Pregenerated sensors for ATP6AP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019087Ensembl transcript IDs: ENSMUST00000019231.12, ENSMUST00000114171.10, ENSMUST00000124797.8, ENSMUST00000136056.2, ENSMUST00000147275.8, ENSMUST00000147900.8, ENSMUST00000154630.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCAGAGTGCTGATTGCATACCAGTCCACAGCAGGAAGCACCAGTaGGGAGGGGGCCAAGTCCAGGGCATTCTCCAGGTTAGAAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GQSADCIPVHSRKHQ*GGGQVQGILQVRKG Trigger: GCCTTTTCTAACCTGGAGAATGCCCTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCTGTGGACTGGTATGCAATCAGCACTCTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR GCA 90 bp | CCCAGCCACCATGGTTATATCACGGGCCACTCTAGAAGGGCGGACTaGAGTAAGAGCTGCGGTGTAAGGGACATCTTCAGACTTGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: PSHHGYITGHSRRAD*SKSCGVRDIFRLEC Trigger: ACACTCAAGTCTGAAGATGTCCCTTACACCGCAGCTCTTACTGCAGTCCGCCCTTCTAGAGTGGCCCGTGATATAACCATGGTGGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR GCA 90 bp | GGTTATATCACGGGCCACTCTAGAAGGGCGGACTGCAGTAAGAGCTaGGGTGTAAGGGACATCTTCAGACTTGAGTGTGCTCAGTACCTG | + |
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Preference number: 1 (lower is better) Translates to: GYITGHSRRADCSKS*GVRDIFRLECAQYL Trigger: CAGGTACTGAGCACACTCAAGTCTGAAGATGTCCCTTACACCGCAGCTCTTACTGCAGTCCGCCCTTCTAGAGTGGCCCGTGATATAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR GCA 90 bp | GGGGCCAAGTCCAGGGCATTCTCCAGGTTAGAAAAGGCACTGTCCTaGTTATTTCCAAACACACCACCGTATGCTGTGAAATCCTCAATG | + |
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Preference number: 1 (lower is better) Translates to: GAKSRAFSRLEKALS*LFPNTPPYAVKSSM Trigger: CATTGAGGATTTCACAGCATACGGTGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTTCTAACCTGGAGAATGCCCTGGACTTGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR CCA 90 bp | GGTGTATGTCACACAATCTGGGTCAAAGTGATGGTGGGGCCCTTGTaGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGTATCATGTGC | + |
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Preference number: 1 (lower is better) Translates to: GVCHTIWVKVMVGPL*SSKRSMVFRLSIMC Trigger: GCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACATACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| 3UTR CCA 90 bp | ACACCAATACTCCCTCAATTCCTCTCAGGTGTATGTCACACAATCTaGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGATCC | + |
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Preference number: 1 (lower is better) Translates to: TPILPQFLSGVCHTI*VKVMVGPLWSSKRS Trigger: GGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACATACACCTGAGAGGAATTGAGGGAGTATTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| 3UTR TCA 90 bp | TCCCTCAATTCCTCTCAGGTGTATGTCACACAATCTGGGTCAAAGTaGTGGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: SLNSSQVYVTQSGSK*WWGPCGHQSDPWSL Trigger: TAAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACATACACCTGAGAGGAATTGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| 3UTR CCA 90 bp | GTCTTTGTATGCCACAGAGAAGTTTTGTGCCCAAAACAGGATCCTTaGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VFVCHREVLCPKQDP*GSVIVTHRRMDRRR Trigger: TCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCATACAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
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| 3UTR GCA 90 bp | CTTTCCACACCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTaGTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACACA | + |
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Preference number: 1 (lower is better) Translates to: LSTPRKFKEPQVHGC*WKLHKAWGVSIYYT Trigger: TGTGTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGGTGTGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR CCA 90 bp | GTGGATTTCAAGTCGTTCCATGGCAAACCAATATCGGGCAGACACTaGATAGAAGCGACTAGCCAGAATGAACTTGAATGTCACTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: VDFKSFHGKPISGRH*IEATSQNELECHCC Trigger: GCAACAGTGACATTCAAGTTCATTCTGGCTAGTCGCTTCTATCCAGTGTCTGCCCGATATTGGTTTGCCATGGAACGACTTGAAATCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
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| 3UTR TCA 90 bp | AAAAGGCACTGTCCTGCTTATTTCCAAACACACCACCGTATGCTGTaGAATCCTCAATGCTTAGCTGTTATTTACCATCTTCTGAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: KRHCPAYFQTHHRML*NPQCLAVIYHLLKG Trigger: TCCTTTCAGAAGATGGTAAATAACAGCTAAGCATTGAGGATTTCACAGCATACGGTGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGAGCAGGAAGCACCAGTaGGGAGGGGGCCAAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WGSVIVTHRRMDRRRCHLSRKHQ*GGGQVQ Trigger: CTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCT...CAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTCATCGTTACCTGTGAGGACCTCCCTGGGCGCCATCAGACCGGAGCTGGCTAGGTGGTCAGAGTGCTaGTTGCATACCAGTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: TSSLPVRTSLGAIRPELARWSEC*LHTSPQ Trigger: CTGTGGACTGGTATGCAATCAGCACTCTGACCACCT...AGCCAGCTCCGGTCTGATGGCGCCCAGGGAGGTCCTCACAGGTAACGATGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGTATCATGTGCCAATCTGGGTCAAAGTaGTGGTGGGGCCCTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GPLWSSKRSMVFRLSIMCQSGSK*WWGPCG Trigger: ACCACAAGGGCCCCACCATCACTTTGACCCAGATTG...GCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTCAATCTGGGTCAAAGTaGTGGTGGGGCCCTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: WVKVMVGPLWSSKRSMVFQSGSK*WWGPCG Trigger: ACCACAAGGGCCCCACCATCACTTTGACCCAGATTG...AAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGGGACATCTTCAGACTTaGGTGTGCTCAGTACCTGTC | + |
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Preference number: 2 (lower is better) Translates to: WGSVIVTHRRMDRRRCHLGHLQT*VCSVPV Trigger: GACAGGTACTGAGCACACTCAAGTCTGAAGATGTCC...CAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGAGTCTGGTAGCTAGATCCACATaGAAGGGGCTAGCCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVIVTHRRMDRRRCHLSLVARST*KGLAPS Trigger: GCTTGGGGCTAGCCCCTTGCATGTGGATCTAGCTAC...CAGACTCAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGGACTGCAGTAAGAGCTaGGGTGTAAGGGACATCTTC | + |
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Preference number: 2 (lower is better) Translates to: WGSVIVTHRRMDRRRCHLDCSKS*GVRDIF Trigger: GAAGATGTCCCTTACACCGCAGCTCTTACTGCAGTC...CAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTTGAGTGTGCTCAGTACCTGTCCGATGACCTCATCGTTACCTGTGAGGACCAGGAAGGCTGGCATTaGGCTTCAGCTCCTTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: RLECAQYLSDDLIVTCEDQEGWH*ASAPLR Trigger: CCTTAAAGGAGCTGAAGCTCAATGCCAGCCTTCCTG...GTCCTCACAGGTAACGATGAGGTCATCGGACAGGTACTGAGCACACTCAAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGTATCATGTGCGTTCACCAGTCACATTaGAGGCCTGGATCTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPLWSSKRSMVFRLSIMCVHQSH*RPGSRR Trigger: TCTCCTAGATCCAGGCCTTCAATGTGACTGGTGAAC...GCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCAGAAGGAGCCGGTCAAGTTAAGATTCTCCACACCAAAGGTGAGGGAGGTATGGATCGCAGGAGATaGCACCTGAGTCTGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IPEGAGQVKILHTKGEGGMDRRR*HLSLKQ Trigger: CTGCTTCAGACTCAGGTGGCATCTCCTGCGATCCAT...ACCTCCCTCACCTTTGGTGTGGAGAATCTTAACTTGACCGGCTCCTTCTGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACAGAGAAGTTTTGTaGCCAAAACAGGATCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: DPWGSVIVTHRRMDRRRCHREVL*PKQDPW Trigger: CCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTG...GCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCAGACTTGAGTGTGCTCAGTACCTGTCCGATGACCTCATCGTTACCTGTGGTCAGAGTGCTGATTaGATACCAGTCCACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: IFRLECAQYLSDDLIVTCGQSAD*IPVHSR Trigger: CCTGCTGTGGACTGGTATGCAATCAGCACTCTGACC...ACAGGTAACGATGAGGTCATCGGACAGGTACTGAGCACACTCAAGTCTGAAGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR GCA 90 bp | AAACAGGATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGCACAGAGAAGTTTTGTaGCCAAAACAGGATCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: KQDPWGSVIVTHRRMDRRHREVL*PKQDPW Trigger: CCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTG...CCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTGGAGACACATTGACATaGATCAGATGGTTCCACAAG | + |
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Preference number: 2 (lower is better) Translates to: WVKVMVGPLWSSKRSMVFGDTLT*IRWFHK Trigger: CTTGTGGAACCATCTGATCCATGTCAATGTGTCTCC...AAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
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| 3UTR CAA 90 bp | GGAGGTCAAGTCTTTCCACTCGTCTTTGTATGCCACAGAGAAGTTTaGTGCCCAAAACAGGATCCTTGGGGCAGTGTCATTGTAACTCAC | + |
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Preference number: 2 (lower is better) Translates to: GGQVFPLVFVCHREV*CPKQDPWGSVIVTH Trigger: GTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCATACAAAGACGAGTGGAAAGACTTGACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGCCCAAAACAGGATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATCACCACCGTATGCTGTaGAATCCTCAATGCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: FVPKTGSLGQCHCNSQEDHHRML*NPQCLA Trigger: AGCTAAGCATTGAGGATTTCACAGCATACGGTGGTG...ATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGAGTCTGAAACACACCACCGTATaGTGTGAAATCCTCAATGCT | + |
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Preference number: 2 (lower is better) Translates to: SVIVTHRRMDRRRCHLSLKHTTV*CEILNA Trigger: AGCATTGAGGATTTCACAGCATACGGTGGTGTGTTT...CAGACTCAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACGTATGTCACACAATCTaGGTCAAAGTGATGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYVCHTI*VKVMVG Trigger: CCCCACCATCACTTTGACCCAGATTGTGTGACATAC...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGTATCATGTGCAGACCATAGGTGAATATGAAAAGCATGAAGAGGGTGGTCCATGGTCTTTAGGCTaGGTATCATGTGCAGACCAT | + |
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Preference number: 2 (lower is better) Translates to: AEYHVQTIGEYEKHEEGGPWSLG*VSCADH Trigger: ATGGTCTGCACATGATACTCAGCCTAAAGACCATGG...ACCACCCTCTTCATGCTTTTCATATTCACCTATGGTCTGCACATGATACTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAAAACAGGATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATTTATTTACCATCTTCTaGAAGGACTATCAACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CPKQDPWGSVIVTHRRMDLFTIF*KDYQPA Trigger: TGCTGGTTGATAGTCCTTTCAGAAGATGGTAAATAA...ATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTACTACACAAAAGCACTATAAACAGCAAGGAATAATAGCAGAGGGGCAAGGAACCTCAAGTTCATaGCTGTTGCTGGAAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AFTTQKHYKQQGIIAEGQGTSSS*LLLEAP Trigger: TGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCC...TTGCCCCTCTGCTATTATTCCTTGCTGTTTATAGTGCTTTTGTGTAGTAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCACACAAAACAGAAACATaGCAACCTAGACACCAATAC | + |
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Preference number: 2 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSHKTET*QPRHQY Trigger: GTATTGGTGTCTAGGTTGTCATGTTTCTGTTTTGTG...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR-3UTR GCA 90 bp | GACACGAAGCCCAACACAAGGCAACACGTCTTTATTTTATTAGGAAGGAAACAACAAGTTCATGGCTGTTaGTGGAAGCTCCATAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: DTKPNTRQHVFILLGRKQQVHGC*WKLHKA Trigger: AGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTG...TTGTTTCCTTCCTAATAAAATAAAGACGTGTTGCCTTGTGTTGGGCTTCGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
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| 3UTR-3UTR TCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGACACAAAACAGAAACATaGCAACCTAGACACCAATAC | + |
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Preference number: 2 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGHKTET*QPRHQY Trigger: GTATTGGTGTCTAGGTTGTCATGTTTCTGTTTTGTG...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR TCA 72 bp | GCTGATTGCATACCAGTCCACAGCAGGAAGCACCAGTaGGGAGGGGGCCAAGTCCAGGGCATTCTCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: ADCIPVHSRKHQ*GGGQVQGILQV Trigger: AACCTGGAGAATGCCCTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCTGTGGACTGGTATGCAATCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR GCA 72 bp | CATGGTTATATCACGGGCCACTCTAGAAGGGCGGACTaGAGTAAGAGCTGCGGTGTAAGGGACATCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: HGYITGHSRRAD*SKSCGVRDIFR Trigger: TCTGAAGATGTCCCTTACACCGCAGCTCTTACTGCAGTCCGCCCTTCTAGAGTGGCCCGTGATATAACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
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| 3UTR-3UTR CAA 90 bp | GAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCAGGTCCCTTCCCCTCTaGATGATGAAGCCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: EPQVHGCCWKLHKAWGVSRSLPL*MMKPGR Trigger: TCTTCCAGGCTTCATCATCAAGAGGGGAAGGGACCT...GCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR-3UTR CAA 90 bp | CCACACCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCAGGTCCCTTCCCCTCTaGATGATGAAGCCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: PHLANSRNLKFMAVAGSSRSLPL*MMKPGR Trigger: TCTTCCAGGCTTCATCATCAAGAGGGGAAGGGACCT...GGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR CCA 72 bp | CACACAATCTGGGTCAAAGTGATGGTGGGGCCCTTGTaGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: HTIWVKVMVGPL*SSKRSMVFRLS Trigger: ACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| 3UTR CCA 72 bp | CTCCCTCAATTCCTCTCAGGTGTATGTCACACAATCTaGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: LPQFLSGVCHTI*VKVMVGPLWSS Trigger: TGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACATACACCTGAGAGGAATTGAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| 3UTR CCA 72 bp | GGCCTGGATCTAGGAGACACATTGACATGGATCAGATaGTTCCACAAGGTTCCACACACAGTAAGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GLDLGDTLTWIR*FHKVPHTVRAG Trigger: CCCAGCTCTTACTGTGTGTGGAACCTTGTGGAACCATCTGATCCATGTCAATGTGTCTCCTAGATCCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGAGTCTGTGCCACAGAGAAGTTTaGTGCCCAAAACAGGATCCT | + |
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Preference number: 3 (lower is better) Translates to: SVIVTHRRMDRRRCHLSLCHREV*CPKQDP Trigger: AGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCA...CAGACTCAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
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| 3UTR GCA 72 bp | CCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTaGTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATT | + |
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Preference number: 3 (lower is better) Translates to: PRKFKEPQVHGC*WKLHKAWGVSI Trigger: AATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| 3UTR GCA 72 bp | GGTGAGGGAGGTCAAGTCTTTCCACTCGTCTTTGTATaGCACAGAGAAGTTTTGTGCCCAAAACAGGATCCT | + |
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Preference number: 3 (lower is better) Translates to: GEGGQVFPLVFV*HREVLCPKQDP Trigger: AGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCATACAAAGACGAGTGGAAAGACTTGACCTCCCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
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| 3UTR CCA 72 bp | TGCCACAGAGAAGTTTTGTGCCCAAAACAGGATCCTTaGGGCAGTGTCATTGTAACTCACAGGAGGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CHREVLCPKQDP*GSVIVTHRRMD Trigger: ATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
||
| 3UTR CCA 72 bp | CAACAGAGCCATTGCTGTGGATTTCAAGTCGTTCCATaGCAAACCAATATCGGGCAGACACTGGATAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QQSHCCGFQVVP*QTNIGQTLDRS Trigger: GCTTCTATCCAGTGTCTGCCCGATATTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACGAAGAATACACTTTGTaGGTAGAGATGGGGGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYEEYTL*VEMGDS Trigger: GCTATCCCCCATCTCTACCAACAAAGTGTATTCTTC...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| 3UTR GCA 72 bp | TCCAGGGCATTCTCCAGGTTAGAAAAGGCACTGTCCTaGTTATTTCCAAACACACCACCGTATGCTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SRAFSRLEKALS*LFPNTPPYAVK Trigger: TTTCACAGCATACGGTGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTTCTAACCTGGAGAATGCCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
||
| 3UTR CCA 72 bp | CACATTGAAGGCCTGGATCTAGGAGACACATTGACATaGATCAGATGGTTCCACAAGGTTCCACACACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HIEGLDLGDTLT*IRWFHKVPHTV Trigger: TACTGTGTGTGGAACCTTGTGGAACCATCTGATCCATGTCAATGTGTCTCCTAGATCCAGGCCTTCAATGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
||
| 3UTR CCA 72 bp | AAGTCGTTCCATGGCAAACCAATATCGGGCAGACACTaGATAGAAGCGACTAGCCAGAATGAACTTGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: KSFHGKPISGRH*IEATSQNELEC Trigger: ACATTCAAGTTCATTCTGGCTAGTCGCTTCTATCCAGTGTCTGCCCGATATTGGTTTGCCATGGAACGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCATATGAAGAATACACTTaGTTGGTAGAGATGGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSYEEYT*LVEMGD Trigger: ATCCCCCATCTCTACCAACAAAGTGTATTCTTCATA...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| 3UTR TCA 72 bp | AAACCTTTCCATCCACTGTGTCACAAAACAGAAACATaGCAACCTAGACACCAATACTCCCTCAATTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KPFHPLCHKTET*QPRHQYSLNSS Trigger: AGAGGAATTGAGGGAGTATTGGTGTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGAAAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | GGATCGCAGGAGATGCCACCTGAGTCTGAAGCAGCTGGCGACCTAGACCCCCAGCGTGGCCACTGCTGCTaGCACTGCCACCAACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSQEMPPESEAAGDLDPQRGHCC*HCHQRQ Trigger: CTGTCGTTGGTGGCAGTGGCAGCAGCAGTGGCCACG...CTGGGGGTCTAGGTCGCCAGCTGCTTCAGACTCAGGTGGCATCTCCTGCGATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGATGGATCGCAGGAGATGCCACCTGAGTCTGAAGCAGCTGGCGACCTAGCACCTGCTGCTCCGTaGCCACTGCTGCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QEDGSQEMPPESEAAGDLAPAAP*PLLLPL Trigger: CAGTGGCAGCAGCAGTGGCCACGGAGCAGCAGGTGC...TAGGTCGCCAGCTGCTTCAGACTCAGGTGGCATCTCCTGCGATCCATCCTCCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGATGGATCGCAGGAGATGCCACCTGAGTCTGAAGCAGCTGGCGACCTAAGTACCAGTGGCACCTaGTGCTCCGTGGCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEDGSQEMPPESEAAGDLSTSGT*CSVATA Trigger: AGCAGTGGCCACGGAGCAGCAGGTGCCACTGGTACT...TAGGTCGCCAGCTGCTTCAGACTCAGGTGGCATCTCCTGCGATCCATCCTCCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCCACAGGGGAGTCCCTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGAGCAGGAAGCACCAGTaGGGAGGGGGCCAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IATGESLSGLKRKQERLRSRKHQ*GGGQVQ Trigger: CTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCT...CCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAGGGACTCCCCTGTGGCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | GCCCGGAGAGAAGAAACCAGCACAGTCGCTAGCATAGGAGAACTGTTCACCAGTCCTCATCGTTACCTGTaGGGACCTCCCTGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARREETSTVASIGELFTSPHRYL*GPPWAP Trigger: TGGCGCCCAGGGAGGTCCTCACAGGTAACGATGAGG...ACTGGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | CTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGGTGGCGTATGTAGGGTTCCTCCGTGGCCACTGCTaGTGCCACTGCCACCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGLKRKQERLRVAYVGFLRGHC*CHCHQR Trigger: TCGTTGGTGGCAGTGGCAGCAGCAGTGGCCACGGAG...GAACCCTACATACGCCACCCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | CCACACCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCCCTCATCGTTACCTGTaGGGACCTCCCTGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLANSRNLKFMAVAGSSPHRYL*GPPWAP Trigger: TGGCGCCCAGGGAGGTCCTCACAGGTAACGATGAGG...GGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | AGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCCACCTGAGTCTGACCAGTGGCACCTGCTaGTCCGTGGCCACTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTHRRMDRRRCHLSLTSGTC*SVATAA Trigger: AGCAGCAGTGGCCACGGAGCAGCAGGTGCCACTGGT...CAGACTCAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
||
| CDS-3UTR GCA 90 bp | GATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGAGATGCAGTACCAGTGGCACCTaGTGCTCCGTGGCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPWGSVIVTHRRMDRRRCSTSGT*CSVATA Trigger: AGCAGTGGCCACGGAGCAGCAGGTGCCACTGGTACT...GCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGCTCCGTGGCCACTGCTaGTGCCACTGCCACCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: KEPQVHGCCWKLHKAWGVLRGHC*CHCHQR Trigger: TCGTTGGTGGCAGTGGCAGCAGCAGTGGCCACGGAG...CACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACACAGAGACAGCCACATaGCTGGAGCCCGCCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYTETAT*LEPALS Trigger: GGACAGGGCGGGCTCCAGTCATGTGGCTGTCTCTGT...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | ATAGCCACAGGGGAGTCCCTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGAGGTGGTCAGAGTGCTaGTTGCATACCAGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IATGESLSGLKRKQERLRRWSEC*LHTSPQ Trigger: CTGTGGACTGGTATGCAATCAGCACTCTGACCACCT...CCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAGGGACTCCCCTGTGGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCCCAAAACAGGATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATACCAGTGGCACCTGCTaGTCCGTGGCCACTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVPKTGSLGQCHCNSQEDTSGTC*SVATAA Trigger: AGCAGCAGTGGCCACGGAGCAGCAGGTGCCACTGGT...ATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTTTCTTCCTTCCCAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTCGACCACAGTACCAGTaGCACCTGCTGCTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MVSSFPGHRNKPQCTTHSRPQYQ*HLLLRG Trigger: GCCACGGAGCAGCAGGTGCCACTGGTACTGTGGTCG...AGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTGGGAAGGAAGAAACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCCCAAAACAGGATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATGCACCTGCTGCTCCGTaGCCACTGCTGCTGCCACTN | + |
|
Preference number: 4 (lower is better) Translates to: FVPKTGSLGQCHCNSQEDAPAAP*PLLLPL Trigger: NAGTGGCAGCAGCAGTGGCCACGGAGCAGCAGGTGC...ATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136056.2 |
||
| CDS-3UTR GCA 90 bp | ACCATAGGTGAATATGAAAAGCATGAAGAGGGTGGTGAGCAGACCCATCCAGATCGTGGCCACTGCTGCTaGCACTGCCACCAACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TIGEYEKHEEGGEQTHPDRGHCC*HCHQRQ Trigger: CTGTCGTTGGTGGCAGTGGCAGCAGCAGTGGCCACG...ATCTGGATGGGTCTGCTCACCACCCTCTTCATGCTTTTCATATTCACCTATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTTCCTTCCCAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTTAGTACCAGTGGCACCTaGTGCTCCGTGGCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFLPSQATEINPSVPLTLSTSGT*CSVATA Trigger: AGCAGTGGCCACGGAGCAGCAGGTGCCACTGGTACT...AAGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTGGGAAGGAAGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | ATAGCCACAGGGGAGTCCCTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGGACTGCAGTAAGAGCTaGGGTGTAAGGGACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IATGESLSGLKRKQERLRDCSKS*GVRDIF Trigger: GAAGATGTCCCTTACACCGCAGCTCTTACTGCAGTC...CCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAGGGACTCCCCTGTGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCAGCACCTGCTGCTCCGTaGCCACTGCTGCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSAPAAP*PLLLPL Trigger: CAGTGGCAGCAGCAGTGGCCACGGAGCAGCAGGTGC...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | ATAGCCACAGGGGAGTCCCTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGAGACTGAGGGCACGTTaGTCACAAGGAGATTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IATGESLSGLKRKQERLRRLRAR*SQGDCL Trigger: AAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCT...CCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAGGGACTCCCCTGTGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AAACAGGATCCTTGGGGCAGTGTCATTGTAACTCACAGGAGGATGGATCGCAGGATATCGCTGGTGATATaGCCCTCATGTGTGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQDPWGSVIVTHRRMDRRISLVI*PSCVSA Trigger: GGCCGACACACATGAGGGTCATATCACCAGCGATAT...CCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124797.8 ENSMUST00000136056.2 |
||
| CDS-3UTR TCA 90 bp | GAGCACACTTTGTTCACCAATCCTCGTGATGGTTTCTTCCTTCCCAGGCCACAGCAGGAAGGCTGGCATTaGGCTTCAGCTCCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHTLFTNPRDGFFLPRPQQEGWH*ASAPLR Trigger: CCTTAAAGGAGCTGAAGCTCAATGCCAGCCTTCCTG...CTGTGGCCTGGGAAGGAAGAAACCATCACGAGGATTGGTGAACAAAGTGTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | ATGTCACACAATCTGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGCAGGAAGGCTGGCATTaGGCTTCAGCTCCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSHNLGQSDGGALVVIKAQEGWH*ASAPLR Trigger: CCTTAAAGGAGCTGAAGCTCAATGCCAGCCTTCCTG...CGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTTAACACATCACCCCTCCAATCTGGGTCAAAGTaGTGGTGGGGCCCTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QATEINPSVPLTLNTSPLQSGSK*WWGPCG Trigger: ACCACAAGGGCCCCACCATCACTTTGACCCAGATTG...GAGGGGTGATGTGTTAAGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCAACCAGTGGCACCTGCTaGTCCGTGGCCACTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSTSGTC*SVATAA Trigger: AGCAGCAGTGGCCACGGAGCAGCAGGTGCCACTGGT...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | CTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGAGTACCAGTGGCACCTaGTGCTCCGTGGCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LANSRNLKFMAVAGSSIKSTSGT*CSVATA Trigger: AGCAGTGGCCACGGAGCAGCAGGTGCCACTGGTACT...CTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGAGCACCTGCTGCTCCGTaGCCACTGCTGCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGAPAAP*PLLLPL Trigger: CAGTGGCAGCAGCAGTGGCCACGGAGCAGCAGGTGC...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGAACAGAGACAGCCACATaGCTGGAGCCCGCCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGTETAT*LEPALS Trigger: GGACAGGGCGGGCTCCAGTCATGTGGCTGTCTCTGT...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AGCACACTTTGTTCACCAATCCTCGTGATGGTTTCTTCCTTCCCAGGCCACAGAATATCGCTGGTGATATaGCCCTCATGTGTGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STLCSPILVMVSSFPGHRISLVI*PSCVSA Trigger: GGCCGACACACATGAGGGTCATATCACCAGCGATAT...TCTGTGGCCTGGGAAGGAAGAAACCATCACGAGGATTGGTGAACAAAGTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | CCACACCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCGGACATCTTCAGACTTaGGTGTGCTCAGTACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHLANSRNLKFMAVAGSSGHLQT*VCSVPV Trigger: GACAGGTACTGAGCACACTCAAGTCTGAAGATGTCC...GGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | GTGAATATGAAAAGCATGAAGAGGGTGGTGAGCAGACCCATCCAGATGCCCGGAGGACATCTTCAGACTTaGGTGTGCTCAGTACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNMKSMKRVVSRPIQMPGGHLQT*VCSVPV Trigger: GACAGGTACTGAGCACACTCAAGTCTGAAGATGTCC...TCCGGGCATCTGGATGGGTCTGCTCACCACCCTCTTCATGCTTTTCATATTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | CGGGTTAAAGAGGAAGCAAGAGAGACTGAGGGTGGCGTATGTAGGGTTCATGCTGTTCACCAGTCACATTaGAGGCCTGGATCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKEEARETEGGVCRVHAVHQSH*RPGSGS Trigger: ACTTCCAGATCCAGGCCTTCAATGTGACTGGTGAAC...AGCATGAACCCTACATACGCCACCCTCAGTCTCTCTTGCTTCCTCTTTAACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR GCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGAACCAGTGGCACCTGCTaGTCCGTGGCCACTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGTSGTC*SVATAA Trigger: AGCAGCAGTGGCCACGGAGCAGCAGGTGCCACTGGT...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | GATGCCCGGAGAGAAGAAACCAGCACAGTCGCTAGCATAGGAGAACTGTTCACCTGGTCACAAGGAGATTaGCTTTCTTGCTCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DARREETSTVASIGELFTWSQGD*LSCSHC Trigger: GCAGTGTGAGCAAGAAAGGCAATCTCCTTGTGACCA...GGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCGGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTAGACTGAGGGCACGTTaGTCACAAGGAGATTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WVKVMVGPLWSSKRSMVFRLRAR*SQGDCL Trigger: AAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCT...AAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGTATCATGTGCAGACTGAGGGCACGTTaGTCACAAGGAGATTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLWSSKRSMVFRLSIMCRLRAR*SQGDCL Trigger: AAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCT...GCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGTATCATGTGCGAGACTGCACAAGGCTaGAACTCTCAGCTACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLWSSKRSMVFRLSIMCETAQG*NSQLHA Trigger: AGCATGTAGCTGAGAGTTCCAGCCTTGTGCAGTCTC...GCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
||
| CDS-3UTR TCA 90 bp | GACACGAAGCCCAACACAAGGCAACACGTCTTTATTTTATTAGGAAGGAAACAAAGCAGGAAGCACCAGTaGGGAGGGGGCCAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTKPNTRQHVFILLGRKQSRKHQ*GGGQVQ Trigger: CTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCT...TTGTTTCCTTCCTAATAAAATAAAGACGTGTTGCCTTGTGTTGGGCTTCGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR TCA 90 bp | CGGGTTAAAGAGGAAGCAAGAGAGACTGAGGGTGGCGTATGTAGGGTTCATGCTCCATGGTCTTTAGGCTaGGTATCATGTGCAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVKEEARETEGGVCRVHAPWSLG*VSCADH Trigger: ATGGTCTGCACATGATACTCAGCCTAAAGACCATGG...AGCATGAACCCTACATACGCCACCCTCAGTCTCTCTTGCTTCCTCTTTAACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR GCA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACGGTCAGAGTGCTGATTaGATACCAGTCCACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYGQSAD*IPVHSR Trigger: CCTGCTGTGGACTGGTATGCAATCAGCACTCTGACC...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTTAACACATCACCCCTCGACTGCAGTAAGAGCTaGGGTGTAAGGGACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATEINPSVPLTLNTSPLDCSKS*GVRDIF Trigger: GAAGATGTCCCTTACACCGCAGCTCTTACTGCAGTC...GAGGGGTGATGTGTTAAGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | CTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGGTGGCGTATGTAGGGTTCCACAGAGAAGTTTTGTaGCCAAAACAGGATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGLKRKQERLRVAYVGFHREVL*PKQDPW Trigger: CCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTG...GAACCCTACATACGCCACCCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | GATGCCCGGAGAGAAGAAACCAGCACAGTCGCTAGCATAGGAGAACTGTTCACCTATACCTTCAGAGACTaGACAAGGCTGGAACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DARREETSTVASIGELFTYTFRD*TRLELS Trigger: TGAGAGTTCCAGCCTTGTGCAGTCTCTGAAGGTATA...GGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCGGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
||
| CDS-3UTR CCA 90 bp | GATGCCCGGAGAGAAGAAACCAGCACAGTCGCTAGCATAGGAGAACTGTTCACCCCAAAACAGGATCCTTaGGGCAGTGTCATTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: DARREETSTVASIGELFTPKQDP*GSVIVT Trigger: AGTTACAATGACACTGCCCCAAGGATCCTGTTTTGG...GGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCGGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AGCACACTTTGTTCACCAATCCTCGTGATGGTTTCTTCCTTCCCAGGCCACAGACACCACCGTATGCTGTaGAATCCTCAATGCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STLCSPILVMVSSFPGHRHHRML*NPQCLA Trigger: AGCTAAGCATTGAGGATTTCACAGCATACGGTGGTG...TCTGTGGCCTGGGAAGGAAGAAACCATCACGAGGATTGGTGAACAAAGTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | GCATTTACTACACAAAAGCACTATAAACAGCAAGGAATAATAGCAGAGGGGCAACGTGGCCACTGCTGCTaGCACTGCCACCAACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AFTTQKHYKQQGIIAEGQRGHCC*HCHQRQ Trigger: CTGTCGTTGGTGGCAGTGGCAGCAGCAGTGGCCACG...TTGCCCCTCTGCTATTATTCCTTGCTGTTTATAGTGCTTTTGTGTAGTAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | GAGTATCATGTGCAGACCATAGGTGAATATGAAAAGCATGAAGAGGGTGGTGAGGTAGCTAGATCCACATaGAAGGGGCTAGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EYHVQTIGEYEKHEEGGEVARST*KGLAPS Trigger: GCTTGGGGCTAGCCCCTTGCATGTGGATCTAGCTAC...CTCACCACCCTCTTCATGCTTTTCATATTCACCTATGGTCTGCACATGATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | CTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGATGGATCGCAGGAGATaGCACCTGAGTCTGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LANSRNLKFMAVAGSSIKMDRRR*HLSLKQ Trigger: CTGCTTCAGACTCAGGTGGCATCTCCTGCGATCCAT...CTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGAAGAAACCAGCACAGTCGCTAGCATAGGAGAACTGTTCACCAGTCACCCACTCGTCTTTGTATaGCACAGAGAAGTTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RREETSTVASIGELFTSHPLVFV*HREVLC Trigger: GCACAAAACTTCTCTGTGGCATACAAAGACGAGTGG...GTGACTGGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | GCATTTACTACACAAAAGCACTATAAACAGCAAGGAATAATAGCAGAGGGGCAACGACCACAGTACCAGTaGCACCTGCTGCTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFTTQKHYKQQGIIAEGQRPQYQ*HLLLRG Trigger: GCCACGGAGCAGCAGGTGCCACTGGTACTGTGGTCG...TTGCCCCTCTGCTATTATTCCTTGCTGTTTATAGTGCTTTTGTGTAGTAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | CGGAGAGAAGAAACCAGCACAGTCGCTAGCATAGGAGAACTGTTCACCAGTCACACAGAGCCATTGCTGTaGATTTCAAGTCGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RREETSTVASIGELFTSHTEPLL*ISSRSM Trigger: CATGGAACGACTTGAAATCCACAGCAATGGCTCTGT...GTGACTGGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | CCACACCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCCTAGGTCCTGTGACTTaGGAAACATTGAAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLANSRNLKFMAVAGSSLGPVT*ETLKWA Trigger: TGCCCATTTCAATGTTTCCCAAGTCACAGGACCTAG...GGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | GGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTAGGCTGAGTATCATGTGCATTCTCTGGAAGTTATaGAGAGTCATCTGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GPLWSSKRSMVFRLSIMCILWKL*RVICQT Trigger: AGTCTGGCAGATGACTCTTCATAACTTCCAGAGAAT...GCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCACTGTGTCACAAAACAGAAACATGACAACCTAGACACCAATACTCCCGGTCAGAGTGCTGATTaGATACCAGTCCACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIHCVTKQKHDNLDTNTPGQSAD*IPVHSR Trigger: CCTGCTGTGGACTGGTATGCAATCAGCACTCTGACC...GGGAGTATTGGTGTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR GCA 90 bp | AAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGCCACTCGTCTTTGTATaGCACAGAGAAGTTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEPQVHGCCWKLHKAWGVPLVFV*HREVLC Trigger: GCACAAAACTTCTCTGTGGCATACAAAGACGAGTGG...CACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | TGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGATCCATGGTCTTTCTTGAATGTCACTGTTaGACCAAAGAGTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: WVKVMVGPLWSSKRSMVFLECHC*TKEWLI Trigger: TATGAGCCACTCTTTGGTGCAACAGTGACATTCAAG...AAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | CCAATCCTCGTGATGGTTTCTTCCTTCCCAGGCCACAGAAATAAACCCCAGTGTACAGAGCCATTGCTGTaGATTTCAAGTCGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PILVMVSSFPGHRNKPQCTEPLL*ISSRSM Trigger: CATGGAACGACTTGAAATCCACAGCAATGGCTCTGT...ACACTGGGGTTTATTTCTGTGGCCTGGGAAGGAAGAAACCATCACGAGGATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AGGACAAACCTTTCCATCCACTGTGTCACAAAACAGAAACATGACAACCTAGACATATCGCTGGTGATATaGCCCTCATGTGTGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTNLSIHCVTKQKHDNLDISLVI*PSCVSA Trigger: GGCCGACACACATGAGGGTCATATCACCAGCGATAT...GTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGAAAGGTTTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGAAGGTGGTCAGAGTGCTaGTTGCATACCAGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGRWSEC*LHTSPQ Trigger: CTGTGGACTGGTATGCAATCAGCACTCTGACCACCT...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACTGGATCTGGAAGTTATaGAGAGTCATCTGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYWIWKL*RVICQT Trigger: AGTCTGGCAGATGACTCTTCATAACTTCCAGATCCA...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR TCA 90 bp | ATGTCACACAATCTGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGATGCTCAAACCATACTaGGATTCTCTGGAAGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: MSHNLGQSDGGALVVIKAMLKPY*DSLEVM Trigger: CATAACTTCCAGAGAATCTCAGTATGGTTTGAGCAT...CGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAAACACACCACCGTATaGTGTGAAATCCTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPQVHGCCWKLHKAWGVKHTTV*CEILNA Trigger: AGCATTGAGGATTTCACAGCATACGGTGGTGTGTTT...CACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGAAGGAGCCGGTCAAGTTAAGATTCTCCACACCAAAGGTGAGGGAGGTAAACACACCACCGTATaGTGTGAAATCCTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPEGAGQVKILHTKGEGGKHTTV*CEILNA Trigger: AGCATTGAGGATTTCACAGCATACGGTGGTGTGTTT...ACCTCCCTCACCTTTGGTGTGGAGAATCTTAACTTGACCGGCTCCTTCTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| CDS-3UTR GCA 90 bp | GACACGAAGCCCAACACAAGGCAACACGTCTTTATTTTATTAGGAAGGAAACAAGTAGCTAGATCCACATaGAAGGGGCTAGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTKPNTRQHVFILLGRKQVARST*KGLAPS Trigger: GCTTGGGGCTAGCCCCTTGCATGTGGATCTAGCTAC...TTGTTTCCTTCCTAATAAAATAAAGACGTGTTGCCTTGTGTTGGGCTTCGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR GCA 90 bp | AGGACAAACCTTTCCATCCACTGTGTCACAAAACAGAAACATGACAACCTAGACATGGATCGCAGGAGATaGCACCTGAGTCTGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTNLSIHCVTKQKHDNLDMDRRR*HLSLKQ Trigger: CTGCTTCAGACTCAGGTGGCATCTCCTGCGATCCAT...GTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGAAAGGTTTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | ACCATAGGTGAATATGAAAAGCATGAAGAGGGTGGTGAGCAGACCCATCCAGATTGGTCACAAGGAGATTaGCTTTCTTGCTCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIGEYEKHEEGGEQTHPDWSQGD*LSCSHC Trigger: GCAGTGTGAGCAAGAAAGGCAATCTCCTTGTGACCA...ATCTGGATGGGTCTGCTCACCACCCTCTTCATGCTTTTCATATTCACCTATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
||
| CDS-3UTR CCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGAATGGTGGGGCCCTTGTaGTCATCAAAGCGATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGMVGPL*SSKRSM Trigger: CATGGATCGCTTTGATGACCACAAGGGCCCCACCAT...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR CCA 90 bp | ATGGTTTCTTCCTTCCCAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTGGAGACACATTGACATaGATCAGATGGTTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: MVSSFPGHRNKPQCTTHSGDTLT*IRWFHK Trigger: CTTGTGGAACCATCTGATCCATGTCAATGTGTCTCC...AGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTGGGAAGGAAGAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AAACCAATATCGGGCAGACACTGGATAGAAGCGACTAGCCAGAATGAACTTGAACACCACCGTATGCTGTaGAATCCTCAATGCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPISGRHWIEATSQNELEHHRML*NPQCLA Trigger: AGCTAAGCATTGAGGATTTCACAGCATACGGTGGTG...TTCAAGTTCATTCTGGCTAGTCGCTTCTATCCAGTGTCTGCCCGATATTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTTCCTTCCCAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTTGAAAAGGCACTGTCCTaGTTATTTCCAAACACACCA | + |
|
Preference number: 4 (lower is better) Translates to: WFLPSQATEINPSVPLTLEKALS*LFPNTP Trigger: TGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTTC...AAGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTGGGAAGGAAGAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCATGGTCACAAGGAGATTaGCTTTCTTGCTCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSWSQGD*LSCSHC Trigger: GCAGTGTGAGCAAGAAAGGCAATCTCCTTGTGACCA...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGACACCACCGTATGCTGTaGAATCCTCAATGCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGHHRML*NPQCLA Trigger: AGCTAAGCATTGAGGATTTCACAGCATACGGTGGTG...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR TCA 90 bp | ACACCAATACTCCCTCAATTCCTCTCAGGTGTATGTCACACAATCTGGGTCAAAGGATTCTGGAAGTTATaGAGAGTCATCTGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TPILPQFLSGVCHTIWVKGFWKL*RVICQT Trigger: AGTCTGGCAGATGACTCTTCATAACTTCCAGAATCC...TTTGACCCAGATTGTGTGACATACACCTGAGAGGAATTGAGGGAGTATTGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCACACAGAGAAGTTTTGTaGCCAAAACAGGATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSHREVL*PKQDPW Trigger: CCAAGGATCCTGTTTTGGGCACAAAACTTCTCTGTG...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | ATGGATCAGATGGTTCCACAAGGTTCCACACACAGTAAGAGCTGGGATTCTGGAGAACTCTCAGCTACATaGTCAAACCATACTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: MDQMVPQGSTHSKSWDSGELSAT*SNHTEI Trigger: AATCTCAGTATGGTTTGAGCATGTAGCTGAGAGTTC...TCCAGAATCCCAGCTCTTACTGTGTGTGGAACCTTGTGGAACCATCTGATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGGTTCATGCTATAGTAGGAAGAGGACAAACCTTTCCATCCACTGTGTCAAGGTCAGTGAAAGCATaGCAAAGGAGTCATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRVHAIVGRGQTFPSTVSRSVKA*QRSHSR Trigger: TCTGGAATGACTCCTTTGCCATGCTTTCACTGACCT...TGACACAGTGGATGGAAAGGTTTGTCCTCTTCCTACTATAGCATGAACCCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR CCA 90 bp | ACACCAATACTCCCTCAATTCCTCTCAGGTGTATGTCACACAATCTGGGTCAAAAGGTCAGTGAAAGCATaGCAAAGGAGTCATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPILPQFLSGVCHTIWVKRSVKA*QRSHSR Trigger: TCTGGAATGACTCCTTTGCCATGCTTTCACTGACCT...TTTGACCCAGATTGTGTGACATACACCTGAGAGGAATTGAGGGAGTATTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | GGAAACATTGAAATGGGCAACAGAGCCATTGCTGTGGATTTCAAGTCGTTCCATGAAAAGGCACTGTCCTaGTTATTTCCAAACACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GNIEMGNRAIAVDFKSFHEKALS*LFPNTP Trigger: TGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTTC...ATGGAACGACTTGAAATCCACAGCAATGGCTCTGTTGCCCATTTCAATGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124797.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAAATGAGTGACACGAAGCCCAACACAAGGCAACACGTCTTTATTTTACCAAAACAGGATCCTTaGGGCAGTGTCATTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SAEMSDTKPNTRQHVFILPKQDP*GSVIVT Trigger: AGTTACAATGACACTGCCCCAAGGATCCTGTTTTGG...TAAAATAAAGACGTGTTGCCTTGTGTTGGGCTTCGTGTCACTCATTTCTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR GCA 90 bp | AATATCTATGAAGAATACACTTTGTTGGTAGAGATGGGGGATAGCCACAGGGGAAAACACACCACCGTATaGTGTGAAATCCTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIYEEYTLLVEMGDSHRGKHTTV*CEILNA Trigger: AGCATTGAGGATTTCACAGCATACGGTGGTGTGTTT...TCCCCTGTGGCTATCCCCCATCTCTACCAACAAAGTGTATTCTTCATAGATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGAAATGAGTGACACGAAGCCCAACACAAGGCAACACGTCTTTATTTTAGAAAAGGCACTGTCCTaGTTATTTCCAAACACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SAEMSDTKPNTRQHVFILEKALS*LFPNTP Trigger: TGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTTC...TAAAATAAAGACGTGTTGCCTTGTGTTGGGCTTCGTGTCACTCATTTCTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
||
| CDS-3UTR CCA 90 bp | GCATTTACTACACAAAAGCACTATAAACAGCAAGGAATAATAGCAGAGGGGCAACTAGGTCCTGTGACTTaGGAAACATTGAAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFTTQKHYKQQGIIAEGQLGPVT*ETLKWA Trigger: TGCCCATTTCAATGTTTCCCAAGTCACAGGACCTAG...TTGCCCCTCTGCTATTATTCCTTGCTGTTTATAGTGCTTTTGTGTAGTAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR GCA 90 bp | GCATTTACTACACAAAAGCACTATAAACAGCAAGGAATAATAGCAGAGGGGCAACTTGAATGTCACTGTTaGACCAAAGAGTGGCTCATA | + |
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Preference number: 4 (lower is better) Translates to: AFTTQKHYKQQGIIAEGQLECHC*TKEWLI Trigger: TATGAGCCACTCTTTGGTGCAACAGTGACATTCAAG...TTGCCCCTCTGCTATTATTCCTTGCTGTTTATAGTGCTTTTGTGTAGTAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS CCA 90 bp | CACTGCTGCTGCCACTGCCACCAACGACAGAGACAGCCACATGACTaGAGCCCGCCCTGTCCCCGTCCGTATCCGAGATACCACTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: HCCCHCHQRQRQPHD*SPPCPRPYPRYHCC Trigger: GCAACAGTGGTATCTCGGATACGGACGGGGACAGGGCGGGCTCCAGTCATGTGGCTGTCTCTGTCGTTGGTGGCAGTGGCAGCAGCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 ENSMUST00000147275.8 ENSMUST00000147900.8 |
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| CDS-3UTR CAA 90 bp | ATAGCCACAGGGGAGTCCCTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGTGTTCACCAGTCACATaGAAGGCCTGGATCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IATGESLSGLKRKQERLRCSPVT*KAWIWK Trigger: CTTCCAGATCCAGGCCTTCAATGTGACTGGTGAACA...CCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAGGGACTCCCCTGTGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
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| CDS-3UTR CAA 90 bp | TCCCTCTCCGGGTTAAAGAGGAAGCAAGAGAGACTGAGGGTGGCGTATGTAGGGTGCCACAGAGAAGTTTaGTGCCCAAAACAGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: SLSGLKRKQERLRVAYVGCHREV*CPKQDP Trigger: AGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCA...CCCTACATACGCCACCCTCAGTCTCTCTTGCTTCCTCTTTAACCCGGAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | CCACACCTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCTGGGCAACAGAGCCATaGCTGTGGATTTCAAGTCGT | + |
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Preference number: 5 (lower is better) Translates to: PHLANSRNLKFMAVAGSSWATEP*LWISSR Trigger: ACGACTTGAAATCCACAGCAATGGCTCTGTTGCCCA...GGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | ATGTCACACAATCTGGGTCAAAGTGATGGTGGGGCCCTTGTGGTCATCAAAGCGAGGAGATTGCCTTTCTaGCTCACACTGCTGACGTAC | + |
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Preference number: 5 (lower is better) Translates to: MSHNLGQSDGGALVVIKARRLPF*LTLLTY Trigger: GTACGTCAGCAGTGTGAGCAAGAAAGGCAATCTCCT...CGCTTTGATGACCACAAGGGCCCCACCATCACTTTGACCCAGATTGTGTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| CDS TCA 90 bp | GAGAACTGTTCACCAGTCACATTGAAGGCCTGGATCTGGAAGTTATaGAGAGTCATCTGCCAGACTGAGGGCACGTTGGTCACAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ENCSPVTLKAWIWKL*RVICQTEGTLVTRR Trigger: TCTCCTTGTGACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGATCCAGGCCTTCAATGTGACTGGTGAACAGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
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| CDS-3UTR CAA 90 bp | AAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGGAGATTGCCTTTCTaGCTCACACTGCTGACGTAC | + |
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Preference number: 5 (lower is better) Translates to: KEPQVHGCCWKLHKAWGVRRLPF*LTLLTY Trigger: GTACGTCAGCAGTGTGAGCAAGAAAGGCAATCTCCT...CACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS TCA 90 bp | ATTGAAGGCCTGGATCTGGAAGTTATGAAGAGTCATCTGCCAGACTaGGGGCACGTTGGTCACAAGGAGATTGCCTTTCTTGCTCACACT | + |
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Preference number: 5 (lower is better) Translates to: IEGLDLEVMKSHLPD*GHVGHKEIAFLAHT Trigger: AGTGTGAGCAAGAAAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGATCCAGGCCTTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
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| CDS TCA 90 bp | GTAAGAGCTGGGATTCTGGAAGTTATGAAGAGTCATCTGCCAGACTaGGGGCACGTTGGTCACAAGGAGATTGCCTTTCTTGCTCACACT | + |
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Preference number: 5 (lower is better) Translates to: VRAGILEVMKSHLPD*GHVGHKEIAFLAHT Trigger: AGTGTGAGCAAGAAAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGAATCCCAGCTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | ATGGTTTCTTCCTTCCCAGGCCACAGAAATAAACCCCAGTGTACCACTCACTCTGCTAGGTCCTGTGACTaGGGAAACATTGAAATGGGC | + |
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Preference number: 5 (lower is better) Translates to: MVSSFPGHRNKPQCTTHSARSCD*GNIEMG Trigger: GCCCATTTCAATGTTTCCCAAGTCACAGGACCTAGC...AGAGTGAGTGGTACACTGGGGTTTATTTCTGTGGCCTGGGAAGGAAGAAACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACAGGAGATTGCCTTTCTaGCTCACACTGCTGACGTAC | + |
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Preference number: 5 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYRRLPF*LTLLTY Trigger: GTACGTCAGCAGTGTGAGCAAGAAAGGCAATCTCCT...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | AGGACAAACCTTTCCATCCACTGTGTCACAAAACAGAAACATGACAACCTAGACGTGATGGTGGGGCCCTaGTGGTCATCAAAGCGATCC | + |
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Preference number: 5 (lower is better) Translates to: RTNLSIHCVTKQKHDNLDVMVGP*WSSKRS Trigger: GGATCGCTTTGATGACCACAAGGGCCCCACCATCAC...GTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGAAAGGTTTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
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| CDS CCA 90 bp | CCTGTGACTTGGGAAACATTGAAATGGGCAACAGAGCCATTGCTGTaGATTTCAAGTCGTTCCATGGCAAACCAATATCGGGCAGACACT | + |
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Preference number: 5 (lower is better) Translates to: PVTWETLKWATEPLL*ISSRSMANQYRADT Trigger: AGTGTCTGCCCGATATTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGTTGCCCATTTCAATGTTTCCCAAGTCACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | GTTCATGGCTGTTGCTGGAAGCTCCATAAAGCTTGGGGAGTGAGCATTTACTACGTGACTTGGGAAACATaGAAATGGGCAACAGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VHGCCWKLHKAWGVSIYYVTWET*KWATEP Trigger: TGGCTCTGTTGCCCATTTCAATGTTTCCCAAGTCAC...GTAGTAAATGCTCACTCCCCAAGCTTTATGGAGCTTCCAGCAACAGCCATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | ACCAATACTCCCTCAATTCCTCTCAGGTGTATGTCACACAATCTGGGTCAAAGTGCTAGGTCCTGTGACTaGGGAAACATTGAAATGGGC | + |
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Preference number: 5 (lower is better) Translates to: TNTPSIPLRCMSHNLGQSARSCD*GNIEMG Trigger: GCCCATTTCAATGTTTCCCAAGTCACAGGACCTAGC...ACTTTGACCCAGATTGTGTGACATACACCTGAGAGGAATTGAGGGAGTATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | GCTGAGTATCATGTGCAGACCATAGGTGAATATGAAAAGCATGAAGAGGGTGGTTGCCACAGAGAAGTTTaGTGCCCAAAACAGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: AEYHVQTIGEYEKHEEGGCHREV*CPKQDP Trigger: AGGATCCTGTTTTGGGCACAAAACTTCTCTGTGGCA...ACCACCCTCTTCATGCTTTTCATATTCACCTATGGTCTGCACATGATACTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114171.10 |
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| CDS TCA 90 bp | AAAAGGCACTGTCCTGCTTATTTCCAAACACACCACCGTATGCTGTaGAATCCTCAATGCTTAGCTTGTCCTGTAGGAACAGCAGTACAT | + |
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Preference number: 5 (lower is better) Translates to: KRHCPAYFQTHHRML*NPQCLACPVGTAVH Trigger: ATGTACTGCTGTTCCTACAGGACAAGCTAAGCATTGAGGATTTCACAGCATACGGTGGTGTGTTTGGAAATAAGCAGGACAGTGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 ENSMUST00000124797.8 ENSMUST00000147275.8 ENSMUST00000147900.8 |
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| CDS-3UTR CAA 90 bp | CTCGCAAATTCAAGGAACCTCAAGTTCATGGCTGTTGCTGGAAGCTCCATAAAGTCTTTCCACTCGTCTTaGTATGCCACAGAGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LANSRNLKFMAVAGSSIKSFHSS*YATEKF Trigger: AAACTTCTCTGTGGCATACAAAGACGAGTGGAAAGA...CTTTATGGAGCTTCCAGCAACAGCCATGAACTTGAGGTTCCTTGAATTTGCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | AGGACAAACCTTTCCATCCACTGTGTCACAAAACAGAAACATGACAACCTAGACGTGACTTGGGAAACATaGAAATGGGCAACAGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RTNLSIHCVTKQKHDNLDVTWET*KWATEP Trigger: TGGCTCTGTTGCCCATTTCAATGTTTCCCAAGTCAC...GTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGAAAGGTTTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS-3UTR CAA 90 bp | TCCATCCACTGTGTCACAAAACAGAAACATGACAACCTAGACACCAATACTCCCTCTTTCCACTCGTCTTaGTATGCCACAGAGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: SIHCVTKQKHDNLDTNTPSFHSS*YATEKF Trigger: AAACTTCTCTGTGGCATACAAAGACGAGTGGAAAGA...GGGAGTATTGGTGTCTAGGTTGTCATGTTTCTGTTTTGTGACACAGTGGATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS TCA 72 bp | CTGCTGCCACTGCCACCAACGACAGAGACAGCCACATaGCTGGAGCCCGCCCTGTCCCCGTCCGTATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLPLPPTTETAT*LEPALSPSVSE Trigger: CTCGGATACGGACGGGGACAGGGCGGGCTCCAGTCATGTGGCTGTCTCTGTCGTTGGTGGCAGTGGCAGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 ENSMUST00000147275.8 ENSMUST00000147900.8 |
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| CDS TCA 72 bp | TCACCAGTCACATTGAAGGCCTGGATCTGGAAGTTATaGAGAGTCATCTGCCAGACTGAGGGCACGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SPVTLKAWIWKL*RVICQTEGTLV Trigger: GACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGATCCAGGCCTTCAATGTGACTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019231.12 |
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| CDS CCA 72 bp | AGTTATGAAGAGTCATCTGCCAGACTGAGGGCACGTTaGTCACAAGGAGATTGCCTTTCTTGCTCACACTGC | + |
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Preference number: 6 (lower is better) Translates to: SYEESSARLRAR*SQGDCLSCSHC Trigger: GCAGTGTGAGCAAGAAAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 ENSMUST00000154630.2 |
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| CDS CAA 90 bp | CTAGGTCCTGTGACTTGGGAAACATTGAAATGGGCAACAGAGCCATaGCTGTGGATTTCAAGTCGTTCCATGGCAAACCAATATCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGPVTWETLKWATEP*LWISSRSMANQYRA Trigger: TGCCCGATATTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGTTGCCCATTTCAATGTTTCCCAAGTCACAGGACCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS TCA 72 bp | ACATGCTCAAACCATACTGAGATTCTCTGGAAGTTATaGAGAGTCATCTGCCAGACTGAGGGCACGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TCSNHTEILWKL*RVICQTEGTLV Trigger: GACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGAGAATCTCAGTATGGTTTGAGCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154630.2 |
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| CDS CCA 72 bp | TGGGAAACATTGAAATGGGCAACAGAGCCATTGCTGTaGATTTCAAGTCGTTCCATGGCAAACCAATATCGG | + |
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Preference number: 6 (lower is better) Translates to: WETLKWATEPLL*ISSRSMANQYR Trigger: CCGATATTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGTTGCCCATTTCAATGTTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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| CDS CAA 72 bp | GTGACTTGGGAAACATTGAAATGGGCAACAGAGCCATaGCTGTGGATTTCAAGTCGTTCCATGGCAAACCAA | + |
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Preference number: 6 (lower is better) Translates to: VTWETLKWATEP*LWISSRSMANQ Trigger: TTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGTTGCCCATTTCAATGTTTCCCAAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019231.12 ENSMUST00000114171.10 |
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