Pregenerated sensors for ATP5C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025781Ensembl transcript IDs: ENSMUST00000026887.14, ENSMUST00000114896.8, ENSMUST00000114897.9
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTGCTTTCCCAGCTGCTGTaGGGGCAGCCACTTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: DSNQLKSACAFFFFTSCLLSQLL*GQPLHS Trigger: AGAATGAAGTGGCTGCCCTCACAGCAGCTGGGAAAG...CAGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCCCTGGCGGGTGCGGTTaGAAGTCAAGGTCAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: PAVFVTQWTKFLLTKTAIPGGCG*KSRSIC Trigger: ACAAATTGACCTTGACTTTCAACCGCACCCGCCAGG...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAACTTCTTTCCCAGCTaGTGTGAGGGCAGCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: PAVFVTQWTKFLLTKTAINFFPS*CEGSHF Trigger: GAAGTGGCTGCCCTCACAGCAGCTGGGAAAGAAGTT...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTAACTTCTTTCCCAGCTaGTGTGAGGGCAGCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: AVFVTQWTKFLLTKTAISNFFPS*CEGSHF Trigger: GAAGTGGCTGCCCTCACAGCAGCTGGGAAAGAAGTT...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTATCAGAAGCGTTCTTaGTGGCGTTGTCCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQYQKRS*WRCPWR Trigger: CCGCCATGGACAACGCCAGCAAGAACGCTTCTGATA...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | ACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCCATCTGTTTAGCCACTaGGGAGTGAATAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: TSCCLCNSVDQVSSDKDSHLFSH*GVNSTT Trigger: TGTGGTGCTATTCACTCCTCAGTGGCTAAACAGATG...GCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | TGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTTACTTTCCCAGCTGCTGTaGGGGCAGCCACTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLCNSVDQVSSDKDSNQLLSQLL*GQPLHS Trigger: AGAATGAAGTGGCTGCCCTCACAGCAGCTGGGAAAG...TAACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | AGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTCCTGGCGGGTGCGGTTaGAAGTCAAGGTCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQQSVKISLRILLLYLLSPGGCG*KSRSIC Trigger: ACAAATTGACCTTGACTTTCAACCGCACCCGCCAGG...AGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | ACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCCAGCAGCCCCAGAGATaGTTTCAATCAACTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSCCLCNSVDQVSSDKDSQQPQR*FQSTPL Trigger: CAAAGGAGTTGATTGAAATCATCTCTGGGGCTGCTG...GCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | AGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTAACTTCTTTCCCAGCTaGTGTGAGGGCAGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQQSVKISLRILLLYLLSNFFPS*CEGSHF Trigger: GAAGTGGCTGCCCTCACAGCAGCTGGGAAAGAAGTT...AGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGCATCTGTTTAGCCACTaGGGAGTGAATAGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQHLFSH*GVNSTT Trigger: TGTGGTGCTATTCACTCCTCAGTGGCTAAACAGATG...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | AAAGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCCTGGCGGGTGCGGTTaGAAGTCAAGGTCAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: KDSNQLKSACAFFFFTSCPGGCG*KSRSIC Trigger: ACAAATTGACCTTGACTTTCAACCGCACCCGCCAGG...ACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | ACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCCAATGTCATCATAGATaGTCATGGTCTCAGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSCCLCNSVDQVSSDKDSQCHHR*SWSQQS Trigger: CGACTGCTGAGACCATGAGCATCTATGATGACATTG...GCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | AATTTACAAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACTATCAGAAGCGTTCTTaGTGGCGTTGTCCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQTSCCLCNSVDQVSSDYQKRS*WRCPWR Trigger: CCGCCATGGACAACGCCAGCAAGAACGCTTCTGATA...GTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTTGTAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | AAAGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTTATCAGAAGCGTTCTTaGTGGCGTTGTCCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KDSNQLKSACAFFFFTSCYQKRS*WRCPWR Trigger: CCGCCATGGACAACGCCAGCAAGAACGCTTCTGATA...ACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CCA 90 bp | ACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCTCTCAGCAGTCGCAATaGTATTCAGAGAGAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TSCCLCNSVDQVSSDKDSSQQSQ*YSERRW Trigger: CCATCTTCTCTCTGAATACCATTGCGACTGCTGAGA...GCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | AGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTCATCTGTTTAGCCACTaGGGAGTGAATAGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQQSVKISLRILLLYLLSHLFSH*GVNSTT Trigger: TGTGGTGCTATTCACTCCTCAGTGGCTAAACAGATG...AGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCTCCGTCCCACATCTTTaGATGACACCAAAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVFVTQWTKFLLTKTAISVPHL*MTPKTD Trigger: ATCAGTTTTTGGTGTCATTCAAAGATGTGGGACGGA...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTCTTCTTGTCCTCAGGTaGCTTAATATCAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVFVTQWTKFLLTKTAISLLVLR*LNISLL Trigger: GAGAAGGCTGATATTAAGGCACCTGAGGACAAGAAG...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | GACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTGCTTCTTGTCCTCAGGTaGCTTAATATCAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSNQLKSACAFFFFTSCLLLVLR*LNISLL Trigger: GAGAAGGCTGATATTAAGGCACCTGAGGACAAGAAG...CAGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCACACCAATAATGAGGTaGTTCTTCTTGTCCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAVFVTQWTKFLLTKTAITPIMR*FFLSSG Trigger: ACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGT...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | GACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTGCAATGTCATCATAGATaGTCATGGTCTCAGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSNQLKSACAFFFFTSCLQCHHR*SWSQQS Trigger: CGACTGCTGAGACCATGAGCATCTATGATGACATTG...CAGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTCAATGTCATCATAGATaGTCATGGTCTCAGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AVFVTQWTKFLLTKTAISQCHHR*SWSQQS Trigger: CGACTGCTGAGACCATGAGCATCTATGATGACATTG...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTTCTCAGCAGTCGCAATaGTATTCAGAGAGAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: AVFVTQWTKFLLTKTAISSQQSQ*YSERRW Trigger: CCATCTTCTCTCTGAATACCATTGCGACTGCTGAGA...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTCCGTCCCACATCTTTaGATGACACCAAAAACTGAT | + |
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Preference number: 4 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQSVPHL*MTPKTD Trigger: ATCAGTTTTTGGTGTCATTCAAAGATGTGGGACGGA...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | AAAGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCAGCAGCCCCAGAGATaGTTTCAATCAACTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KDSNQLKSACAFFFFTSCQQPQR*FQSTPL Trigger: CAAAGGAGTTGATTGAAATCATCTCTGGGGCTGCTG...ACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR TCA 90 bp | AATTTACAAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACCAGCAGCCCCAGAGATaGTTTCAATCAACTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLQTSCCLCNSVDQVSSDQQPQR*FQSTPL Trigger: CAAAGGAGTTGATTGAAATCATCTCTGGGGCTGCTG...GTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTTGTAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | AGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTCTCTTCTTGTCCTCAGGTaGCTTAATATCAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQQSVKISLRILLLYLLSLLVLR*LNISLL Trigger: GAGAAGGCTGATATTAAGGCACCTGAGGACAAGAAG...AGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGACACCAATAATGAGGTaGTTCTTCTTGTCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQTPIMR*FFLSSG Trigger: ACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGT...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | AAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAACACCAATAATGAGGTaGTTCTTCTTGTCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KHPAVFVTQWTKFLLTKTTPIMR*FFLSSG Trigger: ACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGT...TGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CCA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTATTCAGAGAGAAGATaGGCTTCTCTTCTGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQYSERR*ASLLSC Trigger: ACAAGACAGAAGAGAAGCCCATCTTCTCTCTGAATA...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAATATCTTTCAGAGTTaGCATGTTTCGAACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVFVTQWTKFLLTKTAINIFQS*HVSNLD Trigger: ATCCAAGTTCGAAACATGGCAACTCTGAAAGATATT...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026887.14 ENSMUST00000114897.9 |
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| CDS-3UTR CCA 90 bp | AAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACATATTCAGAGAGAAGATaGGCTTCTCTTCTGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KHPAVFVTQWTKFLLTKTYSERR*ASLLSC Trigger: ACAAGACAGAAGAGAAGCCCATCTTCTCTCTGAATA...TGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTAATATCTTTCAGAGTTaGCATGTTTCGAACTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: AVFVTQWTKFLLTKTAISNIFQS*HVSNLD Trigger: ATCCAAGTTCGAAACATGGCAACTCTGAAAGATATT...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026887.14 ENSMUST00000114897.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTTATATTCAGAGAGAAGATaGGCTTCTCTTCTGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: CLCNSVDQVSSDKDSNQLYSERR*ASLLSC Trigger: ACAAGACAGAAGAGAAGCCCATCTTCTCTCTGAATA...TAACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS CCA 90 bp | TTCAGTCTCCTGGTAATATCTTTCAGAGTTGCCATGTTTCGAACTTaGATCCATTGCGGCTGCACGGCGCAGGCCGACAGCCCGACAACG | + |
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Preference number: 5 (lower is better) Translates to: FSLLVISFRVAMFRT*IHCGCTAQADSPTT Trigger: CGTTGTCGGGCTGTCGGCCTGCGCCGTGCAGCCGCAATGGATCCAAGTTCGAAACATGGCAACTCTGAAAGATATTACCAGGAGACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026887.14 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCGCGTTCTTGCTGGCGTaGTCCATGGCGGTCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: PAVFVTQWTKFLLTKTAIAFLLA*SMAVIL Trigger: CAGGATGACCGCCATGGACAACGCCAGCAAGAACGC...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCCAGCCCGGGCATACTTaGCAGCTGCCACCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PAVFVTQWTKFLLTKTAIQPGHT*QLPPSS Trigger: TGAAGATGGTGGCAGCTGCAAAGTATGCCCGGGCTG...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTGCGTTCTTGCTGGCGTaGTCCATGGCGGTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVFVTQWTKFLLTKTAISAFLLA*SMAVIL Trigger: CAGGATGACCGCCATGGACAACGCCAGCAAGAACGC...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGCAGCCCGGGCATACTTaGCAGCTGCCACCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQQPGHT*QLPPSS Trigger: TGAAGATGGTGGCAGCTGCAAAGTATGCCCGGGCTG...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | ACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCGCCTGGCGGGTGCGGTaGAAAGTCAAGGTCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: TSCCLCNSVDQVSSDKDSAWRVR*KVKVNL Trigger: CAAATTGACCTTGACTTTCAACCGCACCCGCCAGGC...GCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | CCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCGCCTGGCGGGTGCGGTaGAAAGTCAAGGTCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: PAVFVTQWTKFLLTKTAIAWRVR*KVKVNL Trigger: CAAATTGACCTTGACTTTCAACCGCACCCGCCAGGC...GATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | AATTTACAAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACGCGTTCTTGCTGGCGTaGTCCATGGCGGTCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: NLQTSCCLCNSVDQVSSDAFLLA*SMAVIL Trigger: CAGGATGACCGCCATGGACAACGCCAGCAAGAACGC...GTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTTGTAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGGCCTGGCGGGTGCGGTaGAAAGTCAAGGTCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQAWRVR*KVKVNL Trigger: CAAATTGACCTTGACTTTCAACCGCACCCGCCAGGC...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | ACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCATGAGGTGCTTCTTCTaGTCCTCAGGTGCCTTAATA | + |
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Preference number: 5 (lower is better) Translates to: TSCCLCNSVDQVSSDKDSMRCFF*SSGALI Trigger: TATTAAGGCACCTGAGGACAAGAAGAAGCACCTCAT...GCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | GCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGTATGAGGTGCTTCTTCTaGTCCTCAGGTGCCTTAATA | + |
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Preference number: 5 (lower is better) Translates to: AVFVTQWTKFLLTKTAISMRCFF*SSGALI Trigger: TATTAAGGCACCTGAGGACAAGAAGAAGCACCTCAT...ACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | AAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAATGAGGTGCTTCTTCTaGTCCTCAGGTGCCTTAATA | + |
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Preference number: 5 (lower is better) Translates to: KHPAVFVTQWTKFLLTKTMRCFF*SSGALI Trigger: TATTAAGGCACCTGAGGACAAGAAGAAGCACCTCAT...TGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAGCAATCAGAAAGTCAAGGTCAATTaGTCAATCATATCAGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: CCLCNSVDQVSSDKDSNQKVKVN*SIISEA Trigger: CGCTTCTGATATGATTGACAAATTGACCTTGACTTT...CTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | AAACATCCTGCTGTCTTTGTAACTCAGTGGACCAAGTTTCTTCTGACAAAGACAAAAGTCAAGGTCAATTaGTCAATCATATCAGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: KHPAVFVTQWTKFLLTKTKVKVN*SIISEA Trigger: CGCTTCTGATATGATTGACAAATTGACCTTGACTTT...TGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026887.14 ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS-3UTR CAA 90 bp | AAAGACAGCAATCAGTTAAAATCAGCCTGCGCATTCTTCTTCTTTACCTCTTGTAAAGTCAAGGTCAATTaGTCAATCATATCAGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: KDSNQLKSACAFFFFTSCKVKVN*SIISEA Trigger: CGCTTCTGATATGATTGACAAATTGACCTTGACTTT...ACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114896.8 ENSMUST00000114897.9 |
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| CDS CCA 72 bp | CTGGTAATATCTTTCAGAGTTGCCATGTTTCGAACTTaGATCCATTGCGGCTGCACGGCGCAGGCCGACAGC | + |
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Preference number: 6 (lower is better) Translates to: LVISFRVAMFRT*IHCGCTAQADS Trigger: GCTGTCGGCCTGCGCCGTGCAGCCGCAATGGATCCAAGTTCGAAACATGGCAACTCTGAAAGATATTACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026887.14 ENSMUST00000114897.9 |
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