Pregenerated sensors for ATP5A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025428Ensembl transcript IDs: ENSMUST00000026495.15, ENSMUST00000114748.2, ENSMUST00000135678.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCCCGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTaGCCACCACACAAATCCTGGTACACACCTGAGCCCACCCCCACA | + |
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Preference number: 1 (lower is better) Translates to: IPGGRRVLSYRLAVL*PPHKSWYTPEPTPT Trigger: TGTGGGGGTGGGCTCAGGTGTGTACCAGGATTTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 ENSMUST00000135678.2 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACAAGCATTAAATTCCCGGTaGAAGGAGGGTACTGTCATA | + |
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Preference number: 2 (lower is better) Translates to: RWKEGTVIQAGCPLTTTQALNSR*KEGTVI Trigger: TATGACAGTACCCTCCTTCCACCGGGAATTTAATGC...TTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 ENSMUST00000135678.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGAGTTCTCTTTTTAATCAATCACAAAGTACTTCCGAATTTCATAGTGGACTATGGCAGACAGACTaGTACAAGAATAGCCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: EQSSLFNQSQSTSEFHSGLWQTD*YKNSLG Trigger: GCCTAGGCTATTCTTGTAGCAGTCTGTCTGCCATAG...TCCACTATGAAATTCGGAAGTACTTTGTGATTGATTAAAAAGAGAACTCTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGAGTTCTCTTTTTAATCAATCACAAAGTACTTCCGAATTTCATAGTGGAGCATTAAATTCCCGGTaGAAGGAGGGTACTGTCATA | + |
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Preference number: 2 (lower is better) Translates to: EQSSLFNQSQSTSEFHSGALNSR*KEGTVI Trigger: TATGACAGTACCCTCCTTCCACCGGGAATTTAATGC...TCCACTATGAAATTCGGAAGTACTTTGTGATTGATTAAAAAGAGAACTCTGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| 3UTR TCA 72 bp | GGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTaGCCACCACACAAATCCTGGTACACACCTGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRRVLSYRLAVL*PPHKSWYTPEP Trigger: GGGCTCAGGTGTGTACCAGGATTTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 ENSMUST00000135678.2 |
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| 3UTR CCA 72 bp | AAATTCCCGGTGGAAGGAGGGTACTGTCATACAGGCTaGCTGTCCTCTGACCACCACACAAATCCTGGTACA | + |
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Preference number: 3 (lower is better) Translates to: KFPVEGGYCHTG*LSSDHHTNPGT Trigger: TGTACCAGGATTTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGGGAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 ENSMUST00000135678.2 |
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| 3UTR GCA 72 bp | ATAGTGGACAGCTTTGAATTATCTATCCATGCTGACTaGACCAGCAAGAACAGGGTAAGAGAGCAATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: IVDSFELSIHAD*TSKNRVREQFA Trigger: GGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTGCAGTCAGCATGGATAGATAATTCAAAGCTGTCCACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR TCA 90 bp | GTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACAAATGCCACCTCCCGGTACTaGGCCAACTCCAGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: VEGGYCHTGWLSSDHHTNATSRY*ANSSFM Trigger: CATGAAGCTGGAGTTGGCTCAGTACCGGGAGGTGGC...ATTTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CCA 90 bp | CCGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACATCCTCTCCTCGAGAATaGAGGACATCTCAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVEGGYCHTGWLSSDHHTSSPRE*RTSQLC Trigger: GCACAGCTGAGATGTCCTCCATTCTCGAGGAGAGGA...TGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000135678.2 |
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| CDS-3UTR CCA 90 bp | CCGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACACGATGGTGTACTTCATaGCATCCGCATCCGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PVEGGYCHTGWLSSDHHTRWCTS*HPHPSV Trigger: GACTGACGGATGCGGATGCCATGAAGTACACCATCG...TGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CCA 90 bp | CCGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACAAAATCAGAACCAAACTaGGCAAACGCAGCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVEGGYCHTGWLSSDHHTKSEPN*ANAATS Trigger: GGAGGTGGCTGCGTTTGCCCAGTTTGGTTCTGATTT...TGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CCA 90 bp | CACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCCGGGGACATCCACGATaGCGCCTGTCCTCTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: HQQEQGKRAICQLWQTDCRGHPR*RLSSSQ Trigger: TTGTGAAGAGGACAGGCGCCATCGTGGATGTCCCCG...GCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR GCA 90 bp | TCCTCTGACCACCACACAAATCCTGGTACACACCTGAGCCCACCCCCACACAAAAGGACATCTCAGCTGTaGCAGTCTTCTGAAGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: SSDHHTNPGTHLSPPPHKRTSQL*QSSEVE Trigger: CTCGACTTCAGAAGACTGGCACAGCTGAGATGTCCT...TTTGTGTGGGGGTGGGCTCAGGTGTGTACCAGGATTTGTGTGGTGGTCAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000135678.2 |
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| CDS-3UTR CCA 90 bp | CACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCACCCCAAAGCATTTTTaGAGACCAGTCCCGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: HQQEQGKRAICQLWQTDCTPKHF*RPVPPV Trigger: GACGGGCGGGACTGGTCTCCAAAAATGCTTTGGGGT...GCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026495.15 |
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| CDS-3UTR CCA 90 bp | GTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACAAATCGATGGTGTACTTCATaGCATCCGCATCCGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: VEGGYCHTGWLSSDHHTNRWCTS*HPHPSV Trigger: GACTGACGGATGCGGATGCCATGAAGTACACCATCG...ATTTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACAATGCACCAACAAAGGATaGCCCCAAAGCATTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RWKEGTVIQAGCPLTTTQCTNKG*PQSIFG Trigger: TCCAAAAATGCTTTGGGGTCATCCTTTGTTGGTGCA...TTGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000135678.2 |
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| CDS-3UTR GCA 90 bp | ACAAATCCTGGTACACACCTGAGCCCACCCCCACACAAACTAGCACACAGTATGAGGACATCTCAGCTGTaGCAGTCTTCTGAAGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: TNPGTHLSPPPHKLAHSMRTSQL*QSSEVE Trigger: CTCGACTTCAGAAGACTGGCACAGCTGAGATGTCCT...CATACTGTGTGCTAGTTTGTGTGGGGGTGGGCTCAGGTGTGTACCAGGATTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000135678.2 |
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| CDS-3UTR CCA 90 bp | CACCTGAGCCCACCCCCACACAAACTAGCACACAGTATGGAACTTTTATTCATGACCCCAAAGCATTTTTaGAGACCAGTCCCGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: HLSPPPHKLAHSMELLFMTPKHF*RPVPPV Trigger: GACGGGCGGGACTGGTCTCCAAAAATGCTTTGGGGT...CATGAATAAAAGTTCCATACTGTGTGCTAGTTTGTGTGGGGGTGGGCTCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000135678.2 |
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| CDS-3UTR TCA 90 bp | ACAAATCCTGGTACACACCTGAGCCCACCCCCACACAAACTAGCACACAGTATGCAGCCTGTGTTTCAATaGCTGGTAAGGCAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TNPGTHLSPPPHKLAHSMQPVFQ*LVRQSK Trigger: CTTTGACTGCCTTACCAGTCATTGAAACACAGGCTG...CATACTGTGTGCTAGTTTGTGTGGGGGTGGGCTCAGGTGTGTACCAGGATTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR TCA 90 bp | GAATTATCTATCCATGCTGACTGCACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCACCTCCCGGTACTaGGCCAACTCCAGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: ELSIHADCTSKNRVREQFATSRY*ANSSFM Trigger: CATGAAGCTGGAGTTGGCTCAGTACCGGGAGGTGGC...AAATTGCTCTCTTACCCTGTTCTTGCTGGTGCAGTCAGCATGGATAGATAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCTACAACATTCCTCAGCCCGTaGACTCGCGCAATACCATCA | + |
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Preference number: 4 (lower is better) Translates to: SKNRVREQFASYGRQTATTFLSP*TRAIPS Trigger: TGATGGTATTGCGCGAGTGCACGGGCTGAGGAATGT...TGTAGCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR GCA 90 bp | ACAAATCCTGGTACACACCTGAGCCCACCCCCACACAAACTAGCACACAGTATGGATAACAGCCACCAATaGTTAACACACGCCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TNPGTHLSPPPHKLAHSMDNSHQ*LTHAQS Trigger: AGACTGGGCGTGTGTTAAGCATTGGTGGCTGTTATC...CATACTGTGTGCTAGTTTGTGTGGGGGTGGGCTCAGGTGTGTACCAGGATTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135678.2 |
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| CDS-3UTR CCA 90 bp | AGCTTTGAATTATCTATCCATGCTGACTGCACCAGCAAGAACAGGGTAAGAGAGTCCTCTCCTCGAGAATaGAGGACATCTCAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SFELSIHADCTSKNRVRESSPRE*RTSQLC Trigger: GCACAGCTGAGATGTCCTCCATTCTCGAGGAGAGGA...CTCTCTTACCCTGTTCTTGCTGGTGCAGTCAGCATGGATAGATAATTCAAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026495.15 |
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| CDS-3UTR CCA 90 bp | GACCACCACACAAATCCTGGTACACACCTGAGCCCACCCCCACACAAACTAGCAGGAAATAACATTTGTTaGAATGTAAGCGGACACATC | + |
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Preference number: 4 (lower is better) Translates to: DHHTNPGTHLSPPPHKLAGNNIC*NVSGHI Trigger: GATGTGTCCGCTTACATTCCAACAAATGTTATTTCC...TGCTAGTTTGTGTGGGGGTGGGCTCAGGTGTGTACCAGGATTTGTGTGGTGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CCA 90 bp | TTATCTATCCATGCTGACTGCACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCAAATCAGAACCAAACTaGGCAAACGCAGCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSIHADCTSKNRVREQFAKSEPN*ANAATS Trigger: GGAGGTGGCTGCGTTTGCCCAGTTTGGTTCTGATTT...GGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTGCAGTCAGCATGGATAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR TCA 90 bp | CACCTGAGCCCACCCCCACACAAACTAGCACACAGTATGGAACTTTTATTCATGATAGATCGTCATAGATaGTCAAAGCGTGCTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: HLSPPPHKLAHSMELLFMIDRHR*SKRACR Trigger: ACGGCAAGCACGCTTTGATCATCTATGACGATCTAT...CATGAATAAAAGTTCCATACTGTGTGCTAGTTTGTGTGGGGGTGGGCTCAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CCA 90 bp | CACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCGGAAATAACATTTGTTaGAATGTAAGCGGACACATC | + |
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Preference number: 4 (lower is better) Translates to: HQQEQGKRAICQLWQTDCGNNIC*NVSGHI Trigger: GATGTGTCCGCTTACATTCCAACAAATGTTATTTCC...GCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR GCA 90 bp | CCGGAGCAGAGTTCTCTTTTTAATCAATCACAAAGTACTTCCGAATTTCATAGTTCAGGCCCACTCGTCTaGGGGTCTTGGAACCAATTG | + |
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Preference number: 4 (lower is better) Translates to: PEQSSLFNQSQSTSEFHSSGPLV*GSWNQL Trigger: CAATTGGTTCCAAGACCCGCAGACGAGTGGGCCTGA...ACTATGAAATTCGGAAGTACTTTGTGATTGATTAAAAAGAGAACTCTGCTCCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR TCA 90 bp | AGAATAAATGACAAAACCAAAGCAGTATCTGGTGACAGTGACAGGGCTTTATGGTGCACCAACAAAGGATaGCCCCAAAGCATTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RINDKTKAVSGDSDRALWCTNKG*PQSIFG Trigger: TCCAAAAATGCTTTGGGGTCATCCTTTGTTGGTGCA...CCATAAAGCCCTGTCACTGTCACCAGATACTGCTTTGGTTTTGTCATTTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135678.2 |
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| CDS-3UTR GCA 90 bp | GAGCAGAGTTCTCTTTTTAATCAATCACAAAGTACTTCCGAATTTCATAGTGGAACATTCCTCAGCCCGTaGACTCGCGCAATACCATCA | + |
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Preference number: 4 (lower is better) Translates to: EQSSLFNQSQSTSEFHSGTFLSP*TRAIPS Trigger: TGATGGTATTGCGCGAGTGCACGGGCTGAGGAATGT...TCCACTATGAAATTCGGAAGTACTTTGTGATTGATTAAAAAGAGAACTCTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR TCA 90 bp | GAGCAGAGTTCTCTTTTTAATCAATCACAAAGTACTTCCGAATTTCATAGTGGAATAGATCGTCATAGATaGTCAAAGCGTGCTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: EQSSLFNQSQSTSEFHSGIDRHR*SKRACR Trigger: ACGGCAAGCACGCTTTGATCATCTATGACGATCTAT...TCCACTATGAAATTCGGAAGTACTTTGTGATTGATTAAAAAGAGAACTCTGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | CCGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCCTCTGACCACCACACAACGACAACTCCAACATaGTCGGGTTCCAAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PVEGGYCHTGWLSSDHHTTTTPT*SGSKFR Trigger: CCTGAACTTGGAACCCGACAATGTTGGAGTTGTCGT...TGTGTGGTGGTCAGAGGACAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | CACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCGACCCCAAAGCATTTTaGGAGACCAGTCCCGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: HQQEQGKRAICQLWQTDCDPKAF*ETSPAR Trigger: ACGGGCGGGACTGGTCTCCAAAAATGCTTTGGGGTC...GCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026495.15 |
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| CDS-3UTR CAA 90 bp | CACCAGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCTCGTCGGTCCCATCGTaGAAACGTTTCTGGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: HQQEQGKRAICQLWQTDCSSVPS*KRFWLM Trigger: CATCAACCAGAAACGTTTCAACGATGGGACCGACGA...GCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | AAAACCTGCATTAAATTCCCGGTGGAAGGAGGGTACTGTCATACAGGCTGGCTGTCGTCGGTCCCATCGTaGAAACGTTTCTGGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: KTCIKFPVEGGYCHTGWLSSVPS*KRFWLM Trigger: CATCAACCAGAAACGTTTCAACGATGGGACCGACGA...CAGCCAGCCTGTATGACAGTACCCTCCTTCCACCGGGAATTTAATGCAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCTACAACGACTCAAGAGCTGTaGAGTGGCAGCGTCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: SKNRVREQFASYGRQTATTTQEL*SGSVQI Trigger: GATTTGGACGCTGCCACTCAACAGCTCTTGAGTCGT...TGTAGCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGAACAGGGTAAGAGAGCAATTTGCCAGCTATGGCAGACAGACTGCTACAACGACAACTCCAACATaGTCGGGTTCCAAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SKNRVREQFASYGRQTATTTTPT*SGSKFR Trigger: CCTGAACTTGGAACCCGACAATGTTGGAGTTGTCGT...TGTAGCAGTCTGTCTGCCATAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | AATGACAAAACCAAAGCAGTATCTGGTGACAGTGACAGGGCTTTATGGTTCAAAGACCCCAAAGCATTTTaGGAGACCAGTCCCGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: NDKTKAVSGDSDRALWFKDPKAF*ETSPAR Trigger: ACGGGCGGGACTGGTCTCCAAAAATGCTTTGGGGTC...TTTGAACCATAAAGCCCTGTCACTGTCACCAGATACTGCTTTGGTTTTGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135678.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTGAATTATCTATCCATGCTGACTGCACCAGCAAGAACAGGGTAAGAGAGACTCGTCTGCGGGTCTaGGAACCAATTGGACCCTTT | + |
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Preference number: 5 (lower is better) Translates to: SFELSIHADCTSKNRVRETRLRV*EPIGPF Trigger: AAAGGGTCCAATTGGTTCCAAGACCCGCAGACGAGT...CTCTCTTACCCTGTTCTTGCTGGTGCAGTCAGCATGGATAGATAATTCAAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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| CDS-3UTR CAA 90 bp | GAATTATCTATCCATGCTGACTGCACCAGCAAGAACAGGGTAAGAGAGCAATTTACGACTCAAGAGCTGTaGAGTGGCAGCGTCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: ELSIHADCTSKNRVREQFTTQEL*SGSVQI Trigger: GATTTGGACGCTGCCACTCAACAGCTCTTGAGTCGT...AAATTGCTCTCTTACCCTGTTCTTGCTGGTGCAGTCAGCATGGATAGATAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026495.15 ENSMUST00000114748.2 |
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