Pregenerated sensors for ATP5O (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022956, ENSMUSG00000116933Ensembl transcript IDs: ENSMUST00000023677.10, ENSMUST00000154661.8, ENSMUST00000155452.8, ENSMUST00000159295.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGAGAGAACAGCGTCATCTAGAGGAGATGCTGTGGTCACTGTGCATGGCACTCGCGGTGGACACTCATaGTGGTGGAAAAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SERTASSRGDAVVTVHGTRGGHS*WWKRQR Trigger: TCTCTGCCTTTTCCACCATCATGAGTGTCCACCGCG...AGTGCCATGCACAGTGACCACAGCATCTCCTCTAGATGACGCTGTTCTCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACAGCGTCATCTAGAGGAGATGCTGTGGTCACTGTGCATGGCACTTCTCGAAGCATTTTATTGTTaGTCCAAGGACAAGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: REQRHLEEMLWSLCMALLEAFYC*SKDKSS Trigger: TGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTC...GAGAAGTGCCATGCACAGTGACCACAGCATCTCCTCTAGATGACGCTGTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCCCAATTCGGACAATCATCCCGCCCATGATTGACGGGTCAGTCTTGATCTCCAGTTTCAGTATTTaGTTTGGACTCAGGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: FSPIRTIIPPMIDGSVLISSFSI*FGLRKL Trigger: GAGCTTCCTGAGTCCAAACCAAATACTGAAACTGGA...GATCAAGACTGACCCGTCAATCATGGGCGGGATGATTGTCCGAATTGGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR CCA 72 bp | ACTCAGAGAGAACAGCGTCATCTAGAGGAGATGCTGTaGTCACTGTGCATGGCACTTCTCCGCGGTGGACAC | + |
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Preference number: 3 (lower is better) Translates to: TQREQRHLEEML*SLCMALLRGGH Trigger: GTGTCCACCGCGGAGAAGTGCCATGCACAGTGACCACAGCATCTCCTCTAGATGACGCTGTTCTCTCTGAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR-3UTR CAA 90 bp | CACACAGGTGACAGTCTCTCAGAGCATCTCCCGCATGGCCTTGCTGAGCTTCTGGTTTCAGTATTTGGTTaGGACTCAGGAAGCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: HTGDSLSEHLPHGLAELLVSVFG*DSGSSS Trigger: TGAAGAGCTTCCTGAGTCCAAACCAAATACTGAAAC...CAGAAGCTCAGCAAGGCCATGCGGGAGATGCTCTGAGAGACTGTCACCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR TCA 72 bp | TTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTaGCAGTCTCTCAGAGCATCTCCCGCATGGCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: FYCCSKDKSSHR*QSLRASPAWPC Trigger: GCAAGGCCATGCGGGAGATGCTCTGAGAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR TCA 72 bp | TCTCAGAGCATCTCCCGCATGGCCTTGCTGAGCTTCTaGATCTTGCTCTTTGCAGACATATCAACGTACTTT | + |
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Preference number: 3 (lower is better) Translates to: SQSISRMALLSF*ILLFADISTYF Trigger: AAAGTACGTTGATATGTCTGCAAAGAGCAAGATTCAGAAGCTCAGCAAGGCCATGCGGGAGATGCTCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAACTCAGAGAGAACAGCGTCATCTAGAGGAGATGCTGTGGTCACTGTGCATGGAAGCATTTTATTGTaGCTCCAAGGACAAGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: FNSERTASSRGDAVVTVHGSILL*LQGQEL Trigger: GAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCC...ATGCACAGTGACCACAGCATCTCCTCTAGATGACGCTGTTCTCTCTGAGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| CDS-3UTR GCA 90 bp | TCAGAGAGAACAGCGTCATCTAGAGGAGATGCTGTGGTCACTGTGCATGGCACTCATAGCGGCCTTCGATaGCGTAGACCTGAACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SERTASSRGDAVVTVHGTHSGLR*RRPEQG Trigger: CCCCTGTTCAGGTCTACGGCATCGAAGGCCGCTATG...AGTGCCATGCACAGTGACCACAGCATCTCCTCTAGATGACGCTGTTCTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| CDS-3UTR GCA 90 bp | CACACAGGTGACAGTCTCTCAGAGCATCTCCCGCATGGCCTTGCTGAGCTTCTGCTTCTTCTCCTTAGATaGAGCAGAGTACAGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: HTGDSLSEHLPHGLAELLLLLLR*SRVQGG Trigger: ACCGCCCTGTACTCTGCTGCATCTAAGGAGAAGAAG...CAGAAGCTCAGCAAGGCCATGCGGGAGATGCTCTGAGAGACTGTCACCTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| CDS-3UTR GCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCATAGCGGCCTTCGATaGCGTAGACCTGAACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLHSGLR*RRPEQG Trigger: CCCCTGTTCAGGTCTACGGCATCGAAGGCCGCTATG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000155452.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCTGTGGTCACTGTGCATaGCACTTCTCCGCGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLCGHCA*HFSAVD Trigger: GTCCACCGCGGAGAAGTGCCATGCACAGTGACCACA...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR TCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCGCGGTGGACACTCATaGTGGTGGAAAAGGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLRGGHS*WWKRQR Trigger: TCTCTGCCTTTTCCACCATCATGAGTGTCCACCGCG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCAGCCAGAGACACTTTaGGGTCCTTCAGGAGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLQPETL*GPSGVA Trigger: GGCAACTCCTGAAGGACCCCAAAGTGTCTCTGGCTG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| 3UTR CAA 72 bp | CGGACAATCATCCCGCCCATGATTGACGGGTCAGTCTaGATCTCCAGTTTCAGTATTTGGTTTGGACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RTIIPPMIDGSV*ISSFSIWFGLR Trigger: CCTGAGTCCAAACCAAATACTGAAACTGGAGATCAAGACTGACCCGTCAATCATGGGCGGGATGATTGTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| CDS-3UTR CCA 90 bp | GCTCTTTGCAGACATATCAACGTACTTTTCCCCAATTCGGACAATCATCCCGCCAGCTCCTTCTCCACCTaGTCCAGCTTCTTCTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: ALCRHINVLFPNSDNHPASSFST*SSFFSL Trigger: TAAGGAGAAGAAGCTGGACCAGGTGGAGAAGGAGCT...GGCGGGATGATTGTCCGAATTGGGGAAAAGTACGTTGATATGTCTGCAAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| CDS-3UTR GCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCTTCTTCTCCTTAGATaGAGCAGAGTACAGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLLLLLR*SRVQGG Trigger: ACCGCCCTGTACTCTGCTGCATCTAAGGAGAAGAAG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000155452.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCAGCTCCTTCTCCACCTaGTCCAGCTTCTTCTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLSSFST*SSFFSL Trigger: TAAGGAGAAGAAGCTGGACCAGGTGGAGAAGGAGCT...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000155452.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCTAGAGGAGATGCTGTaGTCACTGTGCATGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLLEEML*SLCMAL Trigger: AAGTGCCATGCACAGTGACCACAGCATCTCCTCTAG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCTCCAGTTTCAGTATTTaGTTTGGACTCAGGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLSSFSI*FGLRKL Trigger: GAGCTTCCTGAGTCCAAACCAAATACTGAAACTGGA...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCTTTCAGTATTTGGTTTaGACTCAGGAAGCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLFQYLV*TQEALQ Trigger: CTGAAGAGCTTCCTGAGTCCAAACCAAATACTGAAA...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR GCA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCTGAATCTTGCTCTTTaGAGACATATCAACGTACTT | + |
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Preference number: 4 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLLNLAL*RHINVL Trigger: AAGTACGTTGATATGTCTGCAAAGAGCAAGATTCAG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS GCA 90 bp | GCGCAGCAGCTCCTTCTCCACCTGGTCCAGCTTCTTCTCCTTAGATaGAGCAGAGTACAGGGCGGTTGCATAGCGGCCTTCGATGCCGTA | + |
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Preference number: 5 (lower is better) Translates to: AQQLLLHLVQLLLLR*SRVQGGCIAAFDAV Trigger: TACGGCATCGAAGGCCGCTATGCAACCGCCCTGTACTCTGCTGCATCTAAGGAGAAGAAGCTGGACCAGGTGGAGAAGGAGCTGCTGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023677.10 ENSMUST00000154661.8 ENSMUST00000155452.8 |
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| CDS TCA 90 bp | GTACCATCTGACGACCAAGTGTCCGATTCAGACAACGATACACGTTaGCTAGATGCTGTGGTCACTGTGCATGGCACTTCTCCGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VPSDDQVSDSDNDTR*LDAVVTVHGTSPRW Trigger: CCACCGCGGAGAAGTGCCATGCACAGTGACCACAGCATCTAGTCAACGTGTATCGTTGTCTGAATCGGACACTTGGTCGTCAGATGGTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159295.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCGGGGGCCTTACAAGCTaGGCAAAGGGCCTGACCACA | + |
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Preference number: 5 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLGGLTS*AKGLTT Trigger: TGTGGTCAGGCCCTTTGCCAAGCTTGTAAGGCCCCC...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000155452.8 |
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| CDS-3UTR CAA 90 bp | ACAATCATCCCGCCCATGATTGACGGGTCAGTCTTGATCTCCAGTTTCAGTATTGGGGGCCTTACAAGCTaGGCAAAGGGCCTGACCACA | + |
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Preference number: 5 (lower is better) Translates to: TIIPPMIDGSVLISSFSIGGLTS*AKGLTT Trigger: TGTGGTCAGGCCCTTTGCCAAGCTTGTAAGGCCCCC...AATACTGAAACTGGAGATCAAGACTGACCCGTCAATCATGGGCGGGATGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155452.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCATGATACCCTGGGTGTaGCCTAGGCGACCATTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLMIPWV*PRRPFS Trigger: TGAAAATGGTCGCCTAGGCAACACCCAGGGTATCAT...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR CAA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCCTCCAGTTTCAGTATTaGGTTTGGACTCAGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLLQFQY*VWTQEA Trigger: AGCTTCCTGAGTCCAAACCAAATACTGAAACTGGAG...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS-3UTR CAA 90 bp | AGGAAGCATTTTATTGTTGCTCCAAGGACAAGAGCTCACACAGGTGACAGTCTCGTTTCAGTATTTGGTTaGGACTCAGGAAGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RKHFIVAPRTRAHTGDSLVSVFG*DSGSSS Trigger: TGAAGAGCTTCCTGAGTCCAAACCAAATACTGAAAC...GAGACTGTCACCTGTGTGAGCTCTTGTCCTTGGAGCAACAATAAAATGCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023677.10 |
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| CDS GCA 72 bp | CAGCAGAGTACAGGGCGGTTGCATAGCGGCCTTCGATaGCGTAGACCTGAACAGGGGGCCTTACAAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QQSTGRLHSGLR*RRPEQGALQAW Trigger: CCAAGCTTGTAAGGCCCCCTGTTCAGGTCTACGGCATCGAAGGCCGCTATGCAACCGCCCTGTACTCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023677.10 ENSMUST00000154661.8 ENSMUST00000155452.8 |
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| CDS GCA 72 bp | AGAACAGCCAGAGACACTTTGGGGTCCTTCAGGAGTTaGCCTACGCGCAGCAGCTCCTTCTCCACCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RTARDTLGSFRS*PTRSSSFSTWS Trigger: GGACCAGGTGGAGAAGGAGCTGCTGCGCGTAGGGCAACTCCTGAAGGACCCCAAAGTGTCTCTGGCTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000154661.8 |
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| CDS CAA 72 bp | CAGAACAGCCAGAGACACTTTGGGGTCCTTCAGGAGTaGCCCTACGCGCAGCAGCTCCTTCTCCACCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: QNSQRHFGVLQE*PYAQQLLLHLV Trigger: GACCAGGTGGAGAAGGAGCTGCTGCGCGTAGGGCAACTCCTGAAGGACCCCAAAGTGTCTCTGGCTGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000154661.8 |
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| CDS CAA 90 bp | GTAGGGATTCAGAACAGCCAGAGACACTTTGGGGTCCTTCAGGAGTaGCCCTACGCGCAGCAGCTCCTTCTCCACCTGGTCCAGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VGIQNSQRHFGVLQE*PYAQQLLLHLVQLL Trigger: AAGAAGCTGGACCAGGTGGAGAAGGAGCTGCTGCGCGTAGGGCAACTCCTGAAGGACCCCAAAGTGTCTCTGGCTGTTCTGAATCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023677.10 ENSMUST00000154661.8 |
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| CDS GCA 72 bp | CTCCTTCTCCACCTGGTCCAGCTTCTTCTCCTTAGATaGAGCAGAGTACAGGGCGGTTGCATAGCGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLHLVQLLLLR*SRVQGGCIAAF Trigger: GAAGGCCGCTATGCAACCGCCCTGTACTCTGCTGCATCTAAGGAGAAGAAGCTGGACCAGGTGGAGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023677.10 ENSMUST00000154661.8 ENSMUST00000155452.8 |
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| CDS GCA 72 bp | AGTGTCCGATTCAGACAACGATACACGTTGACTAGATaGTGTGGTCACTGTGCATGGCACTTCTCCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SVRFRQRYTLTR*CGHCAWHFSAV Trigger: CACCGCGGAGAAGTGCCATGCACAGTGACCACAGCATCTAGTCAACGTGTATCGTTGTCTGAATCGGACACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159295.8 |
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| CDS TCA 72 bp | GACGACCAAGTGTCCGATTCAGACAACGATACACGTTaGCTAGATGCTGTGGTCACTGTGCATGGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: DDQVSDSDNDTR*LDAVVTVHGTS Trigger: AGAAGTGCCATGCACAGTGACCACAGCATCTAGTCAACGTGTATCGTTGTCTGAATCGGACACTTGGTCGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159295.8 |
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| CDS CAA 72 bp | AGTCACTTCTGTTGCCCTACAATGCTGGACAAGTCCTaGGGCTTCTTCCTGTGCTTTCAGATGATCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SHFCCPTMLDKS*GFFLCFQMICP Trigger: TGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGAAGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159295.8 |
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