Pregenerated sensors for ATP5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025393Ensembl transcript IDs: ENSMUST00000026459.6
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTaGATATGGAGAGATCAGTTGCAGTGCTGCCTTTGGCTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QGSCVACMEGNLSSR*IWRDQLQCCLWLES Trigger: GGACTCCAGCCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR-3UTR GCA 90 bp | TTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGTATGGAGAGATCAGTTaGAGTGCTGCCTTTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FNQGSCVACMEGNLSSRLYGEIS*SAAFGW Trigger: CCAGCCAAAGGCAGCACTGCAACTGATCTCTCCATA...CAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGCCCACCACTGTGAGCTCAATTATAAGCTGTTTCAGAAGCAACATAAACAGGGCTCTTGTGTGGCCTaGATGGAAGGAAACCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: VAHHCELNYKLFQKQHKQGSCVA*MEGNLS Trigger: GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCC...CTGTTTATGTTGCTTCTGAAACAGCTTATAATTGAGCTCACAGTGGTGGGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCACCACTGTGAGCTCAATTATAAGCTGTTTCAGAAGCAACATAAACAGAAGAGATCAGTTGCAGTaGTGCCTTTGGCTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: WPTTVSSIISCFRSNINRRDQLQ*CLWLES Trigger: GGACTCCAGCCAAAGGCAGCACTGCAACTGATCTCT...TCTGTTTATGTTGCTTCTGAAACAGCTTATAATTGAGCTCACAGTGGTGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR CCA 72 bp | GCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATATaGAGAGATCAGTTGCAGTGCTGCCTTTGGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: ACMEGNLSSRLI*RDQLQCCLWLE Trigger: CTCCAGCCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR-3UTR CAA 90 bp | TCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCATATGGAGAGATCAGTaGCAGTGCTGCCTTTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SHLQSRLLCGLHGRKPELIWRDQ*QCCLWL Trigger: CAGCCAAAGGCAGCACTGCAACTGATCTCTCCATAT...GAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR GCA 72 bp | GAACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTaGATGGAAGGAAACCTGAGCTCTCGCTTGATATGG | + |
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Preference number: 3 (lower is better) Translates to: EHHIFNQGSCVA*MEGNLSSRLIW Trigger: CCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR TCA 90 bp | CATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCGAGCCGCCGAAGGGCTaGGTCCCCGCAAGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: HHIFNQGSCVACMEGNLSEPPKG*VPARPR Trigger: CCGGGGCCTTGCGGGGACTCAGCCCTTCGGCGGCTC...GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | TCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCCCCGGTGGCAGTGCCTaGCTTCGGGGCCGCAGACGC | + |
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Preference number: 4 (lower is better) Translates to: SHLQSRLLCGLHGRKPELPGGSA*LRGRRR Trigger: GCGTCTGCGGCCCCGAAGGCAGGCACTGCCACCGGG...GAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | AGCTCTCGCTTGATATGGAGAGATCAGTTGCAGTGCTGCCTTTGGCTGGAGTCCCACAGCGCCGATGACTaGCACGATTCGCCCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRLIWRDQLQCCLWLESHSADD*HDSPGG Trigger: GCCACCGGGCGAATCGTGGCAGTCATCGGCGCTGTG...GGACTCCAGCCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCCCCACCCTTGGCGTATaGGGCCAGCAGATCCACAAC | + |
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Preference number: 4 (lower is better) Translates to: HHIFNQGSCVACMEGNLSPTLGV*GQQIHN Trigger: GTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGG...GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | AATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATACCAGTCTGCTGTCCCTaGCTTGCACTTCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: NQGSCVACMEGNLSSRLIPVCCP*LALPGH Trigger: ATGCCCTGGAAGTGCAAGGCAGGGACAGCAGACTGG...TATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| 3UTR CAA 72 bp | TGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTaGATATGGAGAGATCAGTTGCAGTGCTGCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: CVACMEGNLSSR*IWRDQLQCCLW Trigger: CCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | CAGAGAGAACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAGTGCTCTCCCCCAAATaGTGGGCCACCTCCAAAACC | + |
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Preference number: 4 (lower is better) Translates to: QREHHIFNQGSCVACMEGVLSPK*WATSKT Trigger: GGTTTTGGAGGTGGCCCAGCATTTGGGGGAGAGCAC...TCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGTTCTCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | CTGCATGGAAGGAAACCTGAGCTCTCGCTTGATATGGAGAGATCAGTTGCAGTGTCCTTTCCTGCATTGTaGCCATGTCGGTGGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LHGRKPELSLDMERSVAVSFPAL*PCRWLG Trigger: CCCTAGCCACCGACATGGGCACAATGCAGGAAAGGA...CACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | ACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGATGGGCAAAGGTGGTTaGAGGGGCAGGGTCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TSHLQSRLLCGLHGRKPEMGKGG*RGRVSQ Trigger: CTGACTGACCCTGCCCCTGCAACCACCTTTGCCCAT...CTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | CACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTTCCTGCAGGATTTTCTaGACTCCTCGGGCGACGTCA | + |
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Preference number: 4 (lower is better) Translates to: HIFNQGSCVACMEGNLSSSCRIF*TPRATS Trigger: TGACGTCGCCCGAGGAGTGCAGAAAATCCTGCAGGA...AGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CAGAGAGAACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAATCCCTCATCGAACTaGACGTCCACCACAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QREHHIFNQGSCVACMEGNPSSN*TSTTAP Trigger: CGGCGCTGTGGTGGACGTCCAGTTCGATGAGGGATT...TCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGTTCTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | AAACCTGAGCTCTCGCTTGATATGGAGAGATCAGTTGCAGTGCTGCCTTTGGCTCTCTCCCCCAAATGCTaGGCCACCTCCAAAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPELSLDMERSVAVLPLALSPKC*ATSKTS Trigger: ACTGGTTTTGGAGGTGGCCCAGCATTTGGGGGAGAG...AGCCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGACCTCTGAGCCAGCCTaGGTAAAGCGGAAGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLQSRLLCGLHGRKPELSTSEPA*VKRKML Trigger: CAACATCTTCCGCTTTACCCAGGCTGGCTCAGAGGT...CGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCCACGGCTTCTTCAATaGGTCCCACCATGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HLQSRLLCGLHGRKPELSPRLLQ*VPPCRR Trigger: CCTTCTACATGGTGGGACCCATTGAAGAAGCCGTGG...CGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCAACAGCAGGACATCTTaGCCCTCCTGGTCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HHIFNQGSCVACMEGNLSNSRTS*PSWSLK Trigger: CTTCAGAGACCAGGAGGGCCAAGATGTCCTGCTGTT...GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | CTGAGCTCTCGCTTGATATGGAGAGATCAGTTGCAGTGCTGCCTTTGGCTGGAGGTCACCAGAATCTCCTaGTCAACACTCATCTCTATG | + |
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Preference number: 4 (lower is better) Translates to: LSSRLIWRDQLQCCLWLEVTRIS*STLISM Trigger: CATAGAGATGAGTGTTGAGCAGGAGATTCTGGTGAC...CTCCAGCCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | CATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCATGGTATAAATCATTaGCCTCACGGGTCCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: HLQSRLLCGLHGRKPELSHGINH*PHGSSH Trigger: GTGAGAGGACCCGTGAGGGCAATGATTTATACCATG...CGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | CATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCCAGCTTATCAGCCTTTaGCACGGCTTCTTCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: HHIFNQGSCVACMEGNLSQLISL*HGFFNG Trigger: CCCATTGAAGAAGCCGTGGCAAAGGCTGATAAGCTG...GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | AATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATACCAGGGCATTTAGGATaGGTGGTAATCCCTCATCGA | + |
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Preference number: 4 (lower is better) Translates to: NQGSCVACMEGNLSSRLIPGHLG*VVIPHR Trigger: TCGATGAGGGATTACCACCCATCCTAAATGCCCTGG...TATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTAGAGGTGGAGTCCAGTaGATCCACAGCTGGATAGAT | + |
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Preference number: 4 (lower is better) Translates to: HIFNQGSCVACMEGNLSSRGGVQ*IHSWID Trigger: ATCTATCCAGCTGTGGATCCACTGGACTCCACCTCT...AGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR TCA 90 bp | CATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGTACCCAAGATGGCAATaGTGTCCTGGAGAGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLQSRLLCGLHGRKPELSYPRWQ*CPGEIC Trigger: ACAAATCTCTCCAGGACATCATTGCCATCTTGGGTA...CGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR TCA 90 bp | ACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCAACACTCATCTCTATaGACTCAGGAGCCTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TSHLQSRLLCGLHGRKPEQHSSL*TQEPQH Trigger: ATGCTGAGGCTCCTGAGTTCATAGAGATGAGTGTTG...CTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR GCA 90 bp | TGGCCCACCACTGTGAGCTCAATTATAAGCTGTTTCAGAAGCAACATAAACAGACGACCCGTGCTCTTCTaGCAGCTTATCAGCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: WPTTVSSIISCFRSNINRRPVLF*QLISLC Trigger: GCAAAGGCTGATAAGCTGGCAGAAGAGCACGGGTCG...TCTGTTTATGTTGCTTCTGAAACAGCTTATAATTGAGCTCACAGTGGTGGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCCACCACTGTGAGCTCAATTATAAGCTGTTTCAGAAGCAACATAAACAGGTGGTAGCATCCAAATaGGCAAAGGTGGTTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VAHHCELNYKLFQKQHKQVVASK*AKVVAG Trigger: CCCTGCAACCACCTTTGCCCATTTGGATGCTACCAC...CTGTTTATGTTGCTTCTGAAACAGCTTATAATTGAGCTCACAGTGGTGGGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | CTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATATGGAGAGAGCTTGTTCTGGGAGATaGTCATATTCACCTGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: LLCGLHGRKPELSLDMERACSGR*SYSPAK Trigger: TTTAGCAGGTGAATATGACCATCTCCCAGAACAAGC...TCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | ACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGGAATCCAGTACTTTCTaGCCTCTAACCAAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TSHLQSRLLCGLHGRKPEESSTF*PLTKPS Trigger: TGAAGGCTTGGTTAGAGGCCAGAAAGTACTGGATTC...CTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | AATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATAATACCAACGCTACCTTaGAAGTGGCATCTTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: NQGSCVACMEGNLSSRLIIPTLP*KWHLLD Trigger: ATCTAAAAGATGCCACTTCCAAGGTAGCGTTGGTAT...TATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CCA 90 bp | AGAGAACATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCCTGCTAAAATCTGCTaGAATCCTTTAATGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: REHHIFNQGSCVACMEGNPAKIC*NPLMVS Trigger: GGAGACCATTAAAGGATTCCAGCAGATTTTAGCAGG...GTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATGTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS TCA 90 bp | CAGCTCGCAGTAGAAGCTGCGCCTGTGGCAGAGCCGCCGAAGGGCTaGGTCCCCGCAAGGCCCCGGAGGCCGAGGCCGAGGCCACACGCC | + |
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Preference number: 5 (lower is better) Translates to: QLAVEAAPVAEPPKG*VPARPRRPRPRPHA Trigger: GGCGTGTGGCCTCGGCCTCGGCCTCCGGGGCCTTGCGGGGACTCAGCCCTTCGGCGGCTCTGCCACAGGCGCAGCTTCTACTGCGAGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS GCA 90 bp | CACCACAGCGCCGATGACTGCCACGATTCGCCCGGTGGCAGTGCCTaGCTTCGGGGCCGCAGACGCCTGCGCCGCATAGTCTCTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HHSADDCHDSPGGSA*LRGRRRLRRIVSGR Trigger: CCTGCCAGAGACTATGCGGCGCAGGCGTCTGCGGCCCCGAAGGCAGGCACTGCCACCGGGCGAATCGTGGCAGTCATCGGCGCTGTGGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 90 bp | CAGTGCCTGCCTTCGGGGCCGCAGACGCCTGCGCCGCATAGTCTCTaGCAGGATGAACCCCGGCGGGAGCAGCTCGCAGTAGAAGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: QCLPSGPQTPAPHSL*QDEPRREQLAVEAA Trigger: CGCAGCTTCTACTGCGAGCTGCTCCCGCCGGGGTTCATCCTGCCAGAGACTATGCGGCGCAGGCGTCTGCGGCCCCGAAGGCAGGCACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS TCA 90 bp | TGGGTGGTAATCCCTCATCGAACTGGACGTCCACCACAGCGCCGATaGCTGCCACGATTCGCCCGGTGGCAGTGCCTGCCTTCGGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: WVVIPHRTGRPPQRR*LPRFARWQCLPSGP Trigger: CGGCCCCGAAGGCAGGCACTGCCACCGGGCGAATCGTGGCAGTCATCGGCGCTGTGGTGGACGTCCAGTTCGATGAGGGATTACCACCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 90 bp | TGCACTTCCAGGGCATTTAGGATGGGTGGTAATCCCTCATCGAACTaGACGTCCACCACAGCGCCGATGACTGCCACGATTCGCCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: CTSRAFRMGGNPSSN*TSTTAPMTATIRPV Trigger: CACCGGGCGAATCGTGGCAGTCATCGGCGCTGTGGTGGACGTCCAGTTCGATGAGGGATTACCACCCATCCTAAATGCCCTGGAAGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 90 bp | CCCAACTCAGCAATAGCCCGGGACAACACAGTGGTAGCATCCAAATaGGCAAAGGTGGTTGCAGGGGCAGGGTCAGTCAGGTCATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PNSAIARDNTVVASK*AKVVAGAGSVRSSA Trigger: TGCTGATGACCTGACTGACCCTGCCCCTGCAACCACCTTTGCCCATTTGGATGCTACCACTGTGTTGTCCCGGGCTATTGCTGAGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 90 bp | AACGCCAGCACCTCCAAAGAGTCCGATTTTCCCACCCTTGGCGTATaGGGCCAGCAGATCCACAACCTTTATCCCAGTCACCAGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: NASTSKESDFPTLGV*GQQIHNLYPSHQNL Trigger: GAGATTCTGGTGACTGGGATAAAGGTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGGAAAATCGGACTCTTTGGAGGTGCTGGCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 90 bp | TCTTTCCAACGCCAGCACCTCCAAAGAGTCCGATTTTCCCACCCTTaGCGTATGGGGCCAGCAGATCCACAACCTTTATCCCAGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: SFQRQHLQRVRFSHP*RMGPADPQPLSQSP Trigger: TGGTGACTGGGATAAAGGTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGGAAAATCGGACTCTTTGGAGGTGCTGGCGTTGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | TCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCAATGGGCAAAGGTGGTaGCAGGGGCAGGGTCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SHLQSRLLCGLHGRKPELNGQRW*QGQGQS Trigger: TGACTGACCCTGCCCCTGCAACCACCTTTGCCCATT...GAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CTGCATGGAAGGAAACCTGAGCTCTCGCTTGATATGGAGAGATCAGTTGCAGTGCCAGCTTATCAGCCTTaGCCACGGCTTCTTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: LHGRKPELSLDMERSVAVPAYQP*PRLLQW Trigger: CCATTGAAGAAGCCGTGGCAAAGGCTGATAAGCTGG...CACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGGCTTTGGCGACATTGTaGATTAGCTCCATGATCAGT | + |
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Preference number: 5 (lower is better) Translates to: HLQSRLLCGLHGRKPELSALATL*ISSMIS Trigger: ACTGATCATGGAGCTAATCAACAATGTCGCCAAAGC...CGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCATGGTATAAATCATaGCCCTCACGGGTCCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HHIFNQGSCVACMEGNLSSWYKS*PSRVLS Trigger: TGAGAGGACCCGTGAGGGCAATGATTTATACCATGA...GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | AAACCTGAGCTCTCGCTTGATATGGAGAGATCAGTTGCAGTGCTGCCTTTGGCTCACCATGTAGAAGGCTaGTTCTGGGAGATGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: KPELSLDMERSVAVLPLAHHVEG*FWEMVI Trigger: TATGACCATCTCCCAGAACAAGCCTTCTACATGGTG...AGCCAAAGGCAGCACTGCAACTGATCTCTCCATATCAAGCGAGAGCTCAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATATGGAGAGAGCAAATTGTTTGGTTTaGATAGGACCTCTCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: LLCGLHGRKPELSLDMERANCLV*IGPLSS Trigger: TGATGAGAGAGGTCCTATCAAAACCAAACAATTTGC...TCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | TCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCGTAAAGCGGAAGATGTaGTCAATAAACAGCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SHLQSRLLCGLHGRKPELVKRKM*SINSRT Trigger: TGTCCTGCTGTTTATTGACAACATCTTCCGCTTTAC...GAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CATCACATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCATAGGAGCAAATTGTTaGGTTTTGATAGGACCTCTC | + |
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Preference number: 5 (lower is better) Translates to: HHIFNQGSCVACMEGNLSIGANC*VLIGPL Trigger: GAGAGGTCCTATCAAAACCAAACAATTTGCTCCTAT...GCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CATCTTCAATCAAGGCTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGATGAATAGGAGCAAATaGTTTGGTTTTGATAGGACC | + |
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Preference number: 5 (lower is better) Translates to: HLQSRLLCGLHGRKPELSMNRSK*FGFDRT Trigger: GGTCCTATCAAAACCAAACAATTTGCTCCTATTCAT...CGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAGCCTTGATTGAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS-3UTR CAA 90 bp | CTCTTGTGTGGCCTGCATGGAAGGAAACCTGAGCTCTCGCTTGATATGGAGAGAGTGGCATCTTTTAGATaGATAACACCAGATTCAATC | + |
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Preference number: 5 (lower is better) Translates to: LLCGLHGRKPELSLDMERVASFR*ITPDSI Trigger: GATTGAATCTGGTGTTATCAATCTAAAAGATGCCAC...TCTCTCCATATCAAGCGAGAGCTCAGGTTTCCTTCCATGCAGGCCACACAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 90 bp | GAAGTGGCATCTTTTAGATTGATAACACCAGATTCAATCATTTCATaGTATAAATCATTGCCCTCACGGGTCCTCTCACCAACACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: EVASFRLITPDSIIS*YKSLPSRVLSPTPA Trigger: TGCTGGTGTTGGTGAGAGGACCCGTGAGGGCAATGATTTATACCATGAAATGATTGAATCTGGTGTTATCAATCTAAAAGATGCCACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 72 bp | CCTTCGGGGCCGCAGACGCCTGCGCCGCATAGTCTCTaGCAGGATGAACCCCGGCGGGAGCAGCTCGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PSGPQTPAPHSL*QDEPRREQLAV Trigger: TACTGCGAGCTGCTCCCGCCGGGGTTCATCCTGCCAGAGACTATGCGGCGCAGGCGTCTGCGGCCCCGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS GCA 72 bp | CTCATCGAACTGGACGTCCACCACAGCGCCGATGACTaGCACGATTCGCCCGGTGGCAGTGCCTGCCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LIELDVHHSADD*HDSPGGSACLR Trigger: CCGAAGGCAGGCACTGCCACCGGGCGAATCGTGGCAGTCATCGGCGCTGTGGTGGACGTCCAGTTCGATGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS TCA 72 bp | ATCCCTCATCGAACTGGACGTCCACCACAGCGCCGATaGCTGCCACGATTCGCCCGGTGGCAGTGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: IPHRTGRPPQRR*LPRFARWQCLP Trigger: AGGCAGGCACTGCCACCGGGCGAATCGTGGCAGTCATCGGCGCTGTGGTGGACGTCCAGTTCGATGAGGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 72 bp | GCAATAGCCCGGGACAACACAGTGGTAGCATCCAAATaGGCAAAGGTGGTTGCAGGGGCAGGGTCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: AIARDNTVVASK*AKVVAGAGSVR Trigger: CCTGACTGACCCTGCCCCTGCAACCACCTTTGCCCATTTGGATGCTACCACTGTGTTGTCCCGGGCTATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 72 bp | CGCCAGCACCTCCAAAGAGTCCGATTTTCCCACCCTTaGCGTATGGGGCCAGCAGATCCACAACCTTTATCC | + |
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Preference number: 6 (lower is better) Translates to: RQHLQRVRFSHP*RMGPADPQPLS Trigger: GGATAAAGGTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGGAAAATCGGACTCTTTGGAGGTGCTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CAA 90 bp | GTCTTTCCAACGCCAGCACCTCCAAAGAGTCCGATTTTCCCACCCTaGGCGTATGGGGCCAGCAGATCCACAACCTTTATCCCAGTCACC | + |
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Preference number: 6 (lower is better) Translates to: VFPTPAPPKSPIFPP*AYGASRSTTFIPVT Trigger: GGTGACTGGGATAAAGGTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGGAAAATCGGACTCTTTGGAGGTGCTGGCGTTGGAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS GCA 72 bp | AATGCTGGGCCACCTCCAAAACCAGTCTGCTGTCCCTaGCTTGCACTTCCAGGGCATTTAGGATGGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: NAGPPPKPVCCP*LALPGHLGWVV Trigger: TACCACCCATCCTAAATGCCCTGGAAGTGCAAGGCAGGGACAGCAGACTGGTTTTGGAGGTGGCCCAGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 72 bp | AGGGCATTTAGGATGGGTGGTAATCCCTCATCGAACTaGACGTCCACCACAGCGCCGATGACTGCCACGATT | + |
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Preference number: 6 (lower is better) Translates to: RAFRMGGNPSSN*TSTTAPMTATI Trigger: AATCGTGGCAGTCATCGGCGCTGTGGTGGACGTCCAGTTCGATGAGGGATTACCACCCATCCTAAATGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 72 bp | ATAGCAATAGTTCTGACCGTGCTCTCCCCCAAATGCTaGGCCACCTCCAAAACCAGTCTGCTGTCCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: IAIVLTVLSPKC*ATSKTSLLSLP Trigger: AGGCAGGGACAGCAGACTGGTTTTGGAGGTGGCCCAGCATTTGGGGGAGAGCACGGTCAGAACTATTGCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CAA 72 bp | ACGCCAGCACCTCCAAAGAGTCCGATTTTCCCACCCTaGGCGTATGGGGCCAGCAGATCCACAACCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: TPAPPKSPIFPP*AYGASRSTTFI Trigger: GATAAAGGTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGGAAAATCGGACTCTTTGGAGGTGCTGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CCA 72 bp | ACCTCCAAAGAGTCCGATTTTCCCACCCTTGGCGTATaGGGCCAGCAGATCCACAACCTTTATCCCAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: TSKESDFPTLGV*GQQIHNLYPSH Trigger: GTGACTGGGATAAAGGTTGTGGATCTGCTGGCCCCATACGCCAAGGGTGGGAAAATCGGACTCTTTGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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| CDS CAA 72 bp | GGTGGTTCGTTCATCTGTCCATATACCAACGCTACCTaGGAAGTGGCATCTTTTAGATTGATAACACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GGSFICPYTNAT*EVASFRLITPD Trigger: ATCTGGTGTTATCAATCTAAAAGATGCCACTTCCAAGGTAGCGTTGGTATATGGACAGATGAACGAACCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026459.6 |
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