Pregenerated sensors for ATP5L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038717Ensembl transcript IDs: ENSMUST00000043675.9
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CAA 90 bp | ACACAGCAGTGTTTTCAACACCTAGTATTTTATTCAGATAGCAGTCCTGTTACACCAACAATGCCACGTTaGCCTATGATCTCTCCGATA | + |
|
Preference number: 5 (lower is better) Translates to: TQQCFQHLVFYSDSSPVTPTMPR*PMISPI Trigger: TATCGGAGAGATCATAGGCAAACGTGGCATTGTTGG...TGTAACAGGACTGCTATCTGAATAAAATACTAGGTGTTGAAAACACTGCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043675.9 |
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| CDS GCA 72 bp | CTTCGAGTAAGTCACGGCAGCGGCTACCATCGACGGTaGCTTCTCCGCGAAGTTACGGATGAACTTGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LRVSHGSGYHRR*LLREVTDELGH Trigger: ATGGCCAAGTTCATCCGTAACTTCGCGGAGAAGGCACCGTCGATGGTAGCCGCTGCCGTGACTTACTCGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043675.9 |
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