Pregenerated sensors for ATP6V0C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024121Ensembl transcript IDs: ENSMUST00000024932.12, ENSMUST00000098862.9
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTCTATCCTCCACCCTGGCTGTTCAGGGCAGGGGGAAGGGTGGCTCCATCCAAGCACTGGTCAGGGGCCTaGGTGGGAGATGAGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LYPPPWLFRAGGRVAPSKHWSGA*VGDEWA Trigger: GGCCCACTCATCTCCCACCCAGGCCCCTGACCAGTG...CTTGGATGGAGCCACCCTTCCCCCTGCCCTGAACAGCCAGGGTGGAGGATAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| 3UTR-3UTR CCA 90 bp | CACAGCTGGGAGCCAGCTCTGAGGAGCAGTAGCACTCTATCCTCCACCCTGGCTGGTCAGGGGCCTGGGTaGGAGATGAGTGGGCCCGTA | + |
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Preference number: 2 (lower is better) Translates to: HSWEPALRSSSTLSSTLAGQGPG*EMSGPV Trigger: TACGGGCCCACTCATCTCCCACCCAGGCCCCTGACC...AGCCAGGGTGGAGGATAGAGTGCTACTGCTCCTCAGAGCTGGCTCCCAGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| 3UTR-3UTR TCA 90 bp | GCCCGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATTACAAGACCAACTACTaGGGGGCAGCTGCCCGTGCA | + |
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Preference number: 2 (lower is better) Translates to: ARMSTARCSRGKAGATDNYKTNY*GAAARA Trigger: TGCACGGGCAGCTGCCCCTCAGTAGTTGGTCTTGTA...ATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGCTGGGAGCCAGCTCTGAGGAGCAGTAGCACTCTATCCTCCACCCTGGCTATGTCCACAGCACGGTaGAGTAGGGGCAAGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: HSWEPALRSSSTLSSTLAMSTAR*SRGKAG Trigger: CCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACAT...AGCCAGGGTGGAGGATAGAGTGCTACTGCTCCTCAGAGCTGGCTCCCAGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTATCCTCCACCCTGGCTGTTCAGGGCAGGGGGAAGGGTGGCTCCATCCAAGTGGGTGGGAGATGAGTaGGCCCGTATGTCCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: LYPPPWLFRAGGRVAPSKWVGDE*ARMSTA Trigger: TGCTGTGGACATACGGGCCCACTCATCTCCCACCCA...CTTGGATGGAGCCACCCTTCCCCCTGCCCTGAACAGCCAGGGTGGAGGATAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| 3UTR-3UTR TCA 90 bp | GATTACTATATAGTTGGGAGACAGGAGCTGCTCCACAGACGCATGAATAGGTCATACAAGACCAACTACTaGGGGGCAGCTGCCCGTGCA | + |
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Preference number: 2 (lower is better) Translates to: DYYIVGRQELLHRRMNRSYKTNY*GAAARA Trigger: TGCACGGGCAGCTGCCCCTCAGTAGTTGGTCTTGTA...TGACCTATTCATGCGTCTGTGGAGCAGCTCCTGTCTCCCAACTATATAGTAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| 3UTR TCA 72 bp | CGAGAACTTTTATTGGACACAGCTGGGAGCCAGCTCTaGGGAGCAGTAGCACTCTATCCTCCACCCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RELLLDTAGSQL*GAVALYPPPWL Trigger: CAGCCAGGGTGGAGGATAGAGTGCTACTGCTCCTCAGAGCTGGCTCCCAGCTGTGTCCAATAAAAGTTCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR TCA 90 bp | GCCCGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATCGGCTCCCATGGCGCTaGAGACCATGGCGGACGAGG | + |
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Preference number: 4 (lower is better) Translates to: ARMSTARCSRGKAGATDNRLPWR*RPWRTR Trigger: CCTCGTCCGCCATGGTCTTCAGCGCCATGGGAGCCG...ATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR GCA 90 bp | CGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGGAGGCTGCTGGGCAGTaGCCCGAACACCAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RMSTARCSRGKAGATDNGEAAGQ*PEHQHL Trigger: GAGATGCTGGTGTTCGGGGCACTGCCCAGCAGCCTC...CCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR GCA 90 bp | GTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGCGAGGCTGCTGGGCAGTaGCCCGAACACCAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: VCPQHGAVGARRGRQTMGEAAGQ*PEHQHL Trigger: GAGATGCTGGTGTTCGGGGCACTGCCCAGCAGCCTC...GCCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR TCA 90 bp | AGCTGGGAGCCAGCTCTGAGGAGCAGTAGCACTCTATCCTCCACCCTGGCTGTTCGGCTCCCATGGCGCTaGAGACCATGGCGGACGAGG | + |
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Preference number: 4 (lower is better) Translates to: SWEPALRSSSTLSSTLAVRLPWR*RPWRTR Trigger: CCTCGTCCGCCATGGTCTTCAGCGCCATGGGAGCCG...AACAGCCAGGGTGGAGGATAGAGTGCTACTGCTCCTCAGAGCTGGCTCCCAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR GCA 90 bp | GTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGCTGCCACTCTTGGCTGTaGCATAGGCGGCTCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: VCPQHGAVGARRGRQTMGCHSWL*HRRLPW Trigger: CCATGGGAGCCGCCTATGGCACAGCCAAGAGTGGCA...GCCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR CCA 90 bp | CGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGTGCCAGTGCCACTCTTaGCTGTGCCATAGGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RMSTARCSRGKAGATDNGCQCHS*LCHRRL Trigger: GAGCCGCCTATGGCACAGCCAAGAGTGGCACTGGCA...CCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR CCA 90 bp | GTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGCTGCCAGTGCCACTCTTaGCTGTGCCATAGGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VCPQHGAVGARRGRQTMGCQCHS*LCHRRL Trigger: GAGCCGCCTATGGCACAGCCAAGAGTGGCACTGGCA...GCCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR CCA 90 bp | GCCCGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATCTCCGACGATGCCAATaGCAAAGCCAGCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ARMSTARCSRGKAGATDNLRRCQ*QSQQPG Trigger: GCCTGGCTGCTGGCTTTGCCATTGGCATCGTCGGAG...ATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR CCA 90 bp | GTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGCCTCCGACGATGCCAATaGCAAAGCCAGCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VCPQHGAVGARRGRQTMGLRRCQ*QSQQPG Trigger: GCCTGGCTGCTGGCTTTGCCATTGGCATCGTCGGAG...GCCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR CCA 90 bp | GGCGATGGGTGGGGTAACCAGAGGCTGACTTCGTCACTGGTCAGGGGCCTGGGTAACAGTCGAGGCTGCTaGGCAGTGCCCCGAACACCA | + |
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Preference number: 4 (lower is better) Translates to: GDGWGNQRLTSSLVRGLGNSRGC*AVPRTP Trigger: TGGTGTTCGGGGCACTGCCCAGCAGCCTCGACTGTT...ACCCAGGCCCCTGACCAGTGACGAAGTCAGCCTCTGGTTACCCCACCCATCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR GCA 90 bp | GCCCGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATTGGCTGCGATGCCAGTaGCACTCTTGGCTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ARMSTARCSRGKAGATDNWLRCQ*HSWLCH Trigger: ATGGCACAGCCAAGAGTGGCACTGGCATCGCAGCCA...ATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR TCA 90 bp | CGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATGGGCGGACGAGGCGCCCATaGCACCGAAAAACGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: RMSTARCSRGKAGATDNGRTRRP*HRKTKN Trigger: ATTCTTCGTTTTTCGGTGTCATGGGCGCCTCGTCCG...CCCATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR TCA 90 bp | CTCTATCCTCCACCCTGGCTGTTCAGGGCAGGGGGAAGGGTGGCTCCATCCAAGAACTCCTGTAGAGGGTaGTGCCATCAGTCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LYPPPWLFRAGGRVAPSKNSCRG*CHQSGS Trigger: ACTCCCTGACTGATGGCATCACCCTCTACAGGAGTT...CTTGGATGGAGCCACCCTTCCCCCTGCCCTGAACAGCCAGGGTGGAGGATAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR GCA 90 bp | GATTACTATATAGTTGGGAGACAGGAGCTGCTCCACAGACGCATGAATAGGTCATGGCTGCGATGCCAGTaGCACTCTTGGCTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DYYIVGRQELLHRRMNRSWLRCQ*HSWLCH Trigger: ATGGCACAGCCAAGAGTGGCACTGGCATCGCAGCCA...TGACCTATTCATGCGTCTGTGGAGCAGCTCCTGTCTCCCAACTATATAGTAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR GCA 90 bp | CAACAGTCTACTAATGATTACTATATAGTTGGGAGACAGGAGCTGCTCCACAGATGCCACTCTTGGCTGTaGCATAGGCGGCTCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QQSTNDYYIVGRQELLHRCHSWL*HRRLPW Trigger: CCATGGGAGCCGCCTATGGCACAGCCAAGAGTGGCA...TCTGTGGAGCAGCTCCTGTCTCCCAACTATATAGTAATCATTAGTAGACTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR GCA 90 bp | GATTACTATATAGTTGGGAGACAGGAGCTGCTCCACAGACGCATGAATAGGTCACAGCATCTCCGACGATaGCAATGGCAAAGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DYYIVGRQELLHRRMNRSQHLRR*QWQSQQ Trigger: CTGCTGGCTTTGCCATTGGCATCGTCGGAGATGCTG...TGACCTATTCATGCGTCTGTGGAGCAGCTCCTGTCTCCCAACTATATAGTAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR TCA 90 bp | TCTACTAATGATTACTATATAGTTGGGAGACAGGAGCTGCTCCACAGACGCATGCGGACGAGGCGCCCATaGCACCGAAAAACGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: STNDYYIVGRQELLHRRMRTRRP*HRKTKN Trigger: ATTCTTCGTTTTTCGGTGTCATGGGCGCCTCGTCCG...CATGCGTCTGTGGAGCAGCTCCTGTCTCCCAACTATATAGTAATCATTAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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| CDS-3UTR CAA 90 bp | GCCCGTATGTCCACAGCACGGTGCAGTAGGGGCAAGGCGGGGGCGACAGACAATCAGGCCAGCACCCAGTaGAAGAAAACTCCTGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: ARMSTARCSRGKAGATDNQASTQ*KKTPVE Trigger: CTCTACAGGAGTTTTCTTCAACTGGGTGCTGGCCTG...ATTGTCTGTCGCCCCCGCCTTGCCCCTACTGCACCGTGCTGTGGACATACGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024932.12 ENSMUST00000098862.9 |
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| CDS-3UTR CAA 90 bp | TCTACTAATGATTACTATATAGTTGGGAGACAGGAGCTGCTCCACAGACGCATGCAGGCCAGCACCCAGTaGAAGAAAACTCCTGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: STNDYYIVGRQELLHRRMQASTQ*KKTPVE Trigger: CTCTACAGGAGTTTTCTTCAACTGGGTGCTGGCCTG...CATGCGTCTGTGGAGCAGCTCCTGTCTCCCAACTATATAGTAATCATTAGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024932.12 |
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