Pregenerated sensors for ATP6AP1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078958Ensembl transcript IDs: ENSMUST00000109541.4, ENSMUST00000182104.2, ENSMUST00000182446.2, ENSMUST00000183162.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGATCAGAATAGCCGGTGAGAAGGAAGAGCTGCAGTCTCGGGCCTaGGCAAACTGTGCCCCCTTGATGGAGAAGCCTTGGATCTGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: PIRIAGEKEELQSRA*ANCAPLMEKPWIWK Trigger: TTTCCAGATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCTCTTCCTTCTCACCGGCTATTCTGATCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR GCA 90 bp | GGCCTCGGTGAGGGGACAGAAACTCGTGCTGTTAAATGTAGATTTTaGAGATCTGTTGGTTCCTTAGCTCATAGCATTCGGCTCCCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: GLGEGTETRAVKCRF*RSVGSLAHSIRLPG Trigger: GCCAGGGAGCCGAATGCTATGAGCTAAGGAACCAACAGATCTGCAAAATCTACATTTAACAGCACGAGTTTCTGTCCCCTCACCGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR GCA 90 bp | GCTGCAGTTAGAGTTGCCAGTGTCCACTGTAGTATTCTGACCAAGTaGTTCGTCTGTGAGGTCCAGCCACGTCTGATTCTTAAATTTAAC | + |
|
Preference number: 1 (lower is better) Translates to: AAVRVASVHCSILTK*FVCEVQPRLILKFN Trigger: GTTAAATTTAAGAATCAGACGTGGCTGGACCTCACAGACGAAGCACTTGGTCAGAATACTACAGTGGACACTGGCAACTCTAACTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR GCA 90 bp | GAACGTACTCCAGGGTTTGTTGCTCAGATTGTAGTTAAAAGTCTGTaGAATGGGTATCCTTGTGAAATTCTGTACTGGTTTCACCTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: ERTPGFVAQIVVKSL*NGYPCEILYWFHLS Trigger: GGAGAGGTGAAACCAGTACAGAATTTCACAAGGATACCCATTGCACAGACTTTTAACTACAATCTGAGCAACAAACCCTGGAGTACGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGAAGTTCCTTCTCCTCTCCTGTGTCCAACGCTCTCAGAGACGGGAAGTGGCTCAGAGACGGGAAGTaGTCAGGAGAGGTGATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PRSSFSSPVSNALRDGKWLRDGK*SGEVIN Trigger: GTTTATCACCTCTCCTGACCACTTCCCGTCTCTGAG...CCACTTCCCGTCTCTGAGAGCGTTGGACACAGGAGAGGAGAAGGAACTTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCTGTGTCCAACGCTCTCAGAGACGGGAAGTGGTCAGGAGAGGTGATAAACGATAGCGCAGGTAGATaGGCATATGCAACGCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPVSNALRDGKWSGEVINDSAGR*AYATHR Trigger: CCTATGCGTTGCATATGCTCATCTACCTGCGCTATC...GTTTATCACCTCTCCTGACCACTTCCCGTCTCTGAGAGCGTTGGACACAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGAGAGGGAATCCCGTCCCTaGAGAACTGAACAGGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SDITKENRVFRRWLGLGERESRP*RTEQGC Trigger: ACAACCCTGTTCAGTTCTCCAGGGACGGGATTCCCT...CTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTGGCCTCGGTGAGGGGACAGAAACTCGTGCTGTTAAATGTAGATTTTGCGATAGCGCAGGTAGATaGGCATATGCAACGCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: WLGLGEGTETRAVKCRFCDSAGR*AYATHR Trigger: CCTATGCGTTGCATATGCTCATCTACCTGCGCTATC...GCAAAATCTACATTTAACAGCACGAGTTTCTGTCCCCTCACCGAGGCCAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTCGGTGAGGGGACAGAAACTCGTGCTGTTAAATGTAGATTTTGCAGATCTGATAGCGCAGGTAGATaGGCATATGCAACGCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLGEGTETRAVKCRFCRSDSAGR*AYATHR Trigger: CCTATGCGTTGCATATGCTCATCTACCTGCGCTATC...AGATCTGCAAAATCTACATTTAACAGCACGAGTTTCTGTCCCCTCACCGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR CAA 90 bp | ACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTaGGCCTCGGTGAGGGGACAGAAACTCGTGCTGTTAAATGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TSQTSQKRTESFGDG*ASVRGQKLVLLNVD Trigger: ATCTACATTTAACAGCACGAGTTTCTGTCCCCTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR CAA 90 bp | AGAGCATATATACCGGTTGCGTTAAAAGTTGCTTGCACCGAATTGTaGAAGATTATCTCGACGCGGTGTAAACTAAACCAACTCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RAYIPVALKVACTEL*KIISTRCKLNQLWL Trigger: CAGCCAGAGTTGGTTTAGTTTACACCGCGTCGAGATAATCTTCAACAATTCGGTGCAAGCAACTTTTAACGCAACCGGTATATATGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR CAA 90 bp | GACAGAGCATATATACCGGTTGCGTTAAAAGTTGCTTGCACCGAATaGTTGAAGATTATCTCGACGCGGTGTAAACTAAACCAACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DRAYIPVALKVACTE*LKIISTRCKLNQLW Trigger: CCAGAGTTGGTTTAGTTTACACCGCGTCGAGATAATCTTCAACAATTCGGTGCAAGCAACTTTTAACGCAACCGGTATATATGCTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGATCTGGAAATCAATAAACGTGACCTCCCACAGGCTTGTCACATCATCTGAGGTAGTTAAAAGTCTGTaGAATGGGTATCCTTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: WIWKSINVTSHRLVTSSEVVKSL*NGYPCE Trigger: TTCACAAGGATACCCATTGCACAGACTTTTAACTAC...CTCAGATGATGTGACAAGCCTGTGGGAGGTCACGTTTATTGATTTCCAGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTGCAGTCTCGGGCCTGAGCAAACTGTGCCCCCTTGATGGAGAAGCCTTGCAGGCTGCTGACCCGTaGGCAGCGGTAGGAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RAAVSGLSKLCPLDGEALQAADP*AAVGVS Trigger: ACTTACTCCTACCGCTGCCAACGGGTCAGCAGCCTG...CAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR TCA 72 bp | ATAGCCGGTGAGAAGGAAGAGCTGCAGTCTCGGGCCTaGGCAAACTGTGCCCCCTTGATGGAGAAGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: IAGEKEELQSRA*ANCAPLMEKPW Trigger: CCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCTCTTCCTTCTCACCGGCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR GCA 72 bp | GTTGGTTCCTTAGCTCATAGCATTCGGCTCCCTGGCTaGCCAGAAGTTCCTTCTCCTCTCCTGTGTCCAACG | + |
|
Preference number: 3 (lower is better) Translates to: VGSLAHSIRLPG*PEVPSPLLCPT Trigger: CGTTGGACACAGGAGAGGAGAAGGAACTTCTGGGCAGCCAGGGAGCCGAATGCTATGAGCTAAGGAACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR GCA 72 bp | GAAGGAAGAGCTGCAGTCTCGGGCCTGAGCAAACTGTaGCCCCTTGATGGAGAAGCCTTGGATCTGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: EGRAAVSGLSKL*PLDGEALDLEI Trigger: GATTTCCAGATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCTCTTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR TCA 72 bp | CTGCAGTTAGAGTTGCCAGTGTCCACTGTAGTATTCTaGCCAAGTGCTTCGTCTGTGAGGTCCAGCCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: LQLELPVSTVVF*PSASSVRSSHV Trigger: GACGTGGCTGGACCTCACAGACGAAGCACTTGGTCAGAATACTACAGTGGACACTGGCAACTCTAACTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR TCA 72 bp | CAGGCTGCTGACCCGTTGGCAGCGGTAGGAGTAAGTTaGCAGAGCATATATACCGGTTGCGTTAAAAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QAADPLAAVGVS*QSIYTGCVKSC Trigger: GCAACTTTTAACGCAACCGGTATATATGCTCTGTCAACTTACTCCTACCGCTGCCAACGGGTCAGCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR CCA 72 bp | TCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATaGCTTGGCCTCGGTGAGGGGACAGAAACTCGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDITKENRVFRR*LGLGEGTETRA Trigger: AGCACGAGTTTCTGTCCCCTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| 3UTR GCA 72 bp | AGAGTTGCCAGTGTCCACTGTAGTATTCTGACCAAGTaGTTCGTCTGTGAGGTCCAGCCACGTCTGATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVASVHCSILTK*FVCEVQPRLIL Trigger: AAGAATCAGACGTGGCTGGACCTCACAGACGAAGCACTTGGTCAGAATACTACAGTGGACACTGGCAACTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR TCA 72 bp | AACTCTGGCTGGCCAGCTTGTTGTAATTGGTTAGGGTaGACCGTATGTCAATATCCTTGGGATCTTCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: NSGWPACCNWLG*TVCQYPWDLHH Trigger: ATGATGAAGATCCCAAGGATATTGACATACGGTTCACCCTAACCAATTACAACAAGCTGGCCAGCCAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| 3UTR GCA 72 bp | GAGGGGACAGAAACTCGTGCTGTTAAATGTAGATTTTaGAGATCTGTTGGTTCCTTAGCTCATAGCATTCGG | + |
|
Preference number: 3 (lower is better) Translates to: EGTETRAVKCRF*RSVGSLAHSIR Trigger: CCGAATGCTATGAGCTAAGGAACCAACAGATCTGCAAAATCTACATTTAACAGCACGAGTTTCTGTCCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182104.2 ENSMUST00000182446.2 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCCTTAGCTCATAGCATTCGGCTCCCTGGCTGCCCAGAAGTTCCTTCTCCTCTGCAGTCTCGGGCCTaGGCAAACTGTGCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLAHSIRLPGCPEVPSPLQSRA*ANCAPL Trigger: CAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAG...AGGAGAAGGAACTTCTGGGCAGCCAGGGAGCCGAATGCTATGAGCTAAGGAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | CAGATAGCGCAGGTAGATGAGCATATGCAACGCATAGGCCAGCACCAGCAACAGCTGCAGTCTCGGGCCTaGGCAAACTGTGCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QIAQVDEHMQRIGQHQQQLQSRA*ANCAPL Trigger: CAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAG...CTGTTGCTGGTGCTGGCCTATGCGTTGCATATGCTCATCTACCTGCGCTATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTCTCCTCTCCTGTGTCCAACGCTCTCAGAGACGGGAAGTGGTCAGGAGGTGAGAAGGAAGAGCTaGAGTCTCGGGCCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPSPLLCPTLSETGSGQEVRRKS*SLGPEQ Trigger: TTGCTCAGGCCCGAGACTGCAGCTCTTCCTTCTCAC...CTCCTGACCACTTCCCGTCTCTGAGAGCGTTGGACACAGGAGAGGAGAAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCTCCGCCGCAGGCTGCTaGCCCGTTGGCAGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGSAAGC*PVGSGR Trigger: CCTACCGCTGCCAACGGGTCAGCAGCCTGCGGCGGA...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR TCA 90 bp | TTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCCTGCAGTCTCGGGCCTaGGCAAACTGTGCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSQTSQKRTESFGDGLALQSRA*ANCAPL Trigger: CAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAG...GGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGAGGGCCTGAGCAAACTGTaGCCCCTTGATGGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDITKENRVFRRWLGLGEGLSKL*PLDGEA Trigger: GGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCC...CTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR GCA 90 bp | GGAGATGGCTTGGCCTCGGTGAGGGGACAGAAACTCGTGCTGTTAAATGTAGATGTGAGAAGGAAGAGCTaGAGTCTCGGGCCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDGLASVRGQKLVLLNVDVRRKS*SLGPEQ Trigger: TTGCTCAGGCCCGAGACTGCAGCTCTTCCTTCTCAC...ATCTACATTTAACAGCACGAGTTTCTGTCCCCTCACCGAGGCCAAGCCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGGTGAGAAGGAAGAGCTaGAGTCTCGGGCCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVRHHKREQSLSEMAWPRVRRKS*SLGPEQ Trigger: TTGCTCAGGCCCGAGACTGCAGCTCTTCCTTCTCAC...CCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGAAGTTCCTTCTCCTCTCCTGTGTCCAACGCTCTCAGAGACGGGAAGTGGAGGTCCAGCCACGTCTaGTTCTTAAATTTAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSSFSSPVSNALRDGKWRSSHV*FLNLTV Trigger: CACAGTTAAATTTAAGAATCAGACGTGGCTGGACCT...CCACTTCCCGTCTCTGAGAGCGTTGGACACAGGAGAGGAGAAGGAACTTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGGATCAGAATAGCCGGTaGGAAGGAAGAGCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQTSQKRTESFGDGLASVDQNSR*EGRAAV Trigger: GACTGCAGCTCTTCCTTCTCACCGGCTATTCTGATC...CACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR TCA 90 bp | CAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGGATAGCGCAGGTAGATaGGCATATGCAACGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVRHHKREQSLSEMAWPRDSAGR*AYATHR Trigger: CCTATGCGTTGCATATGCTCATCTACCTGCGCTATC...CCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CCA 90 bp | TTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCCTCAGAGACGGGAAGTaGTCAGGAGAGGTGATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTSQTSQKRTESFGDGLALRDGK*SGEVIN Trigger: GTTTATCACCTCTCCTGACCACTTCCCGTCTCTGAG...GGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR TCA 90 bp | AGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGTCTCCACTATTCTTTTaGCCATTCCGTACAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SQTSQKRTESFGDGLASVSPLFF*PFRTTT Trigger: AGTGGTTGTACGGAATGGTCAAAAGAATAGTGGAGA...CACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATAAACTCATAATGACGGTCCAGATAGCGCAGGTAGATGAGCATATGCAATTGATGGAGAAGCCTTaGATGTGGCACTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GDKLIMTVQIAQVDEHMQLMEKP*MWHFPR Trigger: GCGAGGAAAGTGCCACATCCAAGGCTTCTCCATCAA...TTGCATATGCTCATCTACCTGCGCTATCTGGACCGTCATTATGAGTTTATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182104.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGAACCTACATTCTTCCTaGCAAGTATCTGATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVRHHKREQSLSEMAWPRNLHSS*QVSDPN Trigger: GTTTGGATCAGATACTTGCCAGGAAGAATGTAGGTT...CCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CCA 90 bp | TCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGAGCAACCACTTCTTTACTaGAAGACTCTTGAGAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: SDITKENRVFRRWLGLGEQPLLY*KTLENL Trigger: TAGGTTCTCAAGAGTCTTCCAGTAAAGAAGTGGTTG...CTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR TCA 90 bp | TTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTTCCTGGCAAGTATCTaGTCCAAACTGACTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTSQTSQKRTESFGDGLAFLASI*SKLTEN Trigger: GTTTTCAGTCAGTTTGGATCAGATACTTGCCAGGAA...GGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000182446.2 |
||
| CDS-3UTR TCA 90 bp | TTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTTACTGGAAGACTCTTaGGAACCTACATTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSQTSQKRTESFGDGLALLEDS*EPTFFL Trigger: CAGGAAGAATGTAGGTTCTCAAGAGTCTTCCAGTAA...GGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR GCA 90 bp | AGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGGTAGTTAAAAGTCTGTaGAATGGGTATCCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQTSQKRTESFGDGLASVVVKSL*NGYPCE Trigger: TTCACAAGGATACCCATTGCACAGACTTTTAACTAC...CACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGAGGTAGTTAAAAGTCTGTaGAATGGGTATCCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDITKENRVFRRWLGLGEVVKSL*NGYPCE Trigger: TTCACAAGGATACCCATTGCACAGACTTTTAACTAC...CTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTTGATGGAGAAGCCTTaGATCTGGAAATCAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVRHHKREQSLSEMAWPRLMEKP*IWKSIN Trigger: GTTTATTGATTTCCAGATCCAAGGCTTCTCCATCAA...CCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR TCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCTTCCTGGCAAGTATCTaGTCCAAACTGACTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGFLASI*SKLTEN Trigger: GTTTTCAGTCAGTTTGGATCAGATACTTGCCAGGAA...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000182446.2 |
||
| CDS-3UTR TCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCTCTCCACTATTCTTTTaGCCATTCCGTACAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGSPLFF*PFRTTT Trigger: AGTGGTTGTACGGAATGGTCAAAAGAATAGTGGAGA...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCAGGTCCAGCCACGTCTaGTTCTTAAATTTAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGRSSHV*FLNLTV Trigger: CACAGTTAAATTTAAGAATCAGACGTGGCTGGACCT...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGATAAACTCATAATGACGGTCCAGATAGCGCAGGTAGATGAGCATATGAGGTCCAGCCACGTCTaGTTCTTAAATTTAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGDKLIMTVQIAQVDEHMRSSHV*FLNLTV Trigger: CACAGTTAAATTTAAGAATCAGACGTGGCTGGACCT...CATATGCTCATCTACCTGCGCTATCTGGACCGTCATTATGAGTTTATCACCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGTGAGGGGACAGAAACTCGTGCTGTTAAATGTAGATTTTGCAGATCTGTGTGAAATTCTGTACTaGTTTCACCTCTCCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: ASVRGQKLVLLNVDFADLCEILY*FHLSTI Trigger: AATAGTGGAGAGGTGAAACCAGTACAGAATTTCACA...CAGATCTGCAAAATCTACATTTAACAGCACGAGTTTCTGTCCCCTCACCGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183162.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTGCTTCGTCTGTGAGGTCCAGCCACGTCTGATTCTTAAATTTAACTGTACCCTACATTCTTCCTaGCAAGTATCTGATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKCFVCEVQPRLILKFNCTLHSS*QVSDPN Trigger: GTTTGGATCAGATACTTGCCAGGAAGAATGTAGGGT...ACAGTTAAATTTAAGAATCAGACGTGGCTGGACCTCACAGACGAAGCACTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| CDS-3UTR GCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCAGCATATATACCGGTTaGGTTAAAAGTTGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGSIYTG*VKSCLH Trigger: GTGCAAGCAACTTTTAACGCAACCGGTATATATGCT...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| 3UTR CAA 72 bp | ATACCGGTTGCGTTAAAAGTTGCTTGCACCGAATTGTaGAAGATTATCTCGACGCGGTGTAAACTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPVALKVACTEL*KIISTRCKLNQ Trigger: TTGGTTTAGTTTACACCGCGTCGAGATAATCTTCAACAATTCGGTGCAAGCAACTTTTAACGCAACCGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| CDS-3UTR GCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCGCGTTAAAAGTTGCTTaGACCGAATTGTTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGALKVA*TELLKI Trigger: AATCTTCAACAATTCGGTGCAAGCAACTTTTAACGC...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CCA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCTGTGAAATTCTGTACTaGTTTCACCTCTCCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: IHKSDITKENRVFRRWLGCEILY*FHLSTI Trigger: AATAGTGGAGAGGTGAAACCAGTACAGAATTTCACA...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS-3UTR CAA 90 bp | TTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCCAGGCTGCTGACCCGTaGGCAGCGGTAGGAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FTSQTSQKRTESFGDGLAQAADP*AAVGVS Trigger: ACTTACTCCTACCGCTGCCAACGGGTCAGCAGCCTG...GGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CAA 90 bp | CAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTCGCTGCAGTTAGAGTaGCCAGTGTCCACTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVRHHKREQSLSEMAWPRSLQLE*PVSTVV Trigger: TACTACAGTGGACACTGGCAACTCTAACTGCAGCGA...CCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGTCGCTGCAGTTAGAGTaGCCAGTGTCCACTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQTSQKRTESFGDGLASVSLQLE*PVSTVV Trigger: TACTACAGTGGACACTGGCAACTCTAACTGCAGCGA...CACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109541.4 ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGAGAGCGGTAGGAGTAAGTaGACAGAGCATATATACCGG | + |
|
Preference number: 5 (lower is better) Translates to: SDITKENRVFRRWLGLGESGRSK*TEHIYR Trigger: CCGGTATATATGCTCTGTCAACTTACTCCTACCGCT...CTCACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGATAAACTCATAATGACGGTCCAGATAGCGCAGGTAGATGAGCATATGTCGCTGCAGTTAGAGTaGCCAGTGTCCACTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGDKLIMTVQIAQVDEHMSLQLE*PVSTVV Trigger: TACTACAGTGGACACTGGCAACTCTAACTGCAGCGA...CATATGCTCATCTACCTGCGCTATCTGGACCGTCATTATGAGTTTATCACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182104.2 ENSMUST00000183162.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTCGGTGTTTACTGGAAGACTCTaGAGAACCTACATTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQTSQKRTESFGDGLASVFTGRL*RTYILP Trigger: AGGAAGAATGTAGGTTCTCAAGAGTCTTCCAGTAAA...CACCGAGGCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CAA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCGTATGTCAATATCCTaGGGATCTTCATCATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: IHKSDITKENRVFRRWLGRMSIS*GSSSSP Trigger: TGGTGATGATGAAGATCCCAAGGATATTGACATACG...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS CCA 90 bp | CCTCTCCACTATTCTTTTGACCATTCCGTACAACCACTTCTTTACTaGAAGACTCTTGAGAACCTACATTCTTCCTGGCAAGTATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLHYSFDHSVQPLLY*KTLENLHSSWQVSD Trigger: ATCAGATACTTGCCAGGAAGAATGTAGGTTCTCAAGAGTCTTCCAGTAAAGAAGTGGTTGTACGGAATGGTCAAAAGAATAGTGGAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS-3UTR CAA 90 bp | ATTCACAAGTCAGACATCACAAAAGAGAACAGAGTCTTTCGGAGATGGCTTGGCCTTGATGGAGAAGCCTaGGATCTGGAAATCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: IHKSDITKENRVFRRWLGLDGEA*DLEINK Trigger: TTTATTGATTTCCAGATCCAAGGCTTCTCCATCAAG...GCCAAGCCATCTCCGAAAGACTCTGTTCTCTTTTGTGATGTCTGACTTGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS CCA 90 bp | GTAGTTAAAAGTCTGTGCAATGGGTATCCTTGTGAAATTCTGTACTaGTTTCACCTCTCCACTATTCTTTTGACCATTCCGTACAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVKSLCNGYPCEILY*FHLSTILLTIPYNH Trigger: GTGGTTGTACGGAATGGTCAAAAGAATAGTGGAGAGGTGAAACCAGTACAGAATTTCACAAGGATACCCATTGCACAGACTTTTAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS CAA 90 bp | GCAGTCTCGGGCCTGAGCAAACTGTGCCCCCTTGATGGAGAAGCCTaGGATGTGGCACTTTCCTCGCTGCAGTTAGAGTTGCCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVSGLSKLCPLDGEA*DVALSSLQLELPVS Trigger: GGACACTGGCAACTCTAACTGCAGCGAGGAAAGTGCCACATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182104.2 |
||
| CDS TCA 72 bp | AGCTGCAGTCTCGGGCCTGAGCAAACTGTGCCCCCTTaGTGGAGAAGCCTTGGATGTGGCACTTTCCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCSLGPEQTVPP*WRSLGCGTFLA Trigger: AGCGAGGAAAGTGCCACATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182104.2 |
||
| CDS GCA 72 bp | GAAGGAAGAGCTGCAGTCTCGGGCCTGAGCAAACTGTaGCCCCTTGATGGAGAAGCCTTGGATGTGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: EGRAAVSGLSKL*PLDGEALDVAL Trigger: AAGTGCCACATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCTCTTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182104.2 |
||
| CDS GCA 72 bp | GAAGGAAGAGCTGCAGTCTCGGGCCTGAGCAAACTGTaGCCCCTTGATGGAGAAGCCTTGGATCGTATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EGRAAVSGLSKL*PLDGEALDRMS Trigger: TGACATACGATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGCAGCTCTTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183162.8 |
||
| CDS CAA 72 bp | GGCCTGAGCAAACTGTGCCCCCTTGATGGAGAAGCCTaGGATGTGGCACTTTCCTCGCTGCAGTTAGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLSKLCPLDGEA*DVALSSLQLEL Trigger: CAACTCTAACTGCAGCGAGGAAAGTGCCACATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182104.2 |
||
| CDS CAA 90 bp | GCAGTCTCGGGCCTGAGCAAACTGTGCCCCCTTGATGGAGAAGCCTaGGATCGTATGTCAATATCCTTGGGATCTTCATCATCACCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AVSGLSKLCPLDGEA*DRMSISLGSSSSPN Trigger: GTTTGGTGATGATGAAGATCCCAAGGATATTGACATACGATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCCCGAGACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183162.8 |
||
| CDS CAA 72 bp | GGCCTGAGCAAACTGTGCCCCCTTGATGGAGAAGCCTaGGATCGTATGTCAATATCCTTGGGATCTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GLSKLCPLDGEA*DRMSISLGSSS Trigger: TGATGAAGATCCCAAGGATATTGACATACGATCCAAGGCTTCTCCATCAAGGGGGCACAGTTTGCTCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183162.8 |
||
| CDS CCA 72 bp | AGTCTGTGCAATGGGTATCCTTGTGAAATTCTGTACTaGTTTCACCTCTCCACTATTCTTTTGACCATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLCNGYPCEILY*FHLSTILLTIP Trigger: CGGAATGGTCAAAAGAATAGTGGAGAGGTGAAACCAGTACAGAATTTCACAAGGATACCCATTGCACAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109541.4 ENSMUST00000183162.8 |
||
| CDS CAA 72 bp | ACCATTCCGTACAACCACTTCTTTACTGGAAGACTCTaGAGAACCTACATTCTTCCTGGCAAGTATCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: TIPYNHFFTGRL*RTYILPGKYLI Trigger: GATCAGATACTTGCCAGGAAGAATGTAGGTTCTCAAGAGTCTTCCAGTAAAGAAGTGGTTGTACGGAATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS CAA 90 bp | TATCCTTGTGAAATTCTGTACTGGTTTCACCTCTCCACTATTCTTTaGACCATTCCGTACAACCACTTCTTTACTGGAAGACTCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: YPCEILYWFHLSTIL*TIPYNHFFTGRLLR Trigger: TCTCAAGAGTCTTCCAGTAAAGAAGTGGTTGTACGGAATGGTCAAAAGAATAGTGGAGAGGTGAAACCAGTACAGAATTTCACAAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS CCA 72 bp | TTGATGGAGAAGCCTTGGATCGTATGTCAATATCCTTaGGATCTTCATCATCACCAAACTTTAAAGACAACG | + |
|
Preference number: 6 (lower is better) Translates to: LMEKPWIVCQYP*DLHHHQTLKTT Trigger: CGTTGTCTTTAAAGTTTGGTGATGATGAAGATCCCAAGGATATTGACATACGATCCAAGGCTTCTCCATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183162.8 |
||
| CDS CAA 72 bp | CTTGATGGAGAAGCCTTGGATCGTATGTCAATATCCTaGGGATCTTCATCATCACCAAACTTTAAAGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: LDGEALDRMSIS*GSSSSPNFKDN Trigger: GTTGTCTTTAAAGTTTGGTGATGATGAAGATCCCAAGGATATTGACATACGATCCAAGGCTTCTCCATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183162.8 |
||
| CDS TCA 72 bp | ACCCTACATTCTTCCTGGCAAGTATCTGATCCAAACTaGCTGAAAACACCATACATAAGAACAAAAGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLHSSWQVSDPN*LKTPYIRTKVR Trigger: TCTCACTTTTGTTCTTATGTATGGTGTTTTCAGTCAGTTTGGATCAGATACTTGCCAGGAAGAATGTAGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||
| CDS TCA 72 bp | AACCTACATTCTTCCTGGCAAGTATCTGATCCAAACTaGCTGAAAACACCATACATAAGAACAAAAGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLHSSWQVSDPN*LKTPYIRTKVR Trigger: TCTCACTTTTGTTCTTATGTATGGTGTTTTCAGTCAGTTTGGATCAGATACTTGCCAGGAAGAATGTAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109541.4 |
||
| CDS TCA 72 bp | TATTCTTTTGACCCTACATTCTTCCTGGCAAGTATCTaGTCCAAACTGACTGAAAACACCATACATAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YSFDPTFFLASI*SKLTENTIHKN Trigger: GTTCTTATGTATGGTGTTTTCAGTCAGTTTGGATCAGATACTTGCCAGGAAGAATGTAGGGTCAAAAGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182446.2 |
||