Pregenerated sensors for ATP6V0D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028238Ensembl transcript IDs: ENSMUST00000029900.6
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TGGTTGAGAAGGTGTGTTGGTCTGGGCAGGAGGCAGCTGGGTAAATaGCATCTGCAGTCAAGGAGTAGGCACTTGGCTTTCTTCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: WLRRCVGLGRRQLGK*HLQSRSRHLAFFLV Trigger: AACTAAGAAGAAAGCCAAGTGCCTACTCCTTGACTGCAGATGCAATTTACCCAGCTGCCTCCTGCCCAGACCAACACACCTTCTCAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR TCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCAGCTTTGCATTTTCGTaGATGCATGGAAGGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: DDLVVLQFPPSICEIPGISFAFS*MHGRTK Trigger: TTTGGTCCTTCCATGCATTCACGAAAATGCAAAGCT...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR GCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCTTGCATTTTCGTGAATaGATGGAAGGACCAAACACG | + |
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Preference number: 2 (lower is better) Translates to: DDLVVLQFPPSICEIPGILHFRE*MEGPNT Trigger: CGTGTTTGGTCCTTCCATGCATTCACGAAAATGCAA...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR CCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCACGACTGGGGCTTGTTaGAAACAAGAAAGGCATATT | + |
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Preference number: 2 (lower is better) Translates to: DDLVVLQFPPSICEIPGITTGAC*KQERHI Trigger: AATATGCCTTTCTTGTTTCCAACAAGCCCCAGTCGT...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR TCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCTTTAGTCTGACCAAATaGGAATACAAAAAGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: DDLVVLQFPPSICEIPGIFSLTK*EYKKCH Trigger: GTGGCACTTTTTGTATTCTCATTTGGTCAGACTAAA...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR CCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCTGGACATGTAGTTTATaGAAAGGTGGTATGACTTAC | + |
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Preference number: 2 (lower is better) Translates to: DDLVVLQFPPSICEIPGIWTCSL*KGGMTY Trigger: GTAAGTCATACCACCTTTCCATAAACTACATGTCCA...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CAA 90 bp | AGGAGGCAGCTGGGTAAATTGCATCTGCAGTCAAGGAGTAGGCACTaGGCTTTCTTCTTAGTTCAACAAAACATTATTTTTGTTATATTT | + |
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Preference number: 2 (lower is better) Translates to: RRQLGKLHLQSRSRH*AFFLVQQNIIFVIF Trigger: AAATATAACAAAAATAATGTTTTGTTGAACTAAGAAGAAAGCCAAGTGCCTACTCCTTGACTGCAGATGCAATTTACCCAGCTGCCTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR GCA 72 bp | GGTGTGTTGGTCTGGGCAGGAGGCAGCTGGGTAAATTaGATCTGCAGTCAAGGAGTAGGCACTTGGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: GVLVWAGGSWVN*ICSQGVGTWLS Trigger: AGAAAGCCAAGTGCCTACTCCTTGACTGCAGATGCAATTTACCCAGCTGCCTCCTGCCCAGACCAACACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCAAGCAGTGTTTGAGCTaGGGGAGAAGAACGGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LGERKGTCLHQAWCMLATKQCLS*GRRTEK Trigger: CTTTTCCGTTCTTCTCCCCAAGCTCAAACACTGCTT...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CCA 72 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATaGTGTATGTTAGCTACCCACAGCTTTGCATTTTCG | + |
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Preference number: 3 (lower is better) Translates to: LGERKGTCLHQA*CMLATHSFAFS Trigger: CGAAAATGCAAAGCTGTGGGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCAACGACTGGGGCTTGTaGGAAACAAGAAAGGCATAT | + |
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Preference number: 3 (lower is better) Translates to: LGERKGTCLHQAWCMLATNDWGL*ETRKAY Trigger: ATATGCCTTTCTTGTTTCCAACAAGCCCCAGTCGTT...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR-3UTR CAA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCTCTTTCTCAAAAGTCTaGGGGGAAAGGAAGGGAACG | + |
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Preference number: 3 (lower is better) Translates to: DDLVVLQFPPSICEIPGISFSKV*GERKGT Trigger: CGTTCCCTTCCTTTCCCCCAAGACTTTTGAGAAAGA...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CCA 72 bp | ACAAGAAAGGCATATTTTGTTTCAAGTTCTGTTTACTaGGCTTCCAGTGGACATGTAGTTTATGGAAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: TRKAYFVSSSVY*ASSGHVVYGKV Trigger: CACCTTTCCATAAACTACATGTCCACTGGAAGCCCAGTAAACAGAACTTGAAACAAAATATGCCTTTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CCA 72 bp | ATATTTTGTTTCAAGTTCTGTTTACTGGGCTTCCAGTaGACATGTAGTTTATGGAAAGGTGGTATGACTTAC | + |
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Preference number: 3 (lower is better) Translates to: IFCFKFCLLGFQ*TCSLWKGGMTY Trigger: GTAAGTCATACCACCTTTCCATAAACTACATGTCCACTGGAAGCCCAGTAAACAGAACTTGAAACAAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CAA 72 bp | AGGTGTGTTGGTCTGGGCAGGAGGCAGCTGGGTAAATaGCATCTGCAGTCAAGGAGTAGGCACTTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RCVGLGRRQLGK*HLQSRSRHLAF Trigger: GAAAGCCAAGTGCCTACTCCTTGACTGCAGATGCAATTTACCCAGCTGCCTCCTGCCCAGACCAACACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCGCTGAGTTAGGAGGCTaGCTTTGCATCCTCGAACCA | + |
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Preference number: 4 (lower is better) Translates to: LGERKGTCLHQAWCMLATAELGG*LCILEP Trigger: TGGTTCGAGGATGCAAAGCCAGCCTCCTAACTCAGC...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CCA 90 bp | TGTGACACAATCCCCCTTCCTTTCCTCAATAACTTCATGGCAACATGTATGATCAGAGCCTGCCGCAGGTaGGGAAGAGGGTCTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: CDTIPLPFLNNFMATCMIRACRR*GRGSPC Trigger: ACAGGGAGACCCTCTTCCCCACCTGCGGCAGGCTCT...GATCATACATGTTGCCATGAAGTTATTGAGGAAAGGAAGGGGGATTGTGTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTCAACCAGCACAGCCTTaGAGAGATCTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QFPPSICEIPGIELMELTQPAQP*RDLRGS Trigger: AGACCCCCTCAGATCTCTTCAAGGCTGTGCTGGTTG...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCGGGACACATAACGTCTaGTGTGACATCACCGTGATC | + |
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Preference number: 4 (lower is better) Translates to: LGERKGTCLHQAWCMLATGTHNV*CDITVI Trigger: GATCACGGTGATGTCACAGCAGACGTTATGTGTCCC...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTAGCCATGGTCCACATTaGAGTACAGCTCTGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QFPPSICEIPGIELMELTSHGPH*STALQS Trigger: AGACTGCAGAGCTGTACTTCAATGTGGACCATGGCT...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTTCCGTGGTCTGGAGATaGATTTTCAGGTCTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: QFPPSICEIPGIELMELTSVVWR*IFRSSK Trigger: CTTGGAAGACCTGAAAATTCATCTCCAGACCACGGA...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCAATGGAATTGCCTGTTaGATGCCAGCACATTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LGERKGTCLHQAWCMLATNGIAC*MPAHSS Trigger: AGATGAATGTGCTGGCATTCAACAGGCAATTCCATT...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTAGTTCGATGCCTCTGTaGGATGCATTCTGCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: QFPPSICEIPGIELMELTSSMPL*DAFCYP Trigger: TGGATAGCAGAATGCATCTCACAGAGGCATCGAACT...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCAGTTGCCATAGTCCGTaGTCTGGAGATGAATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LGERKGTCLHQAWCMLATSCHSP*SGDEFS Trigger: TGAAAATTCATCTCCAGACCACGGACTATGGCAACT...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | TGTTTACTGGGCTTCCAGTGGACATGTAGTTTATGGAAAGGTGGTATGACTTACTGCATGTCATGTAGGTaGGAAATGTGCTCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CLLGFQWTCSLWKGGMTYCMSCR*EMCSGA Trigger: AGCCCCTGAGCACATTTCTCACCTACATGACATGCA...GTAAGTCATACCACCTTTCCATAAACTACATGTCCACTGGAAGCCCAGTAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCTCAAAGTCTTCAGCTTaGGCTAACAACCGCAACCCC | + |
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Preference number: 4 (lower is better) Translates to: DDLVVLQFPPSICEIPGISKSSA*ANNRNP Trigger: GGGGTTGCGGTTGTTAGCTCAAGCTGAAGACTTTGA...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | TGGAAACAAGAAAGGCATATTTTGTTTCAAGTTCTGTTTACTGGGCTTCCAGTGTTAGGAGGCTGGCTTTaGATCCTCGAACCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: WKQERHILFQVLFTGLPVLGGWL*ILEPGP Trigger: AGGGCCTGGTTCGAGGATGCAAAGCCAGCCTCCTAA...CACTGGAAGCCCAGTAAACAGAACTTGAAACAAAATATGCCTTTCTTGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CAA 72 bp | AGTTTAGAAAGGGAAGGGTTTCTTTTGGGTCAGGGTTaGAGAGGACAGTCTAAGGTGGTTGAGAAGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLEREGFLLGQG*RGQSKVVEKVC Trigger: ACACACCTTCTCAACCACCTTAGACTGTCCTCTCAAACCCTGACCCAAAAGAAACCCTTCCCTTTCTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR TCA 90 bp | TTGGGGGAAAGGAAGGGAACGTGTCTTCACCAAGCATGGTGTATGTTAGCTACCTCAGACATACAATCTTaGAAGAATGGAGCTAATGGT | + |
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Preference number: 4 (lower is better) Translates to: LGERKGTCLHQAWCMLATSDIQS*KNGANG Trigger: ACCATTAGCTCCATTCTTTCAAGATTGTATGTCTGA...GGTAGCTAACATACACCATGCTTGGTGAAGACACGTTCCCTTCCTTTCCCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | TGTGACACAATCCCCCTTCCTTTCCTCAATAACTTCATGGCAACATGTATGATCGATGCCTCTGTGAGATaGATTCTGCTATCCACACGA | + |
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Preference number: 4 (lower is better) Translates to: CDTIPLPFLNNFMATCMIDASVR*ILLSTR Trigger: TCGTGTGGATAGCAGAATGCATCTCACAGAGGCATC...GATCATACATGTTGCCATGAAGTTATTGAGGAAAGGAAGGGGGATTGTGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCCCAGTGGGTGACACTTaGCTAGAACTTCTTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: DDLVVLQFPPSICEIPGIPVGDT*LELLSQ Trigger: CTGTGAAAGAAGTTCTAGCCAAGTGTCACCCACTGG...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CAA 72 bp | ACGACTGGGGCTTGTTGGAAACAAGAAAGGCATATTTaGTTTCAAGTTCTGTTTACTGGGCTTCCAGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TTGACWKQERHI*FQVLFTGLPVD Trigger: GTCCACTGGAAGCCCAGTAAACAGAACTTGAAACAAAATATGCCTTTCTTGTTTCCAACAAGCCCCAGTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTGCAGAATTTGTAGAATaGCTCAAGGTAAGACTTGTA | + |
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Preference number: 4 (lower is better) Translates to: QFPPSICEIPGIELMELTAEFVE*LKVRLV Trigger: TACAAGTCTTACCTTGAGGCATTCTACAAATTCTGC...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCTCTCCCTGTCTTCTTTaGTTAGTTCAGTGCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: DDLVVLQFPPSICEIPGISPCLL*LVQCQM Trigger: CATTTGGCACTGAACTAAGCAAAGAAGACAGGGAGA...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCAATAGTCAAACTCTCTaGAGAGCTTCTTCCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: DDLVVLQFPPSICEIPGINSQTL*RASSSS Trigger: AGATGAGGAAGAAGCTCTGCAGAGAGTTTGACTATT...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | GATGATCTTGTAGTTTTGCAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCAACTCCATAATTATCTaGCACTCTCTTCATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: DDLVVLQFPPSICEIPGINSIII*HSLHLL Trigger: GAGCAGATGAAGAGAGTGGCAGATAATTATGGAGTT...GATTCCTGGAATCTCACATATGGAAGGAGGGAACTGCAAAACTACAAGATCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | TGGAAACAAGAAAGGCATATTTTGTTTCAAGTTCTGTTTACTGGGCTTCCAGTGGAATTGCCTGTTGAATaGCAGCACATTCATCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: WKQERHILFQVLFTGLPVELPVE*QHIHLY Trigger: GTACAGATGAATGTGCTGGCATTCAACAGGCAATTC...CACTGGAAGCCCAGTAAACAGAACTTGAAACAAAATATGCCTTTCTTGTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR GCA 90 bp | TGGAAACAAGAAAGGCATATTTTGTTTCAAGTTCTGTTTACTGGGCTTCCAGTGTTGATTTTAGTTCGATaGCTCTGTGAGATGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: WKQERHILFQVLFTGLPVLILVR*LCEMHS Trigger: AGAATGCATCTCACAGAGGCATCGAACTAAAATCAA...CACTGGAAGCCCAGTAAACAGAACTTGAAACAAAATATGCCTTTCTTGTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| 3UTR CAA 72 bp | CTGGGTAAATTGCATCTGCAGTCAAGGAGTAGGCACTaGGCTTTCTTCTTAGTTCAACAAAACATTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LGKLHLQSRSRH*AFFLVQQNIIF Trigger: AAAAATAATGTTTTGTTGAACTAAGAAGAAAGCCAAGTGCCTACTCCTTGACTGCAGATGCAATTTACCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CCA 90 bp | CTTGAGCTAACAACCGCAACCCCTCTGGATAGAGCCTGCCGCAGGTaGGGAAGAGGGTCTCCCTGTCTTCTTTGCTTAGTTCAGTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LELTTATPLDRACRR*GRGSPCLLCLVQCQ Trigger: TTGGCACTGAACTAAGCAAAGAAGACAGGGAGACCCTCTTCCCCACCTGCGGCAGGCTCTATCCAGAGGGGTTGCGGTTGTTAGCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS GCA 90 bp | AGTCTTCAGCTTGAGCTAACAACCGCAACCCCTCTGGATAGAGCCTaGCGCAGGTGGGGAAGAGGGTCTCCCTGTCTTCTTTGCTTAGTT | + |
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Preference number: 5 (lower is better) Translates to: SLQLELTTATPLDRA*RRWGRGSPCLLCLV Trigger: AACTAAGCAAAGAAGACAGGGAGACCCTCTTCCCCACCTGCGGCAGGCTCTATCCAGAGGGGTTGCGGTTGTTAGCTCAAGCTGAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CAA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTGTTAGGAGGCTGGCTTaGCATCCTCGAACCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QFPPSICEIPGIELMELTVRRLA*HPRTRP Trigger: GGGCCTGGTTCGAGGATGCAAAGCCAGCCTCCTAAC...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS GCA 90 bp | AGCGCGTCTGTCGGCCTCAAACTCAAGAATGGGACACATAACGTCTaGTGTGACATCACCGTGATCCTTGCAGAATTTGTAGAATGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SASVGLKLKNGTHNV*CDITVILAEFVECL Trigger: GAGGCATTCTACAAATTCTGCAAGGATCACGGTGATGTCACAGCAGACGTTATGTGTCCCATTCTTGAGTTTGAGGCCGACAGACGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 90 bp | GGAGATGAATTTTCAGGTCTTCCAAGGTCTCACACTGCACTAGGTTaGCATAGTCCTGCTGAGTTAGGAGGCTGGCTTTGCATCCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: GDEFSGLPRSHTALG*HSPAELGGWLCILE Trigger: TTCGAGGATGCAAAGCCAGCCTCCTAACTCAGCAGGACTATGTCAACCTAGTGCAGTGTGAGACCTTGGAAGACCTGAAAATTCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CAA 90 bp | CAGTTCCCTCCTTCCATATGTGAGATTCCAGGAATCGAACTCATGGAGTTGACTGGGGTCTCTGCAATGTaGACAGCTTCCATCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QFPPSICEIPGIELMELTGVSAM*TASISV Trigger: CACAGAGATGGAAGCTGTCAACATTGCAGAGACCCC...AGTCAACTCCATGAGTTCGATTCCTGGAATCTCACATATGGAAGGAGGGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 90 bp | TCTGCAATGTTGACAGCTTCCATCTCTGTGAAACGGCCCAGTGGGTaGCACTTGGCTAGAACTTCTTTCACAGATTTCTTTTGCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SAMLTASISVKRPSG*HLARTSFTDFFCKA Trigger: GGCCTTGCAAAAGAAATCTGTGAAAGAAGTTCTAGCCAAGTGTCACCCACTGGGCCGTTTCACAGAGATGGAAGCTGTCAACATTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CAA 90 bp | CAGAACCACTGGTATACATATCGATATAAGTTATTCATCCTTCTGTCTGTCTGTTCAACCAGCACAGCCTaGAAGAGATCTGAGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QNHWYTYRYKLFILLSVCSTSTA*KRSEGV Trigger: GACCCCCTCAGATCTCTTCAAGGCTGTGCTGGTTGA...ACAGACAGACAGAAGGATGAATAACTTATATCGATATGTATACCAGTGGTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CAA 90 bp | TGTTTACTGGGCTTCCAGTGGACATGTAGTTTATGGAAAGGTGGTATGACTTACCACACCATAATGGAATaGCCTGTTGAATGCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: CLLGFQWTCSLWKGGMTYHTIME*PVECQH Trigger: GTGCTGGCATTCAACAGGCAATTCCATTATGGTGTG...GTAAGTCATACCACCTTTCCATAAACTACATGTCCACTGGAAGCCCAGTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS-3UTR CAA 90 bp | TGTTTACTGGGCTTCCAGTGGACATGTAGTTTATGGAAAGGTGGTATGACTTACATCTCCGTGTCAATTTaGGAAACAGTGAGAGGATTT | + |
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Preference number: 5 (lower is better) Translates to: CLLGFQWTCSLWKGGMTYISVSI*ETVRGF Trigger: AAATCCTCTCACTGTTTCCAAAATTGACACGGAGAT...GTAAGTCATACCACCTTTCCATAAACTACATGTCCACTGGAAGCCCAGTAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 90 bp | TCAACTTTACATACGCATAAAACACACCATAATGGAATTGCCTGTTaGATGCCAGCACATTCATCTGTACCTCTCTCTCATAGAAAACGT | + |
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Preference number: 5 (lower is better) Translates to: STLHTHKTHHNGIAC*MPAHSSVPLSHRKR Trigger: ACGTTTTCTATGAGAGAGAGGTACAGATGAATGTGCTGGCATTCAACAGGCAATTCCATTATGGTGTGTTTTATGCGTATGTAAAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 90 bp | AATTCAATATTCAGTTCATCAAGAGTGTTTTCAGACATACAATCTTaGAAGAATGGAGCTAATGGTGTTTCAACCAGCACAGCCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: NSIFSSSRVFSDIQS*KNGANGVSTSTALK Trigger: CTTCAAGGCTGTGCTGGTTGAAACACCATTAGCTCCATTCTTTCAAGATTGTATGTCTGAAAACACTCTTGATGAACTGAATATTGAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS GCA 72 bp | CTTGAGCTAACAACCGCAACCCCTCTGGATAGAGCCTaGCGCAGGTGGGGAAGAGGGTCTCCCTGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LELTTATPLDRA*RRWGRGSPCLL Trigger: AAGAAGACAGGGAGACCCTCTTCCCCACCTGCGGCAGGCTCTATCCAGAGGGGTTGCGGTTGTTAGCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CCA 72 bp | ACAACCGCAACCCCTCTGGATAGAGCCTGCCGCAGGTaGGGAAGAGGGTCTCCCTGTCTTCTTTGCTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: TTATPLDRACRR*GRGSPCLLCLV Trigger: AACTAAGCAAAGAAGACAGGGAGACCCTCTTCCCCACCTGCGGCAGGCTCTATCCAGAGGGGTTGCGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CAA 72 bp | ACAGCCTTGAAGAGATCTGAGGGGGTCTCTGCAATGTaGACAGCTTCCATCTCTGTGAAACGGCCCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TALKRSEGVSAM*TASISVKRPSG Trigger: CCCACTGGGCCGTTTCACAGAGATGGAAGCTGTCAACATTGCAGAGACCCCCTCAGATCTCTTCAAGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CAA 72 bp | CTGCCGCAGGTGGGGAAGAGGGTCTCCCTGTCTTCTTaGCTTAGTTCAGTGCCAAATGAGTTCAGAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: LPQVGKRVSLSS*LSSVPNEFRVM Trigger: CATCACTCTGAACTCATTTGGCACTGAACTAAGCAAAGAAGACAGGGAGACCCTCTTCCCCACCTGCGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 72 bp | TTTTCAGGTCTTCCAAGGTCTCACACTGCACTAGGTTaGCATAGTCCTGCTGAGTTAGGAGGCTGGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: FSGLPRSHTALG*HSPAELGGWLC Trigger: GCAAAGCCAGCCTCCTAACTCAGCAGGACTATGTCAACCTAGTGCAGTGTGAGACCTTGGAAGACCTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS GCA 72 bp | GTCGGCCTCAAACTCAAGAATGGGACACATAACGTCTaGTGTGACATCACCGTGATCCTTGCAGAATTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VGLKLKNGTHNV*CDITVILAEFV Trigger: TACAAATTCTGCAAGGATCACGGTGATGTCACAGCAGACGTTATGTGTCCCATTCTTGAGTTTGAGGCCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CAA 72 bp | AAGAATGGAGCTAATGGTGTTTCAACCAGCACAGCCTaGAAGAGATCTGAGGGGGTCTCTGCAATGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: KNGANGVSTSTA*KRSEGVSAMLT Trigger: TGTCAACATTGCAGAGACCCCCTCAGATCTCTTCAAGGCTGTGCTGGTTGAAACACCATTAGCTCCATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 72 bp | TTGACAGCTTCCATCTCTGTGAAACGGCCCAGTGGGTaGCACTTGGCTAGAACTTCTTTCACAGATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTASISVKRPSG*HLARTSFTDFF Trigger: AAAGAAATCTGTGAAAGAAGTTCTAGCCAAGTGTCACCCACTGGGCCGTTTCACAGAGATGGAAGCTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 72 bp | TTATATTGTCTATCATATAGCTGCATGTCATGTAGGTaGGAAATGTGCTCAGGGGCTCCAAGGAATGATTCC | + |
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Preference number: 6 (lower is better) Translates to: LYCLSYSCMSCR*EMCSGAPRNDS Trigger: GGAATCATTCCTTGGAGCCCCTGAGCACATTTCTCACCTACATGACATGCAGCTATATGATAGACAATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS TCA 72 bp | CATACGCATAAAACACACCATAATGGAATTGCCTGTTaGATGCCAGCACATTCATCTGTACCTCTCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HTHKTHHNGIAC*MPAHSSVPLSH Trigger: ATGAGAGAGAGGTACAGATGAATGTGCTGGCATTCAACAGGCAATTCCATTATGGTGTGTTTTATGCGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CAA 90 bp | TTGCTCCTTCAACTTTACATACGCATAAAACACACCATAATGGAATaGCCTGTTGAATGCCAGCACATTCATCTGTACCTCTCTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: LLLQLYIRIKHTIME*PVECQHIHLYLSLI Trigger: TATGAGAGAGAGGTACAGATGAATGTGCTGGCATTCAACAGGCAATTCCATTATGGTGTGTTTTATGCGTATGTAAAGTTGAAGGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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| CDS CAA 72 bp | CAACTTTACATACGCATAAAACACACCATAATGGAATaGCCTGTTGAATGCCAGCACATTCATCTGTACCTC | + |
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Preference number: 6 (lower is better) Translates to: QLYIRIKHTIME*PVECQHIHLYL Trigger: GAGGTACAGATGAATGTGCTGGCATTCAACAGGCAATTCCATTATGGTGTGTTTTATGCGTATGTAAAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029900.6 |
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