Pregenerated sensors for ATP5MPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021290Ensembl transcript IDs: ENSMUST00000021719.7, ENSMUST00000222874.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGTTCCATGTTCCCATCTAACAAAGCTTGCTCAAGTTTAGCCGACGTCTTCATCATGGCCATGGGCAGGTaGAGGACCTTTCAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CSMFPSNKACSSLADVFIMAMGR*RTFQSF Trigger: AAAGCTTTGAAAGGTCCTGCACCTGCCCATGGCCAT...GATGAAGACGTCGGCTAAACTTGAGCAAGCTTTGTTAGATGGGAACATGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021719.7 ENSMUST00000222874.2 |
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| CDS-3UTR GCA 90 bp | TCCATGTTCCCATCTAACAAAGCTTGCTCAAGTTTAGCCGACGTCTTCATCTTGATGGCCATGGGCAGGTaGAGGACCTTTCAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SMFPSNKACSSLADVFILMAMGR*RTFQSF Trigger: AAAGCTTTGAAAGGTCCTGCACCTGCCCATGGCCAT...CAAGATGAAGACGTCGGCTAAACTTGAGCAAGCTTTGTTAGATGGGAACATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021719.7 ENSMUST00000222874.2 |
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| CDS-3UTR CAA 90 bp | ATGTTCCCATCTAACAAAGCTTGCTCAAGTTTAGCCGACGTCTTCATCTTGTGGGGGGACCCAGACTTTTaGAATCAAGGTTTGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: MFPSNKACSSLADVFILWGDPDF*NQGLKH Trigger: ATGTTTCAAACCTTGATTCAAAAAGTCTGGGTCCCC...CCACAAGATGAAGACGTCGGCTAAACTTGAGCAAGCTTTGTTAGATGGGAACAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021719.7 ENSMUST00000222874.2 |
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