCGGCGGGACAGTCAGGAGTGCCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGAAAGAGGGAGCTTACGGTCTTaGACCACGTGCACAGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: HGNSRPGTSRSGAEREERGSLRS*TTCTGV Trigger: TACACCTGTGCACGTGGTTCAAGACCGTAAGCTCCC...TCTTTCTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR GCA 90 bp | AGTAACACATTTCCCGAAACAGTGGAGTGCAGACACATCTCAGAGGCAGCTACGTGTCTGCGACCTCAGTaGCTAGGCACTGTGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: SNTFPETVECRHISEAATCLRPQ*LGTVQR Trigger: GCGCTGCACAGTGCCTAGGCACTGAGGTCGCAGACA...CGTAGCTGCCTCTGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGAAAGAAATCTGCTGGGAGCCTaGAGGGGAGCTTACGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HGNSRPGTSRSGAEREERNLLGA*RGAYGL Trigger: AAGACCGTAAGCTCCCCTGCAGGCTCCCAGCAGATT...TCTTTCTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCAGCTGGGCAGTGGTGGTGCACACCTTTAATTCCAGCACTCAAGTGGATAGAGCTTTCACCCTCTaGACCATCTCTCCTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: KASWAVVVHTFNSSTQVDRAFTL*TISPAP Trigger: TGGTGCAGGAGAGATGGTGCAGAGGGTGAAAGCTCT...ATCCACTTGAGTGCTGGAATTAAAGGTGTGCACCACCACTGCCCAGCTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGCCAGCAAGCACATGGTaGCTCACAACCATCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RNMETAGLEPPGQEQREKPASTW*LTTIFW Trigger: CCAGAAGATGGTTGTGAGCCACCATGTGCTTGCTGG...CTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGCAGTGGTGGTGCACACCTTTAATTCCAGCACTCAAGTGGATCTCCAGTAACAGAGGGGGCTaGAGAGATGAGATGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PAGQWWCTPLIPALKWISSNRGG*RDEMVQ Trigger: CTGAACCATCTCATCTCTCCAGCCCCCTCTGTTACT...GGAGATCCACTTGAGTGCTGGAATTAAAGGTGTGCACCACCACTGCCCAGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGCAGAGGAAGATCTTCAAGTGTAAGGCAGGTAACGCCCGAAGTGGGCTATGGTCTGATGTGCAGGTaGTTCTGCACAGAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VCRGRSSSVRQVTPEVGYGLMCR*FCTEGF Trigger: GAAGCCTTCTGTGCAGAATCACCTGCACATCAGACC...ATAGCCCACTTCGGGCGTTACCTGCCTTACACTTGAAGATCTTCCTCTGCATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGCAGTGGTGGTGCACACCTTTAATTCCAGCACTCAAGTGGATCTCCGATGAGATGGTTCAGTaGTTAAGAGCACTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: PAGQWWCTPLIPALKWISDEMVQ*LRALTA Trigger: AGCAGTCAGTGCTCTTAACCACTGAACCATCTCATC...GGAGATCCACTTGAGTGCTGGAATTAAAGGTGTGCACCACCACTGCCCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAACACATTTCCCGAAACAGTGGAGTGCAGACACATCTCAGAGGCAGCTACGCTATGGAGGAAGGTCTaGTGTGCAGGTGATTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SNTFPETVECRHISEAATLWRKV*CAGDSA Trigger: TGCAGAATCACCTGCACATCAGACCTTCCTCCATAG...CGTAGCTGCCTCTGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGAAAGAAGCAAACATACTAGCTaGCTGGCTGTCAATGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HGNSRPGTSRSGAEREERSKHTS*LAVNVH Trigger: GTGAACATTGACAGCCAGTCAGCTAGTATGTTTGCT...TCTTTCTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAGAACACTGGCTGCTTTCTTGAGTCTGGCTCCCAGCACCCATATGGTAAGGGGGCTGGAGAGATaGGATGGTTCAGTGGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: SLRTLAAFLSLAPSTHMVRGLER*DGSVVK Trigger: CTTAACCACTGAACCATCTCATCTCTCCAGCCCCCT...TACCATATGGGTGCTGGGAGCCAGACTCAAGAAAGCAGCCAGTGTTCTTAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGAAAGATTTAAGAACACTGGCTaGTTTCTTGAGTCTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: HGNSRPGTSRSGAEREERFKNTG*FLESGS Trigger: GGAGCCAGACTCAAGAAAGCAGCCAGTGTTCTTAAA...TCTTTCTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGACAGCCAAGGCTACACAAAGAAACCGGGTCTTGCAAACAAACAAAAAATCTCAGCAGGTGGATaGGGATCCCAGGGATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: FQDSQGYTKKPGLANKQKISAGG*GSQGCK Trigger: CTTGCATCCCTGGGATCCCCATCCACCTGCTGAGAT...TTTTTGTTTGTTTGCAAGACCCGGTTTCTTTGTGTAGCCTTGGCTGTCCTGGAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGAGATATGGCTTAGTTTCTTTAAGAACACTGGCTGCTTTCTTGAGTCTGAGGATCTCAGCAGGTaGATGGGGATCCCAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: RLEIWLSFFKNTGCFLESEDLSR*MGIPGM Trigger: CATCCCTGGGATCCCCATCCACCTGCTGAGATCCTC...AGACTCAAGAAAGCAGCCAGTGTTCTTAAAGAAACTAAGCCATATCTCCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAGAACACTGGCTGCTTTCTTGAGTCTGGCTCCCAGCACCCATATGGTAAGAAAAGGAATCAGATaGCAAGGGACCTGCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: SLRTLAAFLSLAPSTHMVRKGIR*QGTCHS Trigger: TGAGTGGCAGGTCCCTTGTCATCTGATTCCTTTTCT...TACCATATGGGTGCTGGGAGCCAGACTCAAGAAAGCAGCCAGTGTTCTTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGAAAGAAGCATGTTAAGAAAATaGCTCAGCTCTGTTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: HGNSRPGTSRSGAEREERSMLRK*LSSVLN Trigger: GTTCAGAACAGAGCTGAGCCATTTTCTTAACATGCT...TCTTTCTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGTATTCTCCACGTTCCTaGTTTTGTAACTCAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RNMETAGLEPPGQEQREKYSPRS*FCNSRD Trigger: ATCCCTTGAGTTACAAAACCAGGAACGTGGAGAATA...CTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGCAGTGGTGGTGCACACCTTTAATTCCAGCACTCAAGTGGATCTCCCGGGCATTAAAAGAGTaGTTAACAATTAGAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PAGQWWCTPLIPALKWISRALKE*LTIRKP Trigger: TGGCTTTCTAATTGTTAACCACTCTTTTAATGCCCG...GGAGATCCACTTGAGTGCTGGAATTAAAGGTGTGCACCACCACTGCCCAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAATGACAATCTTTCTCAAGAAGTGCTCAGAGGCTGGAGATATGGCTTAGTTAGCCCAGGCTGGCTTTaGACTTATCATCCCCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: TNDNLSQEVLRGWRYGLVSPGWL*TYHPPV Trigger: GACAGGGGGATGATAAGTTCAAAGCCAGCCTGGGCT...AACTAAGCCATATCTCCAGCCTCTGAGCACTTCTTGAGAAAGATTGTCATTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGACAATCTTTCTCAAGAAGTGCTCAGAGGCTGGAGATATGGCTTAGTTTGGGGATCCCAGGGATaGAAGAGCTTTCACCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TNDNLSQEVLRGWRYGLVWGSQG*KSFHPL Trigger: CAGAGGGTGAAAGCTCTTGCATCCCTGGGATCCCCA...AACTAAGCCATATCTCCAGCCTCTGAGCACTTCTTGAGAAAGATTGTCATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGGACAGCCAAGGCTACACAAAGAAACCGGGTCTTGCAAACAAACAAAAAAGCAAGCACAGGATTTaGAGGCTGAGCCCTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: FQDSQGYTKKPGLANKQKSKHRI*RLSPET Trigger: TGTTTCAGGGCTCAGCCTGCAAATCCTGTGCTTGCT...TTTTTGTTTGTTTGCAAGACCCGGTTTCTTTGTGTAGCCTTGGCTGTCCTGGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAAGAACACTGGCTGCTTTCTTGAGTCTGGCTCCCAGCACCCATATGGTAATGCGAAGACACACATaGAGGCAAACATTCATACAT | + |
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Preference number: 2 (lower is better) Translates to: SLRTLAAFLSLAPSTHMVMRRHT*RQTFIH Trigger: ATGTATGAATGTTTGCCTGCATGTGTGTCTTCGCAT...TACCATATGGGTGCTGGGAGCCAGACTCAAGAAAGCAGCCAGTGTTCTTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGACAGCCAAGGCTACACAAAGAAACCGGGTCTTGCAAACAAACAAAAAAACAAAAGGCCAGAATaGAGAACCCCATTCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: FQDSQGYTKKPGLANKQKNKRPE*RTPFIQ Trigger: TTGGATGAATGGGGTTCTTCATTCTGGCCTTTTGTT...TTTTTGTTTGTTTGCAAGACCCGGTTTCTTTGTGTAGCCTTGGCTGTCCTGGAA 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAATAAACCACTGTTTACCACCTaGTCTCAGCATCAAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: PSSGVSEDSYSVLTYNNKPLFTT*SQHQMK Trigger: TTTCATTTGATGCTGAGACCAGGTGGTAAACAGTGG...TTTATTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 72 bp | CTGAGGATCTCAGCAGGTGGATGGGGATCCCAGGGATaGAAGAGCTTTCACCCTCTGCACCATCTCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LRISAGGWGSQG*KSFHPLHHLSC Trigger: GCAGGAGAGATGGTGCAGAGGGTGAAAGCTCTTGCATCCCTGGGATCCCCATCCACCTGCTGAGATCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR CCA 72 bp | GTGTATCAGAGGACGAGTGCTGAGGATCTCAGCAGGTaGATGGGGATCCCAGGGATGCAAGAGCTTTCACCC | + |
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Preference number: 3 (lower is better) Translates to: VYQRTSAEDLSR*MGIPGMQELSP Trigger: GGGTGAAAGCTCTTGCATCCCTGGGATCCCCATCCACCTGCTGAGATCCTCAGCACTCGTCCTCTGATACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAACATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGGGGGAGCTTACGGTCTaGAACCACGTGCACAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: RNMETAGLEPPGQEQREKGELTV*NHVHRC Trigger: ACACCTGTGCACGTGGTTCAAGACCGTAAGCTCCCC...CTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATGTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 72 bp | CCGAAGTGGGCTATGGAGGAAGGTCTGATGTGCAGGTaGTTCTGCACAGAAGGCTTCTGTCTGCGACCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PKWAMEEGLMCR*FCTEGFCLRPQ Trigger: CTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCACCTGCACATCAGACCTTCCTCCATAGCCCACTTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| 3UTR TCA 72 bp | GCAGGTAACGCCCGAAGTGGGCTATGGAGGAAGGTCTaGTGTGCAGGTGATTCTGCACAGAAGGCTTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: AGNARSGLWRKV*CAGDSAQKASV Trigger: GACAGAAGCCTTCTGTGCAGAATCACCTGCACATCAGACCTTCCTCCATAGCCCACTTCGGGCGTTACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| 3UTR TCA 72 bp | CTAGAGTTAAGTGTGGCTCCAGGGCTCTGTGTTGGGTaGGCTAAGGAGCATGGAGTCCTCTCCATGATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LELSVAPGLCVG*AKEHGVLSMMW Trigger: CCACATCATGGAGAGGACTCCATGCTCCTTAGCTCACCCAACACAGAGCCCTGGAGCCACACTTAACTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCAGCTGGGCAGTGGTGGTGCACACCTTTAATTCCAGCACTCAAGTGGATTCCAGAGACACACACTaGCTGACCTGCCTTCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: KASWAVVVHTFNSSTQVDSRDTH*LTCLLS Trigger: GCTTAGAAGGCAGGTCAGCAAGTGTGTGTCTCTGGA...ATCCACTTGAGTGCTGGAATTAAAGGTGTGCACCACCACTGCCCAGCTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 72 bp | GTGTTGGGTGAGCTAAGGAGCATGGAGTCCTCTCCATaGTGTGGAAATAACGAGCTGAGGATGGAGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: VLGELRSMESSP*CGNNELRMELE Trigger: TTCCAGCTCCATCCTCAGCTCGTTATTTCCACATCATGGAGAGGACTCCATGCTCCTTAGCTCACCCAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 72 bp | GATGGGGATCCCAGGGATGCAAGAGCTTTCACCCTCTaGACCATCTCTCCTGCACCAAACTTTAAAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: DGDPRDARAFTL*TISPAPNFKRV Trigger: TACCCTTTTAAAGTTTGGTGCAGGAGAGATGGTGCAGAGGGTGAAAGCTCTTGCATCCCTGGGATCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 72 bp | GGCTGGGCAGGCTTGAGGGAAGCCATGGTGCAGAGCTaGTTAGAACCTAAGACCAAATGTTCTTATTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GWAGLREAMVQS*LEPKTKCSYSP Trigger: TGGAGAATAAGAACATTTGGTCTTAGGTTCTAAGCAGCTCTGCACCATGGCTTCCCTCAAGCCTGCCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR CCA 72 bp | AGTAACAGAGGGGGCTGGAGAGATGAGATGGTTCAGTaGTTAAGAGCACTGACTGCTCTTCTGAAGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SNRGGWRDEMVQ*LRALTALLKVL Trigger: CAGGACCTTCAGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCATCTCTCCAGCCCCCTCTGTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTGGGCAGTGGTGGTGCACACCTTTAATTCCAGCACTCAAGTGGATCTCCAGCCATTTCTTCCCATaGTTAGGTGCTGTTAGACTA | + |
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Preference number: 3 (lower is better) Translates to: PAGQWWCTPLIPALKWISSHFFP*LGAVRL Trigger: TAGTCTAACAGCACCTAACAATGGGAAGAAATGGCT...GGAGATCCACTTGAGTGCTGGAATTAAAGGTGTGCACCACCACTGCCCAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 72 bp | CTCTGTAGCTTGAGCTGGTCTAGCCCAGGCTGGCTTTaGACTTATCATCCCCCTGTCTCTGAAATCAATGCT | + |
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Preference number: 3 (lower is better) Translates to: LCSLSWSSPGWL*TYHPPVSEINA Trigger: AGCATTGATTTCAGAGACAGGGGGATGATAAGTTCAAAGCCAGCCTGGGCTAGACCAGCTCAAGCTACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 72 bp | GCATGGAGTCCTCTCCATGATGTGGAAATAACGAGCTaGGGATGGAGCTGGAACAACCAATCCAGAACCTGT | + |
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Preference number: 3 (lower is better) Translates to: AWSPLHDVEITS*GWSWNNQSRTC Trigger: ACAGGTTCTGGATTGGTTGTTCCAGCTCCATCCTCAGCTCGTTATTTCCACATCATGGAGAGGACTCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR CCA 72 bp | GGCTTCAAGATAAGAGTAACACATTTCCCGAAACAGTaGAGTGCAGACACATCTCAGAGGCAGCTACGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GFKIRVTHFPKQ*SADTSQRQLRR Trigger: CCTGCGTAGCTGCCTCTGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACTCTTATCTTGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCAGGACAGCCAAGGCTACACAAAGAAACCGGGTCTTGCAAACAAACAAAAAACCTTCAGCAGCGGATaGTCTCCCTTTCCCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: FQDSQGYTKKPGLANKQKTFSSG*SPFPQS Trigger: GCTTTGGGGAAAGGGAGACAATCCGCTGCTGAAGGT...TTTTTGTTTGTTTGCAAGACCCGGTTTCTTTGTGTAGCCTTGGCTGTCCTGGAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 72 bp | CAAGATAAGAGTAACACATTTCCCGAAACAGTGGAGTaGAGACACATCTCAGAGGCAGCTACGCAGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: QDKSNTFPETVE*RHISEAATQAH Trigger: ATGTGCCTGCGTAGCTGCCTCTGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACTCTTATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| 3UTR CCA 72 bp | TGGGTAAACTTTTGCGCGCTGCCACTGTTTACCACCTaGTCTCAGCATCAAATGAAAGCTTCCGTCTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: WVNFCALPLFTT*SQHQMKASVLS Trigger: ACTCAAGACGGAAGCTTTCATTTGATGCTGAGACCAGGTGGTAAACAGTGGCAGCGCGCAAAAGTTTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR TCA 72 bp | CCCAGGCTGGCTTTGAACTTATCATCCCCCTGTCTCTaGAATCAATGCTGGAATTACGGGCATATACAATTC | + |
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Preference number: 3 (lower is better) Translates to: PRLALNLSSPCL*NQCWNYGHIQF Trigger: GAATTGTATATGCCCGTAATTCCAGCATTGATTTCAGAGACAGGGGGATGATAAGTTCAAAGCCAGCCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR CCA 72 bp | CAATCTTTCTCAAGAAGTGCTCAGAGGCTGGAGATATaGCTTAGTTTCTTTAAGAACACTGGCTGCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QSFSRSAQRLEI*LSFFKNTGCFL Trigger: AAGAAAGCAGCCAGTGTTCTTAAAGAAACTAAGCCATATCTCCAGCCTCTGAGCACTTCTTGAGAAAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR CCA 72 bp | ACAAATGACAATCTTTCTCAAGAAGTGCTCAGAGGCTaGAGATATGGCTTAGTTTCTTTAAGAACACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TNDNLSQEVLRG*RYGLVSLRTLA Trigger: AGCCAGTGTTCTTAAAGAAACTAAGCCATATCTCCAGCCTCTGAGCACTTCTTGAGAAAGATTGTCATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR GCA 72 bp | CCAGGACAGCCAAGGCTACACAAAGAAACCGGGTCTTaGAAACAAACAAAAATAAACAAAAACAGAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: PGQPRLHKETGS*KQTKINKNRTK Trigger: TTTTGTTCTGTTTTTGTTTATTTTTGTTTGTTTGCAAGACCCGGTTTCTTTGTGTAGCCTTGGCTGTCCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| CDS-3UTR TCA 90 bp | GATGTGCAGGTGATTCTGCACAGAAGGCTTCTGTCTGCGACCTCAGTGCCTAGGTCCATGGGGCTTGACTaGGATGAACCTCCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DVQVILHRRLLSATSVPRSMGLD*DEPPAT Trigger: GGTGGCTGGAGGTTCATCTCAGTCAAGCCCCATGGA...CCTAGGCACTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCACCTGCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236867.2 |
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| CDS-3UTR CCA 90 bp | GTGCAGGTGATTCTGCACAGAAGGCTTCTGTCTGCGACCTCAGTGCCTAGGCACTCTGCCGCAGTTTCTTaGACAGCCGGGAAGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: VQVILHRRLLSATSVPRHSAAVS*TAGKTR Trigger: CCTTGTCTTCCCGGCTGTCCAAGAAACTGCGGCAGA...GTGCCTAGGCACTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCACCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236346.2 |
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| CDS-3UTR TCA 90 bp | GATGTGCAGGTGATTCTGCACAGAAGGCTTCTGTCTGCGACCTCAGTGCCTAGGGTCCAAACAGAGGATTaGGCTGTGCCAGAATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: DVQVILHRRLLSATSVPRVQTED*AVPELQ Trigger: TTGCAATTCTGGCACAGCTCAATCCTCTGTTTGGAC...CCTAGGCACTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCACCTGCACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGATTCTGCACAGAAGGCTTCTGTCTGCGACCTCAGTGCCTAGGCACTGTCAGAGGATTGAGCTGTaGCAGAATTGCAATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QVILHRRLLSATSVPRHCQRIEL*QNCNQP Trigger: TGGCTGATTGCAATTCTGGCACAGCTCAATCCTCTG...ACAGTGCCTAGGCACTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCACCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| CDS-3UTR GCA 90 bp | GTGATTCTGCACAGAAGGCTTCTGTCTGCGACCTCAGTGCCTAGGCACTGTGCACAGAGGATTGAGCTGTaGCAGAATTGCAATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VILHRRLLSATSVPRHCAQRIEL*QNCNQP Trigger: TGGCTGATTGCAATTCTGGCACAGCTCAATCCTCTG...TGCACAGTGCCTAGGCACTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| CDS-3UTR GCA 90 bp | CATGGAAACAGCAGGCCTGGAACCTCCAGGTCAGGAGCAGAGAGAGAAGAAAGACAGAGGATTGAGCTGTaGCAGAATTGCAATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HGNSRPGTSRSGAEREERQRIEL*QNCNQP Trigger: TGGCTGATTGCAATTCTGGCACAGCTCAATCCTCTG...TCTTTCTTCTCTCTCTGCTCCTGACCTGGAGGTTCCAGGCCTGCTGTTTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| CDS-3UTR CCA 90 bp | AGTAACACATTTCCCGAAACAGTGGAGTGCAGACACATCTCAGAGGCAGCTACGAAGGCTGTGGTTCCATaGGGCTTGACTGAGATGAAC | + |
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Preference number: 4 (lower is better) Translates to: SNTFPETVECRHISEAATKAVVP*GLTEMN Trigger: GTTCATCTCAGTCAAGCCCCATGGAACCACAGCCTT...CGTAGCTGCCTCTGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236867.2 |
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| CDS-3UTR TCA 90 bp | AGAGTAACACATTTCCCGAAACAGTGGAGTGCAGACACATCTCAGAGGCAGCTAGTCCAAACAGAGGATTaGGCTGTGCCAGAATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RVTHFPKQWSADTSQRQLVQTED*AVPELQ Trigger: TTGCAATTCTGGCACAGCTCAATCCTCTGTTTGGAC...TAGCTGCCTCTGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015719.16 ENSMUST00000236867.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAGATATGGCTTAGTTTCTTTAAGAACACTGGCTGCTTTCTTGAGTCTGTCCAAACAGAGGATTaGGCTGTGCCAGAATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RLEIWLSFFKNTGCFLESVQTED*AVPELQ Trigger: TTGCAATTCTGGCACAGCTCAATCCTCTGTTTGGAC...AGACTCAAGAAAGCAGCCAGTGTTCTTAAAGAAACTAAGCCATATCTCCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| 3UTR CAA 72 bp | CTGGTCTCAGCATCAAATGAAAGCTTCCGTCTTGAGTaGACTTCCTCTTTGTTTTGGAGTCACTCTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LVSASNESFRLE*TSSLFWSHSVA Trigger: AGCTACAGAGTGACTCCAAAACAAAGAGGAAGTCAACTCAAGACGGAAGCTTTCATTTGATGCTGAGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| CDS-3UTR CCA 90 bp | CTTCAAGATAAGAGTAACACATTTCCCGAAACAGTGGAGTGCAGACACATCTCAACCAGCAGAGTTTTCTaGAAAGAACTTAGGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: LQDKSNTFPETVECRHISTSRVF*KELRPI Trigger: AATGGGCCTAAGTTCTTTCCAGAAAACTCTGCTGGT...TGAGATGTGTCTGCACTCCACTGTTTCGGGAAATGTGTTACTCTTATCTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236867.2 |
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| 3UTR CAA 72 bp | TCCAGGACAGCCAAGGCTACACAAAGAAACCGGGTCTaGCAAACAAACAAAAATAAACAAAAACAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: SRTAKATQRNRV*QTNKNKQKQNK Trigger: TTTGTTCTGTTTTTGTTTATTTTTGTTTGTTTGCAAGACCCGGTTTCTTTGTGTAGCCTTGGCTGTCCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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| CDS-3UTR CAA 90 bp | CAGGTGATTCTGCACAGAAGGCTTCTGTCTGCGACCTCAGTGCCTAGGCACTGTGGTCCAAACAGAGGATaGAGCTGTGCCAGAATTGCA | + |
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Preference number: 5 (lower is better) Translates to: QVILHRRLLSATSVPRHCGPNRG*SCARIA Trigger: TGCAATTCTGGCACAGCTCAATCCTCTGTTTGGACC...ACAGTGCCTAGGCACTGAGGTCGCAGACAGAAGCCTTCTGTGCAGAATCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| CDS-3UTR CAA 90 bp | GGAAGATCTTCAAGTGTAAGGCAGGTAACGCCCGAAGTGGGCTATGGAGGAAGGGGTCCAAACAGAGGATaGAGCTGTGCCAGAATTGCA | + |
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Preference number: 5 (lower is better) Translates to: GRSSSVRQVTPEVGYGGRGPNRG*SCARIA Trigger: TGCAATTCTGGCACAGCTCAATCCTCTGTTTGGACC...CCTTCCTCCATAGCCCACTTCGGGCGTTACCTGCCTTACACTTGAAGATCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| CDS-3UTR CAA 90 bp | ATGCAGAGGAAGATCTTCAAGTGTAAGGCAGGTAACGCCCGAAGTGGGCTATGGGGTCCAAACAGAGGATaGAGCTGTGCCAGAATTGCA | + |
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Preference number: 5 (lower is better) Translates to: MQRKIFKCKAGNARSGLWGPNRG*SCARIA Trigger: TGCAATTCTGGCACAGCTCAATCCTCTGTTTGGACC...CCATAGCCCACTTCGGGCGTTACCTGCCTTACACTTGAAGATCTTCCTCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015719.16 ENSMUST00000236346.2 ENSMUST00000236867.2 |
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| CDS-3UTR CAA 90 bp | TCTTTAAGAACACTGGCTGCTTTCTTGAGTCTGGCTCCCAGCACCCATATGGTAGGTCCAAACAGAGGATaGAGCTGTGCCAGAATTGCA | + |
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Preference number: 5 (lower is better) Translates to: SLRTLAAFLSLAPSTHMVGPNRG*SCARIA Trigger: TGCAATTCTGGCACAGCTCAATCCTCTGTTTGGACC...TACCATATGGGTGCTGGGAGCCAGACTCAAGAAAGCAGCCAGTGTTCTTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167352.2 |
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