Pregenerated sensors for ATP4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031449Ensembl transcript IDs: ENSMUST00000033826.4
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGCCATaGTGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: GECWAGALPGVSSGP*WKWPCMLASRGCAV Trigger: GACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATGGCCCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCCGGACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCGGAAGTGGCCGTGCATaGTGGCCAGCAGAGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GSRTLGPRVNPTAPIGLRGSGRA*WPAEAV Trigger: CACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCC...GCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGTCCGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCGGACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCCGGGGAGTGCTGGGCTaGAGCACTTCCTGGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GSRTLGPRVNPTAPIGLRRGVLG*STSWCQ Trigger: CTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCG...GCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGTCCGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| 3UTR TCA 72 bp | TGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGCCATaGTGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: WAGALPGVSSGP*WKWPCMLASRG Trigger: GCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATGGCCCAGAGCTGACACCAGGAAGTGCTCCAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| 3UTR GCA 72 bp | ATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTaGAGTCAGGAAGAGTGTCCATCCGTGTCCACCCAT | + |
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Preference number: 3 (lower is better) Translates to: MEVAVHAGQQRL*SQEECPSVSTH Trigger: ATGGGTGGACACGGATGGACACTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| 3UTR GCA 72 bp | ACTGTGGTCTCAGAAGCACGAACTGGAGATGTGTCATaGCAGGGTGACCAGTGTTACCCTGATGTGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: TVVSEARTGDVS*QGDQCYPDVDP Trigger: TGGGTCCACATCAGGGTAACACTGGTCACCCTGGCATGACACATCTCCAGTTCGTGCTTCTGAGACCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | ACAGATAGGCCTTCCTTAGTGGCAGCCGGACTCTGGGTCCCCGTGTTAACCCCACCCACCGGGCTGGGGTaGGGCCCAGCATTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TDRPSLVAAGLWVPVLTPPTGLG*GPAFAQ Trigger: CTGGGCAAATGCTGGGCCGCACCCCAGCCCGGTGGG...TGGGGTTAACACGGGGACCCAGAGTCCGGCTGCCACTAAGGAAGGCCTATCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GGTGATACTCGGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGCCGTGCGGCCCAGCATTTaGCCAGTGTCCGGGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GDTRGVLGWSTSWCQLWAVRPSI*PVSGFQ Trigger: TTGGAACCCGGACACTGGGCAAATGCTGGGCCGCAC...GGCCCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCGAGTATCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GTTGGTGATACTCGGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGCGGCCATGCGCTGGCTaGATGACTTCTTCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VGDTRGVLGWSTSWCQLWRPCAG*MTSSPA Trigger: TGCAGGAGAAGAAGTCATGCAGCCAGCGCATGGCCG...CCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCGAGTATCACCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGAGTGTCCGTTGAGGAGCTTGGCTaGCACCAGAGGGTTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: GSGRACWPAEAVQSGRVSVEELG*HQRVAV Trigger: TACAGCAACCCTCTGGTGGCAGCCAAGCTCCTCAAC...GGACACTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR TCA 90 bp | GGCAGCCGGACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCTCTTGCACACGATGCTaGCTTGCATGTTCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRTLGPRVNPTAPIGLRSCTRC*LACSWG Trigger: TCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGA...GCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGTCCGGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | CATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGACTGCCACCAGAGGGTTaGTGTAGTGGGGCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HDGSGRACWPAEAVQSGRLPPEG*CSGAVL Trigger: AAGCACAGCCCCACTACAGCAACCCTCTGGTGGCAG...TCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CCA 90 bp | GGCAGCCGGACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCTTGTTGAAGGTCACGTaGTCTGCCAGGATCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GSRTLGPRVNPTAPIGLRLLKVT*SARILH Trigger: GTGCAAGATCCTGGCAGACCACGTGACCTTCAACAA...GCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGTCCGGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GGTGATACTCGGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGCCGGGGCTGTGCTTTCTTaGCATAGTAGGGGAAATAGT | + |
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Preference number: 4 (lower is better) Translates to: GDTRGVLGWSTSWCQLWAGAVLS*HSRGNS Trigger: ACTATTTCCCCTACTATGGCAAGAAAGCACAGCCCC...GGCCCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCGAGTATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGAGTGTCCGGGTGTAGGGGTCAATaGTCTGCATCAGCACATAGA | + |
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Preference number: 4 (lower is better) Translates to: GSGRACWPAEAVQSGRVSGCRGQ*SASAHR Trigger: TCTATGTGCTGATGCAGACCATTGACCCCTACACCC...GGACACTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CCA 90 bp | GGTGATACTCGGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGCCACTTGCAGGAGAACTTaGTGTGGTTTGGAGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GDTRGVLGWSTSWCQLWATCRRT*CGLELQ Trigger: TTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGT...GGCCCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCGAGTATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CCA 90 bp | GCAAATGATCACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCCCTCGAAGCCGAAGCTaGGGTCCGCCAGGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ANDHRTEMWTDRPSLVAAPRSRS*GPPGLS Trigger: GCTCAGGCCTGGCGGACCCCAGCTTCGGCTTCGAGG...GGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTGATCATTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GTTGGTGATACTCGGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGGTGTGGTTTGGAGCTaGAAAGCTCTCCTGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VGDTRGVLGWSTSWCQLWGVVWS*KALLEE Trigger: TTCTTCCAGGAGAGCTTTGCAGCTCCAAACCACACC...CCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCGAGTATCACCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR TCA 90 bp | ACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCTCACGTGAGGTAGCATGTCTGCAGTaGACTTGCAGGAGAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: TLGPRVNPTAPIGLRSREVACLQ*TCRRTW Trigger: CCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTAC...CTCACGTGAGCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | CACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCGGACTCTGGCCTGCTAAGAAGCTGTaGAGGGTGTGTGTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HRTEMWTDRPSLVAAGLWPAKKL*RVCVRP Trigger: TGGCCTCACACACACCCTGCACAGCTTCTTAGCAGG...CCAGAGTCCGGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CCA 90 bp | ACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCTCACGTGAGGAACTTGGTGTGGTTTaGAGCTGCAAAGCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TLGPRVNPTAPIGLRSREELGVV*SCKALL Trigger: CAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTC...CTCACGTGAGCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CCA 90 bp | CATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGACAGGAGAACTTGGTGTaGTTTGGAGCTGCAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: HDGSGRACWPAEAVQSGRQENLV*FGAAKL Trigger: GAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTG...TCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR TCA 90 bp | GCAAATGATCACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCCATGCGCTGGCTGCATaGCTTCTTCTCCTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ANDHRTEMWTDRPSLVAAHALAA*LLLLQG Trigger: GCCCTGCAGGAGAAGAAGTCATGCAGCCAGCGCATG...GGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTGATCATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR TCA 90 bp | CATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGATTTCAGATGTACAGTTaGTGCTGTCCTGCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: HDGSGRACWPAEAVQSGRFQMYS*CCPAGM Trigger: CATCCCAGCAGGACAGCATCAACTGTACATCTGAAA...TCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GCAAATGATCACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCGCATCAGCACATAGATaGACAAGGCAAAGAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ANDHRTEMWTDRPSLVAAASAHR*TRQRAR Trigger: CCGGGCTCTTTGCCTTGTGCATCTATGTGCTGATGC...GGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTGATCATTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GCAAATGATCACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCGAAGGTCACGTGGTCTaGCAGGATCTTGCACACGAT | + |
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Preference number: 4 (lower is better) Translates to: ANDHRTEMWTDRPSLVAAEGHVV*QDLAHD Trigger: ATCGTGTGCAAGATCCTGGCAGACCACGTGACCTTC...GGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTGATCATTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | CATATTGAAGTGCAGGACGGGCAAATGATCACAGGACAGAAATGTGGACAGATAGATCATCCTGGAAGGTaGAGTCCACTCGGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HIEVQDGQMITGQKCGQIDHPGR*SPLGEL Trigger: CAGCTCCCCGAGTGGACTGCACCTTCCAGGATGATC...TATCTGTCCACATTTCTGTCCTGTGATCATTTGCCCGTCCTGCACTTCAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR GCA 90 bp | GCAAATGATCACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCGACCACATAGAAACCTaGGTAGTACAGGCTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: ANDHRTEMWTDRPSLVAADHIET*VVQADP Trigger: TGGATCAGCCTGTACTACGCAGGTTTCTATGTGGTC...GGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTGATCATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | ATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGAGGGTGCGGCCCAGCATTaGCCCAGTGTCCGGGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: MMEVAVHAGQQRLCSQEEGAAQH*PSVRVP Trigger: TGGAACCCGGACACTGGGCAAATGCTGGGCCGCACC...CTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | ATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGAGGGGACGTTGAGGAGCTaGGCTGCCACCAGAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: MMEVAVHAGQQRLCSQEEGTLRS*AATRGL Trigger: CAACCCTCTGGTGGCAGCCAAGCTCCTCAACGTCCC...CTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | GTTGGTGATACTCGGGGAGTGCTGGGCTGGAGCACTTCCTGGTGTCAGCTCTGGGGGTCATGGGGGTTGTaGAAGGTCACGTGGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VGDTRGVLGWSTSWCQLWGSWGL*KVTWSA Trigger: GGCAGACCACGTGACCTTCAACAACCCCCATGACCC...CCAGAGCTGACACCAGGAAGTGCTCCAGCCCAGCACTCCCCGAGTATCACCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | GGCCATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGATGGTCTGCCAGGATCTaGCACACGATGCTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: GHDGSGRACWPAEAVQSGWSARI*HTMLTC Trigger: GCAAGTCAGCATCGTGTGCAAGATCCTGGCAGACCA...TCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATGGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS GCA 90 bp | ATAGATGCACAAGGCAAAGAGCCCGGTCATGACCACATAGAAACCTaGGTAGTACAGGCTGATCCACACCCACCGGGCTGGGGTGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: IDAQGKEPGHDHIET*VVQADPHPPGWGAA Trigger: GGCCGCACCCCAGCCCGGTGGGTGTGGATCAGCCTGTACTACGCAGGTTTCTATGTGGTCATGACCGGGCTCTTTGCCTTGTGCATCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | ATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGAGCGGGGAGCTGTGTTGTaGCTGGGGAGGAACTTGACA | + |
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Preference number: 5 (lower is better) Translates to: MMEVAVHAGQQRLCSQEERGAVL*LGRNLT Trigger: TGTCAAGTTCCTCCCCAGCAACAACACAGCTCCCCG...CTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | ATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGAGATGTTCTTGGGGACGTaGAGGAGCTTGGCTGCCACC | + |
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Preference number: 5 (lower is better) Translates to: MMEVAVHAGQQRLCSQEEMFLGT*RSLAAT Trigger: GGTGGCAGCCAAGCTCCTCAACGTCCCCAAGAACAT...CTCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS GCA 90 bp | TTGAAGGTCACGTGGTCTGCCAGGATCTTGCACACGATGCTGACTTaGATGTTCTTGGGGACGTTGAGGAGCTTGGCTGCCACCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LKVTWSARILHTMLT*MFLGTLRSLAATRG Trigger: CCCTCTGGTGGCAGCCAAGCTCCTCAACGTCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGATCCTGGCAGACCACGTGACCTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | AGCCGGACTCTGGGTCCCCGTGTTAACCCCACAGCTCCGATAGGATTGCGCTCAATGTCTGCAGTGAACTaGCAGGAGAACTTGGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SRTLGPRVNPTAPIGLRSMSAVN*QENLVW Trigger: CCACACCAAGTTCTCCTGCAAGTTCACTGCAGACAT...TGAGCGCAATCCTATCGGAGCTGTGGGGTTAACACGGGGACCCAGAGTCCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | ACAGATAGGCCTTCCTTAGTGGCAGCCGGACTCTGGGTCCCCGTGTTAACCCCAAACTTGCAGGAGAACTaGGTGTGGTTTGGAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: TDRPSLVAAGLWVPVLTPNLQEN*VWFGAA Trigger: TGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTT...TGGGGTTAACACGGGGACCCAGAGTCCGGCTGCCACTAAGGAAGGCCTATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS TCA 90 bp | AGCTGGGGTCCGCCAGGCCTGAGCAGTTTTGTAGCATGTCTGCAGTaGACTTGCAGGAGAACTTGGTGTGGTTTGGAGCTGCAAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SWGPPGLSSFVACLQ*TCRRTWCGLELQSS Trigger: AGAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTACAAAACTGCTCAGGCCTGGCGGACCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 90 bp | CTGGTGACTTTAACTGGTCCTGGTAGTCTGGGGTGTAGGGGTCAATaGTCTGCATCAGCACATAGATGCACAAGGCAAAGAGCCCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LVTLTGPGSLGCRGQ*SASAHRCTRQRARS Trigger: TGACCGGGCTCTTTGCCTTGTGCATCTATGTGCTGATGCAGACCATTGACCCCTACACCCCAGACTACCAGGACCAGTTAAAGTCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | GCAAATGATCACAGGACAGAAATGTGGACAGATAGGCCTTCCTTAGTGGCAGCCGTCCTTCCGGGGCTTTaGGGGATCATCCTGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: ANDHRTEMWTDRPSLVAAVLPGL*GIILEG Trigger: ACCTTCCAGGATGATCCCCAAAAGCCCCGGAAGGAC...GGCTGCCACTAAGGAAGGCCTATCTGTCCACATTTCTGTCCTGTGATCATTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | CATGATGGAAGTGGCCGTGCATGCTGGCCAGCAGAGGCTGTGCAGTCAGGAAGATTGCTGGGGAGGAACTaGACAATTCTGTTCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: HDGSGRACWPAEAVQSGRLLGRN*TILFIL Trigger: TAAAATGAACAGAATTGTCAAGTTCCTCCCCAGCAA...TCTTCCTGACTGCACAGCCTCTGCTGGCCAGCATGCACGGCCACTTCCATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS TCA 90 bp | GAGCTGCAAAGCTCTCCTGGAAGAAGTACTTTTCAGATGTACAGTTaGTGCTGTCCTGCTGGGATGCTGGGGTATAGCCTGCTAAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ELQSSPGRSTFQMYS*CCPAGMLGYSLLRS Trigger: GCTTCTTAGCAGGCTATACCCCAGCATCCCAGCAGGACAGCATCAACTGTACATCTGAAAAGTACTTCTTCCAGGAGAGCTTTGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | CATATTGAAGTGCAGGACGGGCAAATGATCACAGGACAGAAATGTGGACAGATAACTCGGGGAGCTGTGTaGTTGCTGGGGAGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: HIEVQDGQMITGQKCGQITRGAV*LLGRNL Trigger: CAAGTTCCTCCCCAGCAACAACACAGCTCCCCGAGT...TATCTGTCCACATTTCTGTCCTGTGATCATTTGCCCGTCCTGCACTTCAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 90 bp | AACTTGCAGGAGAACTTGGTGTGGTTTGGAGCTGCAAAGCTCTCCTaGAAGAAGTACTTTTCAGATGTACAGTTGATGCTGTCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NLQENLVWFGAAKLS*KKYFSDVQLMLSCW Trigger: CCAGCAGGACAGCATCAACTGTACATCTGAAAAGTACTTCTTCCAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS-3UTR CAA 90 bp | CATATTGAAGTGCAGGACGGGCAAATGATCACAGGACAGAAATGTGGACAGATAAGAACTTGGTGTGGTTaGGAGCTGCAAAGCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HIEVQDGQMITGQKCGQIRTWCG*ELQSSP Trigger: AGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCT...TATCTGTCCACATTTCTGTCCTGTGATCATTTGCCCGTCCTGCACTTCAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 90 bp | CAGTTTTGTAGCATGTCTGCAGTGAACTTGCAGGAGAACTTGGTGTaGTTTGGAGCTGCAAAGCTCTCCTGGAAGAAGTACTTTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: QFCSMSAVNLQENLV*FGAAKLSWKKYFSD Trigger: ATCTGAAAAGTACTTCTTCCAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTACAAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 72 bp | ACCTGCGTAGTACAGGCTGATCCACACCCACCGGGCTaGGGTGCGGCCCAGCATTTGCCCAGTGTCCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: TCVVQADPHPPG*GAAQHLPSVRV Trigger: AACCCGGACACTGGGCAAATGCTGGGCCGCACCCCAGCCCGGTGGGTGTGGATCAGCCTGTACTACGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 90 bp | GTACAGGCTGATCCACACCCACCGGGCTGGGGTGCGGCCCAGCATTaGCCCAGTGTCCGGGTTCCAACAGTAGTGCCGGAATTCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VQADPHPPGWGAAQH*PSVRVPTVVPEFGH Trigger: ATGGCCGAATTCCGGCACTACTGTTGGAACCCGGACACTGGGCAAATGCTGGGCCGCACCCCAGCCCGGTGGGTGTGGATCAGCCTGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS GCA 72 bp | TGTCCGGGTTCCAACAGTAGTGCCGGAATTCGGCCATaGGCTGGCTGCATGACTTCTTCTCCTGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CPGSNSSAGIRP*AGCMTSSPAGL Trigger: CAGCCCTGCAGGAGAAGAAGTCATGCAGCCAGCGCATGGCCGAATTCCGGCACTACTGTTGGAACCCGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS GCA 72 bp | CAAGGCAAAGAGCCCGGTCATGACCACATAGAAACCTaGGTAGTACAGGCTGATCCACACCCACCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QGKEPGHDHIET*VVQADPHPPGW Trigger: CCAGCCCGGTGGGTGTGGATCAGCCTGTACTACGCAGGTTTCTATGTGGTCATGACCGGGCTCTTTGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 72 bp | GCCAGGATCTTGCACACGATGCTGACTTGCATGTTCTaGGGGACGTTGAGGAGCTTGGCTGCCACCAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: ARILHTMLTCMF*GTLRSLAATRG Trigger: CCCTCTGGTGGCAGCCAAGCTCCTCAACGTCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGATCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 90 bp | GTTGAAGGTCACGTGGTCTGCCAGGATCTTGCACACGATGCTGACTaGCATGTTCTTGGGGACGTTGAGGAGCTTGGCTGCCACCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VEGHVVCQDLAHDAD*HVLGDVEELGCHQR Trigger: CCTCTGGTGGCAGCCAAGCTCCTCAACGTCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGATCCTGGCAGACCACGTGACCTTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS TCA 72 bp | ACTCCACCTTCCCTTCGTAGGGGTCATGGGGGTTGTTaGAGGTCACGTGGTCTGCCAGGATCTTGCACACGA | + |
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Preference number: 6 (lower is better) Translates to: TPPSLRRGHGGC*RSRGLPGSCTR Trigger: TCGTGTGCAAGATCCTGGCAGACCACGTGACCTTCAACAACCCCCATGACCCCTACGAAGGGAAGGTGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS GCA 72 bp | ACGTGGTCTGCCAGGATCTTGCACACGATGCTGACTTaGATGTTCTTGGGGACGTTGAGGAGCTTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TWSARILHTMLT*MFLGTLRSLAA Trigger: GGCAGCCAAGCTCCTCAACGTCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGATCCTGGCAGACCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 72 bp | CACGTGGTCTGCCAGGATCTTGCACACGATGCTGACTaGCATGTTCTTGGGGACGTTGAGGAGCTTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: HVVCQDLAHDAD*HVLGDVEELGC Trigger: GCAGCCAAGCTCCTCAACGTCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGATCCTGGCAGACCACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 90 bp | GGGTCCGCCAGGCCTGAGCAGTTTTGTAGCATGTCTGCAGTGAACTaGCAGGAGAACTTGGTGTGGTTTGGAGCTGCAAAGCTCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSARPEQFCSMSAVN*QENLVWFGAAKLSW Trigger: CCAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTACAAAACTGCTCAGGCCTGGCGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 72 bp | TGGGGGTTGTTGAAGGTCACGTGGTCTGCCAGGATCTaGCACACGATGCTGACTTGCATGTTCTTGGGGACG | + |
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Preference number: 6 (lower is better) Translates to: WGLLKVTWSARI*HTMLTCMFLGT Trigger: CGTCCCCAAGAACATGCAAGTCAGCATCGTGTGCAAGATCCTGGCAGACCACGTGACCTTCAACAACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS TCA 72 bp | CCGCCAGGCCTGAGCAGTTTTGTAGCATGTCTGCAGTaGACTTGCAGGAGAACTTGGTGTGGTTTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PPGLSSFVACLQ*TCRRTWCGLEL Trigger: CAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTACAAAACTGCTCAGGCCTGGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS GCA 72 bp | CTTGGCTGCCACCAGAGGGTTGCTGTAGTGGGGCTGTaGTTTCTTGCCATAGTAGGGGAAATAGTGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: LGCHQRVAVVGL*FLAIVGEIVET Trigger: AGTCTCCACTATTTCCCCTACTATGGCAAGAAAGCACAGCCCCACTACAGCAACCCTCTGGTGGCAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 72 bp | TCATCCTGGAAGGTGCAGTCCACTCGGGGAGCTGTGTaGTTGCTGGGGAGGAACTTGACAATTCTGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SSWKVQSTRGAV*LLGRNLTILFI Trigger: AATGAACAGAATTGTCAAGTTCCTCCCCAGCAACAACACAGCTCCCCGAGTGGACTGCACCTTCCAGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 72 bp | TTAACTGGTCCTGGTAGTCTGGGGTGTAGGGGTCAATaGTCTGCATCAGCACATAGATGCACAAGGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LTGPGSLGCRGQ*SASAHRCTRQR Trigger: TCTTTGCCTTGTGCATCTATGTGCTGATGCAGACCATTGACCCCTACACCCCAGACTACCAGGACCAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 72 bp | AGGCCTGAGCAGTTTTGTAGCATGTCTGCAGTGAACTaGCAGGAGAACTTGGTGTGGTTTGGAGCTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RPEQFCSMSAVN*QENLVWFGAAK Trigger: CTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTACAAAACTGCTCAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 72 bp | GTCTGCAGTGAACTTGCAGGAGAACTTGGTGTGGTTTaGAGCTGCAAAGCTCTCCTGGAAGAAGTACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VCSELAGELGVV*SCKALLEEVLF Trigger: GAAAAGTACTTCTTCCAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CAA 90 bp | CCTGAGCAGTTTTGTAGCATGTCTGCAGTGAACTTGCAGGAGAACTaGGTGTGGTTTGGAGCTGCAAAGCTCTCCTGGAAGAAGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: PEQFCSMSAVNLQEN*VWFGAAKLSWKKYF Trigger: AAAGTACTTCTTCCAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCTCCTGCAAGTTCACTGCAGACATGCTACAAAACTGCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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| CDS CCA 72 bp | GAGAACTTGGTGTGGTTTGGAGCTGCAAAGCTCTCCTaGAAGAAGTACTTTTCAGATGTACAGTTGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: ENLVWFGAAKLS*KKYFSDVQLML Trigger: CAGCATCAACTGTACATCTGAAAAGTACTTCTTCCAGGAGAGCTTTGCAGCTCCAAACCACACCAAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033826.4 |
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