Pregenerated sensors for ATP6AP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031007Ensembl transcript IDs: ENSMUST00000033313.3
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTAAGAAACCCAGTGCGTTCTCCAGCGCGAGTAACATGACTAAGTaGTTTACAGTTCTCTCAGTGCGTATTTCCACATGTATTAAATGG | + |
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Preference number: 1 (lower is better) Translates to: SKKPSAFSSASNMTK*FTVLSVRISTCIKW Trigger: CCATTTAATACATGTGGAAATACGCACTGAGAGAACTGTAAACCACTTAGTCATGTTACTCGCGCTGGAGAACGCACTGGGTTTCTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR-3UTR CCA 90 bp | CTAACAGCTGCACTACGTAGCCTGTGCAAGAAGTCAAGCATTTTAAGGTTCTCTAGTAACATGACTAAGTaGTTTACAGTTCTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LTAALRSLCKKSSILRFSSNMTK*FTVLSV Trigger: CACTGAGAGAACTGTAAACCACTTAGTCATGTTACT...AGAGAACCTTAAAATGCTTGACTTCTTGCACAGGCTACGTAGTGCAGCTGTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR-3UTR CCA 90 bp | CATGCTTCAAGATATCCCCCACAGATTTGTTTTTATGTACCTAATTACAAGCATCCAGAACTAAGCGATTaGATAAGCATATCCAGTATT | + |
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Preference number: 2 (lower is better) Translates to: HASRYPPQICFYVPNYKHPELSD*ISISSI Trigger: AATACTGGATATGCTTATCCAATCGCTTAGTTCTGG...ATGCTTGTAATTAGGTACATAAAAACAAATCTGTGGGGGATATCTTGAAGCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAACAGTAGCAATCATCCACTTCCATATAATAGTCTACAGATTGAAGCCATATTACAGTTCTCTCAGTaGGTATTTCCACATGTATTA | + |
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Preference number: 2 (lower is better) Translates to: MNSSNHPLPYNSLQIEAILQFSQ*VFPHVL Trigger: TAATACATGTGGAAATACGCACTGAGAGAACTGTAA...TATGGCTTCAATCTGTAGACTATTATATGGAAGTGGATGATTGCTACTGTTCAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR CCA 72 bp | CCCAGTGCGTTCTCCAGCGCGAGTAACATGACTAAGTaGTTTACAGTTCTCTCAGTGCGTATTTCCACATGT | + |
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Preference number: 3 (lower is better) Translates to: PSAFSSASNMTK*FTVLSVRISTC Trigger: ACATGTGGAAATACGCACTGAGAGAACTGTAAACCACTTAGTCATGTTACTCGCGCTGGAGAACGCACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR TCA 72 bp | CTAAGAAACCCAGTGCGTTCTCCAGCGCGAGTAACATaGCTAAGTGGTTTACAGTTCTCTCAGTGCGTATTT | + |
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Preference number: 3 (lower is better) Translates to: LRNPVRSPARVT*LSGLQFSQCVF Trigger: AAATACGCACTGAGAGAACTGTAAACCACTTAGTCATGTTACTCGCGCTGGAGAACGCACTGGGTTTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR-3UTR CAA 90 bp | TTAAAAACAGCTAGCTTGCTAGTCATATACACGTCCAGAACTAAGCGATTGGATCAATTACCAAACCTGTaGTCTAAGTCTAGCATAAGG | + |
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Preference number: 3 (lower is better) Translates to: LKTASLLVIYTSRTKRLDQLPNL*SKSSIR Trigger: CCTTATGCTAGACTTAGACAACAGGTTTGGTAATTG...ATCCAATCGCTTAGTTCTGGACGTGTATATGACTAGCAAGCTAGCTGTTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR-3UTR CAA 90 bp | ATGCTTCAAGATATCCCCCACAGATTTGTTTTTATGTACCTAATTACAAGCATCTCCAGAACTAAGCGATaGGATAAGCATATCCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: MLQDIPHRFVFMYLITSISRTKR*DKHIQY Trigger: ATACTGGATATGCTTATCCAATCGCTTAGTTCTGGA...GATGCTTGTAATTAGGTACATAAAAACAAATCTGTGGGGGATATCTTGAAGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR-3UTR CAA 90 bp | ATGCTTCAAGATATCCCCCACAGATTTGTTTTTATGTACCTAATTACAAGCATCTTAAAAACAGCTAGCTaGCTAGTCATATACACGTCC | + |
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Preference number: 3 (lower is better) Translates to: MLQDIPHRFVFMYLITSILKTAS*LVIYTS Trigger: GGACGTGTATATGACTAGCAAGCTAGCTGTTTTTAA...GATGCTTGTAATTAGGTACATAAAAACAAATCTGTGGGGGATATCTTGAAGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTAAGCGATTGGATAAGCATATCCAGTATTTTTGGGCTGCTCTTAGTTTACAGAGAAGCCCATaGACAGTGCAGCTACGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SRTKRLDKHIQYFWAALSLQRSP*TVQLRL Trigger: CAGACGTAGCTGCACTGTCCATGGGCTTCTCTGTAA...ACTAAGAGCAGCCCAAAAATACTGGATATGCTTATCCAATCGCTTAGTTCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR TCA 90 bp | CTAACAGCTGCACTACGTAGCCTGTGCAAGAAGTCAAGCATTTTAAGGTTCTCTTTGGCTAGATGCTTATaGCGAGACAACAAACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LTAALRSLCKKSSILRFSLARCL*RDNKLE Trigger: TTCCAGTTTGTTGTCTCGTCATAAGCATCTAGCCAA...AGAGAACCTTAAAATGCTTGACTTCTTGCACAGGCTACGTAGTGCAGCTGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR TCA 90 bp | ATCCACTTCCATATAATAGTCTACAGATTGAAGCCATACCACACACAAACCAAGCTCAAGGATGGTCCTTaGCTTCCTCACAAGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: IHFHIIVYRLKPYHTQTKLKDGP*LPHKGC Trigger: ACATCCCTTGTGAGGAAGTCAAGGACCATCCTTGAG...CTTGGTTTGTGTGTGGTATGGCTTCAATCTGTAGACTATTATATGGAAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR GCA 90 bp | TTAAAAACAGCTAGCTTGCTAGTCATATACACGTCCAGAACTAAGCGATTGGATTCGCTGGGAGCCAACTaGAAAACTACAGGTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKTASLLVIYTSRTKRLDSLGAN*KTTGVS Trigger: GGAAACACCTGTAGTTTTGCAGTTGGCTCCCAGCGA...ATCCAATCGCTTAGTTCTGGACGTGTATATGACTAGCAAGCTAGCTGTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR GCA 90 bp | ATGCTTCAAGATATCCCCCACAGATTTGTTTTTATGTACCTAATTACAAGCATCAGGCGGTTACGGAGCTaGCGCAATGTGACTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: MLQDIPHRFVFMYLITSIRRLRS*RNVTER Trigger: CCTTTCAGTCACATTGCGGCAGCTCCGTAACCGCCT...GATGCTTGTAATTAGGTACATAAAAACAAATCTGTGGGGGATATCTTGAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CCA 90 bp | ATCCACTTCCATATAATAGTCTACAGATTGAAGCCATACCACACACAAACCAAGCAGTGCAGCTACGTCTaGGATTCGATCTCCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: IHFHIIVYRLKPYHTQTKQCSYV*DSISWY Trigger: ATACCAGGAGATCGAATCCCAGACGTAGCTGCACTG...CTTGGTTTGTGTGTGGTATGGCTTCAATCTGTAGACTATTATATGGAAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR CAA 72 bp | AGCTTGCTAGTCATATACACGTCCAGAACTAAGCGATaGGATAAGCATATCCAGTATTTTTGGGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLLVIYTSRTKR*DKHIQYFWAAL Trigger: AAGAGCAGCCCAAAAATACTGGATATGCTTATCCAATCGCTTAGTTCTGGACGTGTATATGACTAGCAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR TCA 90 bp | CATGCTTCAAGATATCCCCCACAGATTTGTTTTTATGTACCTAATTACAAGCATAGAAGGGAGTTTTCTTaGAACAGGCGGTTACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HASRYPPQICFYVPNYKHRREFS*NRRLRS Trigger: GCTCCGTAACCGCCTGTTTCAAGAAAACTCCCTTCT...ATGCTTGTAATTAGGTACATAAAAACAAATCTGTGGGGGATATCTTGAAGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CCA 90 bp | TTGCACATGAACAGTAGCAATCATCCACTTCCATATAATAGTCTACAGATTGAAACACTCTCTCCTCGCTaGGAGCCAACTGCAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: LHMNSSNHPLPYNSLQIETLSPR*EPTAKL Trigger: TAGTTTTGCAGTTGGCTCCCAGCGAGGAGAGAGTGT...TTCAATCTGTAGACTATTATATGGAAGTGGATGATTGCTACTGTTCATGTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR TCA 90 bp | GTCCATTTGCACATGAACAGTAGCAATCATCCACTTCCATATAATAGTCTACAGAAATGTTGTAAGAGGTaGTTATCACAGCCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VHLHMNSSNHPLPYNSLQKCCKR*LSQPRP Trigger: TGGCCTTGGCTGTGATAATCACCTCTTACAACATTT...CTGTAGACTATTATATGGAAGTGGATGATTGCTACTGTTCATGTGCAAATGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CCA 90 bp | ATCCACTTCCATATAATAGTCTACAGATTGAAGCCATACCACACACAAACCAAGTCATCTGCAAACTTTTaGAGAGCATCAACAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: IHFHIIVYRLKPYHTQTKSSANF*RASTRI Trigger: GATCCTTGTTGATGCTCTCCAAAAGTTTGCAGATGA...CTTGGTTTGTGTGTGGTATGGCTTCAATCTGTAGACTATTATATGGAAGTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| 3UTR CAA 72 bp | GTAGCAATCATCCACTTCCATATAATAGTCTACAGATaGAAGCCATACCACACACAAACCAAGAGTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: VAIIHFHIIVYR*KPYHTQTKSNF Trigger: GAAGTTACTCTTGGTTTGTGTGTGGTATGGCTTCAATCTGTAGACTATTATATGGAAGTGGATGATTGCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR GCA 90 bp | TTGCACATGAACAGTAGCAATCATCCACTTCCATATAATAGTCTACAGATTGAATTCAAACACCGAGTTTaGTTTCCCCACCATATACAC | + |
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Preference number: 4 (lower is better) Translates to: LHMNSSNHPLPYNSLQIEFKHRV*FPHHIH Trigger: GTGTATATGGTGGGGAAAGCAAACTCGGTGTTTGAA...TTCAATCTGTAGACTATTATATGGAAGTGGATGATTGCTACTGTTCATGTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CCA 90 bp | GTCCATTTGCACATGAACAGTAGCAATCATCCACTTCCATATAATAGTCTACAGGACGAGACAACAAACTaGAAATATCATGTAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: VHLHMNSSNHPLPYNSLQDETTN*KYHVAL Trigger: AAGTGCTACATGATATTTCCAGTTTGTTGTCTCGTC...CTGTAGACTATTATATGGAAGTGGATGATTGCTACTGTTCATGTGCAAATGGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CAA 90 bp | TCCAGAACTAAGCGATTGGATAAGCATATCCAGTATTTTTGGGCTGCTCTTAGTGATGTGTCGAATGATTaGACAGTCACTAACTCTACC | + |
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Preference number: 5 (lower is better) Translates to: SRTKRLDKHIQYFWAALSDVSND*TVTNST Trigger: GGTAGAGTTAGTGACTGTCAAATCATTCGACACATC...ACTAAGAGCAGCCCAAAAATACTGGATATGCTTATCCAATCGCTTAGTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CAA 90 bp | GAACTAAGCGATTGGATAAGCATATCCAGTATTTTTGGGCTGCTCTTAGTTAACACTTTGGGTGTTCTCTaGTTTTGCCTCAAGGATGGT | + |
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Preference number: 5 (lower is better) Translates to: ELSDWISISSIFGLLLVNTLGVL*FCLKDG Trigger: ACCATCCTTGAGGCAAAACAAGAGAACACCCAAAGT...GTTAACTAAGAGCAGCCCAAAAATACTGGATATGCTTATCCAATCGCTTAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CAA 90 bp | TCCAGAACTAAGCGATTGGATAAGCATATCCAGTATTTTTGGGCTGCTCTTAGTAAGGTTATAGGGACTTaGGGTGTTCTCTTGTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SRTKRLDKHIQYFWAALSKVIGT*GVLLFC Trigger: GCAAAACAAGAGAACACCCAAAGTCCCTATAACCTT...ACTAAGAGCAGCCCAAAAATACTGGATATGCTTATCCAATCGCTTAGTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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| CDS-3UTR CAA 90 bp | ATGCTTCAAGATATCCCCCACAGATTTGTTTTTATGTACCTAATTACAAGCATCGTCATCTGCAAACTTTaGGAGAGCATCAACAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: MLQDIPHRFVFMYLITSIVICKL*ESINKD Trigger: ATCCTTGTTGATGCTCTCCAAAAGTTTGCAGATGAC...GATGCTTGTAATTAGGTACATAAAAACAAATCTGTGGGGGATATCTTGAAGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033313.3 |
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