Pregenerated sensors for ATP5J2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038690Ensembl transcript IDs: ENSMUST00000037056.9, ENSMUST00000161741.8, ENSMUST00000161845.2, ENSMUST00000162360.8
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAATTCTTCCTAGGTCGGAGTGGGGCGGGCAGTTATGCTCGGCCATaGAATGCCCTCCAGCGACCCCTCTTCAGTGGTACTTGCGTCGCC | + |
|
Preference number: 1 (lower is better) Translates to: EFFLGRSGAGSYARP*NALQRPLFSGTCVA Trigger: GGCGACGCAAGTACCACTGAAGAGGGGTCGCTGGAGGGCATTGCATGGCCGAGCATAACTGCCCGCCCCACTCCGACCTAGGAAGAATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| 3UTR GCA 90 bp | CACAGGTCAGGAGCACCCCAGAGCTCCACTGCTAACAGGGTGGACTaGCGTATCGAACTAGCAAAGCCACGTTCCTGGGTAGCAGGGACC | + |
|
Preference number: 1 (lower is better) Translates to: HRSGAPQSSTANRVD*RIELAKPRSWVAGT Trigger: GGTCCCTGCTACCCAGGAACGTGGCTTTGCTAGTTCGATACGGCAGTCCACCCTGTTAGCAGTGGAGCTCTGGGGTGCTCCTGACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTCGGCCATGCAATGCCCTCCAGCGACCCCTCTTCAGTGGTACTTGCGTCGGAAGGTTCAGCCAGTTaGATTCTTCCTAGGTCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: MLGHAMPSSDPSSVVLASEGSAS*ILPRSE Trigger: CTCCGACCTAGGAAGAATTCAACTGGCTGAACCTTC...CGACGCAAGTACCACTGAAGAGGGGTCGCTGGAGGGCATTGCATGGCCGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGACTGCCGTATCGAACTAGCAAAGCCACGTTCCTGGGTAGCAGGGACCCAGAAGAAATGCAGTAGCTaGAAACCACGTAGGCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VDCRIELAKPRSWVAGTQKKCSS*KPRRLP Trigger: TGGCAGCCTACGTGGTTTTCAGCTACTGCATTTCTT...CTGGGTCCCTGCTACCCAGGAACGTGGCTTTGCTAGTTCGATACGGCAGTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGGAAGGTTCAGCCAGTTaGATTCTTCCTAGGTCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EPVTFYWTLVLSQGMKVQEGSAS*ILPRSE Trigger: CTCCGACCTAGGAAGAATTCAACTGGCTGAACCTTC...CTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 ENSMUST00000162360.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGGTCGCCGCTCATGTTTaGGTTCCTTGTAAGAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: EPVTFYWTLVLSQGMKVQVAAHV*VPCKKC Trigger: GCATTTCTTACAAGGAACTCAAACATGAGCGGCGAC...CTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAGTCACCTTTTATTaGACACTAGTTCTCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: EPVTFYWTLVLSQGMKVQPVTFY*TLVLSQ Trigger: CTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGG...CTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 ENSMUST00000162360.8 |
||
| 3UTR GCA 72 bp | TCGGAGTGGGGCGGGCAGTTATGCTCGGCCATGCAATaGCCTCCAGCGACCCCTCTTCAGTGGTACTTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SEWGGQLCSAMQ*PPATPLQWYLR Trigger: ACGCAAGTACCACTGAAGAGGGGTCGCTGGAGGGCATTGCATGGCCGAGCATAACTGCCCGCCCCACTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| 3UTR CCA 72 bp | GTGGACTGCCGTATCGAACTAGCAAAGCCACGTTCCTaGGTAGCAGGGACCCAGGTCATGCTAGAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: VDCRIELAKPRS*VAGTQVMLEDL Trigger: TAAGTCCTCTAGCATGACCTGGGTCCCTGCTACCCAGGAACGTGGCTTTGCTAGTTCGATACGGCAGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAACCAGTCACCTTTTATaGGACACTAGTTCTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PVTFYWTLVLSQGMKVQPTSHLL*DTSSQS Trigger: TGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGT...TGGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 ENSMUST00000162360.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGGACTGCCGTATCGAACTAGCAAAGCCACGTTCCTGGGTAGCAGGGACCCATGCTCTGGAAGTTaGTCTCAGGATAGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGGLPYRTSKATFLGSRDPCSGS*SQDSSV Trigger: GACAGAGCTATCCTGAGATCAACTTCCAGAGCATGG...GTCCCTGCTACCCAGGAACGTGGCTTTGCTAGTTCGATACGGCAGTCCACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCCACGTTCCTGGGTAGCAGGGACCCAGGTCATGCTAGAGGACTTACTGAGCAATCTCCACAACTGTaGCTTGCATATGCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KATFLGSRDPGHARGLTEQSPQL*LAYACT Trigger: TGTGCAAGCATATGCAAGCCACAGTTGTGGAGATTG...CTCAGTAAGTCCTCTAGCATGACCTGGGTCCCTGCTACCCAGGAACGTGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAAAGAAATGCAGTAGCTaGAAACCACGTAGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVTFYWTLVLSQGMKVQPKKCSS*KPRRLP Trigger: TGGCAGCCTACGTGGTTTTCAGCTACTGCATTTCTT...TGGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAAGAAATGCAGTAGCTaGAAACCACGTAGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSHLLLDTSSQSGYEGSAKKCSS*KPRRLP Trigger: TGGCAGCCTACGTGGTTTTCAGCTACTGCATTTCTT...GGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAGTCGCCGCTCATGTTTaGGTTCCTTGTAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTFYWTLVLSQGMKVQPVAAHV*VPCKKC Trigger: GCATTTCTTACAAGGAACTCAAACATGAGCGGCGAC...TGGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCACAATCTCCACAACTGTaGCTTGCATATGCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PVTFYWTLVLSQGMKVQPQSPQL*LAYACT Trigger: TGTGCAAGCATATGCAAGCCACAGTTGTGGAGATTG...TGGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCACGTTCCTGGGTAGCAGGGACCCAGGTCATGCTAGAGGACTTACTGAGTAGCGGCACTCACAACTaGTTCCATGCTCTGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPRSWVAGTQVMLEDLLSSGTHN*FHALEV Trigger: AACTTCCAGAGCATGGAACAAGTTGTGAGTGCCGCT...ACTCAGTAAGTCCTCTAGCATGACCTGGGTCCCTGCTACCCAGGAACGTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| CDS-3UTR CAA 90 bp | CGTTCCTGGGTAGCAGGGACCCAGGTCATGCTAGAGGACTTACTGAGTTCCTTGGTGGCTTGCATATGCTaGCACACACAGAATACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSWVAGTQVMLEDLLSSLVACIC*HTQNTS Trigger: ACTCGTATTCTGTGTGTGCAAGCATATGCAAGCCAC...CAAGGAACTCAGTAAGTCCTCTAGCATGACCTGGGTCCCTGCTACCCAGGAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161845.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAGCGGCACTCACAACTaGTTCCATGCTCTGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSHLLLDTSSQSGYEGSASGTHN*FHALEV Trigger: AACTTCCAGAGCATGGAACAAGTTGTGAGTGCCGCT...GGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCGGCAGCTCTCCAAGTTaGACTTCCATGAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSHLLLDTSSQSGYEGSAGSSPS*TSMSFF Trigger: GAAGAAGCTCATGGAAGTCAAACTTGGAGAGCTGCC...GGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161741.8 ENSMUST00000162360.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCACCTTTTATTGGACACTAGTTCTCAGTCAGGGTATGAAGGTTCAGCCAGTGGCTTGCATATGCTaGCACACACAGAATACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVTFYWTLVLSQGMKVQPVACIC*HTQNTS Trigger: ACTCGTATTCTGTGTGTGCAAGCATATGCAAGCCAC...TGGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162360.8 |
||
| CDS TCA 72 bp | ACCCTCTCCGAAAGGCTCCGGCAATGCCACTGGGGGTaGAATCCCGCATCATTATCCAGCTCGGCAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLSERLRQCHWG*NPASLSSSAAL Trigger: GAGAGCTGCCGAGCTGGATAATGATGCGGGATTTCACCCCCAGTGGCATTGCCGGAGCCTTTCGGAGAGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037056.9 ENSMUST00000161741.8 ENSMUST00000161845.2 ENSMUST00000162360.8 |
||
| CDS CAA 72 bp | TCCATGAGCTTCTTCTCCTTCAGCGGCACTCACAACTaGTTCCATGCTCTGGAAGTTGATCTCAGGATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SMSFFSFSGTHN*FHALEVDLRIA Trigger: AGCTATCCTGAGATCAACTTCCAGAGCATGGAACAAGTTGTGAGTGCCGCTGAAGGAGAAGAAGCTCATGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161845.2 ENSMUST00000162360.8 |
||