Pregenerated sensors for ATP6V0A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038023Ensembl transcript IDs: ENSMUST00000037865.13, ENSMUST00000197161.2, ENSMUST00000198382.5
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGGCAGGCTCGGCATCCTAGCTGGAGCCTCGCTGCCGTCAGTGTaGACCCCACAGGGGCTGGAGCGATCTGATGTTACTCTCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: AGRLGILAGASLPSV*TPQGLERSDVTLQL Trigger: CAGCTGGAGAGTAACATCAGATCGCTCCAGCCCCTGTGGGGTCCACACTGACGGCAGCGAGGCTCCAGCTAGGATGCCGAGCCTGCCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CCA 90 bp | AGCTCCGCTCTCTCTCGAGCCTTCCTCCAGTGCTCTGCGCAAGCCTaGCAGGTCCACCTCGGGGCACCAGACCTCAGCTATGAGGCACTT | + |
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Preference number: 1 (lower is better) Translates to: SSALSRAFLQCSAQA*QVHLGAPDLSYEAL Trigger: AAGTGCCTCATAGCTGAGGTCTGGTGCCCCGAGGTGGACCTGCCAGGCTTGCGCAGAGCACTGGAGGAAGGCTCGAGAGAGAGCGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | AGCCTCGCTGCCGTCAGTGTGGACCCCACAGGGGCTGGAGCGATCTaGTGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SLAAVSVDPTGAGAI*CYSPAEAQAVHASQ Trigger: CTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACATCAGATCGCTCCAGCCCCTGTGGGGTCCACACTGACGGCAGCGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 90 bp | CCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTaGATGCCTCTACTGGCCACATCACATCGGGCCTTCCCACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PRSYGGGSVQELKAL*MPLLATSHRAFPPA Trigger: TGCTGGTGGGAAGGCCCGATGTGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 90 bp | TCTTCCTCACCTGGACCACACGGCTGCACACGGACTCGGCAGCTTTaGAGAGCACTTGCCGCAGATAGTCCTCCGTTTTGTGCAGCACCG | + |
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Preference number: 1 (lower is better) Translates to: SSSPGPHGCTRTRQL*RALAADSPPFCAAP Trigger: CGGTGCTGCACAAAACGGAGGACTATCTGCGGCAAGTGCTCTGCAAAGCTGCCGAGTCCGTGTGCAGCCGTGTGGTCCAGGTGAGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR GCA 90 bp | GGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATaGCTCTACTGGCCACATCACATCGGGCCTTCCCACCAGCATAAG | + |
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Preference number: 1 (lower is better) Translates to: GPMEEGACRSSKPFA*LYWPHHIGPSHQHK Trigger: CTTATGCTGGTGGGAAGGCCCGATGTGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR TCA 90 bp | TACCGGCCGTCAAAGAACATCCTAAGGATCTGGGAGAAGACACCGTaGGAGCTGACTCACTCACTCACTGGACAGTGGGCTCCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: YRPSKNILRIWEKTP*ELTHSLTGQWAPGR Trigger: CCTCCCAGGAGCCCACTGTCCAGTGAGTGAGTGAGTCAGCTCTCACGGTGTCTTCTCCCAGATCCTTAGGATGTTCTTTGACGGCCGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR GCA 90 bp | TATGACTTCACCCGTTTCAGGGTCCTCCAGGCACTCGTCCAGCTCTaGATAGGTCACAATGGTGTACCCTTTGCAGGCCCGCCACAGCAT | + |
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Preference number: 1 (lower is better) Translates to: YDFTRFRVLQALVQL*IGHNGVPFAGPPQH Trigger: ATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTGACCTATGCAGAGCTGGACGAGTGCCTGGAGGACCCTGAAACGGGTGAAGTCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | GACGGTCTGTGCCTTACTACACTCCTGCAGACGGAGCAGTGGGCCTaGATGTCATTACACCCATGGCCAGCATTGCATACCTGTAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: DGLCLTTLLQTEQWA*MSLHPWPALHTCSA Trigger: GGCACTACAGGTATGCAATGCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTAGTAAGGCACAGACCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 90 bp | CCAGGCACTCGTCCAGCTCTGCATAGGTCACAATGGTGTACCCTTTaGAGGCCCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: PGTRPALHRSQWCTL*RPATASFQMLQLCL Trigger: AAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTGACCTATGCAGAGCTGGACGAGTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CCA 90 bp | TTTCAGGGTCCTCCAGGCACTCGTCCAGCTCTGCATAGGTCACAATaGTGTACCCTTTGCAGGCCCGCCACAGCATCCTTTCAAATGCTT | + |
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Preference number: 1 (lower is better) Translates to: FQGPPGTRPALHRSQ*CTLCRPATASFQML Trigger: AAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTGACCTATGCAGAGCTGGACGAGTGCCTGGAGGACCCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR GCA 90 bp | CTGCTGTGCCTGATGGTGCTGTCATTCCAAAGTACCATCTTCCTCTaGTCCTCTGGAGAGTGGCTGGAGCTGTACATGGCAGATACGTTC | + |
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Preference number: 1 (lower is better) Translates to: LLCLMVLSFQSTIFL*SSGEWLELYMADTF Trigger: GAACGTATCTGCCATGTACAGCTCCAGCCACTCTCCAGAGGAGCAGAGGAAGATGGTACTTTGGAATGACAGCACCATCAGGCACAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CCA 90 bp | GTACCATCTTCCTCTGCTCCTCTGGAGAGTGGCTGGAGCTGTACATaGCAGATACGTTCCACCCAGAACCAAAGAGGTTCACAGACTTGG | + |
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Preference number: 1 (lower is better) Translates to: VPSSSAPLESGWSCT*QIRSTQNQRGSQTW Trigger: CCAAGTCTGTGAACCTCTTTGGTTCTGGGTGGAACGTATCTGCCATGTACAGCTCCAGCCACTCTCCAGAGGAGCAGAGGAAGATGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | CAATCTGCTCTCCCCAAAAGGAAATCAGGAACACGTACCACTTTATaGCTTCACCCGTTTCAGGGTCCTCCAGGCACTCGTCCAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QSALPKRKSGTRTTL*LHPFQGPPGTRPAL Trigger: CAGAGCTGGACGAGTGCCTGGAGGACCCTGAAACGGGTGAAGTCATAAAGTGGTACGTGTTCCTGATTTCCTTTTGGGGAGAGCAGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | GGCGGGTGGGCGAGCATTACCTCCTGTGACTGGCTTAGTCTGGGGTaGTTCTCATTTAACACCAGTAAGAGGGCAAACAGGAACATGACA | + |
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Preference number: 1 (lower is better) Translates to: GGWASITSCDWLSLG*FSFNTSKRANRNMT Trigger: TGTCATGTTCCTGTTTGCCCTCTTACTGGTGTTAAATGAGAATCACCCCAGACTAAGCCAGTCACAGGAGGTAATGCTCGCCCACCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | AAACTCCAGGGATATTCGGGTCCAGCTGCAAAGTCCTGCTGTGCCTaGTGGTGCTGTCATTCCAAAGTACCATCTTCCTCTGCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: KLQGYSGPAAKSCCA*WCCHSKVPSSSAPL Trigger: CAGAGGAGCAGAGGAAGATGGTACTTTGGAATGACAGCACCATCAGGCACAGCAGGACTTTGCAGCTGGACCCGAATATCCCTGGAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | GCCTTGACGAATCATCCTGTGGAGTTGCACGGTCTGAGGATTTCTTaGTGTATTAGAGCAGTGGTCTGCTGGTGGGCAAACTGCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: ALTNHPVELHGLRIS*CIRAVVCWWANCLF Trigger: GAAGAGGCAGTTTGCCCACCAGCAGACCACTGCTCTAATACATCAAGAAATCCTCAGACCGTGCAACTCCACAGGATGATTCGTCAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR TCA 90 bp | CTGGACAAAGGATTGCTGAAGCTGCCTTTCCCATGGCCAGCTGAGTaGGGGGAAAGTTGTAGACTTTCAAGACCAAACCAGATACCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LDKGLLKLPFPWPAE*GESCRLSRPNQIPS Trigger: GCTGGGTATCTGGTTTGGTCTTGAAAGTCTACAACTTTCCCCTCACTCAGCTGGCCATGGGAAAGGCAGCTTCAGCAATCCTTTGTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | CTGAATCAGGCCAGAAACGAATCTGTGTGCTGGACAAAGGATTGCTaGAGCTGCCTTTCCCATGGCCAGCTGAGTGAGGGGAAAGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: LNQARNESVCWTKDC*SCLSHGQLSEGKVV Trigger: TACAACTTTCCCCTCACTCAGCTGGCCATGGGAAAGGCAGCTTCAGCAATCCTTTGTCCAGCACACAGATTCGTTTCTGGCCTGATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | CAGGCCCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTTGCTaGATCAGGCCAGAAACGAATCTGTGTGCTGGACAAAGGATTGCT | + |
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Preference number: 1 (lower is better) Translates to: QARHSILSNASTLPC*IRPETNLCAGQRIA Trigger: AGCAATCCTTTGTCCAGCACACAGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR GCA 90 bp | CACAATGGTGTACCCTTTGCAGGCCCGCCACAGCATCCTTTCAAATaGTTCAACTCTGCCTTGCTGAATCAGGCCAGAAACGAATCTGTG | + |
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Preference number: 1 (lower is better) Translates to: HNGVPFAGPPQHPFK*FNSALLNQARNESV Trigger: CACAGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CCA 90 bp | CTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAATTCTaGCTGCCAGAGGCTTGGCTTTTAAGGAAAGGGACCCACACTCTA | + |
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Preference number: 1 (lower is better) Translates to: LSACSSYRTQEAVKF*LPEAWLLRKGTHTL Trigger: TAGAGTGTGGGTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCAGAATTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CCA 90 bp | AGTATTGAGCCCCTCCTGAATCTCCCTGCGCTCCTCAGCCGTGTTTaGATACGGGTAGATGTGGCAGTGGTAACAGTCACATATCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: SIEPLLNLPALLSRV*IRVDVAVVTVTYLL Trigger: AAGAAGATATGTGACTGTTACCACTGCCACATCTACCCGTATCCAAACACGGCTGAGGAGCGCAGGGAGATTCAGGAGGGGCTCAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CCA 90 bp | TCTTACAGGACCCAAGAAGCTGTGAAATTCTGGCTGCCAGAGGCTTaGCTTTTAAGGAAAGGGACCCACACTCTACCACATGGTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SYRTQEAVKFWLPEA*LLRKGTHTLPHGSG Trigger: TCCAGAACCATGTGGTAGAGTGTGGGTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCAGAATTTCACAGCTTCTTGGGTCCTGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR TCA 90 bp | CAAACTTGGTGCCTGCACCAACGTAGAATTTGTTCTGAAATTCAGTaGAGCCTTATGGCGTGGAGGAATGCAGAAAGACCCTCCATGACC | + |
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Preference number: 1 (lower is better) Translates to: QTWCLHQRRICSEIQ*SLMAWRNAERPSMT Trigger: GGTCATGGAGGGTCTTTCTGCATTCCTCCACGCCATAAGGCTTCACTGAATTTCAGAACAAATTCTACGTTGGTGCAGGCACCAAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
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| 3UTR TCA 90 bp | AATCTTCACCATGAGGAAGAGGTGTATCTTACAGAACCATTTGGCTaGATCGTAAGGCAATCAACGAGGGTGGAACTTTCCCCTGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: NLHHEEEVYLTEPFG*IVRQSTRVELSPGK Trigger: CTTACCAGGGGAAAGTTCCACCCTCGTTGATTGCCTTACGATTCAGCCAAATGGTTCTGTAAGATACACCTCTTCCTCATGGTGAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
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| 3UTR TCA 90 bp | GAAATTTCTGTGTCCGGAGTGGTGAGTTTTACAAAATCTTCACCATaGGGAAGAGGTGTATCTTACAGAACCATTTGGCTGAATCGTAAG | + |
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Preference number: 1 (lower is better) Translates to: EISVSGVVSFTKSSP*GRGVSYRTIWLNRK Trigger: CTTACGATTCAGCCAAATGGTTCTGTAAGATACACCTCTTCCTCATGGTGAAGATTTTGTAAAACTCACCACTCCGGACACAGAAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
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| 3UTR-3UTR GCA 90 bp | GATCCGAGTATTGAGCCCCTCCTGAATCTCCCTGCGCTCCTCAGCCGTGTTTGGAGGACAAGCTCCAGATaGCAGCTGGGCGAGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: DPSIEPLLNLPALLSRVWRTSSR*QLGEAT Trigger: GGTGGCCTCGCCCAGCTGGCATCTGGAGCTTGTCCT...CCAAACACGGCTGAGGAGCGCAGGGAGATTCAGGAGGGGCTCAATACTCGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CAA 90 bp | CTGGACCACACGGCTGCACACGGACTCGGCAGCTTTGCAGAGCACTaGCCGCAGATAGTCCTCCGTTTTGTGCAGCACCGTGTAAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LDHTAAHGLGSFAEH*PQIVLRFVQHRVKV Trigger: GACCTTTACACGGTGCTGCACAAAACGGAGGACTATCTGCGGCAAGTGCTCTGCAAAGCTGCCGAGTCCGTGTGCAGCCGTGTGGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR CCA 90 bp | TACACTCCTGCAGACGGAGCAGTGGGCCTGAATGTCATTACACCCATGGCCAGCAGATGCCACCACACCTaGGTGAAGTGGTTCGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: YTPADGAVGLNVITPMASRCHHT*VKWFGG Trigger: TCCCCCGAACCACTTCACCCAGGTGTGGTGGCATCT...GCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCAGGAAGAGGAACATGTaGCACCACCAAAGAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KESVPGPMEEGACRSSKPRKRNM*HHQRAA Trigger: TGCAGCTCTTTGGTGGTGTCACATGTTCCTCTTCCT...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAAAGCAATTGCGCCCGTTGTGCAGCCACAGCAGAAAAAGCGGCTTTCCTGGACAGCCAGCACCGTaGGAGCCACCAACACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: MPKQLRPLCSHSRKSGFPGQPAP*EPPTLS Trigger: AGAGAGTGTTGGTGGCTCTCACGGTGCTGGCTGTCC...AGGAAAGCCGCTTTTTCTGCTGTGGCTGCACAACGGGCGCAATTGCTTTGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGGGCCTCGGAAAACTCCAGGGATATTCGGGTCCAGCTGCAAAGTCCTGCTGGACAGTGGGCTCCTaGGAGGATCATAATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GRGLGKLQGYSGPAAKSCWTVGS*EDHNGS Trigger: TGAGCCATTATGATCCTCCCAGGAGCCCACTGTCCA...GCAGGACTTTGCAGCTGGACCCGAATATCCCTGGAGTTTTCCGAGGCCCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CAA 90 bp | AACTCCTCACACGTCACTTCTCGGCAGCCTTCTTCCATGCGGCTGTaGCCCTCTTCTATGTCCTGGTTGCCCAGAAGAGACACCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: NSSHVTSRQPSSMRL*PSSMSWLPRRDTSS Trigger: GGAAGAGGTGTCTCTTCTGGGCAACCAGGACATAGAAGAGGGCAACAGCCGCATGGAAGAAGGCTGCCGAGAAGTGACGTGTGAGGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGGGCCTCGGAAAACTCCAGGGATATTCGGGTCCAGCTGCAAAGTCCTGCTCCAGCAGGACTACCTaGGACCATCTCAATCACTTC | + |
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Preference number: 2 (lower is better) Translates to: GRGLGKLQGYSGPAAKSCSSRTT*DHLNHF Trigger: GAAGTGATTGAGATGGTCTCAGGTAGTCCTGCTGGA...GCAGGACTTTGCAGCTGGACCCGAATATCCCTGGAGTTTTCCGAGGCCCCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCATCTACCACATGGTTCTaGAGGGCTGAGGCACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGSVQELKALCMPLLATSSTTWF*RAEAPK Trigger: TTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGA...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | TACACTCCTGCAGACGGAGCAGTGGGCCTGAATGTCATTACACCCATGGCCAGCTGGCTGCCAGAGGCTTaGCTTTTAAGGAAAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: YTPADGAVGLNVITPMASWLPEA*LLRKGT Trigger: GGTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCA...GCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCATTTGGTTCCTGTCCCTaGAAGCAGCTATCTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GGSVQELKALCMPLLATSFGSCP*KQLSLW Trigger: CCACAGAGATAGCTGCTTCCAGGGACAGGAACCAAA...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR TCA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTGGACCCAAGAAGCTGTaGAATTCTGGCTGCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CYSPAEAQAVHASQHAALGPKKL*NSGCQR Trigger: CCTCTGGCAGCCAGAATTTCACAGCTTCTTGGGTCC...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | GTAGTAACAAGTTTGAGTCCAGCAGGACTACCTGAGACCATCTCAATCACTTCCGCTCCAGATGCCAGCTaGGCGAGGCCACCACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VVTSLSPAGLPETISITSAPDAS*ARPPQP Trigger: TGGCTGTGGTGGCCTCGCCCAGCTGGCATCTGGAGC...GGAAGTGATTGAGATGGTCTCAGGTAGTCCTGCTGGACTCAAACTTGTTACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAAAGCAATTGCGCCCGTTGTGCAGCCACAGCAGAAAAAGCGGCTTTCCTCCATGGCCAGCTGAGTaGGGGGAAAGTTGTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: MPKQLRPLCSHSRKSGFPPWPAE*GESCRL Trigger: AAGTCTACAACTTTCCCCTCACTCAGCTGGCCATGG...AGGAAAGCCGCTTTTTCTGCTGTGGCTGCACAACGGGCGCAATTGCTTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCAGGATATACCGGCCGTCAAAGAACATCCTAAGGATCTGGGAGAAGACTTCATCTTCCTCACCTaGACCACACGGCTGCACACG | + |
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Preference number: 2 (lower is better) Translates to: QQQDIPAVKEHPKDLGEDFIFLT*TTRLHT Trigger: CGTGTGCAGCCGTGTGGTCCAGGTGAGGAAGATGAA...GTCTTCTCCCAGATCCTTAGGATGTTCTTTGACGGCCGGTATATCCTGCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCAACCCCAGCCTCAGATTaGTTTCTGAAATACTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: GGSVQELKALCMPLLATSTPASD*FLKYLA Trigger: AGCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGT...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR GCA 90 bp | CAGTACTCAATGGAGTGGATGGCCTGCGTCATCAGGATCTCCCCGAAGTTAAACATATTCGGGTCCAGCTaGAAAGTCCTGCTGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QYSMEWMACVIRISPKLNIFGSS*KVLLCL Trigger: CAGGCACAGCAGGACTTTGCAGCTGGACCCGAATAT...GTTTAACTTCGGGGAGATCCTGATGACGCAGGCCATCCACTCCATTGAGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTACTCAATGGAGTGGATGGCCTGCGTCATCAGGATCTCCCCGAAGTTAAACCTTCCATGCGGCTGTTaGCCTCTTCTATGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QYSMEWMACVIRISPKLNLPCGC*PLLCPG Trigger: ACCAGGACATAGAAGAGGGCAACAGCCGCATGGAAG...GTTTAACTTCGGGGAGATCCTGATGACGCAGGCCATCCACTCCATTGAGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR CCA 90 bp | TACACTCCTGCAGACGGAGCAGTGGGCCTGAATGTCATTACACCCATGGCCAGCCAGGGACAGTACATATaGCAGAAACTGTTTGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YTPADGAVGLNVITPMASQGQYI*QKLFGS Trigger: GGAACCAAACAGTTTCTGCCATATGTACTGTCCCTG...GCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CCA 90 bp | CAGTACTCAATGGAGTGGATGGCCTGCGTCATCAGGATCTCCCCGAAGTTAAACCTGCATAGGTCACAATaGTGTACCCTTTGCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: QYSMEWMACVIRISPKLNLHRSQ*CTLCRP Trigger: GGGCCTGCAAAGGGTACACCATTGTGACCTATGCAG...GTTTAACTTCGGGGAGATCCTGATGACGCAGGCCATCCACTCCATTGAGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CAA 90 bp | CTCTTACAGGACCCAAGAAGCTGTGAAATTCTGGCTGCCAGAGGCTaGGCTTTTAAGGAAAGGGACCCACACTCTACCACATGGTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLQDPRSCEILAARG*AFKERDPHSTTWFW Trigger: CCAGAACCATGTGGTAGAGTGTGGGTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCAGAATTTCACAGCTTCTTGGGTCCTGTAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGAGAACAGCCCCATCAGCAGCAGGATATACCGGCCGTCAAAGAACATCCTCAACTCTGCCTTGCTaGATCAGGCCAGAAACGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TQRTAPSAAGYTGRQRTSSTLPC*IRPETN Trigger: ATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGA...GGATGTTCTTTGACGGCCGGTATATCCTGCTGCTGATGGGGCTGTTCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCTGACTCACTCACTCACTGGACAGTGGGCTCCTGGGAGGATCATAATGGCCAGCATCCTTTCAAATaGTTCAACTCTGCCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RADSLTHWTVGSWEDHNGQHPFK*FNSALL Trigger: CAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTG...GCCATTATGATCCTCCCAGGAGCCCACTGTCCAGTGAGTGAGTGAGTCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATCACAACTGCCGTGACTaGTCTAACACAAGGATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNHNCRD*SNTRMK Trigger: CTTCATCCTTGTGTTAGACCAGTCACGGCAGTTGTG...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 90 bp | TTTGCAGGCCCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTaGCTGAATCAGGCCAGAAACGAATCTGTGTGCTGGACAAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FAGPPQHPFKCFNSA*LNQARNESVCWTKD Trigger: ATCCTTTGTCCAGCACACAGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR TCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATCTGTGTCCGGAGTGGTaGGTTTTACAAAATCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNLCPEW*VLQNLH Trigger: GTGAAGATTTTGTAAAACTCACCACTCCGGACACAG...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACGGAATACCAGTCAGATaGCACCACACCTGGGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RPASVALNILKHRDPFQNGIPVR*HHTWVK Trigger: CTTCACCCAGGTGTGGTGGCATCTGACTGGTATTCC...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACAACTCACATACATTCTaGAGCAGGCAGTGGGAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: RPASVALNILKHRDPFQNNSHTF*SRQWER Trigger: CCGCTCCCACTGCCTGCTCCAGAATGTATGTGAGTT...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 90 bp | CTTGCTGCAGCGTGCAATCATGCTATGCTGTCATCATTACTGAACTaGGAGGAGAGCAGACTGAAGGAGAAGGGAACAAACTTGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LAAACNHAMLSSLLN*EESRLKEKGTNLVP Trigger: AGGCACCAAGTTTGTTCCCTTCTCCTTCAGTCTGCTCTCCTCCAAGTTCAGTAATGATGACAGCATAGCATGATTGCACGCTGCAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACTCAAAGCCCTTTGCATaGCTCTACTGGCCACATCAC | + |
|
Preference number: 2 (lower is better) Translates to: RPASVALNILKHRDPFQNSKPFA*LYWPHH Trigger: GTGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGA...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCACCTAACTTGAGCTGTTaGAAAATATTATCTGACATC | + |
|
Preference number: 2 (lower is better) Translates to: GGSVQELKALCMPLLATSPNLSC*KILSDI Trigger: GATGTCAGATAATATTTTCCAACAGCTCAAGTTAGG...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATCTTGGGAAATCAAACTaGCCATCAGACCTTTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNLGKSN*PSDLYS Trigger: TGAATAAAGGTCTGATGGCCAGTTTGATTTCCCAAG...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAATCTTACAGAACCATTTaGCTGAATCGTAAGGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: SSPCLSACSSYRTQEAVKSYRTI*LNRKAI Trigger: GATTGCCTTACGATTCAGCCAAATGGTTCTGTAAGA...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAATTCTGGAGCAGGCAGTaGGAGCGGGGACCTGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: WEIKLAIRPLFRISAKVKFWSRQ*ERGPAD Trigger: ATCAGCAGGTCCCCGCTCCCACTGCCTGCTCCAGAA...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR GCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATTATCTGACATCTTCTTaGGATGGAATAACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNYLTSS*DGITSC Trigger: ACATGAAGTTATTCCATCGCAAGAAGATGTCAGATA...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR GCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATTCTTCATCTGTTCTTTaGTATAAAAATACACACGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNSSSVL*YKNTHG Trigger: GCCGTGTGTATTTTTATAGCAAAGAACAGATGAAGA...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR GCA 90 bp | TTATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTGCCAGCCCTGATGGAGGAGGGAGCGTaGAGGAGCTCAAAGCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFSKTCSNSKSQLDVPALMEEGA*RSSKPF Trigger: AAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTCCAT...CAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR TCA 90 bp | AGACCATCTCAATCACTTCCCAGCAAAAGCACAATAAACACAACAGAGCTCTCCCTGTGTCCGGAGTGGTaGGTTTTACAAAATCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RPSQSLPSKSTINTTELSLCPEW*VLQNLH Trigger: GTGAAGATTTTGTAAAACTCACCACTCCGGACACAG...GGAGAGCTCTGTTGTGTTTATTGTGCTTTTGCTGGGAAGTGATTGAGATGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAGAAGGGAACAAACTTGGTGCCTGCACCAACGTAGAATTTGTTCTGAAATGGCTTAGTCTGGGGTaGTTCTCATTTAACACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: EGEGNKLGACTNVEFVLKWLSLG*FSFNTS Trigger: ACTGGTGTTAAATGAGAATCACCCCAGACTAAGCCA...TTTCAGAACAAATTCTACGTTGGTGCAGGCACCAAGTTTGTTCCCTTCTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR-3UTR GCA 90 bp | TTATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTGCCAGCCCTGGGCAAGGCCAAGGCCTaGGTCGGTGGCATTAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LFSKTCSNSKSQLDVPALGKAKA*VGGIKY Trigger: ATATTTAATGCCACCGACGCAGGCCTTGGCCTTGCC...CAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CAA 90 bp | CCTGCTGATGACCCAGCAGTAATGTCTGAAAACACTATGCCTAACTaGAGCTGTTGGAAAATATTATCTGACATCTTCTTGCGATGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PADDPAVMSENTMPN*SCWKILSDIFLRWN Trigger: ATTCCATCGCAAGAAGATGTCAGATAATATTTTCCAACAGCTCAAGTTAGGCATAGTGTTTTCAGACATTACTGCTGGGTCATCAGCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR TCA 90 bp | AAACAATCAGGCCACACCCCAGCCTCAGATTGCTTTCTGAAATACTTAGCTAAAAGTTTTCAGCTAACCTaGACAGCTTGGGAAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KQSGHTPASDCFLKYLAKSFQLT*TAWEIK Trigger: TTTGATTTCCCAAGCTGTTCAGGTTAGCTGAAAACT...TTTAGCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGTGTGGCCTGATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR TCA 90 bp | TTATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTGCCAGCCCTGAGTGTTCAATGGGATTaGGCCAACTTCACTCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LFSKTCSNSKSQLDVPALSVQWD*ANFTQS Trigger: GCTTTGAGTGAAGTTGGCTCAATCCCATTGAACACT...CAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAAGACATCTTCTTGCGATaGAATAACTTCATGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WEIKLAIRPLFRISAKVKDIFLR*NNFMFL Trigger: AAGAAACATGAAGTTATTCCATCGCAAGAAGATGTC...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 72 bp | GATTGTAGCTCCGCTCTCTCTCGAGCCTTCCTCCAGTaGTCTGCGCAAGCCTGGCAGGTCCACCTCGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DCSSALSRAFLQ*SAQAWQVHLGA Trigger: TGCCCCGAGGTGGACCTGCCAGGCTTGCGCAGAGCACTGGAGGAAGGCTCGAGAGAGAGCGGAGCTACAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR TCA 72 bp | GCTCCAGATGCCAGCTGGGCGAGGCCACCACAGCCATaGCTTCCTGCTCCACAGTCACCTGCTCACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: APDASWARPPQP*LPAPQSPAHSC Trigger: ACAGCTGTGAGCAGGTGACTGTGGAGCAGGAAGTCATGGCTGTGGTGGCCTCGCCCAGCTGGCATCTGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR GCA 72 bp | CAGCACCGTGAGAGCCACCAACACTCTCTGGACGTGTaGCTGCCCTGGGTAGAGCCCGTGTGTCTTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QHRESHQHSLDV*LPWVEPVCLAG Trigger: ACCAGCAAGACACACGGGCTCTACCCAGGGCAGGCACACGTCCAGAGAGTGTTGGTGGCTCTCACGGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CCA 72 bp | CTCGGCATCCTAGCTGGAGCCTCGCTGCCGTCAGTGTaGACCCCACAGGGGCTGGAGCGATCTGATGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: LGILAGASLPSV*TPQGLERSDVT Trigger: AGTAACATCAGATCGCTCCAGCCCCTGTGGGGTCCACACTGACGGCAGCGAGGCTCCAGCTAGGATGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 72 bp | GAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATaGCTCTACTGGCCACATCACATCGGGCCTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EEGACRSSKPFA*LYWPHHIGPSH Trigger: GTGGGAAGGCCCGATGTGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR TCA 72 bp | GCCGTCAGTGTGGACCCCACAGGGGCTGGAGCGATCTaGTGTTACTCTCCAGCTGAGGCACAAGCAGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: AVSVDPTGAGAI*CYSPAEAQAVH Trigger: ATGGACTGCTTGTGCCTCAGCTGGAGAGTAACATCAGATCGCTCCAGCCCCTGTGGGGTCCACACTGACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 72 bp | AGATGGCCTTCATCTTCCTCACCTGGACCACACGGCTaGACACGGACTCGGCAGCTTTGCAGAGCACTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RWPSSSSPGPHG*TRTRQLCRALA Trigger: GGCAAGTGCTCTGCAAAGCTGCCGAGTCCGTGTGCAGCCGTGTGGTCCAGGTGAGGAAGATGAAGGCCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR GCA 72 bp | TATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTaGATGCCTCTACTGGCCACATCACATCGGGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YGGGSVQELKAL*MPLLATSHRAF Trigger: GAAGGCCCGATGTGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR GCA 72 bp | ATGTGCCAGCCCTGTAAGTTACCAGTGGACGGTCTGTaGCTTACTACACTCCTGCAGACGGAGCAGTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MCQPCKLPVDGL*LTTLLQTEQWA Trigger: GGCCCACTGCTCCGTCTGCAGGAGTGTAGTAAGGCACAGACCGTCCACTGGTAACTTACAGGGCTGGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CCA 72 bp | GTCACGCTGCCCCTCCCGGCAATCCTGCGAGCATTTTaGGAGAACTCACATACATTCTGGAGCAGGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VTLPLPAILRAF*ENSHTFWSRQW Trigger: CCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGATTGCCGGGAGGGGCAGCGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CCA 72 bp | AGATGCCACCACACCTGGGTGAAGTGGTTCGGGGGATaGAAACAATCAGGCCACACCCCAGCCTCAGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: RCHHTWVKWFGG*KQSGHTPASDC Trigger: GCAATCTGAGGCTGGGGTGTGGCCTGATTGTTTCCATCCCCCGAACCACTTCACCCAGGTGTGGTGGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CCA 72 bp | AGGATCTGGGGGAAAAGGAGTCTGTCCCAGGTCCTATaGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RIWGKRSLSQVL*RRERAGAQSPL Trigger: CAAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTTTTCCCCCAGATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CCA 72 bp | CCTCCAGGCACTCGTCCAGCTCTGCATAGGTCACAATaGTGTACCCTTTGCAGGCCCGCCACAGCATCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPGTRPALHRSQ*CTLCRPATASF Trigger: AAAGGATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTGACCTATGCAGAGCTGGACGAGTGCCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | ACTCCTCACACGTCACTTCTCGGCAGCCTTCTTCCATaGGGCTGTTGCCCTCTTCTATGTCCTGGTTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TPHTSLLGSLLP*GCCPLLCPGCP Trigger: TGGGCAACCAGGACATAGAAGAGGGCAACAGCCGCATGGAAGAAGGCTGCCGAGAAGTGACGTGTGAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CCA 72 bp | GGAATACCAGTCAGATGCCACCACACCTGGGTGAAGTaGTTCGGGGGATGGAAACAATCAGGCCACACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GIPVRCHHTWVK*FGGWKQSGHTP Trigger: TGGGGTGTGGCCTGATTGTTTCCATCCCCCGAACCACTTCACCCAGGTGTGGTGGCATCTGACTGGTATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CCA 72 bp | CCCCTCCTGAATCTCCCTGCGCTCCTCAGCCGTGTTTaGATACGGGTAGATGTGGCAGTGGTAACAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PLLNLPALLSRV*IRVDVAVVTVT Trigger: TGTGACTGTTACCACTGCCACATCTACCCGTATCCAAACACGGCTGAGGAGCGCAGGGAGATTCAGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGGATTGTGTTCATGAACGAGGGGATTGTAGCTCCGCTCTCTCTCGAGCCTTCACAATGGTGTACCCTTaGCAGGCCCGCCACAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RDCVHERGDCSSALSRAFTMVYP*QARHSI Trigger: GATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGT...GAAGGCTCGAGAGAGAGCGGAGCTACAATCCCCTCGTTCATGAACACAATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | GCCAGAAACGAATCTGTGTGCTGGACAAAGGATTGCTaGAGCTGCCTTTCCCATGGCCAGCTGAGTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARNESVCWTKDC*SCLSHGQLSEG Trigger: CCCCTCACTCAGCTGGCCATGGGAAAGGCAGCTTCAGCAATCCTTTGTCCAGCACACAGATTCGTTTCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | GGGAGTTCAATACTGTCAGGCAGACTAGTCCTTCCATaGGTCTATCAGTACAGTGCGGCTCTGGCTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSSILSGRLVLP*VYQYSAALAGS Trigger: GGAGCCAGCCAGAGCCGCACTGTACTGATAGACGCATGGAAGGACTAGTCTGCCTGACAGTATTGAACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CCA 72 bp | GGAGAAGACACCGTGAGAGCTGACTCACTCACTCACTaGACAGTGGGCTCCTGGGAGGATCATAATGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GEDTVRADSLTH*TVGSWEDHNGS Trigger: TGAGCCATTATGATCCTCCCAGGAGCCCACTGTCCAGTGAGTGAGTGAGTCAGCTCTCACGGTGTCTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCAGCTAACCTGAACAGCTaGGGAAATCAAACTGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GGSVQELKALCMPLLATSANLNS*GNQTGH Trigger: ATGGCCAGTTTGATTTCCCAAGCTGTTCAGGTTAGC...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTCTGGCTGCCAGAGGCTaGGCTTTTAAGGAAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CYSPAEAQAVHASQHAALLAARG*AFKERD Trigger: GTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCAG...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR TCA 72 bp | TCCTTGGAATACCAGTCAGATGCCACCACACCTGGGTaGAGTGGTTCGGGGGATGGAAACAATCAGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SLEYQSDATTPG*SGSGDGNNQAT Trigger: TGTGGCCTGATTGTTTCCATCCCCCGAACCACTTCACCCAGGTGTGGTGGCATCTGACTGGTATTCCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR TCA 72 bp | TGCCTTACTACACTCCTGCAGACGGAGCAGTGGGCCTaGATGTCATTACACCCATGGCCAGCATTGCATACC | + |
|
Preference number: 3 (lower is better) Translates to: CLTTLLQTEQWA*MSLHPWPALHT Trigger: GGTATGCAATGCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTAGTAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR GCA 72 bp | CTCGATCAGGATGCTCGGGGCCTCTCTCGAGGTCTCTaGCGAGTATGCCAGCCACTTGTAAATGATCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LDQDARGLSRGL*RVCQPLVNDHE Trigger: TTCATGATCATTTACAAGTGGCTGGCATACTCGGCAGAGACCTCGAGAGAGGCCCCGAGCATCCTGATCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCAAAGCAATTGCGCCCGTTGTGCAGCCACAGCAGAAAAAGCGGCTTTCCTGCTATGAGGCACTTGTaGGTGACGTCAAAGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MPKQLRPLCSHSRKSGFPAMRHL*VTSKLH Trigger: GTGCAGCTTTGACGTCACCAACAAGTGCCTCATAGC...AGGAAAGCCGCTTTTTCTGCTGTGGCTGCACAACGGGCGCAATTGCTTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | GTACCCTTTGCAGGCCCGCCACAGCATCCTTTCAAATaGTTCAACTCTGCCTTGCTGAATCAGGCCAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VPFAGPPQHPFK*FNSALLNQARN Trigger: GTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAAGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | CGTCCAGCTCTGCATAGGTCACAATGGTGTACCCTTTaGAGGCCCGCCACAGCATCCTTTCAAATGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RPALHRSQWCTL*RPATASFQMLQ Trigger: TTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTGACCTATGCAGAGCTGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | CTGATGGTGCTGTCATTCCAAAGTACCATCTTCCTCTaGTCCTCTGGAGAGTGGCTGGAGCTGTACATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LMVLSFQSTIFL*SSGEWLELYMA Trigger: TGCCATGTACAGCTCCAGCCACTCTCCAGAGGAGCAGAGGAAGATGGTACTTTGGAATGACAGCACCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CCA 72 bp | AGGCCCCATCACAACTGCCAACAGGGACAGTACATATaGCAGAAACTGTTTGGTTCCTGTCCCTGGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPHHNCQQGQYI*QKLFGSCPWKQ Trigger: CTGCTTCCAGGGACAGGAACCAAACAGTTTCTGCCATATGTACTGTCCCTGTTGGCAGTTGTGATGGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTCACCCCAGCCTCAGATaGCTTTCTGAAATACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: CYSPAEAQAVHASQHAALHPSLR*LSEILS Trigger: GCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGTG...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGAGAAGGGAACAAACTTGGTGCCTGCACCAACGTAGAATTTGTTCTGAAAACGGACTCGGCAGCTTaGCAGAGCACTTGCCGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EGEGNKLGACTNVEFVLKTDSAA*QSTCRR Trigger: TCTGCGGCAAGTGCTCTGCAAAGCTGCCGAGTCCGT...TTTCAGAACAAATTCTACGTTGGTGCAGGCACCAAGTTTGTTCCCTTCTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCAAAGCAATTGCGCCCGTTGTGCAGCCACAGCAGAAAAAGCGGCTTTCCTTTCATCTTGAAGGAGTaGAGGAACGTGAGGCGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MPKQLRPLCSHSRKSGFPFILKE*RNVRRF Trigger: AAACCGCCTCACGTTCCTCAACTCCTTCAAGATGAA...AGGAAAGCCGCTTTTTCTGCTGTGGCTGCACAACGGGCGCAATTGCTTTGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | CTCCCCAAAAGGAAATCAGGAACACGTACCACTTTATaGCTTCACCCGTTTCAGGGTCCTCCAGGCACTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LPKRKSGTRTTL*LHPFQGPPGTR Trigger: ACGAGTGCCTGGAGGACCCTGAAACGGGTGAAGTCATAAAGTGGTACGTGTTCCTGATTTCCTTTTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | TCAAAGAACATCCTAAGGATCTGGGAGAAGACACCGTaGGAGCTGACTCACTCACTCACTGGACAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SKNILRIWEKTP*ELTHSLTGQWA Trigger: AGCCCACTGTCCAGTGAGTGAGTGAGTCAGCTCTCACGGTGTCTTCTCCCAGATCCTTAGGATGTTCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | GGATATTCGGGTCCAGCTGCAAAGTCCTGCTGTGCCTaGTGGTGCTGTCATTCCAAAGTACCATCTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GYSGPAAKSCCA*WCCHSKVPSSS Trigger: AGAGGAAGATGGTACTTTGGAATGACAGCACCATCAGGCACAGCAGGACTTTGCAGCTGGACCCGAATATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | AGTTGTAGACTTTCAAGACCAAACCAGATACCCAGCTaGTGTGCCCTCTACACTGACGCAGGCTGTGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCRLSRPNQIPS*CALYTDAGCED Trigger: GTCTTCACAGCCTGCGTCAGTGTAGAGGGCACAGCAGCTGGGTATCTGGTTTGGTCTTGAAAGTCTACAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CCA 72 bp | TGCAGCTCTTACAGGACCCAAGAAGCTGTGAAATTCTaGCTGCCAGAGGCTTGGCTTTTAAGGAAAGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: CSSYRTQEAVKF*LPEAWLLRKGT Trigger: GGTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCAGAATTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGTACTCAATGGAGTGGATGGCCTGCGTCATCAGGATCTCCCCGAAGTTAAACCATATCTTCTTAACCTaGTGGCCAATCTGCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QYSMEWMACVIRISPKLNHIFLT*WPICSP Trigger: GGGAGAGCAGATTGGCCACAAGGTTAAGAAGATATG...GTTTAACTTCGGGGAGATCCTGATGACGCAGGCCATCCACTCCATTGAGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | CATCACATCGGGCCTTCCCACCAGCATAAGTCTATGTaGCGTGGCTCCATTGATGTTGTTCTAGGAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HHIGPSHQHKSM*RGSIDVVLGRG Trigger: TCCTCTTCCTAGAACAACATCAATGGAGCCACGTCACATAGACTTATGCTGGTGGGAAGGCCCGATGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR TCA 72 bp | GCGAGCATTACCTCCTGTGACTGGCTTAGTCTGGGGTaGTTCTCATTTAACACCAGTAAGAGGGCAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASITSCDWLSLG*FSFNTSKRANR Trigger: CCTGTTTGCCCTCTTACTGGTGTTAAATGAGAATCACCCCAGACTAAGCCAGTCACAGGAGGTAATGCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CCA 72 bp | ACCCAAGAAGCTGTGAAATTCTGGCTGCCAGAGGCTTaGCTTTTAAGGAAAGGGACCCACACTCTACCACAT | + |
|
Preference number: 3 (lower is better) Translates to: TQEAVKFWLPEA*LLRKGTHTLPH Trigger: ATGTGGTAGAGTGTGGGTCCCTTTCCTTAAAAGCCAAGCCTCTGGCAGCCAGAATTTCACAGCTTCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR TCA 72 bp | AATCATCCTGTGGAGTTGCACGGTCTGAGGATTTCTTaGTGTATTAGAGCAGTGGTCTGCTGGTGGGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NHPVELHGLRIS*CIRAVVCWWAN Trigger: GTTTGCCCACCAGCAGACCACTGCTCTAATACATCAAGAAATCCTCAGACCGTGCAACTCCACAGGATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR GCA 72 bp | GAGTTCCTAAGGCCCATCTGGATAGTGTGGCATGTATaGATACCCAGACTTCCTCCCTCCGTAGAAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: EFLRPIWIVWHV*IPRLPPSVEKC Trigger: ACATTTTTCTACGGAGGGAGGAAGTCTGGGTATGCATACATGCCACACTATCCAGATGGGCCTTAGGAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CCA 72 bp | CTCTTCACAACACCACAAGAGTTCCTAAGGCCCATCTaGATAGTGTGGCATGTATGCATACCCAGACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFTTPQEFLRPI*IVWHVCIPRLP Trigger: AGGAAGTCTGGGTATGCATACATGCCACACTATCCAGATGGGCCTTAGGAACTCTTGTGGTGTTGTGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTTTATCTGACATCTTCTaGCGATGGAATAACTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: CYSPAEAQAVHASQHAALLSDIF*RWNNFM Trigger: CATGAAGTTATTCCATCGCAAGAAGATGTCAGATAA...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR TCA 72 bp | TGCCTGCACCAACGTAGAATTTGTTCTGAAATTCAGTaGAGCCTTATGGCGTGGAGGAATGCAGAAAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: CLHQRRICSEIQ*SLMAWRNAERP Trigger: GGGTCTTTCTGCATTCCTCCACGCCATAAGGCTTCACTGAATTTCAGAACAAATTCTACGTTGGTGCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
||
| 3UTR GCA 72 bp | CCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTaGCAGCCCTGTAAGTTACCAGTGGACGGTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PKLVQTLNHSLM*QPCKLPVDGLC Trigger: GCACAGACCGTCCACTGGTAACTTACAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR TCA 72 bp | CATGAGGAAGAGGTGTATCTTACAGAACCATTTGGCTaGATCGTAAGGCAATCAACGAGGGTGGAACTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HEEEVYLTEPFG*IVRQSTRVELS Trigger: GGAAAGTTCCACCCTCGTTGATTGCCTTACGATTCAGCCAAATGGTTCTGTAAGATACACCTCTTCCTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | GTGTCCGGAGTGGTGAGTTTTACAAAATCTTCACCATaGGGAAGAGGTGTATCTTACAGAACCATTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSGVVSFTKSSP*GRGVSYRTIWL Trigger: CAGCCAAATGGTTCTGTAAGATACACCTCTTCCTCATGGTGAAGATTTTGTAAAACTCACCACTCCGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
||
| 3UTR GCA 72 bp | TTTAACTGTGACAGGCTTCAACTGAGAAGTTACTCTTaGTCTGTGTTCTGTACCCAGGTAAGAGATGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FNCDRLQLRSYS*SVFCTQVRDAS Trigger: ACTGGCATCTCTTACCTGGGTACAGAACACAGAGCAAGAGTAACTTCTCAGTTGAAGCCTGTCACAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR GCA 72 bp | AAATTCTACCCAGTGAAGCCTTATGGCGTGGAGGAATaGAGAAAGACCCTCCATGACCAGAAGGATAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KFYPVKPYGVEE*RKTLHDQKDKN Trigger: ATTTTTATCCTTCTGGTCATGGAGGGTCTTTCTGCATTCCTCCACGCCATAAGGCTTCACTGGGTAGAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR TCA 72 bp | CAAGGACATTTCTATTTAACTGTGACAGGCTTCAACTaGGAAGTTACTCTTGCTCTGTGTTCTGTACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGHFYLTVTGFN*EVTLALCSVPR Trigger: CCTGGGTACAGAACACAGAGCAAGAGTAACTTCTCAGTTGAAGCCTGTCACAGTTAAATAGAAATGTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTGCCAGCCCTGGTGGCATTAAATATCTaGAAGCATAGAGACCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LFSKTCSNSKSQLDVPALVALNI*KHRDPF Trigger: GAATGGGTCTCTATGCTTCAAGATATTTAATGCCAC...CAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAATGCCACTTTGTCACATaGTCTCCGATTATTAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: WEIKLAIRPLFRISAKVKCHFVT*SPIIKR Trigger: TCTTTTAATAATCGGAGACAATGTGACAAAGTGGCA...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | GAAGAGGACAAGCTCCAGATGCCAGCTGGGCGAGGCCACCACAGCCATGACTTCGCTGCGCCAGGCACATaGTCTCGCTGCGGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEDKLQMPAGRGHHSHDFAAPGT*SRCGRE Trigger: CTCTCTTCCGCAGCGAGAGCATGTGCCTGGCGCAGC...GAAGTCATGGCTGTGGTGGCCTCGCCCAGCTGGCATCTGGAGCTTGTCCTCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGATGCCAGCTGGGCGAGGCCACCACAGCCATGACTTCCTGCTCCACAGTCGACTGCAGGAAGAGCTaGGCCAGGCACATGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRCQLGEATTAMTSCSTVDCRKS*ARHMLS Trigger: CGAGAGCATGTGCCTGGCGCAGCTCTTCCTGCAGTC...GACTGTGGAGCAGGAAGTCATGGCTGTGGTGGCCTCGCCCAGCTGGCATCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCCGAGCCTTCCTCCAGTaGTCTGCGCAAGCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KESVPGPMEEGACRSSKPRAFLQ*SAQAWQ Trigger: CTGCCAGGCTTGCGCAGAGCACTGGAGGAAGGCTCG...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCGACACTCGTAGGCCGTaGCCGACTGCAGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KESVPGPMEEGACRSSKPDTRRP*PTAGRA Trigger: AGCTCTTCCTGCAGTCGGGCACGGCCTACGAGTGTC...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCATTGAGGTCTCGGAACTaGACCAGGCCCTTCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSVQELKALCMPLLATSLRSRN*TRPFSP Trigger: GGGCGAGAAGGGCCTGGTGCAGTTCCGAGACCTCAA...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTGTGGTGCGGGAGGACTaGCCTCTCCTTCAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYSPAEAQAVHASQHAALVVRED*PLLQAG Trigger: CCCTGCCTGAAGGAGAGGCCAGTCCTCCCGCACCAC...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCATATTCGGGTCCAGCTaGAAAGTCCTGCTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KESVPGPMEEGACRSSKPIFGSS*KVLLCL Trigger: CAGGCACAGCAGGACTTTGCAGCTGGACCCGAATAT...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCAGACTGAAGGAGAAGGGAACAAACTTGGTGCCTGCACCAACGTAGAAGTGGTGCGGGAGGACTaGCCTCTCCTTCAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEQTEGEGNKLGACTNVEVVRED*PLLQAG Trigger: CCCTGCCTGAAGGAGAGGCCAGTCCTCCCGCACCAC...TTCTACGTTGGTGCAGGCACCAAGTTTGTTCCCTTCTCCTTCAGTCTGCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCAGGCTGGAGCTGTACATaGCAGATACGTTCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSVQELKALCMPLLATSGWSCT*QIRSTQ Trigger: CTGGGTGGAACGTATCTGCCATGTACAGCTCCAGCC...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCCCCTCTTCTATGTCCTaGTTGCCCAGAAGAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: KESVPGPMEEGACRSSKPPSSMS*LPRRDT Trigger: GGTGTCTCTTCTGGGCAACCAGGACATAGAAGAGGG...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 72 bp | CTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTTaGCATGCCTCTACTGGCCACATCACATCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWRRERAGAQSP*HASTGHITSGL Trigger: AAGGCCCGATGTGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 72 bp | AGTTTCCGCCCCAGGTCCCAGCTCCAGAACACAGCCTaGACGAATCATCCTGTGGAGTTGCACGGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRPRSQLQNTA*TNHPVELHGLR Trigger: CCTCAGACCGTGCAACTCCACAGGATGATTCGTCAAGGCTGTGTTCTGGAGCTGGGACCTGGGGCGGAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 72 bp | GCCCCTCCTGAATCTCCCTGCGCTCCTCAGCCGTGTTaGGATACGGGTAGATGTGGCAGTGGTAACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: APPESPCAPQPC*DTGRCGSGNSH Trigger: GTGACTGTTACCACTGCCACATCTACCCGTATCCAAACACGGCTGAGGAGCGCAGGGAGATTCAGGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR TCA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTGGACAGCCAGCACCGTaGGAGCCACCAACACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CYSPAEAQAVHASQHAALGQPAP*EPPTLS Trigger: AGAGAGTGTTGGTGGCTCTCACGGTGCTGGCTGTCC...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCACTGCAAAGAAAGCCATaGCAGGCAGCAGCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSVQELKALCMPLLATSLQRKP*QAAAAR Trigger: TCTTGCTGCTGCTGCCTGTCATGGCTTTCTTTGCAG...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTGACTGCAGGAAGAGCTaGGCCAGGCACATGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CYSPAEAQAVHASQHAALDCRKS*ARHMLS Trigger: CGAGAGCATGTGCCTGGCGCAGCTCTTCCTGCAGTC...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATTCAGAGAGCTGTGCATaGGCCAGGCTGAGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNSESCA*ARLSAQ Trigger: CTGGGCACTCAGCCTGGCCCATGCACAGCTCTCTGA...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 72 bp | TGTCACGCTGCCCCTCCCGGCAATCCTGCGAGCATTTaGGGAGAACTCACATACATTCTGGAGCAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CHAAPPGNPASI*GELTYILEQAV Trigger: CACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGATTGCCGGGAGGGGCAGCGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 72 bp | CACGTCACTTCTCGGCAGCCTTCTTCCATGCGGCTGTaGCCCTCTTCTATGTCCTGGTTGCCCAGAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HVTSRQPSSMRL*PSSMSWLPRRD Trigger: GTCTCTTCTGGGCAACCAGGACATAGAAGAGGGCAACAGCCGCATGGAAGAAGGCTGCCGAGAAGTGACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR TCA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCTCAACTCTGCCTTGCTaGATCAGGCCAGAAACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KESVPGPMEEGACRSSKPSTLPC*IRPETN Trigger: ATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGA...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | ATAGGTGGTGTCCACACGCAGCCCCACGCGCATCAGCATGGCCCACAGCACATCGAAACTCTTCATACGTaGGCTCAAACTCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGGVHTQPHAHQHGPQHIETLHT*AQTPHS Trigger: GGAATGTGGAGTTTGAGCCCACGTATGAAGAGTTTC...GATGTGCTGTGGGCCATGCTGATGCGCGTGGGGCTGCGTGTGGACACCACCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| 3UTR CAA 72 bp | TCCACCTCGGGGCACCAGACCTCAGCTATGAGGCACTaGTTGGTGACGTCAAAGCTGCACATGTTGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: STSGHQTSAMRH*LVTSKLHMLSM Trigger: CATGCTCAACATGTGCAGCTTTGACGTCACCAACAAGTGCCTCATAGCTGAGGTCTGGTGCCCCGAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACGCTGCGCCAGGCACATaGTCTCGCTGCGGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPASVALNILKHRDPFQNAAPGT*SRCGRE Trigger: CTCTCTTCCGCAGCGAGAGCATGTGCCTGGCGCAGC...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | TACACTCCTGCAGACGGAGCAGTGGGCCTGAATGTCATTACACCCATGGCCAGCGAATATCAGCTCTGGTaGTTTCCTGCACCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: YTPADGAVGLNVITPMASEYQLW*FPAPGT Trigger: TGTACCTGGTGCAGGAAATCACCAGAGCTGATATTC...GCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCAGGATATACCGGCCGTCAAAGAACATCCTAAGGATCTGGGAGAAGACATGTTTAAGAGGTGGTaGGGGAGGACTGGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQQDIPAVKEHPKDLGEDMFKRW*GRTGLS Trigger: GGAGAGGCCAGTCCTCCCGCACCACCTCTTAAACAT...GTCTTCTCCCAGATCCTTAGGATGTTCTTTGACGGCCGGTATATCCTGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR GCA 90 bp | TACACTCCTGCAGACGGAGCAGTGGGCCTGAATGTCATTACACCCATGGCCAGCCTTCTATGTCCTGGTTaGCCAGAAGAGACACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTPADGAVGLNVITPMASLLCPG*PEETPL Trigger: AAGAGGTGTCTCTTCTGGGCAACCAGGACATAGAAG...GCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | TGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGCGGGTGCTGTCATCATTACTaGACTTGGAGGAGAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CEHFGRTHIHSGAGSGSGCCHHY*TWRRAD Trigger: GTCTGCTCTCCTCCAAGTTCAGTAATGATGACAGCA...CCCGCTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACCCTCCTGAATCTCCCTaGGCTCCTCAGCCGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPASVALNILKHRDPFQNPPESP*APQPCL Trigger: CAAACACGGCTGAGGAGCGCAGGGAGATTCAGGAGG...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATTGCAAAGTCCTGCTGTaGCTGATGGTGCTGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNCKVLL*LMVLSF Trigger: GAATGACAGCACCATCAGGCACAGCAGGACTTTGCA...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | ATCCTGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGCTTCCATGCGGCTGTTaGCCTCTTCTATGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRAFWENSHTFWSRQWELPCGC*PLLCPG Trigger: ACCAGGACATAGAAGAGGGCAACAGCCGCATGGAAG...CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACATGGAGTGGATGGCCTaGGTCATCAGGATCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPASVALNILKHRDPFQNMEWMA*VIRISP Trigger: CGGGGAGATCCTGATGACGCAGGCCATCCACTCCAT...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGCTGCATAGGTCACAATaGTGTACCCTTTGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRAFWENSHTFWSRQWELHRSQ*CTLCRP Trigger: GGGCCTGCAAAGGGTACACCATTGTGACCTATGCAG...CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CCA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAACCTCTGGAGAGTGGCTaGAGCTGTACATGGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSPCLSACSSYRTQEAVKPLESG*SCTWQI Trigger: TATCTGCCATGTACAGCTCCAGCCACTCTCCAGAGG...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | AGGGATTGTGTTCATGAACGAGGGGATTGTAGCTCCGCTCTCTCTCGAGCCTTCGAATATCAGCTCTGGTaGTTTCCTGCACCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RDCVHERGDCSSALSRAFEYQLW*FPAPGT Trigger: TGTACCTGGTGCAGGAAATCACCAGAGCTGATATTC...GAAGGCTCGAGAGAGAGCGGAGCTACAATCCCCTCGTTCATGAACACAATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAAAAGTCCTGCTGTGCCTaGTGGTGCTGTCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPCLSACSSYRTQEAVKKSCCA*WCCHSK Trigger: TTTGGAATGACAGCACCATCAGGCACAGCAGGACTT...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | CAATCATGCTATGCTGTCATCATTACTGAACTTGGAGGAGAGCAGACTGAAGGATTGAGGTCTCGGAACTaGACCAGGCCCTTCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSCYAVIITELGGEQTEGLRSRN*TRPFSP Trigger: GGGCGAGAAGGGCCTGGTGCAGTTCCGAGACCTCAA...TCCTTCAGTCTGCTCTCCTCCAAGTTCAGTAATGATGACAGCATAGCATGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CAA 72 bp | CCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTaGCTGAATCAGGCCAGAAACGAATCTGTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQHPFKCFNSA*LNQARNESVCW Trigger: CCAGCACACAGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CAA 72 bp | ATAGTCCTCCGTTTTGTGCAGCACCGTGTAAAGGTCTaGGATCCGAGTATTGAGCCCCTCCTGAATCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLRFVQHRVKV*DPSIEPLLNLP Trigger: AGGGAGATTCAGGAGGGGCTCAATACTCGGATCCAAGACCTTTACACGGTGCTGCACAAAACGGAGGACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR TCA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATTCTGGAAACCTTCAGTaGATTTGTTGGTGCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNSGNLQ*ICWCGS Trigger: TGATCCGCACCAACAAATTCACTGAAGGTTTCCAGA...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | GGAGAGCAGACTGAAGGAGAAGGGAACAAACTTGGTGCCTGCACCAACGTAGAACTTCTATGTCCTGGTTaGCCAGAAGAGACACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEQTEGEGNKLGACTNVELLCPG*PEETPL Trigger: AAGAGGTGTCTCTTCTGGGCAACCAGGACATAGAAG...TTCTACGTTGGTGCAGGCACCAAGTTTGTTCCCTTCTCCTTCAGTCTGCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
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| CDS-3UTR CCA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTGATGGTAAAGAGAGCTaGGTTCACTTCTCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CYSPAEAQAVHASQHAALDGKES*VHFSVA Trigger: AGCTACAGAGAAGTGAACCCAGCTCTCTTTACCATC...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CCA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAAAGAAGGGAACAAACTTaGTGCCTGCACCAACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPCLSACSSYRTQEAVKRREQT*CLHQRR Trigger: TCTACGTTGGTGCAGGCACCAAGTTTGTTCCCTTCT...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR TCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACTGGAGGAGAGCAGACTaGAGGAGAAGGGAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RPASVALNILKHRDPFQNWRRAD*RRREQT Trigger: AGTTTGTTCCCTTCTCCTTCAGTCTGCTCTCCTCCA...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR GCA 90 bp | TGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGCGGGTTCTGCAGCTGTTCCTaGATTTCTAGGACATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CEHFGRTHIHSGAGSGSGFCSCS*ISRTCL Trigger: TAAACATGTCCTAGAAATGCAGGAACAGCTGCAGAA...CCCGCTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CCA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAAGAAACTCTTCATACGTaGGCTCAAACTCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPCLSACSSYRTQEAVKETLHT*AQTPHS Trigger: GGAATGTGGAGTTTGAGCCCACGTATGAAGAGTTTC...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGAAGGGAACAAACTTGGTGCCTGCACCAACGTAGAATTTGTTCTGAAACTTCCATGCGGCTGTTaGCCTCTTCTATGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGEGNKLGACTNVEFVLKLPCGC*PLLCPG Trigger: ACCAGGACATAGAAGAGGGCAACAGCCGCATGGAAG...TTTCAGAACAAATTCTACGTTGGTGCAGGCACCAAGTTTGTTCCCTTCTCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
||
| CDS-3UTR GCA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTAACAAACTTGGTGCCTaGACCAACGTAGAATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYSPAEAQAVHASQHAALNKLGA*TNVEFV Trigger: AACAAATTCTACGTTGGTGCAGGCACCAAGTTTGTT...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CCA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAAGCATCCACGATGTTCTaGAAACCTTCAGTGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPCLSACSSYRTQEAVKASTMF*KPSVNL Trigger: CAAATTCACTGAAGGTTTCCAGAACATCGTGGATGC...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CCA 90 bp | TGCACCAACGTAGAATTTGTTCTGAAATTCAGTGAAGCCTTATGGCGTGGAGGACCCTCTTCTATGTCCTaGTTGCCCAGAAGAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: CTNVEFVLKFSEALWRGGPSSMS*LPRRDT Trigger: GGTGTCTCTTCTGGGCAACCAGGACATAGAAGAGGG...TCCTCCACGCCATAAGGCTTCACTGAATTTCAGAACAAATTCTACGTTGGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACTGGCTTAGTCTGGGGTaGTTCTCATTTAACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPASVALNILKHRDPFQNWLSLG*FSFNTS Trigger: ACTGGTGTTAAATGAGAATCACCCCAGACTAAGCCA...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | AAACAATCAGGCCACACCCCAGCCTCAGATTGCTTTCTGAAATACTTAGCTAAAAGCAGTCGTTGTAGATaGGGCCGGTGTACACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQSGHTPASDCFLKYLAKSSRCR*GRCTQR Trigger: TCTCTGTGTACACCGGCCTCATCTACAACGACTGCT...TTTAGCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGTGTGGCCTGATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AAACAATCAGGCCACACCCCAGCCTCAGATTGCTTTCTGAAATACTTAGCTAAAAGTACCATCTTCCTCTaGTCCTCTGGAGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQSGHTPASDCFLKYLAKSTIFL*SSGEWL Trigger: CAGCCACTCTCCAGAGGAGCAGAGGAAGATGGTACT...TTTAGCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGTGTGGCCTGATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| 3UTR CAA 72 bp | CAAGCAGGAGAGCCATCGCTGTGCCACTTTGTCACATaGTCTCCGATTATTAAAAGAAGATCAGGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGEPSLCHFVT*SPIIKRRSGCH Trigger: GTGACAGCCTGATCTTCTTTTAATAATCGGAGACAATGTGACAAAGTGGCACAGCGATGGCTCTCCTGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTGCCAGCCCTGATGTTTAAGAGGTGGTaGGGGAGGACTGGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSKTCSNSKSQLDVPALMFKRW*GRTGLS Trigger: GGAGAGGCCAGTCCTCCCGCACCACCTCTTAAACAT...CAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AAACAATCAGGCCACACCCCAGCCTCAGATTGCTTTCTGAAATACTTAGCTAAATATGGCGTGGAGGAATaGAGAAAGACCCTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQSGHTPASDCFLKYLAKYGVEE*RKTLHD Trigger: GTCATGGAGGGTCTTTCTGCATTCCTCCACGCCATA...TTTAGCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGTGTGGCCTGATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTTGATGTGCCAGCCCTGTTCATCTTCCTCACCTaGACCACACGGCTGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: LFSKTCSNSKSQLDVPALFIFLT*TTRLHT Trigger: CGTGTGCAGCCGTGTGGTCCAGGTGAGGAAGATGAA...CAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACAAAGAACTTACATTTTaGTTGAGGTCTCGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPASVALNILKHRDPFQNKELTF*LRSRNC Trigger: GCAGTTCCGAGACCTCAATCAAAATGTAAGTTCTTT...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGTTCCTAAAGTGCAAGTaGTTAAATATTCCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILRAFWENSHTFWSRQWEFLKCK*LNIPRT Trigger: TGTTCTGGGAATATTTAACCACTTGCACTTTAGGAA...CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AAACAATCAGGCCACACCCCAGCCTCAGATTGCTTTCTGAAATACTTAGCTAAAAGGGAACAAACTTGGTaGCTGCACCAACGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: KQSGHTPASDCFLKYLAKREQTW*LHQRRI Trigger: AATTCTACGTTGGTGCAGGCACCAAGTTTGTTCCCT...TTTAGCTAAGTATTTCAGAAAGCAATCTGAGGCTGGGGTGTGGCCTGATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTGAAATTCTACCCAGTGAAGCCTTATGGCGTGGAGGAATGCAGAAAGAAAGAACTTACATTTTaGTTGAGGTCTCGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVLKFYPVKPYGVEECRKKELTF*LRSRNC Trigger: GCAGTTCCGAGACCTCAATCAAAATGTAAGTTCTTT...CTTTCTGCATTCCTCCACGCCATAAGGCTTCACTGGGTAGAATTTCAGAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| CDS-3UTR TCA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAACAAAGCTGCACATGTTaGGCATGTGGTAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WEIKLAIRPLFRISAKVKQSCTC*ACGRWP Trigger: AGGCCATCTACCACATGCTCAACATGTGCAGCTTTG...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
||
| CDS-3UTR GCA 90 bp | AGACCATCTCAATCACTTCCCAGCAAAAGCACAATAAACACAACAGAGCTCTCCTTCTGCAGCTGTTCCTaGATTTCTAGGACATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RPSQSLPSKSTINTTELSFCSCS*ISRTCL Trigger: TAAACATGTCCTAGAAATGCAGGAACAGCTGCAGAA...GGAGAGCTCTGTTGTGTTTATTGTGCTTTTGCTGGGAAGTGATTGAGATGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
||
| 3UTR CAA 72 bp | TATTTTCCAAAACTTGTTCAAACTCTAAATCACAGCTaGATGTGCCAGCCCTGTAAGTTACCAGTGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFPKLVQTLNHS*MCQPCKLPVDG Trigger: ACCGTCCACTGGTAACTTACAGGGCTGGCACATCAAGCTGTGATTTAGAGTTTGAACAAGTTTTGGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR GCA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAACAGCATCCTTTCAAATaGTTCAACTCTGCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: WEIKLAIRPLFRISAKVKQHPFK*FNSALL Trigger: CAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTG...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CAA 72 bp | GTTAGTAAGAATCAGTTTTCAGCTAACCTGAACAGCTaGGGAAATCAAACTGGCCATCAGACCTTTATTCAG | + |
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Preference number: 4 (lower is better) Translates to: VSKNQFSANLNS*GNQTGHQTFIQ Trigger: CTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCAAGCTGTTCAGGTTAGCTGAAAACTGATTCTTACTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| 3UTR CAA 72 bp | GACCCAGCAGTAATGTCTGAAAACACTATGCCTAACTaGAGCTGTTGGAAAATATTATCTGACATCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: DPAVMSENTMPN*SCWKILSDIFL Trigger: CAAGAAGATGTCAGATAATATTTTCCAACAGCTCAAGTTAGGCATAGTGTTTTCAGACATTACTGCTGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS GCA 90 bp | GCACCAGGCCCTTCTCGCCCAGCGCGCTCAGACACTCGTAGGCCGTaGCCGACTGCAGGAAGAGCTGCGCCAGGCACATGCTCTCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: APGPSRPARSDTRRP*PTAGRAAPGTCSRC Trigger: GCAGCGAGAGCATGTGCCTGGCGCAGCTCTTCCTGCAGTCGGGCACGGCCTACGAGTGTCTGAGCGCGCTGGGCGAGAAGGGCCTGGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
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| CDS-3UTR CAA 90 bp | GCAGCAGCAGCAAGACCCCATAGGTGGTGTCCACACGCAGCCCCACGCGCATCATCTTCCATGCGGCTGTaGCCCTCTTCTATGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AAAARPHRWCPHAAPRASSSMRL*PSSMSW Trigger: CCAGGACATAGAAGAGGGCAACAGCCGCATGGAAGA...TGATGCGCGTGGGGCTGCGTGTGGACACCACCTATGGGGTCTTGCTGCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGCGTGCAGGAGCTCAAAGCCCTTTGCATGCCTCTACTGGCCACATCAACGGACTCGGCAGCTTaGCAGAGCACTTGCCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GGSVQELKALCMPLLATSTDSAA*QSTCRR Trigger: TCTGCGGCAAGTGCTCTGCAAAGCTGCCGAGTCCGT...TGATGTGGCCAGTAGAGGCATGCAAAGGGCTTTGAGCTCCTGCACGCTCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS TCA 90 bp | CAGGCCCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTTGCTaGATCAGGCCAGAAACGAATCCCAGCTTGGCGCCCAGCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QARHSILSNASTLPC*IRPETNPSLAPSRC Trigger: GCAGCGGCTGGGCGCCAAGCTGGGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS TCA 90 bp | CGGGAGGACTGGCCTCTCCTTCAGGCAGGGGAATATCAGCTCTGGTaGTTTCCTGCACCAGGTACACCAGTATTCGTTCGAGCTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: REDWPLLQAGEYQLW*FPAPGTPVFVRALH Trigger: GTGAAGAGCTCGAACGAATACTGGTGTACCTGGTGCAGGAAATCACCAGAGCTGATATTCCCCTGCCTGAAGGAGAGGCCAGTCCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
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| CDS-3UTR CAA 90 bp | AAGGAGTCTGTCCCAGGTCCTATGGAGGAGGGAGCGTGCAGGAGCTCAAAGCCCCATATCTTCTTAACCTaGTGGCCAATCTGCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: KESVPGPMEEGACRSSKPHIFLT*WPICSP Trigger: GGGAGAGCAGATTGGCCACAAGGTTAAGAAGATATG...GGGCTTTGAGCTCCTGCACGCTCCCTCCTCCATAGGACCTGGGACAGACTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | TGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGCGGGTCTTCTATGTCCTGGTaGCCCAGAAGAGACACCTCT | + |
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Preference number: 5 (lower is better) Translates to: CEHFGRTHIHSGAGSGSGSSMSW*PRRDTS Trigger: AGAGGTGTCTCTTCTGGGCAACCAGGACATAGAAGA...CCCGCTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | ATCCTGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGTCTTCCATGCGGCTGTaGCCCTCTTCTATGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ILRAFWENSHTFWSRQWESSMRL*PSSMSW Trigger: CCAGGACATAGAAGAGGGCAACAGCCGCATGGAAGA...CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS GCA 90 bp | CACAATGGTGTACCCTTTGCAGGCCCGCCACAGCATCCTTTCAAATaGTTCAACTCTGCCTTGCTGAATCAGGCCAGAAACGAATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: HNGVPFAGPPQHPFK*FNSALLNQARNESQ Trigger: CTGGGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTTGCTTCAACTCTGCCTaGCTGAATCAGGCCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: CYSPAEAQAVHASQHAALCFNSA*LNQARN Trigger: GTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCA...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | ATCCTGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGGCTATGAGGCACTTGTaGGTGACGTCAAAGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: ILRAFWENSHTFWSRQWEAMRHL*VTSKLH Trigger: GTGCAGCTTTGACGTCACCAACAAGTGCCTCATAGC...CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | ATCCTGCGAGCATTTTGGGAGAACTCACATACATTCTGGAGCAGGCAGTGGGAGTCAGCTATGAGGCACTaGTTGGTGACGTCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: ILRAFWENSHTFWSRQWESAMRH*LVTSKL Trigger: CAGCTTTGACGTCACCAACAAGTGCCTCATAGCTGA...CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | TGTTACTCTCCAGCTGAGGCACAAGCAGTCCATGCCTCTCAGCATGCAGCTCTTTTCATCTTGAAGGAGTaGAGGAACGTGAGGCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CYSPAEAQAVHASQHAALFILKE*RNVRRF Trigger: AAACCGCCTCACGTTCCTCAACTCCTTCAAGATGAA...AAGAGCTGCATGCTGAGAGGCATGGACTGCTTGTGCCTCAGCTGGAGAGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | CAGTACTCAATGGAGTGGATGGCCTGCGTCATCAGGATCTCCCCGAAGTTAAACTCTTCTATGTCCTGGTaGCCCAGAAGAGACACCTCT | + |
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Preference number: 5 (lower is better) Translates to: QYSMEWMACVIRISPKLNSSMSW*PRRDTS Trigger: AGAGGTGTCTCTTCTGGGCAACCAGGACATAGAAGA...GTTTAACTTCGGGGAGATCCTGATGACGCAGGCCATCCACTCCATTGAGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197161.2 |
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| CDS-3UTR CAA 90 bp | TACACTCCTGCAGACGGAGCAGTGGGCCTGAATGTCATTACACCCATGGCCAGCAAAAGAACTTACATTTaGATTGAGGTCTCGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: YTPADGAVGLNVITPMASKRTYI*IEVSEL Trigger: CAGTTCCGAGACCTCAATCAAAATGTAAGTTCTTTT...GCTGGCCATGGGTGTAATGACATTCAGGCCCACTGCTCCGTCTGCAGGAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | CCACACTCTACCACATGGTTCTGGAGGGCTGAGGCACCAAAAGGTCTCTGCAATACAGACATTTTCATCTaGAAGGAGTTGAGGAACGTG | + |
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Preference number: 5 (lower is better) Translates to: PHSTTWFWRAEAPKGLCNTDIFI*KELRNV Trigger: CACGTTCCTCAACTCCTTCAAGATGAAAATGTCTGT...ATTGCAGAGACCTTTTGGTGCCTCAGCCCTCCAGAACCATGTGGTAGAGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | AGCAGTCCATGCCTCTCAGCATGCAGCTCTTACAGGACCCAAGAAGCTGTGAAATCATCATTACTGAACTaGGAGGAGAGCAGACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSPCLSACSSYRTQEAVKSSLLN*EESRLK Trigger: CTTCAGTCTGCTCTCCTCCAAGTTCAGTAATGATGA...TTTCACAGCTTCTTGGGTCCTGTAAGAGCTGCATGCTGAGAGGCATGGACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | AGGGATTGTGTTCATGAACGAGGGGATTGTAGCTCCGCTCTCTCTCGAGCCTTCAAAAGAACTTACATTTaGATTGAGGTCTCGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: RDCVHERGDCSSALSRAFKRTYI*IEVSEL Trigger: CAGTTCCGAGACCTCAATCAAAATGTAAGTTCTTTT...GAAGGCTCGAGAGAGAGCGGAGCTACAATCCCCTCGTTCATGAACACAATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198382.5 |
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| CDS-3UTR CAA 90 bp | AGGCCTGCGTCGGTGGCATTAAATATCTTGAAGCATAGAGACCCATTCCAGAACAAACCTTCAGTGAATTaGTTGGTGCGGATCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: RPASVALNILKHRDPFQNKPSVN*LVRIRV Trigger: CACTCTGATCCGCACCAACAAATTCACTGAAGGTTT...GTTCTGGAATGGGTCTCTATGCTTCAAGATATTTAATGCCACCGACGCAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAAACAATGGTGTACCCTTaGCAGGCCCGCCACAGCATC | + |
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Preference number: 5 (lower is better) Translates to: WEIKLAIRPLFRISAKVKTMVYP*QARHSI Trigger: GATGCTGTGGCGGGCCTGCAAAGGGTACACCATTGT...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS TCA 90 bp | TCAAAGAACATCCTAAGGATCTCCTGTGACTGGCTTAGTCTGGGGTaGTTCTCATTTAACACCAGTAAGAGGGCAAACAGGAACATGACA | + |
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Preference number: 5 (lower is better) Translates to: SKNILRISCDWLSLG*FSFNTSKRANRNMT Trigger: TGTCATGTTCCTGTTTGCCCTCTTACTGGTGTTAAATGAGAATCACCCCAGACTAAGCCAGTCACAGGAGATCCTTAGGATGTTCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS-3UTR CAA 90 bp | TGGGAAATCAAACTGGCCATCAGACCTTTATTCAGAATTAGTGCCAAAGTAAAACCTTCAGTGAATTTGTaGGTGCGGATCAGAGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: WEIKLAIRPLFRISAKVKPSVNL*VRIRVG Trigger: CCCCACTCTGATCCGCACCAACAAATTCACTGAAGG...TTTTACTTTGGCACTAATTCTGAATAAAGGTCTGATGGCCAGTTTGATTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS CAA 90 bp | TTTGCAGGCCCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTaGCTGAATCAGGCCAGAAACGAATCCCAGCTTGGCGCCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: FAGPPQHPFKCFNSA*LNQARNESQLGAQP Trigger: CGGCTGGGCGCCAAGCTGGGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGGGCCTGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS TCA 72 bp | TGGCCTCTCCTTCAGGCAGGGGAATATCAGCTCTGGTaGTTTCCTGCACCAGGTACACCAGTATTCGTTCGA | + |
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Preference number: 6 (lower is better) Translates to: WPLLQAGEYQLW*FPAPGTPVFVR Trigger: TCGAACGAATACTGGTGTACCTGGTGCAGGAAATCACCAGAGCTGATATTCCCCTGCCTGAAGGAGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037865.13 ENSMUST00000198382.5 |
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| CDS TCA 72 bp | CACAGCATCCTTTCAAATGCTTCAACTCTGCCTTGCTaGATCAGGCCAGAAACGAATCCCAGCTTGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: HSILSNASTLPC*IRPETNPSLAP Trigger: GGGCGCCAAGCTGGGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS CAA 72 bp | CCGCCACAGCATCCTTTCAAATGCTTCAACTCTGCCTaGCTGAATCAGGCCAGAAACGAATCCCAGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PPQHPFKCFNSA*LNQARNESQLG Trigger: GCCAAGCTGGGATTCGTTTCTGGCCTGATTCAGCAAGGCAGAGTTGAAGCATTTGAAAGGATGCTGTGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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| CDS TCA 72 bp | ATCCTAAGGATCTCCTGTGACTGGCTTAGTCTGGGGTaGTTCTCATTTAACACCAGTAAGAGGGCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: ILRISCDWLSLG*FSFNTSKRANR Trigger: CCTGTTTGCCCTCTTACTGGTGTTAAATGAGAATCACCCCAGACTAAGCCAGTCACAGGAGATCCTTAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037865.13 |
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