Pregenerated sensors for ATP2B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019943Ensembl transcript IDs: ENSMUST00000020107.8, ENSMUST00000218948.2, ENSMUST00000219090.2, ENSMUST00000219557.2, ENSMUST00000219624.2, ENSMUST00000220104.2, ENSMUST00000220124.2
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTaGCGACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTG | + |
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Preference number: 1 (lower is better) Translates to: EINHSSASQDNVRYH*RPTGHSCRVTAVHL Trigger: CAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR GCA 90 bp | GGGTTCTTCAAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTCACTaGCCCAAGATCATGCAGCACGTTAATGGCAAATTCAAGACGAGG | + |
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Preference number: 1 (lower is better) Translates to: GFFKRSPPPSVRVSH*PKIMQHVNGKFKTR Trigger: CCTCGTCTTGAATTTGCCATTAACGTGCTGCATGATCTTGGGGCAGTGACTCACCCTGACGGAGGGTGGGGGACTCCTCTTGAAGAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR TCA 90 bp | TCAGCATTCTTGGATGTAGTAGTCCTCGTAAACTTTAGGTCAGCCTaGGGATTGTTTAACTGGCGAGATCTGCGCCCTGAAACAATACCA | + |
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Preference number: 1 (lower is better) Translates to: SAFLDVVVLVNFRSA*GLFNWRDLRPETIP Trigger: TGGTATTGTTTCAGGGCGCAGATCTCGCCAGTTAAACAATCCTCAGGCTGACCTAAAGTTTACGAGGACTACTACATCCAAGAATGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR CCA 90 bp | AACATTTCCCTTTCTCTATTCCCTATGCCTCACAGGCTTCTTCAGTaGATAGGGTCAATTCTTAGAGTTGAAAGGGTTCTTCAAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: NISLSLFPMPHRLLQ*IGSILRVERVLQEE Trigger: CTCCTCTTGAAGAACCCTTTCAACTCTAAGAATTGACCCTATCCACTGAAGAAGCCTGTGAGGCATAGGGAATAGAGAAAGGGAAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR TCA 90 bp | TTGTCCCCTAGAACGCAGGACTGTGTTGCTTCTGAACAGCATTACTaGGGCATGGACCCTAACAACAAATGTATATTCTATATGTATTGG | + |
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Preference number: 1 (lower is better) Translates to: LSPRTQDCVASEQHY*GMDPNNKCIFYMYW Trigger: CCAATACATATAGAATATACATTTGTTGTTAGGGTCCATGCCTCAGTAATGCTGTTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR GCA 90 bp | GAAATTACAGTGTCTCAAAGAGAGAAACGCACACCGAGCGTGTTTTaGTATTATGACTTCACGGATGTCCTAAGACCCACTTATGGATTT | + |
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Preference number: 1 (lower is better) Translates to: EITVSQREKRTPSVF*YYDFTDVLRPTYGF Trigger: AAATCCATAAGTGGGTCTTAGGACATCCGTGAAGTCATAATAGCAAAACACGCTCGGTGTGCGTTTCTCTCTTTGAGACACTGTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR TCA 90 bp | TACAGTATGAATAACTACAAACACCTGATGAGTAAAAATGTACAGTaGTCGATGGGACAGAGCCGATGTGTTTCTAAGACTTGCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: YSMNNYKHLMSKNVQ*SMGQSRCVSKTCRE Trigger: CTCTCTGCAAGTCTTAGAAACACATCGGCTCTGTCCCATCGATCACTGTACATTTTTACTCATCAGGTGTTTGTAGTTATTCATACTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR CCA 90 bp | GGCTCTGAATCTTCTATCCTAAACTCAGGGTGTGTCATAAAGTTGTaGATTGAACTTCTTGATTCTGGCTTCTCTAACCCTTCGTATAAA | + |
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Preference number: 1 (lower is better) Translates to: GSESSILNSGCVIKL*IELLDSGFSNPSYK Trigger: TTTATACGAAGGGTTAGAGAAGCCAGAATCAAGAAGTTCAATCCACAACTTTATGACACACCCTGAGTTTAGGATAGAAGATTCAGAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR TCA 90 bp | GTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTaGAAAGACTCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: VEVQRQEYYLVRHNM*KDSVSICFFTMQLV Trigger: CACTAGCTGCATTGTAAAGAAACAAATCGAAACTGAGTCTTTTCACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR-3UTR TCA 90 bp | ACGACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCCTCCCATCAAGAACTaGGATAAACCACAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TTHRPLLPSHRCSSVSSFPPIKN*DKPQLC Trigger: GCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGG...AAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACAAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QATPAESPLFICQFVSPTKAPSV*QKALLL Trigger: CAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR CAA 90 bp | CCTTTCCAGAACCACCACTCTTGTCCCCTAGAACGCAGGACTGTGTaGCTTCTGAACAGCATTACTGAGGCATGGACCCTAACAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: PFQNHHSCPLERRTV*LLNSITEAWTLTTN Trigger: ATTTGTTGTTAGGGTCCATGCCTCAGTAATGCTGTTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAAGAGTGGTGGTTCTGGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACGTCCGTCACAATATGTaGAAAGACTCAGTTTCGATT | + |
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Preference number: 2 (lower is better) Translates to: VSPSVTPPSLPSRTEINHVRHNM*KDSVSI Trigger: AATCGAAACTGAGTCTTTTCACATATTGTGACGGAC...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAGTCCGTCACAATATGTaGAAAGACTCAGTTTCGATT | + |
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Preference number: 2 (lower is better) Translates to: LLPSHRCSSVSSFLPHPKVRHNM*KDSVSI Trigger: AATCGAAACTGAGTCTTTTCACATATTGTGACGGAC...TTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTTGTACCATCACCCGTTACAGCTACAACCTGTCGTTGCTCTGAGACTGTGTCAGGAGGCAGAACATaGCCCTGTGTTAGGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: SFVPSPVTATTCRCSETVSGGRT*PCVRKL Trigger: CAGTTTCCTAACACAGGGTCATGTTCTGCCTCCTGA...CACAGTCTCAGAGCAACGACAGGTTGTAGCTGTAACGGGTGATGGTACAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTCCGTCACAATATGTaGAAAGACTCAGTTTCGATT | + |
|
Preference number: 2 (lower is better) Translates to: PSLPSRTEINHSSASQDNVRHNM*KDSVSI Trigger: AATCGAAACTGAGTCTTTTCACATATTGTGACGGAC...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR CAA 90 bp | CATAAAACATCTTGTAAGACACAAGCCTTTCCAGAACCACCACTCTaGTCCCCTAGAACGCAGGACTGTGTTGCTTCTGAACAGCATTAC | + |
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Preference number: 2 (lower is better) Translates to: HKTSCKTQAFPEPPL*SPRTQDCVASEQHY Trigger: GTAATGCTGTTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAAGAGTGGTGGTTCTGGAAAGGCTTGTGTCTTACAAGATGTTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTTGTACCATCACCCGTTACAGCTACAACCTGTCGTTGCTCTGAGACTGTGCTGTCTTGGTGGCTCTaGTTTCTGTACAAGTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SFVPSPVTATTCRCSETVLSWWL*FLYKFE Trigger: TTCAAACTTGTACAGAAATCAGAGCCACCAAGACAG...CACAGTCTCAGAGCAACGACAGGTTGTAGCTGTAACGGGTGATGGTACAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCCGTGGTTCCTTACTCATGGTCCAAAGACCTGGGACTTGTCACGTTTACCGGATGTATCAATCTATaGATTAACACACTGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SPVVPYSWSKDLGLVTFTGCINL*INTLSW Trigger: CCAAGACAGTGTGTTAATGCATAGATTGATACATCC...GGTAAACGTGACAAGTCCCAGGTCTTTGGACCATGAGTAAGGAACCACGGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCACCCAGCAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QQKLKYSLNDPGLSVSPSKAPSV*QKALLL Trigger: CAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...GCTGGGTGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
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| 3UTR CAA 90 bp | TGCGGCTCTGAATCTTCTATCCTAAACTCAGGGTGTGTCATAAAGTaGTGGATTGAACTTCTTGATTCTGGCTTCTCTAACCCTTCGTAT | + |
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Preference number: 2 (lower is better) Translates to: CGSESSILNSGCVIK*WIELLDSGFSNPSY Trigger: ATACGAAGGGTTAGAGAAGCCAGAATCAAGAAGTTCAATCCACAACTTTATGACACACCCTGAGTTTAGGATAGAAGATTCAGAGCCGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCTTACAATCAGAGTGATGTTTCCAAACTATGTAGTGGGCTTCCTGGGGATATTTCTATTGTAAGGTaGATTCCGCTGTCAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: SSYNQSDVSKLCSGLPGDISIVR*IPLSTA Trigger: TGCTGTTGACAGCGGAATTCACCTTACAATAGAAAT...ATCCCCAGGAAGCCCACTACATAGTTTGGAAACATCACTCTGATTGTAAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGACTCAATTTAATAGTCAGGATTGTTTGAACTTCAGGAGGCAGAACATGTCCAAATCAGCTAGCTaGCATATTCACCCGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: FVTQFNSQDCLNFRRQNMSKSAS*HIHPWF Trigger: GAACCACGGGTGAATATGGCAGCTAGCTGATTTGGA...CATGTTCTGCCTCCTGAAGTTCAAACAATCCTGACTATTAAATTGAGTCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGACTCAATTTAATAGTCAGGATTGTTTGAACTTCAGGAGGCAGAACATGTGCCATATTCACCCGTaGTTCCTTACTCATGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: FVTQFNSQDCLNFRRQNMCHIHP*FLTHGP Trigger: TGGACCATGAGTAAGGAACCACGGGTGAATATGGCA...CATGTTCTGCCTCCTGAAGTTCAAACAATCCTGACTATTAAATTGAGTCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTAAGTGTGTCTTCTGTTaGAGTCCAGAGACAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVKCVFC*SPETRI Trigger: TATTCTTGTCTCTGGACTTCAACAGAAGACACACTT...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR-3UTR GCA 90 bp | ATTACAGTGTCTCAAAGAGAGAAACGCACACCGAGCGTGTTTTGCTATTATGACTCATTAGAACACCACTaGTCATGGTTTTTGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: ITVSQREKRTPSVFCYYDSLEHH*SWFLLF Trigger: AAACAACAAAAACCATGAGCAGTGGTGTTCTAATGA...GTCATAATAGCAAAACACGCTCGGTGTGCGTTTCTCTCTTTGAGACACTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAGACTCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: KRLSFDLFLYNAASVLPFKAPSV*QKALLL Trigger: CAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...GAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGAGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTAAGTGTGTCTTCTGTTaGAGTCCAGAGACAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: YIRTSVSSVEVQRQEYYLKCVFC*SPETRI Trigger: TATTCTTGTCTCTGGACTTCAACAGAAGACACACTT...AAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGACTCAATTTAATAGTCAGGATTGTTTGAACTTCAGGAGGCAGAACATGGTGTATGTTTGTCAGTaGGAGATGATCTTGCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: FVTQFNSQDCLNFRRQNMVYVCQ*EMILQV Trigger: TACTTGCAAGATCATCTCCCACTGACAAACATACAC...CATGTTCTGCCTCCTGAAGTTCAAACAATCCTGACTATTAAATTGAGTCACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR GCA 72 bp | AAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTCACTaGCCCAAGATCATGCAGCACGTTAATGGCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: KRSPPPSVRVSH*PKIMQHVNGKF Trigger: GAATTTGCCATTAACGTGCTGCATGATCTTGGGGCAGTGACTCACCCTGACGGAGGGTGGGGGACTCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR CCA 72 bp | GCTAGGTGGCAAAACTGCTGTCTCAGCTCGACTCCATaGGGTGACCAAGAAAGGATTCAAACAGCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ARWQNCCLSSTP*GDQERIQTALP Trigger: AGGAAGGGCTGTTTGAATCCTTTCTTGGTCACCCCATGGAGTCGAGCTGAGACAGCAGTTTTGCCACCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR CCA 72 bp | CTCAGTTCCAAATCAGCTAGCTGCCATATTCACCCGTaGTTCCTTACTCATGGTCCAAAGACCTGGGACTTG | + |
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Preference number: 3 (lower is better) Translates to: LSSKSASCHIHP*FLTHGPKTWDL Trigger: CAAGTCCCAGGTCTTTGGACCATGAGTAAGGAACCACGGGTGAATATGGCAGCTAGCTGATTTGGAACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGTTGAAAGGGTTCTTCAAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTCAAGTGTGTCTTCTGTaGAAGTCCAGAGACAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: LELKGFFKRSPPPSVRVSQVCLL*KSRDKN Trigger: ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTG...ACTCACCCTGACGGAGGGTGGGGGACTCCTCTTGAAGAACCCTTTCAACTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAACAAGTGTGTCTTCTGTaGAAGTCCAGAGACAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKQVCLL*KSRDKN Trigger: ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTG...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGTGTGGATTGAACTTCTaGATTCTGGCTTCTCTAACC | + |
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Preference number: 3 (lower is better) Translates to: TPPSLPSRTEINHSSASQCGLNF*ILASLT Trigger: GGTTAGAGAAGCCAGAATCAAGAAGTTCAATCCACA...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PSLPSRTEINHSSASQDNEEVAD*FISIVR Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR TCA 72 bp | TTGGATGTAGTAGTCCTCGTAAACTTTAGGTCAGCCTaGGGATTGTTTAACTGGCGAGATCTGCGCCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LDVVVLVNFRSA*GLFNWRDLRPE Trigger: TTCAGGGCGCAGATCTCGCCAGTTAAACAATCCTCAGGCTGACCTAAAGTTTACGAGGACTACTACATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR GCA 72 bp | GTGTCTCAAAGAGAGAAACGCACACCGAGCGTGTTTTaGTATTATGACTTCACGGATGTCCTAAGACCCACT | + |
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Preference number: 3 (lower is better) Translates to: VSQREKRTPSVF*YYDFTDVLRPT Trigger: AGTGGGTCTTAGGACATCCGTGAAGTCATAATAGCAAAACACGCTCGGTGTGCGTTTCTCTCTTTGAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR TCA 72 bp | TCTTGGGCGTGGCCTCAGGTCAACAGTAAATATTCCTaGCTGGGATGTATCAATCTATGCATTAACACACTG | + |
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Preference number: 3 (lower is better) Translates to: SWAWPQVNSKYS*LGCINLCINTL Trigger: CAGTGTGTTAATGCATAGATTGATACATCCCAGTCAGGAATATTTACTGTTGACCTGAGGCCACGCCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR GCA 72 bp | TTAGGTCAGCCTGAGGATTGTTTAACTGGCGAGATCTaGGCCCTGAAACAATACCACTTTCTAAAAGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: LGQPEDCLTGEI*ALKQYHFLKGQ Trigger: TTGACCTTTTAGAAAGTGGTATTGTTTCAGGGCGCAGATCTCGCCAGTTAAACAATCCTCAGGCTGACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR-3UTR CAA 90 bp | TACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTTGGAGTTGCGTTTTGTaGGGGCGTCGTCTTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: YIRTSVSSVEVQRQEYYLWSCVL*GRRLQH Trigger: ATGCTGAAGACGACGCCCCAACAAAACGCAACTCCA...AAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR TCA 72 bp | AGAACGCAGGACTGTGTTGCTTCTGAACAGCATTACTaGGGCATGGACCCTAACAACAAATGTATATTCTAT | + |
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Preference number: 3 (lower is better) Translates to: RTQDCVASEQHY*GMDPNNKCIFY Trigger: ATAGAATATACATTTGTTGTTAGGGTCCATGCCTCAGTAATGCTGTTCAGAAGCAACACAGTCCTGCGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR CCA 72 bp | TCTTCTATCCTAAACTCAGGGTGTGTCATAAAGTTGTaGATTGAACTTCTTGATTCTGGCTTCTCTAACCCT | + |
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Preference number: 3 (lower is better) Translates to: SSILNSGCVIKL*IELLDSGFSNP Trigger: AGGGTTAGAGAAGCCAGAATCAAGAAGTTCAATCCACAACTTTATGACACACCCTGAGTTTAGGATAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGTGACTGAATCGCTACATAAAATGATGACATTCAGGTACTCTTTAAAAGCCAATAGTCAGGATTGTTaGAACTTCAGGAGGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KVTESLHKMMTFRYSLKANSQDC*NFRRQN Trigger: GTTCTGCCTCCTGAAGTTCAAACAATCCTGACTATT...GGCTTTTAAAGAGTACCTGAATGTCATCATTTTATGTAGCGATTCAGTCACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| 3UTR TCA 72 bp | AATAACTACAAACACCTGATGAGTAAAAATGTACAGTaGTCGATGGGACAGAGCCGATGTGTTTCTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: NNYKHLMSKNVQ*SMGQSRCVSKT Trigger: AGTCTTAGAAACACATCGGCTCTGTCCCATCGATCACTGTACATTTTTACTCATCAGGTGTTTGTAGTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| 3UTR CCA 72 bp | AGGACTGTGTTGCTTCTGAACAGCATTACTGAGGCATaGACCCTAACAACAAATGTATATTCTATATGTATT | + |
|
Preference number: 3 (lower is better) Translates to: RTVLLLNSITEA*TLTTNVYSICI Trigger: AATACATATAGAATATACATTTGTTGTTAGGGTCCATGCCTCAGTAATGCTGTTCAGAAGCAACACAGTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCATCTTACGGGTGTGTCATAAAGTaGTGGATTGAACTTCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVSICFFTMQLVCYHSSYGCVIK*WIELLD Trigger: ATCAAGAAGTTCAATCCACAACTTTATGACACACCC...GTAAGATGAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| 3UTR TCA 72 bp | AAAATAAATCTACATTCGTACAAGTGTGTCTTCTGTTaGAGTCCAGAGACAAGAATACTATCTTGTCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KINLHSYKCVFC*SPETRILSCPS Trigger: TGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| 3UTR TCA 72 bp | ATCAATCTATGCATTAACACACTGTCTTGGTGGCTCTaGTTTCTGTACAAGTTTGAAAATACACTGCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: INLCINTLSWWL*FLYKFENTLQS Trigger: AGATTGCAGTGTATTTTCAAACTTGTACAGAAATCAGAGCCACCAAGACAGTGTGTTAATGCATAGATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| 3UTR CCA 72 bp | TGTACACAGTTACAGCTGTTCAAAGAAATCATCTTCTaGCCAGACTTGATAGTATCTAATAAAGGTAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: CTQLQLFKEIIF*PDLIVSNKGSI Trigger: TATGCTACCTTTATTAGATACTATCAAGTCTGGCCAGAAGATGATTTCTTTGAACAGCTGTAACTGTGTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| 3UTR TCA 72 bp | CAGAGACAAGAATACTATCTTGTCCGTCACAATATGTaGAAAGACTCAGTTTCGATTTGTTTCTTTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: QRQEYYLVRHNM*KDSVSICFFTM Trigger: CATTGTAAAGAAACAAATCGAAACTGAGTCTTTTCACATATTGTGACGGACAAGATAGTATTCTTGTCTCTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACAACCGCTATACGCAACTaGGTTGTTGGCCATGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QATPAESPLFICQFVSPTTAIRN*VVGHVA Trigger: GGCGACATGGCCAACAACTCAGTTGCGTATAGCGGT...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAACGCCTTAGAGCCCCCTaGATGGAACTTCCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSHRCSSVSSFLPHPKRLRAP*MELPLW Trigger: CCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCG...TTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTGACGACCCACAGGCCACTGATGCTGGCTGGCGATaGAGGGTTGTCGCCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TALLVRTTLGTTDDPQATDAGWR*RVVALE Trigger: CTCTAAGGCGACAACCCTCCATCGCCAGCCAGCATC...AGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGCTTCCGAAGCAGGAGTaGCTCGGTGGGTGGTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLPSRTEINHSSASQLPKQE*LGGWFR Trigger: ACGGAACCACCCACCGAGTCACTCCTGCTTCGGAAG...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTTGAAAGGGTTCTTCAAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTATGGCCGCGCCGTCCTaGGCTTTTGCTTTGTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LELKGFFKRSPPPSVRVSMAAPS*AFALLR Trigger: TCGCAACAAAGCAAAAGCCCAGGACGGCGCGGCCAT...ACTCACCCTGACGGAGGGTGGGGGACTCCTCTTGAAGAACCCTTTCAACTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | CGACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCGTTTTGTTACCCACATaGCGGGGTAATCCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPTGHSCRVTAVHLSVRFVLLPT*RGNPPS Trigger: AGAGGGTGGATTACCCCGCCATGTGGGTAACAAAAC...GAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACCACCACTCTTGTCCCCTAGAACGCAGGACTGTGTTGCTTCTGAACAGCCTCATTATCCCACTCTaGTTCTGGCTCCCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNHHSCPLERRTVLLLNSLIIPL*FWLPRW Trigger: CCAGCGGGGGAGCCAGAACCAGAGTGGGATAATGAG...GCTGTTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAAGAGTGGTGGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| 3UTR CAA 72 bp | CCGTGGTTCCTTACTCATGGTCCAAAGACCTGGGACTaGTCACGTTTACCAGTTCTTGGGCGTGGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWFLTHGPKTWD*SRLPVLGRGLR Trigger: CCTGAGGCCACGCCCAAGAACTGGTAAACGTGACAAGTCCCAGGTCTTTGGACCATGAGTAAGGAACCACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAACCACTCGGATATCATaGTGCTGGCTGGCGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKTTRIS*CWLAME Trigger: CTCCATCGCCAGCCAGCATCATGATATCCGAGTGGT...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220104.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCGGATATTTGGTGGGATaGCTTCTGGTTCCGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: THRPLLPSHRCSSVSSFLGYLVG*LLVPEP Trigger: AGGTTCCGGAACCAGAAGCCATCCCACCAAATATCC...GAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGGAGTTGCGTTTTGTTGGGGCGTCGTCTTCAGCATCAGTGTCATCAATGATGCTGGCTGGCGATaGAGGGTTGTCGCCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGVAFCWGVVFSISVINDAGWR*RVVALE Trigger: CTCTAAGGCGACAACCCTCCATCGCCAGCCAGCATC...ATTGATGACACTGATGCTGAAGACGACGCCCCAACAAAACGCAACTCCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAATATCATGATGCTGGCTaGCGATGGAGGGTTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKYHDAG*RWRVVA Trigger: GGCGACAACCCTCCATCGCCAGCCAGCATCATGATA...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220104.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAGCTGGTTGGAATGGTTaGAATAAGCTGGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKAGWNG*NKLAPE Trigger: CTCTGGGGCCAGCTTATTTCAACCATTCCAACCAGC...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAAGCTGGTTGGAATGGTTaGAATAAGCTGGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAESPLFICQFVSPTPQKAGWNG*NKLAPE Trigger: CTCTGGGGCCAGCTTATTTCAACCATTCCAACCAGC...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAATGCTCAATTCGACTCTaGAGGCCTCGGAACTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKCSIRL*RPRNCF Trigger: GAAGCAGTTCCGAGGCCTGCAGAGTCGAATTGAGCA...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAGGATGTAGATCGGTGTaGACTCTGCAAGCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKGCRSV*TLQAMV Trigger: GACCATGGCTTGCAGAGTGCACACCGATCTACATCC...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACTGTCATCGCGGTCTCTaGGTCGGAATACTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPSVTPPSLPSRTEINHCHRGL*VGILLP Trigger: AGGCAAAAGTATTCCGACCCAGAGACCGCGATGACA...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCCATGGTCTTTTCTaGACCCAGAAGGTATCGATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPSVTPPSLPSRTEINHSHGLF*TQKVSI Trigger: GATCGATACCTTCTGGGTTCAGAAAAGACCATGGCT...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAGCGGAAACTTCCATCTaGGTTTTTCAGGACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPSHRCSSVSSFLPHPKAETSI*VFQDCA Trigger: AGCACAGTCCTGAAAAACTCAGATGGAAGTTTCCGC...TTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | GTATGCCTCTCTCTATTAACCTTTCTCAAAATGCCAACAGCCCCCTCTATGCTGCTTCCGAAGCAGGAGTaGCTCGGTGGGTGGTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCLSLLTFLKMPTAPSMLLPKQE*LGGWFR Trigger: ACGGAACCACCCACCGAGTCACTCCTGCTTCGGAAG...CAGCATAGAGGGGGCTGTTGGCATTTTGAGAAAGGTTAATAGAGAGAGGCATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | ACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCTGCCTTGAATCAGTATaGCATCAGCTGGAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: THRPLLPSHRCSSVSSFLCLESV*HQLEEG Trigger: ACCTTCTTCCAGCTGATGGCATACTGATTCAAGGCA...GAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAGATCGGTGTGCACTCTaGAAGCCATGGTCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKDRCAL*KPWSFL Trigger: CAGAAAAGACCATGGCTTGCAGAGTGCACACCGATC...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACCACCACTCTTGTCCCCTAGAACGCAGGACTGTGTTGCTTCTGAACAGCGCGGAAACTTCCATCTaGGTTTTTCAGGACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNHHSCPLERRTVLLLNSAETSI*VFQDCA Trigger: AGCACAGTCCTGAAAAACTCAGATGGAAGTTTCCGC...GCTGTTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAAGAGTGGTGGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGGGGATGTGCGGCTCTaGATCTTCTATCCTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLPSRTEINHSSASQGDVRL*IFYPKL Trigger: GAGTTTAGGATAGAAGATTCAGAGCCGCACATCCCC...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCATTTCTATTGTAAGGTaGATTCCGCTGTCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQATPAESPLFICQFVSPISIVR*IPLSTA Trigger: TGCTGTTGACAGCGGAATTCACCTTACAATAGAAAT...GGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCATTGTTATTTTTGTTAGGAGAGGGCGGAGGGCTGGAGTTGCGTTTTGTTCGCCTTAGAGCCCCCTaGATGGAACTTCCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TALLFLLGEGGGLELRFVRLRAP*MELPLW Trigger: CCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCG...AACAAAACGCAACTCCAGCCCTCCGCCCTCTCCTAACAAAAATAACAATGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCTACGAGCTGATAGAATaGATGGCCCAAGATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: THRPLLPSHRCSSVSSFLYELIE*MAQDVL Trigger: AAGAACATCTTGGGCCATGCATTCTATCAGCTCGTA...GAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACTGCACAATTATTATCTaGACCACAAAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPSVTPPSLPSRTEINHCTIII*TTKVPR Trigger: CCTGGGCACCTTTGTGGTGCAGATAATAATTGTGCA...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAAGCACTCTGCAAGCCATaGTCTTTTCTGAACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAESPLFICQFVSPTPQKALCKP*SFLNPE Trigger: TTCTGGGTTCAGAAAAGACCATGGCTTGCAGAGTGC...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | TACTCATGGTCCAAAGACCTGGGACTTGTCACGTTTACCAGTTCTTGGGCGTGGTGTCATCGCGGTCTCTaGGTCGGAATACTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSWSKDLGLVTFTSSWAWCHRGL*VGILLP Trigger: AGGCAAAAGTATTCCGACCCAGAGACCGCGATGACA...CCACGCCCAAGAACTGGTAAACGTGACAAGTCCCAGGTCTTTGGACCATGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTTGAAAGGGTTCTTCAAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTTTTCTTTATTGCCTCTaGTACCTCAGGCCTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LELKGFFKRSPPPSVRVSFLYCL*YLRPHR Trigger: CCTGTGAGGCCTGAGGTACCAGAGGCAATAAAGAAA...ACTCACCCTGACGGAGGGTGGGGGACTCCTCTTGAAGAACCCTTTCAACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTGACGACCCACAGGCCACTAACTCCCTTTCGGCATaGTCAATCTCTTCAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: TALLVRTTLGTTDDPQATNSLSA*SISSTS Trigger: GGATGTTGAAGAGATTGACCATGCCGAAAGGGAGTT...AGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACAATGGAACTTCCACTCTaGAAAGCATTCACTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: QATPAESPLFICQFVSPTMELPL*KAFTTS Trigger: GGATGTAGTGAATGCTTTCCAGAGTGGAAGTTCCAT...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAATTAGAGCCCCCTGAATaGAACTTCCACTCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKLEPPE*NFHSGK Trigger: CTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAA...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCATTGTTATTTTTGTTAGGAGAGGGCGGAGGGCTGGAGTTGCGTTTTGTTCATCATGATGCTGGCTaGCGATGGAGGGTTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TALLFLLGEGGGLELRFVHHDAG*RWRVVA Trigger: GGCGACAACCCTCCATCGCCAGCCAGCATCATGATG...AACAAAACGCAACTCCAGCCCTCCGCCCTCTCCTAACAAAAATAACAATGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| 3UTR CAA 72 bp | AACCACCACTCTTGTCCCCTAGAACGCAGGACTGTGTaGCTTCTGAACAGCATTACTGAGGCATGGACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NHHSCPLERRTV*LLNSITEAWTL Trigger: TAGGGTCCATGCCTCAGTAATGCTGTTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAAGAGTGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCACCCAGCCCTTGCTCCAGTCGTTaGAAGCCGTCACCAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKLKYSLNDPGLSVSPSPCSSR*KPSPTP Trigger: TGGTGTTGGTGACGGCTTTCAACGACTGGAGCAAGG...GCTGGGTGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | ACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCGGTGGCAATATTTTTaGCGTATAAGCACAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: THRPLLPSHRCSSVSSFLRWQYF*RISTIH Trigger: GTGAATTGTGCTTATACGTCAAAAATATTGCCACCG...GAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGCAGTATGCCATCAGCTaGAAGAAGGTCACCGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLPSRTEINHSSASQQYAIS*KKVTVL Trigger: AAGTACGGTGACCTTCTTCCAGCTGATGGCATACTG...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAACAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCAATCCCACTCTGGTTCTaGCTCCCCCGCTGGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQQKLKYSLNDPGLSVSIPLWF*LPRWEV Trigger: GACTTCCCAGCGGGGGAGCCAGAACCAGAGTGGGAT...TGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTGTTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAACTCGGATCTGTGTTTaGATTCTGTTCAGGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKTRICV*ILFRPL Trigger: TAGAGGCCTGAACAGAATCCAAACACAGATCCGAGT...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAATGGAACTTCCACTCTaGAAAGCATTCACTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPSHRCSSVSSFLPHPKMELPL*KAFTTS Trigger: GGATGTAGTGAATGCTTTCCAGAGTGGAAGTTCCAT...TTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR TCA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAAGAACCTTCCATCACATaGGTACCTGAAAGAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAESPLFICQFVSPTPQKEPSIT*VPERSK Trigger: CTTACTTCTTTCAGGTACTCATGTGATGGAAGGTTC...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR TCA 90 bp | TTAGAGTTGAAAGGGTTCTTCAAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTGTAATTCCAGCCCTCTaGCATTTCTTTATTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LELKGFFKRSPPPSVRVSVIPAL*HFFIAS Trigger: AGAGGCAATAAAGAAATGTCAGAGGGCTGGAATTAC...ACTCACCCTGACGGAGGGTGGGGGACTCCTCTTGAAGAACCCTTTCAACTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAACATTTCTTTCCCCGTaGATTTTCCGGGCGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKTFLSP*IFRAFI Trigger: AATAAACGCCCGGAAAATTCACGGGGAAAGAAATGT...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR TCA 90 bp | CCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTAGGTACGCTGGTTGGAATGGTTaGAATAAGCTGGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRTEINHSSASQDNVRYAGWNG*NKLAPE Trigger: CTCTGGGGCCAGCTTATTTCAACCATTCCAACCAGC...GTACCTAACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCACCCAGCTGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQKLKYSLNDPGLSVSPSWASWG*RGSRLV Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...GCTGGGTGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
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| CDS-3UTR GCA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACCAATCTTCAGGTCATTaGCTTGAATCAGTATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPSVTPPSLPSRTEINHQSSGH*LESVCH Trigger: ATGGCATACTGATTCAAGGCAATGACCTGAAGATTG...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR GCA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACTCGTCCCCACATAACTaGTTTGACAATGCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSPSVTPPSLPSRTEINHSSPHN*FDNACK Trigger: TTTACAAGCATTGTCAAAGCAGTTATGTGGGGACGA...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACTGCACAATTATTATCTaGACCACAAAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPSRTEINHSSASQDNCTIII*TTKVPR Trigger: CCTGGGCACCTTTGTGGTGCAGATAATAATTGTGCA...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACTCAATAAGGGGGATGTaGGGCTCTGAATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPSRTEINHSSASQDNSIRGM*GSESSI Trigger: GATAGAAGATTCAGAGCCGCACATCCCCCTTATTGA...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
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| CDS-3UTR CCA 90 bp | TCATTTGTACCATCACCCGTTACAGCTACAACCTGTCGTTGCTCTGAGACTGTGGGCCTTCTGATGCCATaGGCTCGATCACAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFVPSPVTATTCRCSETVGLLMP*ARSQFS Trigger: TGAAAACTGTGATCGAGCCCATGGCATCAGAAGGCC...CACAGTCTCAGAGCAACGACAGGTTGTAGCTGTAACGGGTGATGGTACAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| CDS-3UTR CCA 90 bp | ACAGCATTGTTATTTTTGTTAGGAGAGGGCGGAGGGCTGGAGTTGCGTTTTGTTCTAAACCACAAGATCTaGCCACGCCGCAACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TALLFLLGEGGGLELRFVLNHKI*PRRNSL Trigger: AAGGGAGTTGCGGCGTGGCCAGATCTTGTGGTTTAG...AACAAAACGCAACTCCAGCCCTCCGCCCTCTCCTAACAAAAATAACAATGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGAAAGCACCCTCAGTCTaGCAGAAAGCTTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLPSRTEINHSSASQKAPSV*QKALLL Trigger: CAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTT...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218948.2 |
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| 3UTR CAA 72 bp | TCTTGTAAGACACAAGCCTTTCCAGAACCACCACTCTaGTCCCCTAGAACGCAGGACTGTGTTGCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCKTQAFPEPPL*SPRTQDCVASE Trigger: TTCAGAAGCAACACAGTCCTGCGTTCTAGGGGACAAGAGTGGTGGTTCTGGAAAGGCTTGTGTCTTACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACACATTTCTTTCCCCGTaGATTTTCCGGGCGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPSRTEINHSSASQDNTFLSP*IFRAFI Trigger: AATAAACGCCCGGAAAATTCACGGGGAAAGAAATGT...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR GCA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAAGTTGCTCTGAGACTGTaGTGTCAATTATACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAESPLFICQFVSPTPQKVALRL*CQLYLS Trigger: TGAAAGGTATAATTGACAGCACAGTCTCAGAGCAAC...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCACCCAGCGTCACTCCTTCCAGCAATGCCCATTaGAAAGCCAACGTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKYSLNDPGLSVSPSVTPSSNAH*KANVCF Trigger: AAAGCAGACGTTGGCTTTGCAATGGGCATTGCTGGA...AGGAGTGACGCTGGGTGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACTACGAGCTGATAGAATaGATGGCCCAAGATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPSRTEINHSSASQDNYELIE*MAQDVL Trigger: AAGAACATCTTGGGCCATGCATTCTATCAGCTCGTA...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220124.2 |
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| CDS-3UTR GCA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGATCGACCACAGCCATTaGTCTATTGAAAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLPSRTEINHSSASQIDHSH*SIESSE Trigger: CTCAGAACTTTCAATAGAGCAATGGCTGTGGTCGAT...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCACCCAGCGGCCTTCTGATGCCATaGGCTCGATCACAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKLKYSLNDPGLSVSPSGLLMP*ARSQFS Trigger: TGAAAACTGTGATCGAGCCCATGGCATCAGAAGGCC...GCTGGGTGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCTTACTCATGGTCCAAAGACCTGGGACTTGTCACGTTTACCAGTTCTTGTTTCTTTATTGCCTCTaGTACCTCAGGCCTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLMVQRPGTCHVYQFLFLYCL*YLRPHR Trigger: CCTGTGAGGCCTGAGGTACCAGAGGCAATAAAGAAA...CAAGAACTGGTAAACGTGACAAGTCCCAGGTCTTTGGACCATGAGTAAGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACTGTGTCTTCTGTGTTTaGATTCTGTTCAGGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSLPSRTEINHSSASQDNCVFCV*ILFRPL Trigger: TAGAGGCCTGAACAGAATCCAAACACAGAAGACACA...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218948.2 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACTCAGCACAAAGGTATTaGACACGATGGTGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPSRTEINHSSASQDNSAQRY*TRWCNV Trigger: AACATTACACCATCGTGTTCAATACCTTTGTGCTGA...GTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR TCA 90 bp | AGCCAACAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCATGGGCTTCCTGGGGATaGAGAGGTAGCAGACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQQQKLKYSLNDPGLSVSWASWG*RGSRLV Trigger: AACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCA...TGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTGTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
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| CDS-3UTR GCA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTGGTATCTGGATGACCTaGCCACCCCTGATGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVGIWMT*PPLMTV Trigger: CACCGTCATCAGGGGTGGGCAGGTCATCCAGATACC...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTGACGACCCACAGGCCACTATAGACTTTGTACAGTaGTTCCTCTGGTATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TALLVRTTLGTTDDPQATIDFVQ*FLWYFI Trigger: AATGAAATACCAGAGGAAGCACTGTACAAAGTCTAT...AGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTTGGTGGGATGGCTTCTaGTTCCGGAACCTTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSRTEINHSSASQDNVWWDGF*FRNLFI Trigger: TATAAAAAGGTTCCGGAACCAGAAGCCATCCCACCA...AACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | GTCCTAAGACCCACTTATGGATTTAGAGGTGGGGTAAAAAGCCATTGCCTTGAGGTAGGACAGGATATTTaGTGGGATGGCTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRPTYGFRGGVKSHCLEVGQDI*WDGFWF Trigger: GAACCAGAAGCCATCCCACCAAATATCCTGTCCTAC...CTCAAGGCAATGGCTTTTTACCCCACCTCTAAATCCATAAGTGGGTCTTAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | AAGGTGACTGAATCGCTACATAAAATGATGACATTCAGGTACTCTTTAAAAGCCATCCCACTCTGGTTCTaGCTCCCCCGCTGGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVTESLHKMMTFRYSLKAIPLWF*LPRWEV Trigger: GACTTCCCAGCGGGGGAGCCAGAACCAGAGTGGGAT...GGCTTTTAAAGAGTACCTGAATGTCATCATTTTATGTAGCGATTCAGTCACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| CDS-3UTR TCA 90 bp | TCATTTGTACCATCACCCGTTACAGCTACAACCTGTCGTTGCTCTGAGACTGTGGTAATTCCAGCCCTCTaGCATTTCTTTATTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFVPSPVTATTCRCSETVVIPAL*HFFIAS Trigger: AGAGGCAATAAAGAAATGTCAGAGGGCTGGAATTAC...CACAGTCTCAGAGCAACGACAGGTTGTAGCTGTAACGGGTGATGGTACAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
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| CDS-3UTR TCA 90 bp | AGCCAACAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCAGGGGATGTGCGGCTCTaGATCTTCTATCCTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQQKLKYSLNDPGLSVSGDVRL*IFYPKL Trigger: GAGTTTAGGATAGAAGATTCAGAGCCGCACATCCCC...TGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTGTTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTATCGACCACAGCCATTaGTCTATTGAAAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSRTEINHSSASQDNVIDHSH*SIESSE Trigger: CTCAGAACTTTCAATAGAGCAATGGCTGTGGTCGAT...AACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS-3UTR GCA 90 bp | GTATGCCTCTCTCTATTAACCTTTCTCAAAATGCCAACAGCCCCCTCTATGCTGTCAATAAGGGGGATGTaGGGCTCTGAATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VCLSLLTFLKMPTAPSMLSIRGM*GSESSI Trigger: GATAGAAGATTCAGAGCCGCACATCCCCCTTATTGA...CAGCATAGAGGGGGCTGTTGGCATTTTGAGAAAGGTTAATAGAGAGAGGCATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR CCA 90 bp | GAAGGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAACTCATTATCCCACTCTaGTTCTGGCTCCCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFLCITIRKLPVYEELIIPL*FWLPRW Trigger: CCAGCGGGGGAGCCAGAACCAGAGTGGGATAATGAG...TTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR TCA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTGAACAGCCAGCTTTGTaGGTTTCCCCTGTAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVEQPAL*VSPVTR Trigger: CCGTGTTACAGGGGAAACTCACAAAGCTGGCTGTTC...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS-3UTR TCA 90 bp | TGGCTAAAAGAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTAAGCCAGTGAGATGGTaGCTGCCAGCGGAAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLKEMVSIIKRNQHHHGSKPVRW*LPAEDL Trigger: AAGGTCTTCCGCTGGCAGTCACCATCTCACTGGCTT...ACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTCTTTTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTTCAGCACAAAGGTATTaGACACGATGGTGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSRTEINHSSASQDNVSAQRY*TRWCNV Trigger: AACATTACACCATCGTGTTCAATACCTTTGTGCTGA...AACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | AACGATGTATGCCTCTCTCTATTAACCTTTCTCAAAATGCCAACAGCCCCCTCTCTGACATTTCTTTATTaGCTCTGGTACCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NDVCLSLLTFLKMPTAPSLTFLY*LWYLRP Trigger: AGGCCTGAGGTACCAGAGGCAATAAAGAAATGTCAG...AGAGGGGGCTGTTGGCATTTTGAGAAAGGTTAATAGAGAGAGGCATACATCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | CCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTAGGTACTACGAGCTGATAGAATaGATGGCCCAAGATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRTEINHSSASQDNVRYYELIE*MAQDVL Trigger: AAGAACATCTTGGGCCATGCATTCTATCAGCTCGTA...GTACCTAACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTGTGTATGTTTGTCAGTaGGAGATGATCTTGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSRTEINHSSASQDNVVYVCQ*EMILQV Trigger: TACTTGCAAGATCATCTCCCACTGACAAACATACAC...AACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTCTAAACCACAAGATCTaGCCACGCCGCAACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLKSRDKNTILSVTICLNHKI*PRRNSL Trigger: AAGGGAGTTGCGGCGTGGCCAGATCTTGTGGTTTAG...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACTTAGAGCCCCCTGAATaGAACTTCCACTCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSVSSVEVQRQEYYLVRHLEPPE*NFHSGK Trigger: CTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAA...GTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAAGCTGGTTGGAATGGTTaGAATAAGCTGGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFLCITIRKLPVYEEAGWNG*NKLAPE Trigger: CTCTGGGGCCAGCTTATTTCAACCATTCCAACCAGC...TTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 |
||
| CDS-3UTR TCA 90 bp | CCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGACAACGTTAGGTACATTTCTATTGTAAGGTaGATTCCGCTGTCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRTEINHSSASQDNVRYISIVR*IPLSTA Trigger: TGCTGTTGACAGCGGAATTCACCTTACAATAGAAAT...GTACCTAACGTTGTCCTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTGCTACAACCTGTCGTTaGTCTGAGACTGTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLLKSRDKNTILSVTICATTCR*SETVLS Trigger: TGACAGCACAGTCTCAGAGCAACGACAGGTTGTAGC...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | GTATGCCTCTCTCTATTAACCTTTCTCAAAATGCCAACAGCCCCCTCTATGCTGCCAAAGTCTCCATCATaGTTAGCTTCTTTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCLSLLTFLKMPTAPSMLPKSPS*LASFKE Trigger: CTCTTTGAAAGAAGCTAACCATGATGGAGACTTTGG...CAGCATAGAGGGGGCTGTTGGCATTTTGAGAAAGGTTAATAGAGAGAGGCATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAACAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCAAACTCCCTTTCGGCATaGTCAATCTCTTCAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SQQQKLKYSLNDPGLSVSNSLSA*SISSTS Trigger: GGATGTTGAAGAGATTGACCATGCCGAAAGGGAGTT...TGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTGTTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAACTCCCTTTCGGCATaGTCAATCTCTTCAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVSSVEVQRQEYYLVRHNSLSA*SISSTS Trigger: GGATGTTGAAGAGATTGACCATGCCGAAAGGGAGTT...GTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | GGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAACAACTAAACCACAAGATCTaGCCACGCCGCAACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLIFLCITIRKLPVYEEQLNHKI*PRRNSL Trigger: AAGGGAGTTGCGGCGTGGCCAGATCTTGTGGTTTAG...TTGTTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAACTAAACCACAAGATCTaGCCACGCCGCAACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFLCITIRKLPVYEELNHKI*PRRNSL Trigger: AAGGGAGTTGCGGCGTGGCCAGATCTTGTGGTTTAG...TTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 |
||
| 3UTR CAA 72 bp | CCATCAACTAGATGTTTCTTTGCTAGGTCAGCATTCTaGGATGTAGTAGTCCTCGTAAACTTTAGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTRCFFARSAF*DVVVLVNFRSA Trigger: GGCTGACCTAAAGTTTACGAGGACTACTACATCCAAGAATGCTGACCTAGCAAAGAAACATCTAGTTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAACAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCAACAGTAAGCTGGAACTaGAGGAATTTTGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQQQKLKYSLNDPGLSVSTVSWN*RNFEML Trigger: CAGCATCTCAAAATTCCTTCAGTTCCAGCTTACTGT...TGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTGTTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGCAGACTTGTTCATTTCTATTGTAAGGTGAATTCCGCTGTCAACAGCACATTTCTTTCCCCGTaGATTTTCCGGGCGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RGSRLVHFYCKVNSAVNSTFLSP*IFRAFI Trigger: AATAAACGCCCGGAAAATTCACGGGGAAAGAAATGT...GCTGTTGACAGCGGAATTCACCTTACAATAGAAATGAACAAGTCTGCTACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAAAAAGTTCTGAGCAGCTaGAAGGCTTCCCGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFLCITIRKLPVYEEKVLSS*KASRQT Trigger: AGTTTGGCGGGAAGCCTTTCAGCTGCTCAGAACTTT...TTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 |
||
| CDS-3UTR TCA 90 bp | TACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTAAAGTTCTGAGCAGCTaGAAGGCTTCCCGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: YIRTSVSSVEVQRQEYYLKVLSS*KASRQT Trigger: AGTTTGGCGGGAAGCCTTTCAGCTGCTCAGAACTTT...AAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAATCAGCAGACCTGCTTTaGCAATCTGAACAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFLCITIRKLPVYEESADLL*QSEQPA Trigger: AGCTGGCTGTTCAGATTGGCAAAGCAGGTCTGCTGA...TTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAACAGCAGAAATTAAAGTATTCACTCAATGATCCAGGGCTCTCTGTCTCAATCGACCACAGCCATTaGTCTATTGAAAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQQQKLKYSLNDPGLSVSIDHSH*SIESSE Trigger: CTCAGAACTTTCAATAGAGCAATGGCTGTGGTCGAT...TGAGACAGAGAGCCCTGGATCATTGAGTGAATACTTTAATTTCTGCTGTTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGACTGAATCGCTACATAAAATGATGACATTCAGGTACTCTTTAAAAGCCAACACTTTTTCAGAATaGTCTCGGAGGCACCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVTESLHKMMTFRYSLKANTFSE*SRRHPC Trigger: GCAAGGGTGCCTCCGAGATCATTCTGAAAAAGTGTT...GGCTTTTAAAGAGTACCTGAATGTCATCATTTTATGTAGCGATTCAGTCACCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGACTCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCAAAGTTCTGAGCAGCTaGAAGGCTTCCCGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KRLSFDLFLYNAASVLPFKVLSS*KASRQT Trigger: AGTTTGGCGGGAAGCCTTTCAGCTGCTCAGAACTTT...GAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGAGTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR TCA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATAAAGTTCTGAGCAGCTaGAAGGCTTCCCGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNKVLSS*KASRQT Trigger: AGTTTGGCGGGAAGCCTTTCAGCTGCTCAGAACTTT...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | GGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAACAAAGACATCAGCAGACCTaGTTTGCCAATCTGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLIFLCITIRKLPVYEEQRHQQT*FANLNS Trigger: GCTGTTCAGATTGGCAAAGCAGGTCTGCTGATGTCT...TTGTTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAACACTTTTTCAGAATaGTCTCGGAGGCACCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNKSTFVQVCLLLKSRDKNTFSE*SRRHPC Trigger: GCAAGGGTGCCTCCGAGATCATTCTGAAAAAGTGTT...CTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | GGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAACAAAACCTGTCGTTGCTCTaGGACTGTGCTGTCAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLIFLCITIRKLPVYEEQNLSLL*DCAVNY Trigger: ATAATTGACAGCACAGTCTCAGAGCAACGACAGGTT...TTGTTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTTCAACTTGGTGCAAATaGCATAGACATCTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVSTWCK*HRHLHS Trigger: GCTATGGAGATGTCTATGGCATTTGCACCAAGTTGA...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTGACTGAATCGCTACATAAAATGATGACATTCAGGTACTCTTTAAAAGCCCTGACATTTCTTTATTaGCTCTGGTACCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVTESLHKMMTFRYSLKALTFLY*LWYLRP Trigger: AGGCCTGAGGTACCAGAGGCAATAAAGAAATGTCAG...GGCTTTTAAAGAGTACCTGAATGTCATCATTTTATGTAGCGATTCAGTCACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR GCA 90 bp | GGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAACAATGCACAATTATTATCTaGACCACAAAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLIFLCITIRKLPVYEEQCTIII*TTKVPR Trigger: CCTGGGCACCTTTGTGGTGCAGATAATAATTGTGCA...TTGTTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTAATTTTTCTCTGCATTACTATAAGGAAGCTTCCCGTCTATGAAGAAAACTCCCTTTCGGCATaGTCAATCTCTTCAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFLCITIRKLPVYEENSLSA*SISSTS Trigger: GGATGTTGAAGAGATTGACCATGCCGAAAGGGAGTT...TTCTTCATAGACGGGAAGCTTCCTTATAGTAATGCAGAGAAAAATTAGTCCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTAAAAGAAAGGCCCAATaGTACTATGGCTGCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLLKSRDKNTILSVTICKRKAQ*YYGCNF Trigger: GAAATTGCAGCCATAGTATCATTGGGCCTTTCTTTT...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | TACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTCCTTCATCATTTTCTTaGCTGAGTAAGCCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YIRTSVSSVEVQRQEYYLPSSFS*LSKPVR Trigger: TCTCACTGGCTTACTCAGTCAAGAAAATGATGAAGG...AAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGACTCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCTTTGTCAGTGGGAGATaGTCTTGCAAGTACTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLSFDLFLYNAASVLPFFVSGR*SCKYSK Trigger: CTTCGAGTACTTGCAAGATCATCTCCCACTGACAAA...GAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGAGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGACTCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCATATTTGTTACATCATaGTGCTGGCTGGCGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLSFDLFLYNAASVLPFIFVTS*CWLAME Trigger: CTCCATCGCCAGCCAGCATCATGATGTAACAAATAT...GAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGAGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATTGCACAATTATTATCTaGACCACAAAGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNCTIII*TTKVPR Trigger: CCTGGGCACCTTTGTGGTGCAGATAATAATTGTGCA...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTAAGTACTCGAAGCTTTaGCCAAATCTTGTCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLKSRDKNTILSVTICKYSKL*PNLVYP Trigger: AGGATAGACAAGATTTGGCCAAAGCTTCGAGTACTT...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTAGAGACTTCTTAACATaGTCAGATTCACCAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLKSRDKNTILSVTICRDFLT*SDSPVN Trigger: ATTGACTGGTGAATCTGATCATGTTAAGAAGTCTCT...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR TCA 90 bp | TACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTTCAGCACAAAGGTATTaGACACGATGGTGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YIRTSVSSVEVQRQEYYLSAQRY*TRWCNV Trigger: AACATTACACCATCGTGTTCAATACCTTTGTGCTGA...AAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR GCA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATATCGACCACAGCCATTaGTCTATTGAAAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNIDHSH*SIESSE Trigger: CTCAGAACTTTCAATAGAGCAATGGCTGTGGTCGAT...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| 3UTR CAA 72 bp | ACACACTGTCTTGGTGGCTCTGATTTCTGTACAAGTTaGAAAATACACTGCAATCTATACCATAAGGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: THCLGGSDFCTS*KIHCNLYHKVN Trigger: GTTAACCTTATGGTATAGATTGCAGTGTATTTTCAAACTTGTACAGAAATCAGAGCCACCAAGACAGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR TCA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATAAGATGATTCCTGTTTaGGAATTCACACCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNKMIPV*EFTPTA Trigger: TGCTGTAGGTGTGAATTCTCAAACAGGAATCATCTT...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTGAAAGCAACAATCACTaGTACTACATTAACAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVESNNH*YYINSK Trigger: CTTACTGTTAATGTAGTAGCAGTGATTGTTGCTTTC...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGCACTTAAACCTTCATTaGGAGATGTTTTCAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNKSTFVQVCLLLKSRDKHLNLH*EMFSTW Trigger: CCAAGTTGAAAACATCTCCCAATGAAGGTTTAAGTG...CTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS TCA 90 bp | TCTCATTATCCCACTCTGGTTCTGGCTCCCCCGCTGGGAAGTCTCTaGACGCTAGGCATATGGTCCTCAGGCCTTCTGATGCCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHYPTLVLAPPLGSL*TLGIWSSGLLMPWA Trigger: AGCCCATGGCATCAGAAGGCCTGAGGACCATATGCCTAGCGTTCAGAGACTTCCCAGCGGGGGAGCCAGAACCAGAGTGGGATAATGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000219090.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACATCCTTGCTCCAGTCGTaGAAAGCCGTCACCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: QATPAESPLFICQFVSPTSLLQS*KAVTNT Trigger: GGTGTTGGTGACGGCTTTCAACGACTGGAGCAAGGA...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTGACGACCCACAGGCCACTTTCACTCTTCAGAGGTaGCATCTCCATGGCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TALLVRTTLGTTDDPQATFTLQR*HLHGRA Trigger: GGCGCGGCCATGGAGATGCAACCTCTGAAGAGTGAA...AGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACGCCGTCCTGGGCTTTaGCTTTGTTGCGATTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QATPAESPLFICQFVSPTRRPGL*LCCDSQ Trigger: TTGAGAATCGCAACAAAGCAAAAGCCCAGGACGGCG...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAACGGAACTGCTTCTCCTaGCTCCAGTCGTTGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCRVTAVHLSVRFSHTPKRNCFS*LQSLKA Trigger: GGCTTTCAACGACTGGAGCAAGGAGAAGCAGTTCCG...TTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | ACCCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCGGTAGGACAGGATATTaGGTGGGATGGCTTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: THRPLLPSHRCSSVSSFLGRTGY*VGWLLV Trigger: AACCAGAAGCCATCCCACCAAATATCCTGTCCTACC...GAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCCAGTGGGAGATGATCTaGCAAGTACTCGAAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQATPAESPLFICQFVSPQWEMI*QVLEAL Trigger: CAAAGCTTCGAGTACTTGCAAGATCATCTCCCACTG...GGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAGTTGAAAGGGTTCTTCAAGAGGAGTCCCCCACCCTCCGTCAGGGTGAGTTGGAGTTGCGTTTTGTaGGGGCGTCGTCTTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LELKGFFKRSPPPSVRVSWSCVL*GRRLQH Trigger: ATGCTGAAGACGACGCCCCAACAAAACGCAACTCCA...ACTCACCCTGACGGAGGGTGGGGGACTCCTCTTGAAGAACCCTTTCAACTCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCTACATCCATCTGTGTTaGGATTCTGTTCAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQATPAESPLFICQFVSPYIHLC*DSVQAS Trigger: AGAGGCCTGAACAGAATCCAAACACAGATGGATGTA...GGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS CCA 90 bp | TACGAAATGCATTCACCACTCGGATATCATGATGCTGGCTGGCGATaGAGGGTTGTCGCCTTAGAGCCCCCTGAATGGAACTTCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: YEMHSPLGYHDAGWR*RVVALEPPEWNFHS Trigger: AGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCGACAACCCTCCATCGCCAGCCAGCATCATGATATCCGAGTGGTGAATGCATTTCGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCTGTGGATTGAACTTCTaGATTCTGGCTTCTCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: PQATPAESPLFICQFVSPCGLNF*ILASLT Trigger: GGTTAGAGAAGCCAGAATCAAGAAGTTCAATCCACA...GGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAACAGCATTGTTATTTTaGTTAGGAGAGGGCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPSHRCSSVSSFLPHPKTALLF*LGEGGG Trigger: CCCTCCGCCCTCTCCTAACAAAAATAACAATGCTGT...TTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS CCA 90 bp | CCTCTAAACCACAAGATCTGGCCACGCCGCAACTCCCTTTCGGCATaGTCAATCTCTTCAACATCCTCTGCTAATTCCTCCTCAGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: PLNHKIWPRRNSLSA*SISSTSSANSSSGI Trigger: GATACCTGAGGAGGAATTAGCAGAGGATGTTGAAGAGATTGACCATGCCGAAAGGGAGTTGCGGCGTGGCCAGATCTTGTGGTTTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAAATCCCCTTCCGGAGGTaGATAAAAAGAAAGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAESPLFICQFVSPTPQKIPFRR*IKRKAQ Trigger: TTGGGCCTTTCTTTTTATCAACCTCCGGAAGGGGAT...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACAAGATTTGCTTTCTTCTaGTCTTTCTCATCACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QATPAESPLFICQFVSPTRFAFF*SFSSPS Trigger: GGACGGTGATGAGAAAGACAAGAAGAAAGCAAATCT...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTGACGACCCACAGGCCACTGAAGATGATTCCTGTTaGAGAATTCACACCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TALLVRTTLGTTDDPQATEDDSC*RIHTYS Trigger: GCTGTAGGTGTGAATTCTCAAACAGGAATCATCTTC...AGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAATGGGCTTTTGCTTTGTaGCGATTCTCAATAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAESPLFICQFVSPTPQKWAFAL*RFSIAP Trigger: TGGAGCTATTGAGAATCGCAACAAAGCAAAAGCCCA...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCTTCATTTATGTAAGCTaGAACAACCGTCATCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PQATPAESPLFICQFVSPFIYVS*NNRHPV Trigger: AACAGGATGACGGTTGTTCAAGCTTACATAAATGAA...GGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | TCACCCGTGGTTCCTTACTCATGGTCCAAAGACCTGGGACTTGTCACGTTTACCTCTGACATTTCTTTATaGCCTCTGGTACCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPVVPYSWSKDLGLVTFTSDISL*PLVPQA Trigger: GGCCTGAGGTACCAGAGGCAATAAAGAAATGTCAGA...GGTAAACGTGACAAGTCCCAGGTCTTTGGACCATGAGTAAGGAACCACGGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219090.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCCACTCCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACAGAAGATGGCGTTATaGAAGATTCCTTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: QATPAESPLFICQFVSPTQKMAL*KIPSNT Trigger: TGTGTTTGAAGGAATCTTCAATAACGCCATCTTCTG...TGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGGAGTGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACAGCTCTGCTAGTCAGGTGTGTCTTCTGTGTTaGGATTCTGTTCAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPPSLPSRTEINHSSASQVCLLC*DSVQAS Trigger: AGAGGCCTGAACAGAATCCAAACACAGAAGACACAC...CTGACTAGCAGAGCTGTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218948.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCTGCTAGTCAGGACAACGTTAGGTACCACTGACGACCCACAGGCCACTCAGAAGATGGCGTTATaGAAGATTCCTTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: TALLVRTTLGTTDDPQATQKMAL*KIPSNT Trigger: TGTGTTTGAAGGAATCTTCAATAACGCCATCTTCTG...AGTGGCCTGTGGGTCGTCAGTGGTACCTAACGTTGTCCTGACTAGCAGAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCCGAGTCACCGCTGTTCATCTGTCAGTTCGTTTCTCCCACACCCCAAAAATGTGGATTGAACTTCTaGATTCTGGCTTCTCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: PAESPLFICQFVSPTPQKCGLNF*ILASLT Trigger: GGTTAGAGAAGCCAGAATCAAGAAGTTCAATCCACA...TTTTTGGGGTGTGGGAGAAACGAACTGACAGATGAACAGCGGTGACTCGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCACCCAGCGTCACTCCTCCCTCCCTCCCATCAAGAACTGAGATAAACCACGGGTGTGTCATAAAGTaGTGGATTGAACTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VSPSVTPPSLPSRTEINHGCVIK*WIELLD Trigger: ATCAAGAAGTTCAATCCACAACTTTATGACACACCC...GTGGTTTATCTCAGTTCTTGATGGGAGGGAGGGAGGAGTGACGCTGGGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | GTATGCCTCTCTCTATTAACCTTTCTCAAAATGCCAACAGCCCCCTCTATGCTGTCTGACATTTCTTTATaGCCTCTGGTACCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCLSLLTFLKMPTAPSMLSDISL*PLVPQA Trigger: GGCCTGAGGTACCAGAGGCAATAAAGAAATGTCAGA...CAGCATAGAGGGGGCTGTTGGCATTTTGAGAAAGGTTAATAGAGAGAGGCATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | GTATGCCTCTCTCTATTAACCTTTCTCAAAATGCCAACAGCCCCCTCTATGCTGCCGGTGGCAATATTTTaGACGTATAAGCACAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VCLSLLTFLKMPTAPSMLPVAIF*TYKHNS Trigger: TGAATTGTGCTTATACGTCAAAAATATTGCCACCGG...CAGCATAGAGGGGGCTGTTGGCATTTTGAGAAAGGTTAATAGAGAGAGGCATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS CCA 90 bp | CTGCAGGATTTCCACTTAAACCTTCATTGGGAGATGTTTTCAACTTaGTGCAAATGCCATAGACATCTCCATAGCTCTCCTGTATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQDFHLNLHWEMFST*CKCHRHLHSSPVFS Trigger: GGAAAATACAGGAGAGCTATGGAGATGTCTATGGCATTTGCACCAAGTTGAAAACATCTCCCAATGAAGGTTTAAGTGGAAATCCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000219557.2 ENSMUST00000219624.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCATCTTACTGGAGTTGCGTTTTGTaGGGGCGTCGTCTTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVSICFFTMQLVCYHSSYWSCVL*GRRLQH Trigger: ATGCTGAAGACGACGCCCCAACAAAACGCAACTCCA...GTAAGATGAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTTCCTGGGCTTTTGCTTaGTTGCGATTCTCAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVSWAFA*LRFSIA Trigger: AGCTATTGAGAATCGCAACAAAGCAAAAGCCCAGGA...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATTTCCAGCAATGCCCATaGCAAAGCCAACGTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNFQQCP*QSQRLL Trigger: AAGCAGACGTTGGCTTTGCAATGGGCATTGCTGGAA...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGTAGCAGACTTGTTCATTTCTATTGTAAGGTGAATTCCGCTGTCAACAGCCAGAAGATGGCGTTATaGAAGATTCCTTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: RGSRLVHFYCKVNSAVNSQKMAL*KIPSNT Trigger: TGTGTTTGAAGGAATCTTCAATAACGCCATCTTCTG...GCTGTTGACAGCGGAATTCACCTTACAATAGAAATGAACAAGTCTGCTACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220124.2 |
||
| CDS-3UTR CAA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATCACTCGGATCTGTGTTaGGATTCTGTTCAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNHSDLC*DSVQAS Trigger: AGAGGCCTGAACAGAATCCAAACACAGATCCGAGTG...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSVSSVEVQRQEYYLVRHEEVAD*FISIVR Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...GTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTTACATCCATCTGTGTTaGGATTCTGTTCAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLLLKSRDKNTILSVTICYIHLC*DSVQAS Trigger: AGAGGCCTGAACAGAATCCAAACACAGATGGATGTA...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS GCA 90 bp | TTCCACTTAAACCTTCATTGGGAGATGTTTTCAACTTGGTGCAAATaGCATAGACATCTCCATAGCTCTCCTGTATTTTCCGTAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FHLNLHWEMFSTWCK*HRHLHSSPVFSVMH Trigger: ATGCATTACGGAAAATACAGGAGAGCTATGGAGATGTCTATGGCATTTGCACCAAGTTGAAAACATCTCCCAATGAAGGTTTAAGTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000219557.2 ENSMUST00000219624.2 |
||
| CDS-3UTR CAA 90 bp | ATTACAGTGTCTCAAAGAGAGAAACGCACACCGAGCGTGTTTTGCTATTATGACCTTGTCTATCCTTTCTaGTTCAATCTCTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITVSQREKRTPSVFCYYDLVYPF*FNLSFF Trigger: GAAAAAGGAGAGATTGAACAAGAAAGGATAGACAAG...GTCATAATAGCAAAACACGCTCGGTGTGCGTTTCTCTCTTTGAGACACTGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | AATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAATACAGCATTGTTATTTTaGTTAGGAGAGGGCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKSTFVQVCLLLKSRDKNTALLF*LGEGGG Trigger: CCCTCCGCCCTCTCCTAACAAAAATAACAATGCTGT...ATTCTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220104.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCTGTTGAAGTCCAGAGACAAGAATACTATCTTGTCCGTCACAATATGTCCACTTAAACCTTCATaGGGAGATGTTTTCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLLKSRDKNTILSVTICPLKPS*GDVFNL Trigger: CAAGTTGAAAACATCTCCCAATGAAGGTTTAAGTGG...ACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTCAGAAGATGGCGTTATaGAAGATTCCTTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVQKMAL*KIPSNT Trigger: TGTGTTTGAAGGAATCTTCAATAACGCCATCTTCTG...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGTAAGCATCATTAAAAGAAATCAACACCATCACGGTAGTATCCCAGTTGAAGAGGTAGCAGACTaGTTCATTTCTATTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EMVSIIKRNQHHHGSIPVEEVAD*FISIVR Trigger: CCTTACAATAGAAATGAACAAGTCTGCTACCTCTTC...AACTGGGATACTACCGTGATGGTGTTGATTTCTTTTAATGATGCTTACCATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTTTCGATTTGTTTCTTTACAATGCAGCTAGTGTGTTACCATTCATCTTACCCCCACATAACTGCTTaGACAATGCTTGTAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSICFFTMQLVCYHSSYPHITA*TMLVKL Trigger: CAACTTTACAAGCATTGTCAAAGCAGTTATGTGGGG...GTAAGATGAATGGTAACACACTAGCTGCATTGTAAAGAAACAAATCGAAACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATAAATCTACATTCGTACAAGTGTGTCTTCTGTTGAAGTCCAGAGACAAGAGCTTTGGCCAAATCTaGTCTATCCTTTCTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNKSTFVQVCLLLKSRDKSFGQI*SILSCS Trigger: TGAACAAGAAAGGATAGACAAGATTTGGCCAAAGCT...CTTGTCTCTGGACTTCAACAGAAGACACACTTGTACGAATGTAGATTTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
||
| CDS TCA 72 bp | CCCACTCTGGTTCTGGCTCCCCCGCTGGGAAGTCTCTaGACGCTAGGCATATGGTCCTCAGGCCTTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PTLVLAPPLGSL*TLGIWSSGLLM Trigger: CATCAGAAGGCCTGAGGACCATATGCCTAGCGTTCAGAGACTTCCCAGCGGGGGAGCCAGAACCAGAGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000219090.2 |
||
| CDS CCA 72 bp | AAGGCCGGTGACGACATCATTCTCATTATCCCACTCTaGTTCTGGCTCCCCCGCTGGGAAGTCTCTGAACGC | + |
|
Preference number: 6 (lower is better) Translates to: KAGDDIILIIPL*FWLPRWEVSER Trigger: GCGTTCAGAGACTTCCCAGCGGGGGAGCCAGAACCAGAGTGGGATAATGAGAATGATGTCGTCACCGGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000219090.2 |
||
| CDS TCA 72 bp | AGGCTTATTTCTACCATAAGGCTTCCGAAGCAGGAGTaGCTCGGTGGGTGGTTCCGTAGCCAGAGCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLISTIRLPKQE*LGGWFRSQSQG Trigger: TCCCTGGCTCTGGCTACGGAACCACCCACCGAGTCACTCCTGCTTCGGAAGCCTTATGGTAGAAATAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000220124.2 |
||
| CDS CCA 72 bp | CATTCACCACTCGGATATCATGATGCTGGCTGGCGATaGAGGGTTGTCGCCTTAGAGCCCCCTGAATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HSPLGYHDAGWR*RVVALEPPEWN Trigger: GTTCCATTCAGGGGGCTCTAAGGCGACAACCCTCCATCGCCAGCCAGCATCATGATATCCGAGTGGTGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220104.2 |
||
| CDS TCA 72 bp | TGGCTGGCGATGGAGGGTTGTCGCCTTAGAGCCCCCTaGATGGAACTTCCACTCTGGAAAGCATTCACTACA | + |
|
Preference number: 6 (lower is better) Translates to: WLAMEGCRLRAP*MELPLWKAFTT Trigger: TGTAGTGAATGCTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCGACAACCCTCCATCGCCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS CCA 72 bp | GAAATGCATTCACCACTCGGATATCATGATGCTGGCTaGCGATGGAGGGTTGTCGCCTTAGAGCCCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EMHSPLGYHDAG*RWRVVALEPPE Trigger: TTCAGGGGGCTCTAAGGCGACAACCCTCCATCGCCAGCCAGCATCATGATATCCGAGTGGTGAATGCATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220104.2 |
||
| CDS CCA 72 bp | ACGCTAGGCATATGGTCCTCAGGCCTTCTGATGCCATaGGCTCGATCACAGTTTTCACAATGTCATCGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLGIWSSGLLMP*ARSQFSQCHRG Trigger: ACCGCGATGACATTGTGAAAACTGTGATCGAGCCCATGGCATCAGAAGGCCTGAGGACCATATGCCTAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000219090.2 |
||
| CDS CCA 72 bp | CACAAGATCTGGCCACGCCGCAACTCCCTTTCGGCATaGTCAATCTCTTCAACATCCTCTGCTAATTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HKIWPRRNSLSA*SISSTSSANSS Trigger: GGAGGAATTAGCAGAGGATGTTGAAGAGATTGACCATGCCGAAAGGGAGTTGCGGCGTGGCCAGATCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020107.8 ENSMUST00000218948.2 ENSMUST00000220104.2 ENSMUST00000220124.2 |
||
| CDS CCA 72 bp | TGGCGATGGAGGGTTGTCGCCTTAGAGCCCCCTGAATaGAACTTCCACTCTGGAAAGCATTCACTACATCCA | + |
|
Preference number: 6 (lower is better) Translates to: WRWRVVALEPPE*NFHSGKHSLHP Trigger: TGGATGTAGTGAATGCTTTCCAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCGACAACCCTCCATCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220104.2 ENSMUST00000220124.2 |
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| CDS CCA 72 bp | ATGCCATCAGCTGGAAGAAGGTCACCGTACTTCACTTaGGCAATGTCTCCAACAGTAATGTCAGCTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: MPSAGRRSPYFT*AMSPTVMSATG Trigger: ACCTGTAGCTGACATTACTGTTGGAGACATTGCCCAAGTGAAGTACGGTGACCTTCTTCCAGCTGATGGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000219624.2 |
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| CDS CAA 72 bp | AAATCCAAGAGAAACCCCAACAAGGCACACTCTGTTTaGTTACCCACATGGCGGGGTAATCCACCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: KSKRNPNKAHSV*LPTWRGNPPSF Trigger: GAAAGAGGGTGGATTACCCCGCCATGTGGGTAACAAAACAGAGTGTGCCTTGTTGGGGTTTCTCTTGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS CCA 72 bp | CACAGAAATCCCCGTTACCAGGTAGGACAGGATATTTaGTGGGATGGCTTCTGGTTCCGGAACCTTTTTATA | + |
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Preference number: 6 (lower is better) Translates to: HRNPRYQVGQDI*WDGFWFRNLFI Trigger: TATAAAAAGGTTCCGGAACCAGAAGCCATCCCACCAAATATCCTGTCCTACCTGGTAACGGGGATTTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS CAA 72 bp | TCACAGAAATCCCCGTTACCAGGTAGGACAGGATATTaGGTGGGATGGCTTCTGGTTCCGGAACCTTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SQKSPLPGRTGY*VGWLLVPEPFY Trigger: ATAAAAAGGTTCCGGAACCAGAAGCCATCCCACCAAATATCCTGTCCTACCTGGTAACGGGGATTTCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS CCA 72 bp | TCCCCGTTACCAGGTAGGACAGGATATTTGGTGGGATaGCTTCTGGTTCCGGAACCTTTTTATAATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SPLPGRTGYLVG*LLVPEPFYNAF Trigger: AAAAGCATTATAAAAAGGTTCCGGAACCAGAAGCCATCCCACCAAATATCCTGTCCTACCTGGTAACGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS GCA 72 bp | CCGTTACAGCTACAACCTGTCGTTGCTCTGAGACTGTaGTGTCAATTATACCTTTCACCAGTGTATGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLQLQPVVALRL*CQLYLSPVYVC Trigger: ACAAACATACACTGGTGAAAGGTATAATTGACAGCACAGTCTCAGAGCAACGACAGGTTGTAGCTGTAACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS CAA 90 bp | AAGCACAATTCACAGAAATCCCCGTTACCAGGTAGGACAGGATATTaGGTGGGATGGCTTCTGGTTCCGGAACCTTTTTATAATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KHNSQKSPLPGRTGY*VGWLLVPEPFYNAF Trigger: AAAAGCATTATAAAAAGGTTCCGGAACCAGAAGCCATCCCACCAAATATCCTGTCCTACCTGGTAACGGGGATTTCTGTGAATTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020107.8 |
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| CDS GCA 72 bp | AACCTTCATTGGGAGATGTTTTCAACTTGGTGCAAATaGCATAGACATCTCCATAGCTCTCCTGTATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NLHWEMFSTWCK*HRHLHSSPVFS Trigger: GGAAAATACAGGAGAGCTATGGAGATGTCTATGGCATTTGCACCAAGTTGAAAACATCTCCCAATGAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000219557.2 ENSMUST00000219624.2 |
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| CDS CCA 72 bp | TTCCACTTAAACCTTCATTGGGAGATGTTTTCAACTTaGTGCAAATGCCATAGACATCTCCATAGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FHLNLHWEMFST*CKCHRHLHSSP Trigger: AGGAGAGCTATGGAGATGTCTATGGCATTTGCACCAAGTTGAAAACATCTCCCAATGAAGGTTTAAGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020107.8 ENSMUST00000219557.2 ENSMUST00000219624.2 |
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| CDS CAA 72 bp | TTGAAACACTTTTTCAGAATGATCTCGGAGGCACCCTaGCTAAAGATGCGGAAACTTCCATCTGAGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LKHFFRMISEAP*LKMRKLPSEFF Trigger: GAAAAACTCAGATGGAAGTTTCCGCATCTTTAGCAAGGGTGCCTCCGAGATCATTCTGAAAAAGTGTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020107.8 ENSMUST00000219090.2 |
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