Pregenerated sensors for ATP6V0A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038600Ensembl transcript IDs: ENSMUST00000040259.8, ENSMUST00000114908.5
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCAGACAGCCATTCAGAAGGACTGCAGCATGGGACACCTGGCCTaGGCTGATGTCAGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGC | + |
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Preference number: 1 (lower is better) Translates to: LQTAIQKDCSMGHLA*ADVRDKSESFFSCR Trigger: GCGACAGCTGAAGAAGCTCTCACTCTTGTCTCTGACATCAGCCCAGGCCAGGTGTCCCATGCTGCAGTCCTTCTGAATGGCTGTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR CCA 90 bp | TCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATGGGACACCTaGCCTGGGCTGATGTCAGAGACAAGAGTGAGAGCTTCTTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SHCRQPFRRTAAWDT*PGLMSETRVRASSA Trigger: AGCTGAAGAAGCTCTCACTCTTGTCTCTGACATCAGCCCAGGCCAGGTGTCCCATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATCACAGGAAGATGGTaGTCAAGTGTCATGTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: EEPEFKVKDILGRVVISRITGRW*SSVMSA Trigger: GGCGGACATGACACTTGACCACCATCTTCCTGTGAT...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGTGTCAGAGACAAGAGTaGGAGCTTCTTCAGCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKCQRQE*ELLQLS Trigger: CGACAGCTGAAGAAGCTCTCACTCTTGTCTCTGACA...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTGTCAGAGACAAGAGTaGGAGCTTCTTCAGCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: LNTAPYTASHCRQPFRRTCQRQE*ELLQLS Trigger: CGACAGCTGAAGAAGCTCTCACTCTTGTCTCTGACA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR CCA 72 bp | GCCATTCAGAAGGACTGCAGCATGGGACACCTGGCCTaGGCTGATGTCAGAGACAAGAGTGAGAGCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: AIQKDCSMGHLA*ADVRDKSESFF Trigger: GAAGAAGCTCTCACTCTTGTCTCTGACATCAGCCCAGGCCAGGTGTCCCATGCTGCAGTCCTTCTGAATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR CCA 72 bp | AGACAGCCATTCAGAAGGACTGCAGCATGGGACACCTaGCCTGGGCTGATGTCAGAGACAAGAGTGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: RQPFRRTAAWDT*PGLMSETRVRA Trigger: AGCTCTCACTCTTGTCTCTGACATCAGCCCAGGCCAGGTGTCCCATGCTGCAGTCCTTCTGAATGGCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR TCA 72 bp | CATCTCAGCATTTGGGAAGTAGAGGCAGGAGGAACCTaGGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: HLSIWEVEAGGT*VQSQGHPWPCG Trigger: ACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTCCTGCCTCTACTTCCCAAATGCTGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR GCA 72 bp | GTCCTGTTAAATACTGCACCATACACAGCTTCACACTaGAGACAGCCATTCAGAAGGACTGCAGCATGGGAC | + |
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Preference number: 3 (lower is better) Translates to: VLLNTAPYTASH*RQPFRRTAAWD Trigger: GTCCCATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| 3UTR CCA 72 bp | AACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTaGTTATTTCCAGAACAGTTAAAGCTAGAGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: NLSSKSRTSLAV*LFPEQLKLERP Trigger: AGGTCTCTCTAGCTTTAACTGTTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTGCAGCCGGAGGGCGTaGAGAAAGGCTGAGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHCSRRA*RKAERP Trigger: GGGTCTCTCAGCCTTTCTGCACGCCCTCCGGCTGCA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAGCCCTGCCCAGCCTTaGAGGCGAAGGCCGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRSPAQP*RRRPML Trigger: GAGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGCT...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAGGAGGATGGCCACGGTaGGGACGGCGAAGACCGCAA | + |
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Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRGGWPR*GRRRPQ Trigger: TTGCGGTCTTCGCCGTCCTCACCGTGGCCATCCTCC...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATGACACCAACGAGCCCTaGCCAGCCTTGAAGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHDTNEP*PALKAK Trigger: CTTCGCCTTCAAGGCTGGGCAGGGCTCGTTGGTGTC...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGAGACACCAACGAGCCCTaGCCAGCCTTGAAGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRDTNEP*PALKAK Trigger: CTTCGCCTTCAAGGCTGGGCAGGGCTCGTTGGTGTC...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAAGCCCTGCCCAGCCTTaGAGGCGAAGGCCGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPESPAQP*RRRPML Trigger: GAGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGCT...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACGGAGGATGGCCACGGTaGGGACGGCGAAGACCGCAA | + |
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Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDGGWPR*GRRRPQ Trigger: TTGCGGTCTTCGCCGTCCTCACCGTGGCCATCCTCC...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATCCCAGAATACACTCCTaGGATGGCTGGGTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHPRIHS*DGWVQL Trigger: CAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGG...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGACTTCCAGCCTCACGTTaGCACTGGTCAGCATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRLPASR*HWSASL Trigger: GAGAGATGCTGACCAGTGTCAACGTGAGGCTGGAAG...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTCATGGAGGAGCCACTaGGTTCCATGCCTTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHSWRSH*VPCLAP Trigger: TGGAGCAAGGCATGGAACTCAGTGGCTCCTCCATGA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTCGTTGGTGCTCTTCTaGGCCAGCAAGTGCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHSLVLF*ASKCLS Trigger: TGAGAGGCACTTGCTGGCTCAGAAGAGCACCAACGA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGATCGTTGGTGCTCTTCTaGGCCAGCAAGTGCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRSLVLF*ASKCLS Trigger: TGAGAGGCACTTGCTGGCTCAGAAGAGCACCAACGA...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTGGTCAGCATCTCTCTaGGCTCTGCTGCATGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHWSASL*ALLHAL Trigger: CAGAGCATGCAGCAGAGCGCAGAGAGATGCTGACCA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACGTGCCAGTTGGCAGCTaGTTCCTGCAGCAGGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDVPVGS*FLQQAL Trigger: CAGCGCCTGCTGCAGGAAGCAGCTGCCAACTGGCAC...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGATTGATGACCCAGGAGTaGCAGTTGGCAGCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRLMTQE*QLAAAS Trigger: GGAAGCAGCTGCCAACTGGCACTCCTGGGTCATCAA...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGACACTCCTGGGATGGCTaGGTCCAGCTGCAAATATGG | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRHSWDG*VQLQIW Trigger: CCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTG...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATCACTCCTGGGATGGCTaGGTCCAGCTGCAAATATGG | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHHSWDG*VQLQIW Trigger: CCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTG...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATCAGGATTCTCTCCAGTaGCTCACACCTTCGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHQDSLQ*LTPSDF Trigger: GAAGTCCGAAGGTGTGAGTCACTGGAGAGAATCCTG...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAACTGAGAGACCCTCCATaGCAAGGAGGATGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPELRDPP*QGGWPR Trigger: CCGTGGCCATCCTCCTTGTCATGGAGGGTCTCTCAG...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGACTCTGGTTGGCTTCCTaGAGCTCTCCTTCCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRLWLAS*SSPSNF Trigger: GAAGTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAG...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACCTCTCTGCGCTCTGCTaGATGCTCTGGGCAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDLSALC*MLWAGV Trigger: TACCCCTGCCCAGAGCATGCAGCAGAGCGCAGAGAG...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAACTCTCTGCGCTCTGCTaGATGCTCTGGGCAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPELSALC*MLWAGV Trigger: TACCCCTGCCCAGAGCATGCAGCAGAGCGCAGAGAG...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGCATCTCTCTGCGCTCTaGTGCATGCTCTGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKHLSAL*CMLWAG Trigger: CCCTGCCCAGAGCATGCAGCAGAGCGCAGAGAGATG...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGTGCCAGTTGGCAGCTaGTTCCTGCAGCAGGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTVPVGS*FLQQAL Trigger: CAGCGCCTGCTGCAGGAAGCAGCTGCCAACTGGCAC...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTGCAGCCGGAGGGCGTaGAGAAAGGCTGAGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTCSRRA*RKAERP Trigger: GGGTCTCTCAGCCTTTCTGCACGCCCTCCGGCTGCA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTTCTTCAAAGCCTGGTaGCTCTGGTTGGCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHFFKAW*LWLASC Trigger: GCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTTGAACTCCTCCTCATaGCCGTCCTTCATCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHLNSSS*PSFIPW Trigger: CCATGGGATGAAGGACGGCCATGAGGAGGAGTTCAA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGATTATCACACCAGCCGTaGACCCCAACTTTCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRLSHQP*TPTFQS Trigger: TGACTGGAAAGTTGGGGTTCACGGCTGGTGTGATAA...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGAGTGAAAGACTGCAGCTaGGATTTCTGGTGCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRVKDCS*DFWCLA Trigger: AGCCAAGCACCAGAAATCTCAGCTGCAGTCTTTCAC...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATAGATGTCTCCAAAGTTaGACTCCTCCTCATGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHRCLQS*TPPHGR Trigger: ACGGCCATGAGGAGGAGTTCAACTTTGGAGACATCT...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACGAAGGCCGATGCTCATaGCCATGGTCCAGAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDEGRCS*PWSRAP Trigger: AGGTGCTCTGGACCATGGTCATGAGCATCGGCCTTC...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTCTGAGAGACCCTCCATaGCAAGGAGGATGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTLRDPP*QGGWPR Trigger: CCGTGGCCATCCTCCTTGTCATGGAGGGTCTCTCAG...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGATCGGCAATGATGCACTaGTGGGTGACGTCAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRSAMMH*WVTSML Trigger: CAACATTGACGTCACCCAGCAGTGCATCATTGCCGA...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTCCACATCTCGTTGGTaGTCTTCTGAGCCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHSTSRW*SSEPAS Trigger: ACTTGCTGGCTCAGAAGAGCACCAACGAGATGTGGA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATAATACACTCCTGGGATaGCTGGGTCCAGCTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHNTLLG*LGPAAN Trigger: ATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATT...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAACCCAGAATACACTCCTaGGATGGCTGGGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEPRIHS*DGWVQL Trigger: CAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGG...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGACAGGATTCTCTCCAGTaGCTCACACCTTCGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRQDSLQ*LTPSDF Trigger: GAAGTCCGAAGGTGTGAGTCACTGGAGAGAATCCTG...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGAGCAGGCGCTGTCGGTaGGACTCTGTTTGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKSRRCR*DSVWVM Trigger: CATTACCCAAACAGAGTCTCACCGACAGCGCCTGCT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATAGCATCACCATTCCATaGCCACAGTCTCCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHSITIP*PQSPNI Trigger: GATGTTTGGAGACTGTGGTCATGGAATGGTGATGCT...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGGTCAGCATCTCTCTaGGCTCTGCTGCATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDWSASL*ALLHAL Trigger: CAGAGCATGCAGCAGAGCGCAGAGAGATGCTGACCA...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATATGTCCATACAGGGGTaGGTTGGAAGAGTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHMSIQG*VGRVIV Trigger: TACGATGACTCTTCCAACGCACCCCTGTATGGACAT...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAGTGCCTTCCAGGACGTaGTTAAAGGAGAAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEVPSRT*LKEKGE Trigger: CTCCCCCTTCTCCTTTAAGCACGTCCTGGAAGGCAC...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACGTGCCTTCCAGGACGTaGTTAAAGGAGAAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDVPSRT*LKEKGE Trigger: CTCCCCCTTCTCCTTTAAGCACGTCCTGGAAGGCAC...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAAAAGCCTGGTGGCTCTaGTTGGCTTCCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEKAWWL*LASCSS Trigger: AGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTT...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTCTAGTGTCTGCTACTaGGAACCAGATCTCGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHSSVCY*EPDLGN Trigger: ATTGCCGAGATCTGGTTCCCAGTAGCAGACACTAGA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTTTCTGAACATAGGCTaGACACTCCAAGAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHFLNIG*TLQEEP Trigger: TGGCTCCTCTTGGAGTGTCCAGCCTATGTTCAGAAA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGATTGAACTCCTCCTCATaGCCGTCCTTCATCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRLNSSS*PSFIPW Trigger: CCATGGGATGAAGGACGGCCATGAGGAGGAGTTCAA...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGAGAAGGGGGAGAACTTaGAGCCAGCCCCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKRRGRT*SQPPHR Trigger: TCTATGAGGGGGCTGGCTCCAAGTTCTCCCCCTTCT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTTTAGATCTTTGAACTaGACCAAGCCAAGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LHHTQLHTADSHSEGLQHFRSLN*TKPSSP Trigger: GGGAGAGCTTGGCTTGGTTCAGTTCAAAGATCTAAA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTCTTCCAGCCTCACGTTaGCACTGGTCAGCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTLPASR*HWSASL Trigger: GAGAGATGCTGACCAGTGTCAACGTGAGGCTGGAAG...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTAGCAGGCGCTGTCGGTaGGACTCTGTTTGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTSRRCR*DSVWVM Trigger: CATTACCCAAACAGAGTCTCACCGACAGCGCCTGCT...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTCATGGAGGAGCCACTaGGTTCCATGCCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTSWRSH*VPCLAP Trigger: TGGAGCAAGGCATGGAACTCAGTGGCTCCTCCATGA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAGTGAAAGACTGCAGCTaGGATTTCTGGTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRVKDCS*DFWCLA Trigger: AGCCAAGCACCAGAAATCTCAGCTGCAGTCTTTCAC...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTTGATGACCCAGGAGTaGCAGTTGGCAGCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTLMTQE*QLAAAS Trigger: GGAAGCAGCTGCCAACTGGCACTCCTGGGTCATCAA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTAAAGCCTGGTGGCTCTaGTTGGCTTCCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTKAWWL*LASCSS Trigger: AGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTT...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGACATACAGGGGTGCGTTaGAAGAGTCATCGTAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRHTGVR*KSHRSR Trigger: TCGACTACGATGACTCTTCCAACGCACCCCTGTATG...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGAAATCAAAAGCATCCATaGCACAGACACCAGCGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRNQKHP*HRHQRY Trigger: ATAGCGCTGGTGTCTGTGCCATGGATGCTTTTGATT...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTAGAAGGGGGAGAACTTaGAGCCAGCCCCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTRRGRT*SQPPHR Trigger: TCTATGAGGGGGCTGGCTCCAAGTTCTCCCCCTTCT...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATTATCACACCAGCCGTaGACCCCAACTTTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPELSHQP*TPTFQS Trigger: TGACTGGAAAGTTGGGGTTCACGGCTGGTGTGATAA...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACAGATGTCTCCAAAGTTaGACTCCTCCTCATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDRCLQS*TPPHGR Trigger: ACGGCCATGAGGAGGAGTTCAACTTTGGAGACATCT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGACAGTACTCAATGGTGTaGATGGCTTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRQYSMV*MAWWTK Trigger: CTTTGTCCACCAAGCCATTCACACCATTGAGTACTG...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTCTCTGGTTGGCTTCCTaGAGCTCTCCTTCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTLWLAS*SSPSNF Trigger: GAAGTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAG...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGTCGGCAATGATGCACTaGTGGGTGACGTCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKSAMMH*WVTSML Trigger: CAACATTGACGTCACCCAGCAGTGCATCATTGCCGA...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTCCACATCTCGTTGGTaGTCTTCTGAGCCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDSTSRW*SSEPAS Trigger: ACTTGCTGGCTCAGAAGAGCACCAACGAGATGTGGA...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGCATCCCATGGGCACCTaGAGTCTTCTTAGAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKHPMGT*SLLRRV Trigger: CACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATG...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAACATCCCATGGGCACCTaGAGTCTTCTTAGAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEHPMGT*SLLRRV Trigger: CACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATG...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTTCTTCAAAGCCTGGTaGCTCTGGTTGGCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTFFKAW*LWLASC Trigger: GCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGTGTTCCACATCTCGTTaGTGCTCTTCTGAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKCSTSR*CSSEPA Trigger: TGCTGGCTCAGAAGAGCACCAACGAGATGTGGAACA...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACAATACACTCCTGGGATaGCTGGGTCCAGCTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDNTLLG*LGPAAN Trigger: ATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGCATACAGGGGTGCGTTaGAAGAGTCATCGTAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKHTGVR*KSHRSR Trigger: TCGACTACGATGACTCTTCCAACGCACCCCTGTATG...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATTTATTCGTCCTGTTaGAGGTGGGAGGGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRIYSSC*RWEGLF Trigger: AAACAGACCCTCCCACCTTCAACAGGACGAATAAAT...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGCAGTACTCAATGGTGTaGATGGCTTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKQYSMV*MAWWTK Trigger: CTTTGTCCACCAAGCCATTCACACCATTGAGTACTG...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGATGGCTGGGTCCAGCTaGAAATATGGACTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKMAGSS*KYGLFS Trigger: GGAAAACAGTCCATATTTGCAGCTGGACCCAGCCAT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACATGTCCATACAGGGGTaGGTTGGAAGAGTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDMSIQG*VGRVIV Trigger: TACGATGACTCTTCCAACGCACCCCTGTATGGACAT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGATCCTTCTCAGGCACTTaGATTAAAATCTCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDKSESFFSCRLHQDTDRSFSGT*IKISFC Trigger: GCAAAACGAGATTTTAATCCAAGTGCCTGAGAAGGA...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATCTAGTGTCTGCTACTaGGAACCAGATCTCGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPESSVCY*EPDLGN Trigger: ATTGCCGAGATCTGGTTCCCAGTAGCAGACACTAGA...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTGTTCCACATCTCGTTaGTGCTCTTCTGAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTCSTSR*CSSEPA Trigger: TGCTGGCTCAGAAGAGCACCAACGAGATGTGGAACA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATTTCTGAACATAGGCTaGACACTCCAAGAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEFLNIG*TLQEEP Trigger: TGGCTCCTCTTGGAGTGTCCAGCCTATGTTCAGAAA...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAGTCCAGCTGCAAATATaGACTGTTTTCCACGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRVQLQI*TVFHDV Trigger: CACATCGTGGAAAACAGTCCATATTTGCAGCTGGAC...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| 3UTR CAA 72 bp | GGCAGGAGGAACCTGAGTTCAAAGTCAAGGACATCCTaGGCCGTGTGGTTATTTCCAGAACAGTTAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GRRNLSSKSRTS*AVWLFPEQLKL Trigger: TAGCTTTAACTGTTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTCCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGATCTTTAGGAGGTATTTaGGCTCTGTCAGTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEPEFKVKDILGRVVISRSLGGI*ALSVPE Trigger: TTCTGGAACTGACAGAGCTCAAATACCTCCTAAAGA...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR TCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACCCAACTTTCCAGTCATaGAGGCAGGTATGGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDPTFQS*RQVWFL Trigger: TAAGAACCATACCTGCCTTCATGACTGGAAAGTTGG...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACATTTATTCGTCCTGTTaGAGGTGGGAGGGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDIYSSC*RWEGLF Trigger: AAACAGACCCTCCCACCTTCAACAGGACGAATAAAT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTAGCATCACCATTCCATaGCCACAGTCTCCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTSITIP*PQSPNI Trigger: GATGTTTGGAGACTGTGGTCATGGAATGGTGATGCT...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACAATGTGTCTAGTGTCTaGTACTGGGAACCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDNVSSV*YWEPDL Trigger: GAGATCTGGTTCCCAGTAGCAGACACTAGACACATT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAGTCCAGCTGCAAATATaGACTGTTTTCCACGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEVQLQI*TVFHDV Trigger: CACATCGTGGAAAACAGTCCATATTTGCAGCTGGAC...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACAATCAAAAGCATCCATaGCACAGACACCAGCGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDNQKHP*HRHQRY Trigger: ATAGCGCTGGTGTCTGTGCCATGGATGCTTTTGATT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATCTTTAGGAGGTATTTaGGCTCTGTCAGTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPESLGGI*ALSVPE Trigger: TTCTGGAACTGACAGAGCTCAAATACCTCCTAAAGA...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTCCAACTTTCCAGTCATaGAGGCAGGTATGGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTPTFQS*RQVWFL Trigger: TAAGAACCATACCTGCCTTCATGACTGGAAAGTTGG...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTAATGTGTCTAGTGTCTaGTACTGGGAACCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTNVSSV*YWEPDL Trigger: GAGATCTGGTTCCCAGTAGCAGACACTAGACACATT...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAACCTGGAGAAACACTTaGGATAAACACATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPETWRNT*DKHISS Trigger: TGAGGAGATGTGTTTATCCCAAGTGTTTCTCCAGGT...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR GCA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGATCTCGGGAATGAATTaGAGAATGATGTTGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKISGMN*RMMLRV Trigger: AACCCTCAACATCATTCTGCAATTCATTCCCGAGAT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR GCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTATCTCGGGAATGAATTaGAGAATGATGTTGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTISGMN*RMMLRV Trigger: AACCCTCAACATCATTCTGCAATTCATTCCCGAGAT...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | TTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTTCCTTCTCAGGCACTTaGATTAAAATCTCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPYTASHCRQPFRRTSFSGT*IKISFC Trigger: GCAAAACGAGATTTTAATCCAAGTGCCTGAGAAGGA...AGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACGCATCAACAATGTTCTaGAAGCCAGCTGTAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDASTMF*KPAVNL Trigger: TAAATTTACAGCTGGCTTCCAGAACATTGTTGATGC...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CCA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAGCATCAACAATGTTCTaGAAGCCAGCTGTAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEASTMF*KPAVNL Trigger: TAAATTTACAGCTGGCTTCCAGAACATTGTTGATGC...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS TCA 90 bp | CACCAACGAGCCCTGCCCAGCCTTGAAGGCGAAGGCCGATGCTCATaGCCATGGTCCAGAGCACCTCGGACAGCTCAGCGTGAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HQRALPSLEGEGRCS*PWSRAPRTAQREPS Trigger: GCTTGGCTCACGCTGAGCTGTCCGAGGTGCTCTGGACCATGGTCATGAGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGCTCGTTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 90 bp | GTCTTCCAGCCTCACGTTGACACTGGTCAGCATCTCTCTGCGCTCTaGTGCATGCTCTGGGCAGGGGTAGATGGTAGCACGAAACCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFQPHVDTGQHLSAL*CMLWAGVDGSTKPV Trigger: GACGGGTTTCGTGCTACCATCTACCCCTGCCCAGAGCATGCAGCAGAGCGCAGAGAGATGCTGACCAGTGTCAACGTGAGGCTGGAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | TGGCCGTCCTTCATCCCATGGGCACCTGCAGTCTTCTTAGAAGAGTaGCCCGAGTGGTCACCCTCCACAGCATCCTCGTGGATCGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WPSFIPWAPAVFLEE*PEWSPSTASSWIVK Trigger: TTTCACGATCCACGAGGATGCTGTGGAGGGTGACCACTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAAGGACGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGAGAGCCCTGCCCAGCCTaGAAGGCGAAGGCCGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDKSESFFSCRLHQDTDREPCPA*KAKADA Trigger: AGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGCTC...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 90 bp | AAAGTTGAACTCCTCCTCATGGCCGTCCTTCATCCCATGGGCACCTaGAGTCTTCTTAGAAGAGTGGCCCGAGTGGTCACCCTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVELLLMAVLHPMGT*SLLRRVARVVTLHS Trigger: GCTGTGGAGGGTGACCACTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAAGGACGGCCATGAGGAGGAGTTCAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | TTCATCCCATGGGCACCTGCAGTCTTCTTAGAAGAGTGGCCCGAGTaGTCACCCTCCACAGCATCCTCGTGGATCGTGAAAGACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FIPWAPAVFLEEWPE*SPSTASSWIVKDCS Trigger: GCTGCAGTCTTTCACGATCCACGAGGATGCTGTGGAGGGTGACCACTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGAGCCTGGTGGCTCTGGTaGGCTTCCTGCAGCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RDKSESFFSCRLHQDTDRAWWLW*ASCSSP Trigger: AGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGC...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGAACCCAGGAGTGCCAGTaGGCAGCTGCTTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDKSESFFSCRLHQDTDRTQECQ*AAASCS Trigger: GCTGCAGGAAGCAGCTGCCAACTGGCACTCCTGGGT...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATACCCAGGAGTGCCAGTaGGCAGCTGCTTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHHTQLHTADSHSEGLQHTQECQ*AAASCS Trigger: GCTGCAGGAAGCAGCTGCCAACTGGCACTCCTGGGT...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | CACGTTGACACTGGTCAGCATCTCTCTGCGCTCTGCTGCATGCTCTaGGCAGGGGTAGATGGTAGCACGAAACCCGTCACAGATCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HVDTGQHLSALCCML*AGVDGSTKPVTDLL Trigger: AAGAAGATCTGTGACGGGTTTCGTGCTACCATCTACCCCTGCCCAGAGCATGCAGCAGAGCGCAGAGAGATGCTGACCAGTGTCAACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | ATGTCTCCAAAGTTGAACTCCTCCTCATGGCCGTCCTTCATCCCATaGGCACCTGCAGTCTTCTTAGAAGAGTGGCCCGAGTGGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: MSPKLNSSSWPSFIP*APAVFLEEWPEWSP Trigger: GGGTGACCACTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAAGGACGGCCATGAGGAGGAGTTCAACTTTGGAGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACGAGCCCTGCCCAGCCTaGAAGGCGAAGGCCGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDEPCPA*KAKADA Trigger: AGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGCTC...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 90 bp | TCCAGAAAGCTCTTCTTCAAAGCCTGGTGGCTCTGGTTGGCTTCCTaGAGCTCTCCTTCCAACTTCTCTAGAGTCGTCTCCAGGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SRKLFFKAWWLWLAS*SSPSNFSRVVSRVI Trigger: GATCACCCTGGAGACGACTCTAGAGAAGTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAAGAGCTTTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 90 bp | CTTCATCTTCTGTACTTTGATGACCCAGGAGTGCCAGTTGGCAGCTaGTTCCTGCAGCAGGCGCTGTCGGTGAGACTCTGTTTGGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LHLLYFDDPGVPVGS*FLQQALSVRLCLGN Trigger: ATTACCCAAACAGAGTCTCACCGACAGCGCCTGCTGCAGGAAGCAGCTGCCAACTGGCACTCCTGGGTCATCAAAGTACAGAAGATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 90 bp | GAGTTCCATGCCTTGCTCCAGGGCCTTCTTAATGTGTCTAGTGTCTaGTACTGGGAACCAGATCTCGGCAATGATGCACTGCTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EFHALLQGLLNVSSV*YWEPDLGNDALLGD Trigger: GTCACCCAGCAGTGCATCATTGCCGAGATCTGGTTCCCAGTAGCAGACACTAGACACATTAAGAAGGCCCTGGAGCAAGGCATGGAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAGCCTGGTGGCTCTGGTaGGCTTCCTGCAGCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RNLSSKSRTSLAVWLFPEAWWLW*ASCSSP Trigger: AGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGC...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | CTGTCAGTTCCAGAAAGCTCTTCTTCAAAGCCTGGTGGCTCTGGTTaGCTTCCTGCAGCTCTCCTTCCAACTTCTCTAGAGTCGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSVPESSSSKPGGSG*LPAALLPTSLESSP Trigger: TGGAGACGACTCTAGAGAAGTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAAGAGCTTTCTGGAACTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAGAGTGAGAGCTTCTTCAGCTGTCGCCTGCACCAGGATACAGACAGATCTTCCAGCCTCACGTaGACACTGGTCAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDKSESFFSCRLHQDTDRSSSLT*TLVSIS Trigger: AGAGATGCTGACCAGTGTCAACGTGAGGCTGGAAGA...TCTGTCTGTATCCTGGTGCAGGCGACAGCTGAAGAAGCTCTCACTCTTGTCTCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS GCA 90 bp | TCTGTCATGATGGGAATCATGGAGGAGCCACTGAGTTCCATGCCTTaGTCCAGGGCCTTCTTAATGTGTCTAGTGTCTGCTACTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVMMGIMEEPLSSMP*SRAFLMCLVSATGN Trigger: GTTCCCAGTAGCAGACACTAGACACATTAAGAAGGCCCTGGAGCAAGGCATGGAACTCAGTGGCTCCTCCATGATTCCCATCATGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS CCA 90 bp | ATGGCTTGGTGGACAAAGATGTCTCCAAAGTTGAACTCCTCCTCATaGCCGTCCTTCATCCCATGGGCACCTGCAGTCTTCTTAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MAWWTKMSPKLNSSS*PSFIPWAPAVFLEE Trigger: CTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAAGGACGGCCATGAGGAGGAGTTCAACTTTGGAGACATCTTTGTCCACCAAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS CCA 90 bp | ATTCCCAGAATACACTCCTGGGATGGCTGGGTCCAGCTGCAAATATaGACTGTTTTCCACGATGTGAGTATTCCACGTGCCGTTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IPRIHSWDGWVQLQI*TVFHDVSIPRAVSE Trigger: TTCAGAAACGGCACGTGGAATACTCACATCGTGGAAAACAGTCCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS CCA 90 bp | GATCAATTCCAAATGGGTAGGGATTCCCAGAATACACTCCTGGGATaGCTGGGTCCAGCTGCAAATATGGACTGTTTTCCACGATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DQFQMGRDSQNTLLG*LGPAANMDCFPRCE Trigger: CTCACATCGTGGAAAACAGTCCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGGAATCCCTACCCATTTGGAATTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS CCA 90 bp | ATGCCGATAAAGTGGATGAGGATGCTAGGAGCCTTCCGGGATGTGTaGGCATCATATCGGCACCACTTGAAAATGATCATGAAAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MPIKWMRMLGAFRDV*ASYRHHLKMIMKTR Trigger: CCTGGTTTTCATGATCATTTTCAAGTGGTGCCGATATGATGCCCACACATCCCGGAAGGCTCCTAGCATCCTCATCCACTTTATCGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGTCTTCCAGCCTCACGTaGACACTGGTCAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKSSSLT*TLVSIS Trigger: AGAGATGCTGACCAGTGTCAACGTGAGGCTGGAAGA...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
||
| CDS-3UTR CAA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATCATCTCGGGAATGAATaGCAGAATGATGTTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHHTQLHTADSHSEGLQHHLGNE*QNDVEG Trigger: ACCCTCAACATCATTCTGCAATTCATTCCCGAGATG...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS TCA 90 bp | TGGTCACCCTCCACAGCATCCTCGTGGATCGTGAAAGACTGCAGCTaGGATTTCTGGTGCTTGGCTCTAAGAACAAATGGCTTAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: WSPSTASSWIVKDCS*DFWCLALRTNGLIK Trigger: TTTGATTAAGCCATTTGTTCTTAGAGCCAAGCACCAGAAATCTCAGCTGCAGTCTTTCACGATCCACGAGGATGCTGTGGAGGGTGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | AATCGGATCAATTCCAAATGGGTAGGGATTCCCAGAATACACTCCTaGGATGGCTGGGTCCAGCTGCAAATATGGACTGTTTTCCACGAT | + |
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Preference number: 5 (lower is better) Translates to: NRINSKWVGIPRIHS*DGWVQLQIWTVFHD Trigger: ATCGTGGAAAACAGTCCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGGAATCCCTACCCATTTGGAATTGATCCGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | CTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACTGCAGCATTTCTTTAGGAGGTATTaGAGCTCTGTCAGTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LHHTQLHTADSHSEGLQHFFRRY*SSVSSR Trigger: TCTGGAACTGACAGAGCTCAAATACCTCCTAAAGAA...ATGCTGCAGTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGAAGATGTCTCCAAAGTaGAACTCCTCCTCATGGCCG | + |
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Preference number: 5 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKKMSPK*NSSSWP Trigger: CGGCCATGAGGAGGAGTTCAACTTTGGAGACATCTT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACAAGATGTCTCCAAAGTaGAACTCCTCCTCATGGCCG | + |
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Preference number: 5 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDKMSPK*NSSSWP Trigger: CGGCCATGAGGAGGAGTTCAACTTTGGAGACATCTT...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGCCGTCACAGATCTTCTaGATTTTCAGCCTGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKPSQIF*IFSLSC Trigger: ACAGCTCAGGCTGAAAATCAAGAAGATCTGTGACGG...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGAATGGTGTGAATGGCTaGGTGGACAAAGATGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKNGVNG*VDKDVS Trigger: GGAGACATCTTTGTCCACCAAGCCATTCACACCATT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAAAATGGTGTGAATGGCTaGGTGGACAAAGATGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RNLSSKSRTSLAVWLFPENGVNG*VDKDVS Trigger: GGAGACATCTTTGTCCACCAAGCCATTCACACCATT...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 90 bp | GATGACAAAGAAAGTCTGGACTTCTTGCTGATGTCCATACAGGGGTaGGTTGGAAGAGTCATCGTAGTCGAACAGAAACATGCCGATAAA | + |
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Preference number: 5 (lower is better) Translates to: DDKESLDFLLMSIQG*VGRVIVVEQKHADK Trigger: TTTATCGGCATGTTTCTGTTCGACTACGATGACTCTTCCAACGCACCCCTGTATGGACATCAGCAAGAAGTCCAGACTTTCTTTGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 90 bp | GAAAGACTGCAGCTGAGATTTCTGGTGCTTGGCTCTAAGAACAAATaGCTTAATCAAAAGCATCCATGGCACAGACACCAGCGCTATGAT | + |
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Preference number: 5 (lower is better) Translates to: ERLQLRFLVLGSKNK*LNQKHPWHRHQRYD Trigger: ATCATAGCGCTGGTGTCTGTGCCATGGATGCTTTTGATTAAGCCATTTGTTCTTAGAGCCAAGCACCAGAAATCTCAGCTGCAGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGATTCTTTAGGAGGTATTaGAGCTCTGTCAGTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: EEPEFKVKDILGRVVISRFFRRY*SSVSSR Trigger: TCTGGAACTGACAGAGCTCAAATACCTCCTAAAGAA...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | CCTGTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGAATTTATTCGTCCTGTaGAAGGTGGGAGGGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVKYCTIHSFTLQTAIQKNLFVL*KVGGSV Trigger: AACAGACCCTCCCACCTTCAACAGGACGAATAAATT...CTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | GTTAAATACTGCACCATACACAGCTTCACACTGCAGACAGCCATTCAGAAGGACCATCTCGGGAATGAATaGCAGAATGATGTTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VKYCTIHSFTLQTAIQKDHLGNE*QNDVEG Trigger: ACCCTCAACATCATTCTGCAATTCATTCCCGAGATG...GTCCTTCTGAATGGCTGTCTGCAGTGTGAAGCTGTGTATGGTGCAGTATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | GAGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGATCATATCGGCACCACTaGAAAATGATCATGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: EEPEFKVKDILGRVVISRSYRHH*KMIMKT Trigger: GGTTTTCATGATCATTTTCAAGTGGTGCCGATATGA...TCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS-3UTR CAA 90 bp | AGGAACCTGAGTTCAAAGTCAAGGACATCCTTGGCCGTGTGGTTATTTCCAGAATCATATCGGCACCACTaGAAAATGATCATGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: RNLSSKSRTSLAVWLFPESYRHH*KMIMKT Trigger: GGTTTTCATGATCATTTTCAAGTGGTGCCGATATGA...TTCTGGAAATAACCACACGGCCAAGGATGTCCTTGACTTTGAACTCAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS TCA 72 bp | GCCCTGCCCAGCCTTGAAGGCGAAGGCCGATGCTCATaGCCATGGTCCAGAGCACCTCGGACAGCTCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: ALPSLEGEGRCS*PWSRAPRTAQR Trigger: ACGCTGAGCTGTCCGAGGTGCTCTGGACCATGGTCATGAGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 72 bp | CCTCACGTTGACACTGGTCAGCATCTCTCTGCGCTCTaGTGCATGCTCTGGGCAGGGGTAGATGGTAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: PHVDTGQHLSAL*CMLWAGVDGST Trigger: CGTGCTACCATCTACCCCTGCCCAGAGCATGCAGCAGAGCGCAGAGAGATGCTGACCAGTGTCAACGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | TTCATCCCATGGGCACCTGCAGTCTTCTTAGAAGAGTaGCCCGAGTGGTCACCCTCCACAGCATCCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FIPWAPAVFLEE*PEWSPSTASSW Trigger: CCACGAGGATGCTGTGGAGGGTGACCACTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS TCA 72 bp | CCGAGTGGTCACCCTCCACAGCATCCTCGTGGATCGTaGAAGACTGCAGCTGAGATTTCTGGTGCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSGHPPQHPRGS*KTAAEISGAWL Trigger: GAGCCAAGCACCAGAAATCTCAGCTGCAGTCTTTCACGATCCACGAGGATGCTGTGGAGGGTGACCACTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 72 bp | TTGTTCTGGAATTCCACCCAATGCAGCCGGAGGGCGTaGAGAAAGGCTGAGAGACCCTCCATGACAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LFWNSTQCSRRA*RKAERPSMTRR Trigger: CCTCCTTGTCATGGAGGGTCTCTCAGCCTTTCTGCACGCCCTCCGGCTGCATTGGGTGGAATTCCAGAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | TGGGCACCTGCAGTCTTCTTAGAAGAGTGGCCCGAGTaGTCACCCTCCACAGCATCCTCGTGGATCGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: WAPAVFLEEWPE*SPSTASSWIVK Trigger: TTTCACGATCCACGAGGATGCTGTGGAGGGTGACCACTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS TCA 72 bp | AAAATGATGAAGACACCAACGAGCCCTGCCCAGCCTTaGAGGCGAAGGCCGATGCTCATGACCATGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KMMKTPTSPAQP*RRRPMLMTMVQ Trigger: CTGGACCATGGTCATGAGCATCGGCCTTCGCCTTCAAGGCTGGGCAGGGCTCGTTGGTGTCTTCATCATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | AAGTTGAACTCCTCCTCATGGCCGTCCTTCATCCCATaGGCACCTGCAGTCTTCTTAGAAGAGTGGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: KLNSSSWPSFIP*APAVFLEEWPE Trigger: CTCGGGCCACTCTTCTAAGAAGACTGCAGGTGCCCATGGGATGAAGGACGGCCATGAGGAGGAGTTCAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 72 bp | GCCTTGCTCCAGGGCCTTCTTAATGTGTCTAGTGTCTaGTACTGGGAACCAGATCTCGGCAATGATGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ALLQGLLNVSSV*YWEPDLGNDAL Trigger: CAGTGCATCATTGCCGAGATCTGGTTCCCAGTAGCAGACACTAGACACATTAAGAAGGCCCTGGAGCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | CCAGAAAGCTCTTCTTCAAAGCCTGGTGGCTCTGGTTaGCTTCCTGCAGCTCTCCTTCCAACTTCTCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PESSSSKPGGSG*LPAALLPTSLE Trigger: CTCTAGAGAAGTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAAGAGCTTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | TCTGTCAGTTCCAGAAAGCTCTTCTTCAAAGCCTGGTaGCTCTGGTTGGCTTCCTGCAGCTCTCCTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SVSSRKLFFKAW*LWLASCSSPSN Trigger: GTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAAGAGCTTTCTGGAACTGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CAA 72 bp | GATGGGAATCATGGAGGAGCCACTGAGTTCCATGCCTaGCTCCAGGGCCTTCTTAATGTGTCTAGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DGNHGGATEFHA*LQGLLNVSSVC Trigger: GCAGACACTAGACACATTAAGAAGGCCCTGGAGCAAGGCATGGAACTCAGTGGCTCCTCCATGATTCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 72 bp | ATGGGAATCATGGAGGAGCCACTGAGTTCCATGCCTTaGTCCAGGGCCTTCTTAATGTGTCTAGTGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: MGIMEEPLSSMP*SRAFLMCLVSA Trigger: AGCAGACACTAGACACATTAAGAAGGCCCTGGAGCAAGGCATGGAACTCAGTGGCTCCTCCATGATTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | AGTTCCAGAAAGCTCTTCTTCAAAGCCTGGTGGCTCTaGTTGGCTTCCTGCAGCTCTCCTTCCAACTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRKLFFKAWWL*LASCSSPSNFS Trigger: AGAGAAGTTGGAAGGAGAGCTGCAGGAAGCCAACCAGAGCCACCAGGCTTTGAAGAAGAGCTTTCTGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | ATACACTCCTGGGATGGCTGGGTCCAGCTGCAAATATaGACTGTTTTCCACGATGTGAGTATTCCACGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IHSWDGWVQLQI*TVFHDVSIPRA Trigger: GGCACGTGGAATACTCACATCGTGGAAAACAGTCCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CAA 90 bp | TTCTGTCATGATGGGAATCATGGAGGAGCCACTGAGTTCCATGCCTaGCTCCAGGGCCTTCTTAATGTGTCTAGTGTCTGCTACTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FCHDGNHGGATEFHA*LQGLLNVSSVCYWE Trigger: TTCCCAGTAGCAGACACTAGACACATTAAGAAGGCCCTGGAGCAAGGCATGGAACTCAGTGGCTCCTCCATGATTCCCATCATGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS TCA 72 bp | GGGTCCAGCTGCAAATATGGACTGTTTTCCACGATGTaGGTATTCCACGTGCCGTTTCTGAACATAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSCKYGLFSTM*VFHVPFLNIGW Trigger: CCAGCCTATGTTCAGAAACGGCACGTGGAATACTCACATCGTGGAAAACAGTCCATATTTGCAGCTGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | CAAATGGGTAGGGATTCCCAGAATACACTCCTGGGATaGCTGGGTCCAGCTGCAAATATGGACTGTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QMGRDSQNTLLG*LGPAANMDCFP Trigger: TGGAAAACAGTCCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGGAATCCCTACCCATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | AAGTGGATGAGGATGCTAGGAGCCTTCCGGGATGTGTaGGCATCATATCGGCACCACTTGAAAATGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: KWMRMLGAFRDV*ASYRHHLKMIM Trigger: CATGATCATTTTCAAGTGGTGCCGATATGATGCCCACACATCCCGGAAGGCTCCTAGCATCCTCATCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | TCTGGACTTCTTGCTGATGTCCATACAGGGGTGCGTTaGAAGAGTCATCGTAGTCGAACAGAAACATGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SGLLADVHTGVR*KSHRSRTETCR Trigger: TCGGCATGTTTCTGTTCGACTACGATGACTCTTCCAACGCACCCCTGTATGGACATCAGCAAGAAGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | AATTCCAAATGGGTAGGGATTCCCAGAATACACTCCTaGGATGGCTGGGTCCAGCTGCAAATATGGACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NSKWVGIPRIHS*DGWVQLQIWTV Trigger: AACAGTCCATATTTGCAGCTGGACCCAGCCATCCCAGGAGTGTATTCTGGGAATCCCTACCCATTTGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CAA 90 bp | ATGCTAGGAGCCTTCCGGGATGTGTGGGCATCATATCGGCACCACTaGAAAATGATCATGAAAACCAGGTATCCAAACAGACTCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: MLGAFRDVWASYRHH*KMIMKTRYPNRLSI Trigger: TATGCTGAGTCTGTTTGGATACCTGGTTTTCATGATCATTTTCAAGTGGTGCCGATATGATGCCCACACATCCCGGAAGGCTCCTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS GCA 72 bp | GAAAGTCTGGACTTCTTGCTGATGTCCATACAGGGGTaGGTTGGAAGAGTCATCGTAGTCGAACAGAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: ESLDFLLMSIQG*VGRVIVVEQKH Trigger: ATGTTTCTGTTCGACTACGATGACTCTTCCAACGCACCCCTGTATGGACATCAGCAAGAAGTCCAGACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CAA 72 bp | GCCTTCCGGGATGTGTGGGCATCATATCGGCACCACTaGAAAATGATCATGAAAACCAGGTATCCAAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: AFRDVWASYRHH*KMIMKTRYPNR Trigger: TCTGTTTGGATACCTGGTTTTCATGATCATTTTCAAGTGGTGCCGATATGATGCCCACACATCCCGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CAA 90 bp | GCATCAACAATGTTCTGGAAGCCAGCTGTAAATTTATTCGTCCTGTaGAAGGTGGGAGGGTCTGTTTTAGTTTCCACTTCTGTCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASTMFWKPAVNLFVL*KVGGSVLVSTSVMM Trigger: CATCATGACAGAAGTGGAAACTAAAACAGACCCTCCCACCTTCAACAGGACGAATAAATTTACAGCTGGCTTCCAGAACATTGTTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CCA 72 bp | GGCTCTAAGAACAAATGGCTTAATCAAAAGCATCCATaGCACAGACACCAGCGCTATGATGACAAAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSKNKWLNQKHP*HRHQRYDDKES Trigger: ACTTTCTTTGTCATCATAGCGCTGGTGTCTGTGCCATGGATGCTTTTGATTAAGCCATTTGTTCTTAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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| CDS CAA 72 bp | ATGTTCTGGAAGCCAGCTGTAAATTTATTCGTCCTGTaGAAGGTGGGAGGGTCTGTTTTAGTTTCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MFWKPAVNLFVL*KVGGSVLVSTS Trigger: AGAAGTGGAAACTAAAACAGACCCTCCCACCTTCAACAGGACGAATAAATTTACAGCTGGCTTCCAGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040259.8 ENSMUST00000114908.5 |
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