RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2A3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020788

Ensembl transcript IDs: ENSMUST00000021142.8, ENSMUST00000108484.8, ENSMUST00000108485.9, ENSMUST00000108486.8, ENSMUST00000163326.8

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTAGCTTCCCCTCCTaGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGG +
Preference number: 1 (lower is better)
Translates to: ARWLCNQLWLLSFPS*TQLLGQSSREGQKW
Trigger: CCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTaGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAG +
Preference number: 1 (lower is better)
Translates to: PGDQAASDKVSHQAG*QEKLTWTQGCLESQ
Trigger: CTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR TCA 90 bp CAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTaGCATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCAT +
Preference number: 1 (lower is better)
Translates to: QQVTKYHTRLGGRRS*HGPRDAWSLRHQGH
Trigger: ATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR GCA 90 bp GACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTaGCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGA +
Preference number: 1 (lower is better)
Translates to: DTGVDLVEAEPSGRS*LSLCSQLDPDGSLR
Trigger: TCTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 90 bp GGGGCCGGCCGGCACATATATAAACAGACACAGGAGTGGACTTGGTaGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCAC +
Preference number: 1 (lower is better)
Translates to: GAGRHIYKQTQEWTW*KLSQVEGAASPCVH
Trigger: GTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATATATGTGCCGGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR TCA 90 bp AGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTaGCAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATG +
Preference number: 1 (lower is better)
Translates to: RRSRAKSNARGPGSK*QSITPGWVAGEADM
Trigger: CATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR TCA 90 bp GCCGGCACATATATAAACAGACACAGGAGTGGACTTGGTGGAAGCTaGGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGA +
Preference number: 1 (lower is better)
Translates to: AGTYINRHRSGLGGS*AKWKELPLLVFTAG
Trigger: TCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATATATGTGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTaGGCACAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTA +
Preference number: 1 (lower is better)
Translates to: PQTHTFISPSETISK*AQRSAPAKPSLQTL
Trigger: TAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp GCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTCAGGAGACGGGTGGCTaGGTGTGGAGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ADMDPGMPGVSDTRGIDGQETGG*VWRQGW
Trigger: CCACCCCTGCCTCCACACTCAGCCACCCGTCTCCTG...ACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGACCCAGGGATGCCTaGAGTCTCAGACACCAGGGG +
Preference number: 2 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRGPRDA*SLRHQG
Trigger: CCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCC...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CAA 90 bp GAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATaGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: EVSQPAQAHSWERES*SRPAPCFLCSYLPV
Trigger: CACAGGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp GCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTCACCCTGAGCCAACCTaGGCTGAGGAAGTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: ADMDPGMPGVSDTRGIDGHPEPT*AEEVSL
Trigger: GAGGCTCACTTCCTCAGCTCAGGTTGGCTCAGGGTG...ACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAAGCTGGGGTGGGGAATaGGCGGTGGCTCTGCAATCA +
Preference number: 2 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGSWGGE*AVALQS
Trigger: TGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCT...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGGGTCCAGGAGACGGGTaGCTGAGTGTGGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: WKELPLLVFTAGPRWFPQGPGDG*LSVEAG
Trigger: CCCTGCCTCCACACTCAGCCACCCGTCTCCTGGACC...CTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGGGTCCAGGAGACGGGTaGCTGAGTGTGGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GQPNTEFICLQGRLRGLLGPGDG*LSVEAG
Trigger: CCCTGCCTCCACACTCAGCCACCCGTCTCCTGGACC...CAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTGGTCCAGGAGACGGGTaGCTGAGTGTGGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLGPGDG*LSVEAG
Trigger: CCCTGCCTCCACACTCAGCCACCCGTCTCCTGGACC...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCACCTGGACTCAGCTTCTaGGCCAGAGCAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPPGLSF*ARAVGR
Trigger: CCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGG...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGGAAAGGTTGCAGAGCTaGGGTGGGGAATGCGCGGTG +
Preference number: 2 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMERLQS*GGECAV
Trigger: CACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTC...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGGAAAGGTTGCAGAGCTaGGGTGGGGAATGCGCGGTG +
Preference number: 2 (lower is better)
Translates to: PGDQAASDKVSHQAGWQEERLQS*GGECAV
Trigger: CACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTC...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGAAAGGTTGCAGAGCTaGGGTGGGGAATGCGCGGTG +
Preference number: 2 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRERLQS*GGECAV
Trigger: CACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTC...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp GCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACAGTTCCTATCTGCCTGTaGTCCTTCAACCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AGWQEKLTWTQGCLESQTVPICL*SFNPLG
Trigger: CCCCAGGGGGTTGAAGGATCACAGGCAGATAGGAAC...TGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGGTGTGGAGGCAGGGGTaGGAACAGGACAAATGCCTG +
Preference number: 2 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGVWRQG*EQDKCL
Trigger: CAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACAC...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGTGTGGAGGCAGGGGTaGGAACAGGACAAATGCCTG +
Preference number: 2 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPVWRQG*EQDKCL
Trigger: CAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACAC...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp ATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATCTTAGCTTCCCCTCCTaGACTCAGCTTCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: IGLRSASQRRLTPGKGSHLSFPS*TQLLGQ
Trigger: CTGGCCCAGAAGCTGAGTCCAGGAGGGGAAGCTAAG...ATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACGTTGCAGAGCTGGGGTaGGGAATGCGCGGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: VEAEPSGRSCLSLCSQLDVAELG*GMRGGS
Trigger: AGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAAC...GTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCGTTGCAGAGCTGGGGTaGGGAATGCGCGGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GKGVIVQARPLLLMFLSAVAELG*GMRGGS
Trigger: AGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAAC...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGTTGCAGAGCTGGGGTaGGGAATGCGCGGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDVAELG*GMRGGS
Trigger: AGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAAC...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp CAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACAGGAGACGGGTGGCTaGGTGTGGAGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: QPNTEFICLQGRLRGLLLQETGG*VWRQGW
Trigger: CCACCCCTGCCTCCACACTCAGCCACCCGTCTCCTG...TAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCAGGAGACGGGTGGCTaGGTGTGGAGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQAQETGG*VWRQGW
Trigger: CCACCCCTGCCTCCACACTCAGCCACCCGTCTCCTG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCTGTaGTCCTTCAACCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYVPICL*SFNPLG
Trigger: CCCCAGGGGGTTGAAGGATCACAGGCAGATAGGAAC...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTGTGGGGAATGCGCGGTaGCTCTGCAATCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLVGNAR*LCNQLW
Trigger: CCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCAC...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGGTGGGGAATGCGCGGTaGCTCTGCAATCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: VMPGDQAASDKVSHQAGWVGNAR*LCNQLW
Trigger: CCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCAC...CCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCACACAGGAGTGGACTTaGTGGAAGCTGAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: AEVSQPAQAHSWERESLSTQEWT*WKLSQV
Trigger: CACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGT...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCACAGGAGACGGGTGGCTaGGTGTGGAGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: LFLHQKQSASGHSALLLPQETGG*VWRQGW
Trigger: CCACCCCTGCCTCCACACTCAGCCACCCGTCTCCTG...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCGTAAGAAGGCCCCCATaGGTCCTCCATCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GKGVIVQARPLLLMFLSAVRRPP*VLHQGR
Trigger: TCTGCCCTGATGGAGGACTCATGGGGGCCTTCTTAC...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTGTAAGAAGGCCCCCATaGGTCCTCCATCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPVRRPP*VLHQGR
Trigger: TCTGCCCTGATGGAGGACTCATGGGGGCCTTCTTAC...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCGTAAGAAGGCCCCCATaGGTCCTCCATCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEAVRRPP*VLHQGR
Trigger: TCTGCCCTGATGGAGGACTCATGGGGGCCTTCTTAC...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCACCCTGAGCCAACCTaGGCTGAGGAAGTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWHPEPT*AEEVSL
Trigger: GAGGCTCACTTCCTCAGCTCAGGTTGGCTCAGGGTG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGCCAAGTGGAAGGAGCTaGCTCTCCTTGTGTTCACAG +
Preference number: 2 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMPSGRS*LSLCSQ
Trigger: CTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp AAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGGTGTGGAGGCAGGGGTaGGAACAGGACAAATGCCTG +
Preference number: 2 (lower is better)
Translates to: KLSQVEGAASPCVHSWTQVWRQG*EQDKCL
Trigger: CAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACAC...CTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTCTTAGCTTCCCCTCCTaGACTCAGCTTCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLLSFPS*TQLLGQ
Trigger: CTGGCCCAGAAGCTGAGTCCAGGAGGGGAAGCTAAG...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCTTAGCTTCCCCTCCTaGACTCAGCTTCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADLSFPS*TQLLGQ
Trigger: CTGGCCCAGAAGCTGAGTCCAGGAGGGGAAGCTAAG...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp ACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCCTCTGCAATCAGCTCTaGCTTCTTAGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: TAGPRWFPQTPPTHSGPGLCNQL*LLSFPS
Trigger: GGAGGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAG...GCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCTCACACCAGGCTGGGTaGCAGGAGAAGCTGACATGG +
Preference number: 2 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEASHQAG*QEKLTW
Trigger: CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGA...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CAA 90 bp GTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTaGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: VDLVEAEPSGRSCLS*CSQLDPDGSLRLLL
Trigger: TAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCAGGAGACGGGTGGCTaGGTGTGGAGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: THLYFSIRNNQQVGTALCQETGG*VWRQGW
Trigger: CCACCCCTGCCTCCACACTCAGCCACCCGTCTCCTG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCCCTGGACTCAGCTTCTaGGCCAGAGCAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVPGLSF*ARAVGR
Trigger: CCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGG...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACACCTGGACTCAGCTTCTaGGCCAGAGCAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTPGLSF*ARAVGR
Trigger: CCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGG...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTTAGCTTCCCCTCCTaGACTCAGCTTCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SWERESLSRPAPCFLCSYLSFPS*TQLLGQ
Trigger: CTGGCCCAGAAGCTGAGTCCAGGAGGGGAAGCTAAG...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACGTTGCAGAGCTGGGGTaGGGAATGCGCGGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHVAELG*GMRGGS
Trigger: AGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAAC...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACAAAACAGACACAGGAGTaGACTTGGTGGAAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AGWQEKLTWTQGCLESQTKQTQE*TWWKLS
Trigger: GCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTT...TGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGTAAGAAGGCCCCCATaGGTCCTCCATCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASVRRPP*VLHQGR
Trigger: TCTGCCCTGATGGAGGACTCATGGGGGCCTTCTTAC...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAAATGCGCGGTGGCTCTaGAATCAGCTCTGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKNARWL*NQLWLL
Trigger: AAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATT...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGTGTGGAGGCAGGGGTaGGAACAGGACAAATGCCTG +
Preference number: 2 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASVWRQG*EQDKCL
Trigger: CAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACAC...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGCCTGGACTCAGCTTCTaGGCCAGAGCAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQPGLSF*ARAVGR
Trigger: CCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGG...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCCTCTGCAATCAGCTCTaGCTTCTTAGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEALCNQL*LLSFPS
Trigger: GGAGGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAG...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCCTCTGCAATCAGCTCTaGCTTCTTAGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GKGVIVQARPLLLMFLSALCNQL*LLSFPS
Trigger: GGAGGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAG...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCGTGGGGAATGCGCGGTaGCTCTGCAATCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFVGNAR*LCNQLW
Trigger: CCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCAC...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGAAAGGTTGCAGAGCTaGGGTGGGGAATGCGCGGTG +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQAERLQS*GGECAV
Trigger: CACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTC...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTGAAAGGTTGCAGAGCTaGGGTGGGGAATGCGCGGTG +
Preference number: 2 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTERLQS*GGECAV
Trigger: CACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTC...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGGTTCCTATCTGCCTGTaGTCCTTCAACCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLVPICL*SFNPLG
Trigger: CCCCAGGGGGTTGAAGGATCACAGGCAGATAGGAAC...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGTGTGGAGGCAGGGGTaGGAACAGGACAAATGCCTG +
Preference number: 2 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQVWRQG*EQDKCL
Trigger: CAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACAC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGGGTCCAGGAGACGGGTaGCTGAGTGTGGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PQTHTFISPSETISKWAQGPGDG*LSVEAG
Trigger: CCCTGCCTCCACACTCAGCCACCCGTCTCCTGGACC...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCTTAGCTTCCCCTCCTaGACTCAGCTTCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQALSFPS*TQLLGQ
Trigger: CTGGCCCAGAAGCTGAGTCCAGGAGGGGAAGCTAAG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCTCTGCAATCAGCTCTaGCTTCTTAGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWLCNQL*LLSFPS
Trigger: GGAGGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGCGCAGGCTCACTCCTaGGAAAGGGAGTCATTGTCC +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQAAQAHS*ERESLS
Trigger: GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGC...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGCAGGAGAAGCTGACATaGACCCAGGGATGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQQEKLT*TQGCLE
Trigger: CTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTG...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTCAGGAGAAGCTGACATaGACCCAGGGATGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTQEKLT*TQGCLE
Trigger: CTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTG...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTTCACACCAGGCTGGGTaGCAGGAGAAGCTGACATGG +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQASHQAG*QEKLTW
Trigger: CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGA...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTAGTATCACACCAGGCTaGGTGGCAGGAGAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASSITPG*VAGEAD
Trigger: GTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACT...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCAGTTCCTATCTGCCTGTaGTCCTTCAACCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LFLHQKQSASGHSALLLPVPICL*SFNPLG
Trigger: CCCCAGGGGGTTGAAGGATCACAGGCAGATAGGAAC...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCCACCCTGAGCCAACCTaGGCTGAGGAAGTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALHPEPT*AEEVSL
Trigger: GAGGCTCACTTCCTCAGCTCAGGTTGGCTCAGGGTG...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTAATGCGCGGTGGCTCTaGAATCAGCTCTGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASNARWL*NQLWLL
Trigger: AAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATT...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCCCTGGACTCAGCTTCTaGGCCAGAGCAGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALPGLSF*ARAVGR
Trigger: CCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGG...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACACTCTGCAATCAGCTCTaGCTTCTTAGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTLCNQL*LLSFPS
Trigger: GGAGGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAG...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGGTTGCAGAGCTGGGGTaGGGAATGCGCGGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: PQTHTFISPSETISKWAQVAELG*GMRGGS
Trigger: AGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAAC...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGGGACCCAGGGATGCCTaGAGTCTCAGACACCAGGGG +
Preference number: 2 (lower is better)
Translates to: PQTHTFISPSETISKWAQGPRDA*SLRHQG
Trigger: CCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCC...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTAGTATCACACCAGGCTaGGTGGCAGGAGAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTSITPG*VAGEAD
Trigger: GTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACT...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTAGTATCACACCAGGCTaGGTGGCAGGAGAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQASITPG*VAGEAD
Trigger: GTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACT...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTAATGCGCGGTGGCTCTaGAATCAGCTCTGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: QRVMPGDQAASDKVSHQANARWL*NQLWLL
Trigger: AAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATT...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGACACAGGAGTGGACTTaGTGGAAGCTGAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQTQEWT*WKLSQV
Trigger: CACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGT...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR TCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGGTTCCTATCTGCCTGTaGTCCTTCAACCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PQTHTFISPSETISKWAQVPICL*SFNPLG
Trigger: CCCCAGGGGGTTGAAGGATCACAGGCAGATAGGAAC...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGAATGCGCGGTGGCTCTaGAATCAGCTCTGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: PLFLHQKQSASGHSALLLNARWL*NQLWLL
Trigger: AAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATT...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCAACACAGGAGTGGACTTaGTGGAAGCTGAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: LFLHQKQSASGHSALLLPTQEWT*WKLSQV
Trigger: CACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGT...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGAAACAGACACAGGAGTaGACTTGGTGGAAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLKQTQE*TWWKLS
Trigger: GCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTT...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCCCAAGTGGAAGGAGCTaGCTCTCCTTGTGTTCACAG +
Preference number: 2 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALPSGRS*LSLCSQ
Trigger: CTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCACACAGGAGTGGACTTaGTGGAAGCTGAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: THLYFSIRNNQQVGTALCTQEWT*WKLSQV
Trigger: CACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGT...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCAAAACAGACACAGGAGTaGACTTGGTGGAAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LFLHQKQSASGHSALLLPKQTQE*TWWKLS
Trigger: GCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTT...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR GCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCAGATTCCCCACGAGATaGTTTCTTTCAGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: THLYFSIRNNQQVGTALCRFPTR*FLSVGR
Trigger: CCTCCCCACTGAAAGAAAGCATCTCGTGGGGAATCT...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGACACAGGAGTGGACTTaGTGGAAGCTGAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: PQTHTFISPSETISKWAQTQEWT*WKLSQV
Trigger: CACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGT...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGAAACAGACACAGGAGTaGACTTGGTGGAAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PQTHTFISPSETISKWAQKQTQE*TWWKLS
Trigger: GCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTT...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp AGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTaGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: RAEVSQPAQAHS*ERESLSRPAPC
Trigger: GCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp CAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATaGGAGACGGGAACCTGGGACCAGACGGAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: QLLGQSSREGQK*ETGTWDQTERW
Trigger: CCACCTCTCCGTCTGGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp TTCGCCCATCTCCAAGCGGGGGAAAGGTTGCAGAGCTaGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCT +
Preference number: 3 (lower is better)
Translates to: FAHLQAGERLQS*GGECAVALQSA
Trigger: AGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCCCCGCTTGGAGATGGGCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CAA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTGGGAAAGGGAGTCATaGTCCAGGCCCGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLWERES*SRPAPC
Trigger: GCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR TCA 72 bp GGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTaGGGGCCACACTGGAGACTCCCCTCTGCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: GGNRTNAWMLSV*GPHWRLPSAPR
Trigger: CCTGGGAGCAGAGGGGAGTCTCCAGTGTGGCCCTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
3UTR CCA 72 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTaGCTCTGCAATCAGCTCTGGCTTCTTAGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: GKGCRAGVGNAR*LCNQLWLLSFP
Trigger: GGGGAAGCTAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CAA 90 bp ATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATGACACAGGAGTGGACTaGGTGGAAGCTGAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: IGLRSASQRRLTPGKGSHDTGVD*VEAEPS
Trigger: ACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTC...ATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CAA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCTGGGAAAGGGAGTCATaGTCCAGGCCCGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVWERES*SRPAPC
Trigger: GCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp GAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATaGTTCCCTCAGACTCCTCCTACCCATAGCGGACCA +
Preference number: 3 (lower is better)
Translates to: ELPLLVFTAGPR*FPQTPPTHSGP
Trigger: TGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp CAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTaGCAGGAGAAGCTGACATGGACCCAGGGATGCCTG +
Preference number: 3 (lower is better)
Translates to: QAASDKVSHQAG*QEKLTWTQGCL
Trigger: CAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CAA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTGACACAGGAGTGGACTaGGTGGAAGCTGAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPDTGVD*VEAEPS
Trigger: ACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTC...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR TCA 72 bp ACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTaGCATGGACCCAGGGATGCCTGGAGTCTCAGACAC +
Preference number: 3 (lower is better)
Translates to: TKYHTRLGGRRS*HGPRDAWSLRH
Trigger: GTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp AGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTaGGACCAGACGGAGAGGTGGCCATTCCTGTTTAAG +
Preference number: 3 (lower is better)
Translates to: SSREGQKWETGT*DQTERWPFLFK
Trigger: CTTAAACAGGAATGGCCACCTCTCCGTCTGGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTaGACCCAGATGGTTCCCTCAGACTCCTCCTACCCA +
Preference number: 3 (lower is better)
Translates to: QVEGAASPCVHS*TQMVPSDSSYP
Trigger: TGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp GGGGCCGGCCGGCACATATATAAACAGACACAGGAGTaGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: GAGRHIYKQTQE*TWWKLSQVEGA
Trigger: AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATATATGTGCCGGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR GCA 72 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTaGTTCTTATGTTCCTATCTGCCTGTGATCCTTCAA +
Preference number: 3 (lower is better)
Translates to: SWERESLSRPAP*FLCSYLPVILQ
Trigger: TTGAAGGATCACAGGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR-3UTR CAA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCGACACAGGAGTGGACTaGGTGGAAGCTGAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFDTGVD*VEAEPS
Trigger: ACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTC...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
3UTR CCA 72 bp CATCTGATAGATTCCCCACGAGATGCTTTCTTTCAGTaGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCAC +
Preference number: 3 (lower is better)
Translates to: HLIDSPRDAFFQ*GGRGGSPLWSH
Trigger: GTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTGGGGAATCTATCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCCCAGATCTGGTGGGTTaGAGCCAAGGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AEVSQPAQAHSWERESLSPDLVG*SQGLWP
Trigger: CGGCCACAGCCCTTGGCTTCAACCCACCAGATCTGG...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCGCGCGTCGGTCACCTaGTCCAGGCTCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADRASVT*SRLKPP
Trigger: GGGCGGCTTGAGCCTGGAGCAGGTGACCGACGCGCG...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGAATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTACAGGCTGCTCCCCTTaGCTCACTTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GIGLRSASQRRLTPGKGSTGCSP*LTSPSG
Trigger: CCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGT...ACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGAATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTGGGGTGCTGTTCGGCTaGCCACTCGGACTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: GIGLRSASQRRLTPGKGSGVLFG*PLGLSY
Trigger: GTAGCTCAGTCCGAGTGGGCAGCCGAACAGCACCCC...ACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCCGACAAGCCTGGCGCTaGTGCTCTGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLRQAWR*CSGLRS
Trigger: TGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCG...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCCAAAGCACCGGGCAGTaGGACAAGCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AEVSQPAQAHSWERESLSQSTGQ*DKPGAA
Trigger: AGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTG...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTCAAAGCACCGGGCAGTaGGACAAGCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLQSWGGECAVALQSALAQSTGQ*DKPGAA
Trigger: AGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTG...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCGGGGTGTGTCCCTGGTaGCCAAGGCTAAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLGVCPW*PRLSSA
Trigger: TGCGCTGCTTAGCCTTGGCCACCAGGGACACACCCC...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCGCAGTGCGACAAGCCTaGCGCTGCTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FWARAVGRDRNGRREPGTAVRQA*RCCSGL
Trigger: CAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGC...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGACCAGATCTGGTGGGTTaGAGCCAAGGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRPDLVG*SQGLWP
Trigger: CGGCCACAGCCCTTGGCTTCAACCCACCAGATCTGG...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCGCGCGTCGGTCACCTaGTCCAGGCTCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWRASVT*SRLKPP
Trigger: GGGCGGCTTGAGCCTGGAGCAGGTGACCGACGCGCG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCATCCAGCTTGCGCTaGAATGGCGTCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RLQSWGGECAVALQSALASSSLR*NGVRSG
Trigger: GCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGA...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGACAGGCTGCTCCCCTTaGCTCACTTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRTGCSP*LTSPSG
Trigger: CCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGT...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGGGGGTGCTGTTCGGCTaGCCACTCGGACTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMGVLFG*PLGLSY
Trigger: GTAGCTCAGTCCGAGTGGGCAGCCGAACAGCACCCC...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGCGACAAGCCTGGCGCTaGTGCTCTGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGRQAWR*CSGLRS
Trigger: TGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCG...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGCAAAGCACCGGGCAGTaGGACAAGCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMQSTGQ*DKPGAA
Trigger: AGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTG...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACAGCTTGCGCTGCAATaGCGTCCGCTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGWQEKLTWTQGCLESQTQLALQ*RPLRLH
Trigger: GTGGAGCCTGAGCGGACGCCATTGCAGCGCAAGCTG...TGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGACAGCTTGCGCTGCAATaGCGTCCGCTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGQLALQ*RPLRLH
Trigger: GTGGAGCCTGAGCGGACGCCATTGCAGCGCAAGCTG...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTAGGGGTGTGTCCCTGGTaGCCAAGGCTAAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: AELGWGMRGGSAISSGFLGVCPW*PRLSSA
Trigger: TGCGCTGCTTAGCCTTGGCCACCAGGGACACACCCC...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGGGGTGTGTCCCTGGTaGCCAAGGCTAAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPGVCPW*PRLSSA
Trigger: TGCGCTGCTTAGCCTTGGCCACCAGGGACACACCCC...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAAGCAGTGCGACAAGCCTaGCGCTGCTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSFWARAVGRDRNGRREAVRQA*RCCSGL
Trigger: CAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGC...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAGCAGTGCGACAAGCCTaGCGCTGCTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WTQLLGQSSREGQKWETGAVRQA*RCCSGL
Trigger: CAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGC...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTACAGTGTGTCAGAGCCTaGGCCCCAGTCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: AELGWGMRGGSAISSGFLQCVRA*APVPDL
Trigger: AAGATCCGGGACTGGGGCTCAGGCTCTGACACACTG...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCGCTGCTGCTCTGGGCTaGGGTCATCAAACTCACGGC +
Preference number: 4 (lower is better)
Translates to: FWARAVGRDRNGRREPGTAAALG*GHQTHG
Trigger: GCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGC...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAGGCCACAGCAGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKGHSSA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACTGCTGTGGCC...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTGGCCACAGCAGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPGHSSA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACTGCTGTGGCC...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTCTGCCAGCAGCAGGATaGGCACCAAGAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RLQSWGGECAVALQSALALPAAG*APRGPQ
Trigger: TTGAGGACCTCTTGGTGCGCATCCTGCTGCTGGCAG...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGATCATCCAGCTTGCGCTaGAATGGCGTCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGSSSLR*NGVRSG
Trigger: GCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGA...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCACAGGCTGCTCCCCTTaGCTCACTTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HSWERESLSRPAPCFLCSTGCSP*LTSPSG
Trigger: CCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGT...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTTCGGTGGGTCTAACATaGCCACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: ADMDPGMPGVSDTRGIDGSVGLT*PRSPRR
Trigger: CCTTCGTGGGCTGCGTGGGCATGTTAGACCCACCGA...ACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCGGCCCGTGTAGGCCTTaGCCAACACATCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: FWARAVGRDRNGRREPGTGPCRP*PTHPPC
Trigger: ACACGGAGGATGTGTTGGGCAAGGCCTACACGGGCC...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGAGGCCCGTGTAGGCCTTaGCCAACACATCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRGPCRP*PTHPPC
Trigger: ACACGGAGGATGTGTTGGGCAAGGCCTACACGGGCC...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGCAAGCCTGGCGCTGCTaGTCTGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTG...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATCAAAGCACCGGGCAGTaGGACAAGCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYQSTGQ*DKPGAA
Trigger: AGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTG...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGGGCGATGCCGATCTCTaGCTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGGDADL*LLQGWC
Trigger: GCACCAGCCCTGAAGAAGGCAGAGATCGGCATCGCC...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTCCACAGCCGCCATCTaGCTCCGAATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IGLRSASQRRLTPGKGSHSTAAI*LRILPS
Trigger: GCTGGGCAAGATTCGGAGCCAGATGGCGGCTGTGGA...ATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGTCCACAGCCGCCATCTaGCTCCGAATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGSTAAI*LRILPS
Trigger: GCTGGGCAAGATTCGGAGCCAGATGGCGGCTGTGGA...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGAATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTGCCGGGTCAGCAAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: GIGLRSASQRRLTPGKGSAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTTGCTGACCCGGC...ACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTGCAGAGGGCACAGATaGTGGCGAGCTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: LQSWGGECAVALQSALASCRGHR*WRAPLA
Trigger: GGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCA...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCCATGTCCTCCTTCCTTaGGGGTGTGTCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FWARAVGRDRNGRREPGTHVLLP*GCVPGG
Trigger: GCCACCAGGGACACACCCCCAAGGAAGGAGGACATG...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGACATGTCCTCCTTCCTTaGGGGTGTGTCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGHVLLP*GCVPGG
Trigger: GCCACCAGGGACACACCCCCAAGGAAGGAGGACATG...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTGCAGTGCGACAAGCCTaGCGCTGCTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLAVRQA*RCCSGL
Trigger: CAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGC...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGGCTGCCCACTCGGACTaGGCTACAGCGCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGAAHSD*ATALNY
Trigger: GTAATTGAGCGCTGTAGCTCAGTCCGAGTGGGCAGC...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGCTGCCCACTCGGACTaGGCTACAGCGCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPAAHSD*ATALNY
Trigger: GTAATTGAGCGCTGTAGCTCAGTCCGAGTGGGCAGC...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCCAGTGTGTCAGAGCCTaGGCCCCAGTCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: HSWERESLSRPAPCFLCSQCVRA*APVPDL
Trigger: AAGATCCGGGACTGGGGCTCAGGCTCTGACACACTG...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCGGCCACAGCAGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTGHSSA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACTGCTGTGGCC...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp AGTGTGGAGGCAGGGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGCCAGATCTGGTGGGTTaGAGCCAAGGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SVEAGVGTGQMPGCSQSEPDLVG*SQGLWP
Trigger: CGGCCACAGCCCTTGGCTTCAACCCACCAGATCTGG...CTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACACAGGCTGCTCCCCTTaGCTCACTTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VEAEPSGRSCLSLCSQLDTGCSP*LTSPSG
Trigger: CCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGT...GTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGACAGGCTGCTCCCCTTaGCTCACTTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WKELPLLVFTAGPRWFPQTGCSP*LTSPSG
Trigger: CCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGT...CTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGGGTGCTGTTCGGCTaGCCACTCGGACTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDGVLFG*PLGLSY
Trigger: GTAGCTCAGTCCGAGTGGGCAGCCGAACAGCACCCC...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCGGGGTGCTGTTCGGCTaGCCACTCGGACTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPGVLFG*PLGLSY
Trigger: GTAGCTCAGTCCGAGTGGGCAGCCGAACAGCACCCC...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCGACAAGCCTGGCGCTaGTGCTCTGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPRQAWR*CSGLRS
Trigger: TGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCG...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTCGACAAGCCTGGCGCTaGTGCTCTGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPRQAWR*CSGLRS
Trigger: TGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCG...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAAGGCGATGCCGATCTCTaGCTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLSFWARAVGRDRNGRREGDADL*LLQGWC
Trigger: GCACCAGCCCTGAAGAAGGCAGAGATCGGCATCGCC...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCGGGCAGGCCCAGAATTaGTGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLGQAQN*CEEDAD
Trigger: GTCTGCATCTTCCTCACAGCAATTCTGGGCCTGCCC...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCACACGGCTCGGGGGTCTaGAATGGCATCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPHGSGV*NGICVL
Trigger: AAGCACACAGATGCCATTCCAGACCCCCGAGCCGTG...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTAGAGGGCACAGATGGTaGCGAGCTCCACTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQSWGGECAVALQSALASRGHRW*RAPLAH
Trigger: ATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCT...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCAGGGCGGTCTCTGTaGCCTCTCCTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RLQSWGGECAVALQSALASGRSL*PLLPSH
Trigger: ATGAGAAGGTAGGAGAGGCCACAGAGACCGCCCTGA...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGCCCAGTCCCGGATCTTaGCCAGGATATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMPSPGS*PGYALW
Trigger: CCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGG...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGCCCAGTCCCGGATCTTaGCCAGGATATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRPSPGS*PGYALW
Trigger: CCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGG...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCGGGGTGTGTCCCTGGTaGCCAAGGCTAAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEAGVCPW*PRLSSA
Trigger: TGCGCTGCTTAGCCTTGGCCACCAGGGACACACCCC...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTGGGGTGTGTCCCTGGTaGCCAAGGCTAAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVGVCPW*PRLSSA
Trigger: TGCGCTGCTTAGCCTTGGCCACCAGGGACACACCCC...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCCATGTCCTCCTTCCTTaGGGGTGTGTCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HSWERESLSRPAPCFLCSHVLLP*GCVPGG
Trigger: GCCACCAGGGACACACCCCCAAGGAAGGAGGACATG...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTCTGGCGCTGCTGCTCTaGGCTGAGGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: LQSWGGECAVALQSALASLALLL*AEVIKL
Trigger: GAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAG...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGCTGGCGCTGCTGCTCTaGGCTGAGGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQELALLL*AEVIKL
Trigger: GAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAG...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATGCAGTGCGACAAGCCTaGCGCTGCTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYAVRQA*RCCSGL
Trigger: CAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGC...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTACAACCCGGTGTGGTATaGGGTCCTGGAAGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: AELGWGMRGGSAISSGFLQPGVV*GPGSSR
Trigger: CCGACTACTTCCAGGACCCCATACCACACCGGGTTG...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163326.8
3UTR CAA 72 bp CAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATaGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: QPAQAHSWERES*SRPAPCFLCSY
Trigger: ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp ACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCACATCTGATTGGTGGTaGGCGTCCCCGTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: TAGPRWFPQTPPTHSGPGTSDWW*ASPSCQ
Trigger: CTGACAAGACGGGGACGCTCACCACCAATCAGATGT...GCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp ATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATACATCTGATTGGTGGTaGGCGTCCCCGTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: IGLRSASQRRLTPGKGSHTSDWW*ASPSCQ
Trigger: CTGACAAGACGGGGACGCTCACCACCAATCAGATGT...ATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATCAGTGTGTCAGAGCCTaGGCCCCAGTCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDQCVRA*APVPDL
Trigger: AAGATCCGGGACTGGGGCTCAGGCTCTGACACACTG...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCCAGTGTGTCAGAGCCTaGGCCCCAGTCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSAQCVRA*APVPDL
Trigger: AAGATCCGGGACTGGGGCTCAGGCTCTGACACACTG...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTGCTGCTGCTCTGGGCTaGGGTCATCAAACTCACGGC +
Preference number: 4 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPAAALG*GHQTHG
Trigger: GCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGC...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCGCTGCTGCTCTGGGCTaGGGTCATCAAACTCACGGC +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSAAAALG*GHQTHG
Trigger: GCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGC...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTGGCCCAGAATTGCTGTaGGGAAGATGCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: RLQSWGGECAVALQSALAGPELL*GRCRQP
Trigger: AGGTTGTCTGCATCTTCCTCACAGCAATTCTGGGCC...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCCAGATCTGGTGGGTTaGAGCCAAGGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWPDLVG*SQGLWP
Trigger: CGGCCACAGCCCTTGGCTTCAACCCACCAGATCTGG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGGGGTCACCTGAAAAATaGGAGGCAGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQEGSPEK*EAEVAP
Trigger: TGGTGCCACCTCTGCCTCTCATTTTTCAGGTGACCC...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTCGCGCGTCGGTCACCTaGTCCAGGCTCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGARASVT*SRLKPP
Trigger: GGGCGGCTTGAGCCTGGAGCAGGTGACCGACGCGCG...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCGCGCGTCGGTCACCTaGTCCAGGCTCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLRASVT*SRLKPP
Trigger: GGGCGGCTTGAGCCTGGAGCAGGTGACCGACGCGCG...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAAAAGGAAACCAGAGCTaGCAGCAGCAGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGKGNQS*QQQDAH
Trigger: GTGCGCATCCTGCTGCTGGCAGCTCTGGTTTCCTTT...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCTCATCCAGCTTGCGCTaGAATGGCGTCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEASSSLR*NGVRSG
Trigger: GCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGA...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGTCATCCAGCTTGCGCTaGAATGGCGTCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WKELPLLVFTAGPRWFPQSSSLR*NGVRSG
Trigger: GCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGA...CTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCATCCAGCTTGCGCTaGAATGGCGTCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPSSSLR*NGVRSG
Trigger: GCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGA...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCCTTGAAGTAGTAGACTaGACCACGGAGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLLEVVD*TTEPGS
Trigger: GGATCCTGGCTCCGTGGTGCAGTCTACTACTTCAAG...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCCATGCAAACGACAGGTaGCTGCCTCTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FWARAVGRDRNGRREPGTHANDR*LPLLQP
Trigger: TGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATG...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGCATGCAAACGACAGGTaGCTGCCTCTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQEHANDR*LPLLQP
Trigger: TGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATG...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTCCAGCGCAGAATCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: ADMDPGMPGVSDTRGIDGPAQNH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGG...ACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTACCAGCGCAGAATCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: AELGWGMRGGSAISSGFLPAQNH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGG...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAATCGGTGGGTCTAACATaGCCACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKSVGLT*PRSPRR
Trigger: CCTTCGTGGGCTGCGTGGGCATGTTAGACCCACCGA...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGGGCCCGTGTAGGCCTTaGCCAACACATCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: KLSQVEGAASPCVHSWTQGPCRP*PTHPPC
Trigger: ACACGGAGGATGTGTTGGGCAAGGCCTACACGGGCC...CTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGCAAGCCTGGCGCTGCTaGTCTGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: WKELPLLVFTAGPRWFPQQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTG...CTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGAATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTTGTTGTAGATGGCCCTaGCCTCTTCTACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GIGLRSASQRRLTPGKGSCCRWP*PLLLQP
Trigger: TGGCTGCAGTAGAAGAGGGCAGGGCCATCTACAACA...ACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTGGGCAGGCCCAGAATTaGTGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ADMDPGMPGVSDTRGIDGGQAQN*CEEDAD
Trigger: GTCTGCATCTTCCTCACAGCAATTCTGGGCCTGCCC...ACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCCACGGCTCGGGGGTCTaGAATGGCATCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HSWERESLSRPAPCFLCSHGSGV*NGICVL
Trigger: AAGCACACAGATGCCATTCCAGACCCCCGAGCCGTG...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGACACGGCTCGGGGGTCTaGAATGGCATCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WTQLLGQSSREGQKWETGHGSGV*NGICVL
Trigger: AAGCACACAGATGCCATTCCAGACCCCCGAGCCGTG...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAATCCACAGCCGCCATCTaGCTCCGAATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKSTAAI*LRILPS
Trigger: GCTGGGCAAGATTCGGAGCCAGATGGCGGCTGTGGA...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTGTAGTGATGACTGCTaGGAGACCCTCGGGGATAGC +
Preference number: 4 (lower is better)
Translates to: LQSWGGECAVALQSALASCSDDC*ETLGDS
Trigger: GCTATCCCCGAGGGTCTCCCAGCAGTCATCACTACA...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGGGAGGAGATGCAGGAGAGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAATGCAGAGGGCACAGATaGTGGCGAGCTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: GEEMQESGQPNTEFICLQCRGHR*WRAPLA
Trigger: GGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCA...TTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACTCTCCTGCATCTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTGCAGAGGGCACAGATaGTGGCGAGCTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLCRGHR*WRAPLA
Trigger: GGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCA...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTCAGGGCGGTCTCTGTaGCCTCTCCTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IGLRSASQRRLTPGKGSHSGRSL*PLLPSH
Trigger: ATGAGAAGGTAGGAGAGGCCACAGAGACCGCCCTGA...ATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTCAGGGCGGTCTCTGTaGCCTCTCCTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LQSWGGECAVALQSALASSGRSL*PLLPSH
Trigger: ATGAGAAGGTAGGAGAGGCCACAGAGACCGCCCTGA...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQENILLP*TLGSAR
Trigger: TCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTT...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGNILLP*TLGSAR
Trigger: TCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTT...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRPGYAL*KWCSGV
Trigger: CACCCCTGAGCACCACTTCCAGAGAGCATATCCTGG...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGTGTGTCAGAGCCTaGGCCCCAGTCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTQCVRA*APVPDL
Trigger: AAGATCCGGGACTGGGGCTCAGGCTCTGACACACTG...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGGCCACAGCAGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQGHSSA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACTGCTGTGGCC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCGGCCACAGCAGTGCCTaGGCCCATGGCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFGHSSA*AHGDAD
Trigger: ATCGGCATCGCCATGGGCTCAGGCACTGCTGTGGCC...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCACTCAGTGGGGTCACCTaGAAAATGAGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPLSGVT*KMRGRG
Trigger: ACCTCTGCCTCTCATTTTTCAGGTGACCCCACTGAG...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCCTCAGTGGGGTCACCTaGAAAATGAGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FWARAVGRDRNGRREPGTLSGVT*KMRGRG
Trigger: ACCTCTGCCTCTCATTTTTCAGGTGACCCCACTGAG...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGCTCAGTGGGGTCACCTaGAAAATGAGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQELSGVT*KMRGRG
Trigger: ACCTCTGCCTCTCATTTTTCAGGTGACCCCACTGAG...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTCTGCCAGCAGCAGGATaGGCACCAAGAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLLPAAG*APRGPQ
Trigger: TTGAGGACCTCTTGGTGCGCATCCTGCTGCTGGCAG...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCCTTCAAGGCCTCAATTaGACTCTCTGCGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLLQGLN*TLCVAF
Trigger: GAACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAG...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGCAAATTCATCCAGCTTaGGCTGCAATGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMQIHPA*AAMASA
Trigger: AGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTG...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTACTTGAAGTAGTAGACTaGACCACGGAGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: AELGWGMRGGSAISSGFLLEVVD*TTEPGS
Trigger: GGATCCTGGCTCCGTGGTGCAGTCTACTACTTCAAG...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGACTTGAAGTAGTAGACTaGACCACGGAGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGLEVVD*TTEPGS
Trigger: GGATCCTGGCTCCGTGGTGCAGTCTACTACTTCAAG...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAAGCATGTAGTGATGACTaGTGGGAGACCCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLSFWARAVGRDRNGRREACSDD*WETLGD
Trigger: ATCCCCGAGGGTCTCCCAGCAGTCATCACTACATGC...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGGGCCACACTGGAGGCATGTAGTGATGACTaGTGGGAGACCCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GWEQDKCLDALSLRATLEACSDD*WETLGD
Trigger: ATCCCCGAGGGTCTCCCAGCAGTCATCACTACATGC...CTCCAGTGTGGCCCTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACAGGTGCCTGCCTCTaGTTCAGCCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: WTQLLGQSSREGQKWETGTGACL*FSHHEH
Trigger: ATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGT...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGTCACAAACATCTTGCTaGCCTGGACCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQESQTSC*PGPWGQ
Trigger: CTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGA...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCTTCACAAACATCTTaGTGCCCTGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGWQEKLTWTQGCLESQTPSQTS*CPGPWG
Trigger: ACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGG...TGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGACCTTCACAAACATCTTaGTGCCCTGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRPSQTS*CPGPWG
Trigger: ACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGG...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACTTCTTCAGGGCTGGTaGATCATTCACCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: GLSFWARAVGRDRNGRRELLQGW*IIHPIA
Trigger: GGCGATGGGGTGAATGATGCACCAGCCCTGAAGAAG...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATCTTCTTCAGGGCTGGTaGATCATTCACCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYLLQGW*IIHPIA
Trigger: GGCGATGGGGTGAATGATGCACCAGCCCTGAAGAAG...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGGGCCACACTGGAGGGGCAGGCCCAGAATTaGTGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: GWEQDKCLDALSLRATLEGQAQN*CEEDAD
Trigger: GTCTGCATCTTCCTCACAGCAATTCTGGGCCTGCCC...CTCCAGTGTGGCCCTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCCTCGGGGGTCTGGAATaGCATCTGTGTGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: HSWERESLSRPAPCFLCSLGGLE*HLCASS
Trigger: TGACGAAGCACACAGATGCCATTCCAGACCCCCGAG...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGTCCACAGCCGCCATCTaGCTCCGAATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WERESLSRPAPCFLCSYLSTAAI*LRILPS
Trigger: GCTGGGCAAGATTCGGAGCCAGATGGCGGCTGTGGA...CAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTCAGCTTGCGCTGCAATaGCGTCCGCTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASQLALQ*RPLRLH
Trigger: GTGGAGCCTGAGCGGACGCCATTGCAGCGCAAGCTG...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCATCACAGAGATGGCATaGGACAGCTGCCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLITEMA*DSCLPN
Trigger: ATTTGGGAGGCAGCTGTCCCATGCCATCTCTGTGAT...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGAATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTATCACAGAGATGGCATaGGACAGCTGCCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GIGLRSASQRRLTPGKGSITEMA*DSCLPN
Trigger: ATTTGGGAGGCAGCTGTCCCATGCCATCTCTGTGAT...ACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTGCCGGGTCAGCAAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTTGCTGACCCGGC...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTAGAGGGCACAGATGGTaGCGAGCTCCACTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLRGHRW*RAPLAH
Trigger: ATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCT...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCAGAGGGCACAGATGGTaGCGAGCTCCACTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEARGHRW*RAPLAH
Trigger: ATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCT...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCTGCAGAGGGCACAGATaGTGGCGAGCTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTCRGHR*WRAPLA
Trigger: GGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCA...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYPGYAL*KWCSGV
Trigger: CACCCCTGAGCACCACTTCCAGAGAGCATATCCTGG...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCCAGTCCCGGATCTTaGCCAGGATATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSPSPGS*PGYALW
Trigger: CCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGG...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGGGAGGAGATGCAGGAGAGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAACTGGCGCTGCTGCTCTaGGCTGAGGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: GEEMQESGQPNTEFICLQLALLL*AEVIKL
Trigger: GAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAG...TTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACTCTCCTGCATCTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCTGGCGCTGCTGCTCTaGGCTGAGGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVLALLL*AEVIKL
Trigger: GAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAG...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGCACAGATAAGGCCATaGTTGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPAQIRP*LWGSVT
Trigger: AGTCACGCTTCCCCACAACCATGGCCTTATCTGTGC...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCGCACAGATAAGGCCATaGTTGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: TAGPRWFPQTPPTHSGPGAQIRP*LWGSVT
Trigger: AGTCACGCTTCCCCACAACCATGGCCTTATCTGTGC...GCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATACATCTGATTGGTGGTaGGCGTCCCCGTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDTSDWW*ASPSCQ
Trigger: CTGACAAGACGGGGACGCTCACCACCAATCAGATGT...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCGCTGCCCACTCGGACTaGGCTACAGCGCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTAAHSD*ATALNY
Trigger: GTAATTGAGCGCTGTAGCTCAGTCCGAGTGGGCAGC...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGCCAGATCTGGTGGGTTaGAGCCAAGGGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLPDLVG*SQGLWP
Trigger: CGGCCACAGCCCTTGGCTTCAACCCACCAGATCTGG...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGTGGCATGCGCAGCAGTaGCTGGTTCTCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWWHAQQ*LVLRDA
Trigger: AGCGTCTCTGAGAACCAGTCACTGCTGCGCATGCCA...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCGGGTCACCTGAAAAATaGGAGGCAGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEAGSPEK*EAEVAP
Trigger: TGGTGCCACCTCTGCCTCTCATTTTTCAGGTGACCC...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACTCAGTGGGGTCACCTaGAAAATGAGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLSFWARAVGRDRNGRRELSGVT*KMRGRG
Trigger: ACCTCTGCCTCTCATTTTTCAGGTGACCCCACTGAG...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCGCGTCGGTCACCTaGTCCAGGCTCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PQTHTFISPSETISKWAQRASVT*SRLKPP
Trigger: GGGCGGCTTGAGCCTGGAGCAGGTGACCGACGCGCG...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTAAAGGAAACCAGAGCTaGCAGCAGCAGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVKGNQS*QQQDAH
Trigger: GTGCGCATCCTGCTGCTGGCAGCTCTGGTTTCCTTT...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACTTCAAGGCCTCAATTaGACTCTCTGCGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: AGWQEKLTWTQGCLESQTLQGLN*TLCVAF
Trigger: GAACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAG...TGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTCTTCAAGGCCTCAATTaGACTCTCTGCGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: ADMDPGMPGVSDTRGIDGLQGLN*TLCVAF
Trigger: GAACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAG...ACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGACTTCAAGGCCTCAATTaGACTCTCTGCGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRLQGLN*TLCVAF
Trigger: GAACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAG...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTCCACCACGAACATCCTaGAGACAGACATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: LQSWGGECAVALQSALASPPRTS*RQTSDW
Trigger: CCAATCAGATGTCTGTCTGCAGGATGTTCGTGGTGG...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGACCACCACGAACATCCTaGAGACAGACATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGPPRTS*RQTSDW
Trigger: CCAATCAGATGTCTGTCTGCAGGATGTTCGTGGTGG...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCACAGGTGCCTGCCTCTaGTTCAGCCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSATGACL*FSHHEH
Trigger: ATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGT...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCATGCAAACGACAGGTaGCTGCCTCTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVHANDR*LPLLQP
Trigger: TGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATG...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTCCAGCGCAGAATCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPPAQNH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGG...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCAGCGCAGAATCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSPAQNH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGG...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAATCTTGGCCAGGATATaGTCTCTGGAAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGILARI*SLEVVL
Trigger: GAGCACCACTTCCAGAGAGCATATCCTGGCCAAGAT...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGACTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGLQSSR*MSSFLG
Trigger: CCCAAGGAAGGAGGACATGCATCTAGATGACTGCAG...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACAGGCCCGTGTAGGCCTTaGCCAACACATCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTGPCRP*PTHPPC
Trigger: ACACGGAGGATGTGTTGGGCAAGGCCTACACGGGCC...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACACAAGCCTGGCGCTGCTaGTCTGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTG...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCCTTCTTCAGGGCTGGTaGATCATTCACCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSALLQGW*IIHPIA
Trigger: GGCGATGGGGTGAATGATGCACCAGCCCTGAAGAAG...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGGGGCAGGCCCAGAATTaGTGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: KLSQVEGAASPCVHSWTQGQAQN*CEEDAD
Trigger: GTCTGCATCTTCCTCACAGCAATTCTGGGCCTGCCC...CTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGGCAGGCCCAGAATTaGTGTGAGGAAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDGQAQN*CEEDAD
Trigger: GTCTGCATCTTCCTCACAGCAATTCTGGGCCTGCCC...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCTCGGGGGTCTGGAATaGCATCTGTGTGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: VEAEPSGRSCLSLCSQLDLGGLE*HLCASS
Trigger: TGACGAAGCACACAGATGCCATTCCAGACCCCCGAG...GTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCGCCGGGTCAGCAAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTTGCTGACCCGGC...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGGCCGGGTCAGCAAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: WERESLSRPAPCFLCSYLAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTTGCTGACCCGGC...CAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCTGTAGTGATGACTGCTaGGAGACCCTCGGGGATAGC +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSACSDDC*ETLGDS
Trigger: GCTATCCCCGAGGGTCTCCCAGCAGTCATCACTACA...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTTCAGGGCGGTCTCTGTaGCCTCTCCTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVSGRSL*PLLPSH
Trigger: ATGAGAAGGTAGGAGAGGCCACAGAGACCGCCCTGA...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLPGYAL*KWCSGV
Trigger: CACCCCTGAGCACCACTTCCAGAGAGCATATCCTGG...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCTGGCGCTGCTGCTCTaGGCTGAGGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTLALLL*AEVIKL
Trigger: GAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAG...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGGATATCCAGATCTGGTaGGTTGAAGCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGDQAASDKVSHQAGWQEDIQIW*VEAKGC
Trigger: ACAGCCCTTGGCTTCAACCCACCAGATCTGGATATC...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGATATCCAGATCTGGTaGGTTGAAGCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGDIQIW*VEAKGC
Trigger: ACAGCCCTTGGCTTCAACCCACCAGATCTGGATATC...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAATGAGAGGCAGAGGTaGCACCAGGAGGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: AEVSQPAQAHSWERESLSNERQR*HQEDKK
Trigger: TTTCTTATCCTCCTGGTGCCACCTCTGCCTCTCATT...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTGCTGCTGCTCTGGGCTaGGGTCATCAAACTCACGGC +
Preference number: 4 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTAAALG*GHQTHG
Trigger: GCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGC...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCGGCCCAGAATTGCTGTaGGGAAGATGCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEAGPELL*GRCRQP
Trigger: AGGTTGTCTGCATCTTCCTCACAGCAATTCTGGGCC...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTTGGCATGCGCAGCAGTaGCTGGTTCTCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASWHAQQ*LVLRDA
Trigger: AGCGTCTCTGAGAACCAGTCACTGCTGCGCATGCCA...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCCCTCATCGAGCAGGATaGCAGGCAGAGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSAPHRAG*QAETSE
Trigger: TTCAGATGTCTCTGCCTGTCATCCTGCTCGATGAGG...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAACCTCATCGAGCAGGATaGCAGGCAGAGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKPHRAG*QAETSE
Trigger: TTCAGATGTCTCTGCCTGTCATCCTGCTCGATGAGG...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCCTGCCAGCAGCAGGATaGGCACCAAGAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVLPAAG*APRGPQ
Trigger: TTGAGGACCTCTTGGTGCGCATCCTGCTGCTGGCAG...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCAAATTCATCCAGCTTaGGCTGCAATGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPQIHPA*AAMASA
Trigger: AGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTG...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGCAAATTCATCCAGCTTaGGCTGCAATGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GQPNTEFICLQGRLRGLLQIHPA*AAMASA
Trigger: AGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTG...CAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCTTGAAGTAGTAGACTaGACCACGGAGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPLEVVD*TTEPGS
Trigger: GGATCCTGGCTCCGTGGTGCAGTCTACTACTTCAAG...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGGCATGTAGTGATGACTaGTGGGAGACCCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWACSDD*WETLGD
Trigger: ATCCCCGAGGGTCTCCCAGCAGTCATCACTACATGC...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGACCACCACGAACATCCTaGAGACAGACATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: WTQLLGQSSREGQKWETGPPRTS*RQTSDW
Trigger: CCAATCAGATGTCTGTCTGCAGGATGTTCGTGGTGG...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACAGGTGCCTGCCTCTaGTTCAGCCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWTGACL*FSHHEH
Trigger: ATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGT...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCCAGCGCAGAATCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTPAQNH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGG...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCTCACAAACATCTTGCTaGCCTGGACCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSSQTSC*PGPWGQ
Trigger: CTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGA...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCAGGGGTGCTGTTCGGCTaGCCACTCGGACTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: LFLHQKQSASGHSALLLPGVLFG*PLGLSY
Trigger: GTAGCTCAGTCCGAGTGGGCAGCCGAACAGCACCCC...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGGCCCGTGTAGGCCTTaGCCAACACATCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQGPCRP*PTHPPC
Trigger: ACACGGAGGATGTGTTGGGCAAGGCCTACACGGGCC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCAAGCCTGGCGCTGCTaGTCTGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQAQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTTCTTCAGGGCTGGTaGATCATTCACCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYLLQGW*IIHPIA
Trigger: GGCGATGGGGTGAATGATGCACCAGCCCTGAAGAAG...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCGGCGATGCCGATCTCTaGCTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFGDADL*LLQGWC
Trigger: GCACCAGCCCTGAAGAAGGCAGAGATCGGCATCGCC...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACTGTTGTAGATGGCCCTaGCCTCTTCTACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADCCRWP*PLLLQP
Trigger: TGGCTGCAGTAGAAGAGGGCAGGGCCATCTACAACA...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCAGGAGGATAAGAAAATaGAGAGCCATGGACATGACC +
Preference number: 4 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLRRIRK*RAMDMT
Trigger: GGTCATGTCCATGGCTCTGCATTTTCTTATCCTCCT...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTGGAGACTCCCCTCTaGTCCCAGGATTTACTTCAG +
Preference number: 4 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSLETPL*SQDLLQ
Trigger: CTGAAGTAAATCCTGGGAGCAGAGGGGAGTCTCCAG...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021142.8
ENSMUST00000108486.8
CDS-3UTR CCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCTCGGGGGTCTGGAATaGCATCTGTGTGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWLGGLE*HLCASS
Trigger: TGACGAAGCACACAGATGCCATTCCAGACCCCCGAG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCAGCTTGCGCTGCAATaGCGTCCGCTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLQLALQ*RPLRLH
Trigger: GTGGAGCCTGAGCGGACGCCATTGCAGCGCAAGCTG...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATTGTAGTGATGACTGCTaGGAGACCCTCGGGGATAGC +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYCSDDC*ETLGDS
Trigger: GCTATCCCCGAGGGTCTCCCAGCAGTCATCACTACA...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCAGAGGGCACAGATGGTaGCGAGCTCCACTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVRGHRW*RAPLAH
Trigger: ATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCT...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGTGCAGAGGGCACAGATaGTGGCGAGCTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQCRGHR*WRAPLA
Trigger: GGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCA...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTNILLP*TLGSAR
Trigger: TCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTT...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACATGTCCTCCTTCCTTaGGGGTGTGTCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QPNTEFICLQGRLRGLLLHVLLP*GCVPGG
Trigger: GCCACCAGGGACACACCCCCAAGGAAGGAGGACATG...TAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAAGATATCCAGATCTGGTaGGTTGAAGCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSFWARAVGRDRNGRREDIQIW*VEAKGC
Trigger: ACAGCCCTTGGCTTCAACCCACCAGATCTGGATATC...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCGCACAGATAAGGCCATaGTTGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEAAQIRP*LWGSVT
Trigger: AGTCACGCTTCCCCACAACCATGGCCTTATCTGTGC...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp AGTGTGGAGGCAGGGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGGCACAGATAAGGCCATaGTTGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: SVEAGVGTGQMPGCSQSEAQIRP*LWGSVT
Trigger: AGTCACGCTTCCCCACAACCATGGCCTTATCTGTGC...CTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGATGGTACCCGAAATGGTaGATTCATGCAAACGACAGG +
Preference number: 4 (lower is better)
Translates to: WTQLLGQSSREGQKWETGWYPKW*IHANDR
Trigger: CCTGTCGTTTGCATGAATTCACCATTTCGGGTACCA...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGCCCACTCGGACTaGGCTACAGCGCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQAAHSD*ATALNY
Trigger: GTAATTGAGCGCTGTAGCTCAGTCCGAGTGGGCAGC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACGCTGCCCACTCGGACTaGGCTACAGCGCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHAAHSD*ATALNY
Trigger: GTAATTGAGCGCTGTAGCTCAGTCCGAGTGGGCAGC...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCTGCCAGCAGCAGGATaGGCACCAAGAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQALPAAG*APRGPQ
Trigger: TTGAGGACCTCTTGGTGCGCATCCTGCTGCTGGCAG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCAAAGGAAACCAGAGCTaGCAGCAGCAGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVKGNQS*QQQDAH
Trigger: GTGCGCATCCTGCTGCTGGCAGCTCTGGTTTCCTTT...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCTTCAAGGCCTCAATTaGACTCTCTGCGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: VEAEPSGRSCLSLCSQLDLQGLN*TLCVAF
Trigger: GAACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAG...GTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCAAATTCATCCAGCTTaGGCTGCAATGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYQIHPA*AAMASA
Trigger: AGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTG...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAACCACCACGAACATCCTaGAGACAGACATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKPPRTS*RQTSDW
Trigger: CCAATCAGATGTCTGTCTGCAGGATGTTCGTGGTGG...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTACAGGTGCCTGCCTCTaGTTCAGCCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASTGACL*FSHHEH
Trigger: ATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGT...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATTCACAAACATCTTGCTaGCCTGGACCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYSQTSC*PGPWGQ
Trigger: CTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGA...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCCTTCACAAACATCTTaGTGCCCTGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYPSQTS*CPGPWG
Trigger: ACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGG...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGTGTGGAGGCAGGGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGATCTTGGCCAGGATATaGTCTCTGGAAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SVEAGVGTGQMPGCSQSEILARI*SLEVVL
Trigger: GAGCACCACTTCCAGAGAGCATATCCTGGCCAAGAT...CTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTTCGGTGGGTCTAACATaGCCACGCAGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGASVGLT*PRSPRR
Trigger: CCTTCGTGGGCTGCGTGGGCATGTTAGACCCACCGA...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCGACAAGCCTGGCGCTaGTGCTCTGGGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCRQAWR*CSGLRS
Trigger: TGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCCAAAGCACCGGGCAGTaGGACAAGCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALQSTGQ*DKPGAA
Trigger: AGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTG...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCCTTCTTCAGGGCTGGTaGATCATTCACCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVLLQGW*IIHPIA
Trigger: GGCGATGGGGTGAATGATGCACCAGCCCTGAAGAAG...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTGGCGATGCCGATCTCTaGCTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGAGDADL*LLQGWC
Trigger: GCACCAGCCCTGAAGAAGGCAGAGATCGGCATCGCC...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGTGTTGTAGATGGCCCTaGCCTCTTCTACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WERESLSRPAPCFLCSYLCCRWP*PLLLQP
Trigger: TGGCTGCAGTAGAAGAGGGCAGGGCCATCTACAACA...CAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATTGTTGTAGATGGCCCTaGCCTCTTCTACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYCCRWP*PLLLQP
Trigger: TGGCTGCAGTAGAAGAGGGCAGGGCCATCTACAACA...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGAGGAGGATAAGAAAATaGAGAGCCATGGACATGACC +
Preference number: 4 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMRRIRK*RAMDMT
Trigger: GGTCATGTCCATGGCTCTGCATTTTCTTATCCTCCT...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCACGGCTCGGGGGTCTaGAATGGCATCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHHGSGV*NGICVL
Trigger: AAGCACACAGATGCCATTCCAGACCCCCGAGCCGTG...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCATCACAGAGATGGCATaGGACAGCTGCCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSITEMA*DSCLPN
Trigger: ATTTGGGAGGCAGCTGTCCCATGCCATCTCTGTGAT...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGATCACAGAGATGGCATaGGACAGCTGCCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: VMPGDQAASDKVSHQAGWITEMA*DSCLPN
Trigger: ATTTGGGAGGCAGCTGTCCCATGCCATCTCTGTGAT...CCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAGCGCTCTGCTCCTGCCAAGCCATCCCTCCAAACTCTATTTCTCTCTGAGGCCATCACAGAGATGGCATaGGACAGCTGCCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: QRSAPAKPSLQTLFLSEAITEMA*DSCLPN
Trigger: ATTTGGGAGGCAGCTGTCCCATGCCATCTCTGTGAT...GGCCTCAGAGAGAAATAGAGTTTGGAGGGATGGCTTGGCAGGAGCAGAGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTTGTAGTGATGACTGCTaGGAGACCCTCGGGGATAGC +
Preference number: 4 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASCSDDC*ETLGDS
Trigger: GCTATCCCCGAGGGTCTCCCAGCAGTCATCACTACA...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGAGAGGGCACAGATGGTaGCGAGCTCCACTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQRGHRW*RAPLAH
Trigger: ATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCT...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCCCCAGTCCCGGATCTTaGCCAGGATATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFPSPGS*PGYALW
Trigger: CCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGG...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTCCCAGTCCCGGATCTTaGCCAGGATATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTPSPGS*PGYALW
Trigger: CCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGG...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGAAGCCAACCCGGTGTaGTATGGGGTCCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASEANPV*YGVLEV
Trigger: TACTTCCAGGACCCCATACCACACCGGGTTGGCTTC...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACACATCTGATTGGTGGTaGGCGTCCCCGTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHTSDWW*ASPSCQ
Trigger: CTGACAAGACGGGGACGCTCACCACCAATCAGATGT...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGTGGCATGCGCAGCAGTaGCTGGTTCTCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLWHAQQ*LVLRDA
Trigger: AGCGTCTCTGAGAACCAGTCACTGCTGCGCATGCCA...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGGGTCACCTGAAAAATaGGAGGCAGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQGSPEK*EAEVAP
Trigger: TGGTGCCACCTCTGCCTCTCATTTTTCAGGTGACCC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTGGGTCACCTGAAAAATaGGAGGCAGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTGSPEK*EAEVAP
Trigger: TGGTGCCACCTCTGCCTCTCATTTTTCAGGTGACCC...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCTGCCAGCAGCAGGATaGGCACCAAGAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLLPAAG*APRGPQ
Trigger: TTGAGGACCTCTTGGTGCGCATCCTGCTGCTGGCAG...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTAAAGGAAACCAGAGCTaGCAGCAGCAGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQAKGNQS*QQQDAH
Trigger: GTGCGCATCCTGCTGCTGGCAGCTCTGGTTTCCTTT...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCCTTGAAGTAGTAGACTaGACCACGGAGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVLEVVD*TTEPGS
Trigger: GGATCCTGGCTCCGTGGTGCAGTCTACTACTTCAAG...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTGCATGTAGTGATGACTaGTGGGAGACCCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTACSDD*WETLGD
Trigger: ATCCCCGAGGGTCTCCCAGCAGTCATCACTACATGC...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGGCATGTAGTGATGACTaGTGGGAGACCCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLACSDD*WETLGD
Trigger: ATCCCCGAGGGTCTCCCAGCAGTCATCACTACATGC...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCAATGGCATTCTTACGTaGCATACGTCTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GKGVIVQARPLLLMFLSANGILT*HTSCAQ
Trigger: CTGGGCACAAGACGTATGGCACGTAAGAATGCCATT...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGAATGGCATTCTTACGTaGCATACGTCTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WKELPLLVFTAGPRWFPQNGILT*HTSCAQ
Trigger: CTGGGCACAAGACGTATGGCACGTAAGAATGCCATT...CTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCACCACGAACATCCTaGAGACAGACATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: WERESLSRPAPCFLCSYLPPRTS*RQTSDW
Trigger: CCAATCAGATGTCTGTCTGCAGGATGTTCGTGGTGG...CAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGCATGCAAACGACAGGTaGCTGCCTCTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLHANDR*LPLLQP
Trigger: TGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATG...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWLQSSR*MSSFLG
Trigger: CCCAAGGAAGGAGGACATGCATCTAGATGACTGCAG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCGGCGATGCCGATCTCTaGCTTCTTCAGGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCGDADL*LLQGWC
Trigger: GCACCAGCCCTGAAGAAGGCAGAGATCGGCATCGCC...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCTCGGGGGTCTGGAATaGCATCTGTGTGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQALGGLE*HLCASS
Trigger: TGACGAAGCACACAGATGCCATTCCAGACCCCCGAG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTCCACAGCCGCCATCTaGCTCCGAATCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALSTAAI*LRILPS
Trigger: GCTGGGCAAGATTCGGAGCCAGATGGCGGCTGTGGA...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCGGGTCAGCAAAGTaGCCGATGTTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGAAGSAK*PMLMTH
Trigger: GTGGGTCATCAACATCGGCCACTTTGCTGACCCGGC...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGTCAGGGCGGTCTCTGTaGCCTCTCCTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQSGRSL*PLLPSH
Trigger: ATGAGAAGGTAGGAGAGGCCACAGAGACCGCCCTGA...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQPGYAL*KWCSGV
Trigger: CACCCCTGAGCACCACTTCCAGAGAGCATATCCTGG...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCATGTCCTCCTTCCTTaGGGGTGTGTCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCHVLLP*GCVPGG
Trigger: GCCACCAGGGACACACCCCCAAGGAAGGAGGACATG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGGATATCCAGATCTGGTaGGTTGAAGCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWDIQIW*VEAKGC
Trigger: ACAGCCCTTGGCTTCAACCCACCAGATCTGGATATC...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: WTQLLGQSSREGQKWETGIRPWL*GSVTQK
Trigger: TTTTTGAGTCACGCTTCCCCACAACCATGGCCTTAT...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGGGCCACACTGGAGATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GWEQDKCLDALSLRATLEIRPWL*GSVTQK
Trigger: TTTTTGAGTCACGCTTCCCCACAACCATGGCCTTAT...CTCCAGTGTGGCCCTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACAATGAGAGGCAGAGGTaGCACCAGGAGGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: VEAEPSGRSCLSLCSQLDNERQR*HQEDKK
Trigger: TTTCTTATCCTCCTGGTGCCACCTCTGCCTCTCATT...GTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACAATGAGAGGCAGAGGTaGCACCAGGAGGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADNERQR*HQEDKK
Trigger: TTTCTTATCCTCCTGGTGCCACCTCTGCCTCTCATT...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATAATGAGAGGCAGAGGTaGCACCAGGAGGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDNERQR*HQEDKK
Trigger: TTTCTTATCCTCCTGGTGCCACCTCTGCCTCTCATT...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGGCTGCTGCTCTGGGCTaGGGTCATCAAACTCACGGC +
Preference number: 4 (lower is better)
Translates to: PQTHTFISPSETISKWAQAAALG*GHQTHG
Trigger: GCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGC...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTAGGCCCAGAATTGCTGTaGGGAAGATGCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: QPNTEFICLQGRLRGLLLGPELL*GRCRQP
Trigger: AGGTTGTCTGCATCTTCCTCACAGCAATTCTGGGCC...TAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCGGCCCAGAATTGCTGTaGGGAAGATGCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFGPELL*GRCRQP
Trigger: AGGTTGTCTGCATCTTCCTCACAGCAATTCTGGGCC...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTGGCATGCGCAGCAGTaGCTGGTTCTCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCWHAQQ*LVLRDA
Trigger: AGCGTCTCTGAGAACCAGTCACTGCTGCGCATGCCA...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCCCTCATCGAGCAGGATaGCAGGCAGAGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFPHRAG*QAETSE
Trigger: TTCAGATGTCTCTGCCTGTCATCCTGCTCGATGAGG...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCAAATTCATCCAGCTTaGGCTGCAATGGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQAQIHPA*AAMASA
Trigger: AGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATAATGGCATTCTTACGTaGCATACGTCTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYNGILT*HTSCAQ
Trigger: CTGGGCACAAGACGTATGGCACGTAAGAATGCCATT...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGACAGGTGCCTGCCTCTaGTTCAGCCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLTGACL*FSHHEH
Trigger: ATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGT...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGTCACAAACATCTTGCTaGCCTGGACCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLSQTSC*PGPWGQ
Trigger: CTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGA...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGCCTTCACAAACATCTTaGTGCCCTGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQPSQTS*CPGPWG
Trigger: ACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGG...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCAAGCCTGGCGCTGCTaGTCTGGGCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PQTHTFISPSETISKWAQQAWRC*SGLRSS
Trigger: TGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTG...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATAAACCTTGCAGTCAATaGCAGCAAACAGTGGATTGT +
Preference number: 4 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYKPCSQ*QQTVDC
Trigger: ACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTT...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCAAACCTTGCAGTCAATaGCAGCAAACAGTGGATTGT +
Preference number: 4 (lower is better)
Translates to: HSWERESLSRPAPCFLCSKPCSQ*QQTVDC
Trigger: ACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTT...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACAGGAGGATAAGAAAATaGAGAGCCATGGACATGACC +
Preference number: 4 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADRRIRK*RAMDMT
Trigger: GGTCATGTCCATGGCTCTGCATTTTCTTATCCTCCT...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCTCGGGGGTCTGGAATaGCATCTGTGTGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLLGGLE*HLCASS
Trigger: TGACGAAGCACACAGATGCCATTCCAGACCCCCGAG...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCACGGCTCGGGGGTCTaGAATGGCATCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCHGSGV*NGICVL
Trigger: AAGCACACAGATGCCATTCCAGACCCCCGAGCCGTG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGATGCCTGATGCAATATTaGTGCCAGAAAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRCLMQY*CQKIAC
Trigger: ACATGCTATTTTCTGGCACCAATATTGCATCAGGCA...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGANILLP*TLGSAR
Trigger: TCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTT...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: PLFLHQKQSASGHSALLLNILLP*TLGSAR
Trigger: TCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTT...CAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADIRPWL*GSVTQK
Trigger: TTTTTGAGTCACGCTTCCCCACAACCATGGCCTTAT...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCACAGATAAGGCCATaGTTGTGGGGAAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQAQIRP*LWGSVT
Trigger: AGTCACGCTTCCCCACAACCATGGCCTTATCTGTGC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCACATCTGATTGGTGGTaGGCGTCCCCGTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALTSDWW*ASPSCQ
Trigger: CTGACAAGACGGGGACGCTCACCACCAATCAGATGT...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACATGGTACCCGAAATGGTaGATTCATGCAAACGACAGG +
Preference number: 4 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTWYPKW*IHANDR
Trigger: CCTGTCGTTTGCATGAATTCACCATTTCGGGTACCA...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCGGGTCACCTGAAAAATaGGAGGCAGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALGSPEK*EAEVAP
Trigger: TGGTGCCACCTCTGCCTCTCATTTTTCAGGTGACCC...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCACTCAGTGGGGTCACCTaGAAAATGAGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LFLHQKQSASGHSALLLPLSGVT*KMRGRG
Trigger: ACCTCTGCCTCTCATTTTTCAGGTGACCCCACTGAG...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCACCTCATCGAGCAGGATaGCAGGCAGAGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: LFLHQKQSASGHSALLLPPHRAG*QAETSE
Trigger: TTCAGATGTCTCTGCCTGTCATCCTGCTCGATGAGG...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTCCTCATCGAGCAGGATaGCAGGCAGAGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGAPHRAG*QAETSE
Trigger: TTCAGATGTCTCTGCCTGTCATCCTGCTCGATGAGG...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCAAAGGAAACCAGAGCTaGCAGCAGCAGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALKGNQS*QQQDAH
Trigger: GTGCGCATCCTGCTGCTGGCAGCTCTGGTTTCCTTT...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACAAATGGCATTCTTACGTaGCATACGTCTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTNGILT*HTSCAQ
Trigger: CTGGGCACAAGACGTATGGCACGTAAGAATGCCATT...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCATGCAAACGACAGGTaGCTGCCTCTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCHANDR*LPLLQP
Trigger: TGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTTCACAAACATCTTGCTaGCCTGGACCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGASQTSC*PGPWGQ
Trigger: CTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGA...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCACCTTCACAAACATCTTaGTGCCCTGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LFLHQKQSASGHSALLLPPSQTS*CPGPWG
Trigger: ACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGG...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACATCTTGGCCAGGATATaGTCTCTGGAAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHILARI*SLEVVL
Trigger: GAGCACCACTTCCAGAGAGCATATCCTGGCCAAGAT...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQALQSSR*MSSFLG
Trigger: CCCAAGGAAGGAGGACATGCATCTAGATGACTGCAG...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCAAACCTTGCAGTCAATaGCAGCAAACAGTGGATTGT +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPKPCSQ*QQTVDC
Trigger: ACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTT...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTAAACCTTGCAGTCAATaGCAGCAAACAGTGGATTGT +
Preference number: 4 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLKPCSQ*QQTVDC
Trigger: ACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTT...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCPGYAL*KWCSGV
Trigger: CACCCCTGAGCACCACTTCCAGAGAGCATATCCTGG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp CAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGATATCCAGATCTGGTaGGTTGAAGCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QRVMPGDQAASDKVSHQADIQIW*VEAKGC
Trigger: ACAGCCCTTGGCTTCAACCCACCAGATCTGGATATC...AGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SWERESLSRPAPCFLCSYIRPWL*GSVTQK
Trigger: TTTTTGAGTCACGCTTCCCCACAACCATGGCCTTAT...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCTGGTACCCGAAATGGTaGATTCATGCAAACGACAGG +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFWYPKW*IHANDR
Trigger: CCTGTCGTTTGCATGAATTCACCATTTCGGGTACCA...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCGGCCCAGAATTGCTGTaGGGAAGATGCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCGPELL*GRCRQP
Trigger: AGGTTGTCTGCATCTTCCTCACAGCAATTCTGGGCC...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACAATGGCATTCTTACGTaGCATACGTCTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHNGILT*HTSCAQ
Trigger: CTGGGCACAAGACGTATGGCACGTAAGAATGCCATT...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTATCTTGGCCAGGATATaGTCTCTGGAAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGAILARI*SLEVVL
Trigger: GAGCACCACTTCCAGAGAGCATATCCTGGCCAAGAT...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCCTGGAGACTCCCCTCTaGTCCCAGGATTTACTTCAG +
Preference number: 4 (lower is better)
Translates to: THLYFSIRNNQQVGTALCLETPL*SQDLLQ
Trigger: CTGAAGTAAATCCTGGGAGCAGAGGGGAGTCTCCAG...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021142.8
ENSMUST00000108486.8
CDS-3UTR CCA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTGCCTGATGCAATATTaGTGCCAGAAAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPCLMQY*CQKIAC
Trigger: ACATGCTATTTTCTGGCACCAATATTGCATCAGGCA...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TGTTCACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACTGCCTGATGCAATATTaGTGCCAGAAAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: CSQLDPDGSLRLLLPIADCLMQY*CQKIAC
Trigger: ACATGCTATTTTCTGGCACCAATATTGCATCAGGCA...GTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCATGGTACCCGAAATGGTaGATTCATGCAAACGACAGG +
Preference number: 4 (lower is better)
Translates to: LFLHQKQSASGHSALLLPWYPKW*IHANDR
Trigger: CCTGTCGTTTGCATGAATTCACCATTTCGGGTACCA...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTAATGAGAGGCAGAGGTaGCACCAGGAGGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGANERQR*HQEDKK
Trigger: TTTCTTATCCTCCTGGTGCCACCTCTGCCTCTCATT...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR TCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGGTACCCGAAATGGTaGATTCATGCAAACGACAGG +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALWYPKW*IHANDR
Trigger: CCTGTCGTTTGCATGAATTCACCATTTCGGGTACCA...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGATCTTGGCCAGGATATaGTCTCTGGAAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PQTHTFISPSETISKWAQILARI*SLEVVL
Trigger: GAGCACCACTTCCAGAGAGCATATCCTGGCCAAGAT...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQTHTFISPSETISKWAQLQSSR*MSSFLG
Trigger: CCCAAGGAAGGAGGACATGCATCTAGATGACTGCAG...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp CCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTTACTGAAACCTTGCAGTCAATaGCAGCAAACAGTGGATTGT +
Preference number: 4 (lower is better)
Translates to: PNTEFICLQGRLRGLLLLKPCSQ*QQTVDC
Trigger: ACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTT...CAGTAACAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR GCA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCAAGGAGGATAAGAAAATaGAGAGCCATGGACATGACC +
Preference number: 4 (lower is better)
Translates to: LFLHQKQSASGHSALLLPRRIRK*RAMDMT
Trigger: GGTCATGTCCATGGCTCTGCATTTTCTTATCCTCCT...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTCTGCCTGATGCAATATTaGTGCCAGAAAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: DAFFQWGGRGGSPLWSHFCLMQY*CQKIAC
Trigger: ACATGCTATTTTCTGGCACCAATATTGCATCAGGCA...GAAGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CCA 90 bp GACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: DTHLYFSIRNNQQVGTALIRPWL*GSVTQK
Trigger: TTTTTGAGTCACGCTTCCCCACAACCATGGCCTTAT...GAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp GTGGCGAGCTCCACTAGCCCATCAAACTGCCCACAGCGCACAGGCTaGTCCCCTTGCCTCACTTCGCCCTCTGGGGTGTACGTGGTACCC +
Preference number: 5 (lower is better)
Translates to: VASSTSPSNCPQRTG*SPCLTSPSGVYVVP
Trigger: GGGTACCACGTACACCCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTGCGCTGTGGGCAGTTTGATGGGCTAGTGGAGCTCGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGGAAAGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCCACAGGCTGCTCCCCTaGCCTCACTTCGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GKGCRAGVGNARWLCNQLHRLLP*PHFALW
Trigger: CCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTG...GAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 90 bp CAGAGCCTGAGCCCCAGTCCCGGATCTTGGCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTGCTGTTCGGCTGCCCACTCGGACTG +
Preference number: 5 (lower is better)
Translates to: QSLSPSPGSWPGYAL*KWCSGVLFGCPLGL
Trigger: CAGTCCGAGTGGGCAGCCGAACAGCACCCCTGAGCACCACTTCCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGGGCTCAGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTACACAGGCTGCTCCCCTaGCCTCACTTCGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AELGWGMRGGSAISSGFLHRLLP*PHFALW
Trigger: CCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTG...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS TCA 90 bp CAAAGCACCGGGCAGTGCGACAAGCCTGGCGCTGCTGCTCTGGGCTaGGGTCATCAAACTCACGGCCCGTGTAGGCCTTGCCCAACACAT +
Preference number: 5 (lower is better)
Translates to: QSTGQCDKPGAAALG*GHQTHGPCRPCPTH
Trigger: ATGTGTTGGGCAAGGCCTACACGGGCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTGTGAGCGTCCCCGTCTaGTCAGAGCAGATGACCGAG +
Preference number: 5 (lower is better)
Translates to: RLQSWGGECAVALQSALAVSVPV*SEQMTE
Trigger: CTCGGTCATCTGCTCTGACAAGACGGGGACGCTCAC...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATCACAGGCTGCTCCCCTaGCCTCACTTCGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYHRLLP*PHFALW
Trigger: CCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTG...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCTGCTTGATGACTGAGTaGCAGGCGCCAGCACGCTCC +
Preference number: 5 (lower is better)
Translates to: AEVSQPAQAHSWERESLSCLMTE*QAPARS
Trigger: GGAGCGTGCTGGCGCCTGCAACTCAGTCATCAAGCA...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCGCATGTCCTCCTTCCTaGGGGGTGTGTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: FWARAVGRDRNGRREPGTACPPS*GVCPWW
Trigger: CCACCAGGGACACACCCCCAAGGAAGGAGGACATGC...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACAGCATGTCCTCCTTCCTaGGGGGTGTGTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AGWQEKLTWTQGCLESQTACPPS*GVCPWW
Trigger: CCACCAGGGACACACCCCCAAGGAAGGAGGACATGC...TGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp AGTGTGTCAGAGCCTGAGCCCCAGTCCCGGATCTTGGCCAGGATATaGTCTCTGGAAGTGGTGCTCAGGGGTGCTGTTCGGCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: SVSEPEPQSRILARI*SLEVVLRGAVRLPT
Trigger: AGTGGGCAGCCGAACAGCACCCCTGAGCACCACTTCCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGGGCTCAGGCTCTGACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTATACGTGCCATACGTCTaGTGCCCAGGGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: AELGWGMRGGSAISSGFLYVPYV*CPGPGM
Trigger: CATGCCTGGCCCTGGGCACAAGACGTATGGCACGTA...TAAGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGAGTGAGCGTCCCCGTCTaGTCAGAGCAGATGACCGAG +
Preference number: 5 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRVSVPV*SEQMTE
Trigger: CTCGGTCATCTGCTCTGACAAGACGGGGACGCTCAC...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTGTGAGCGTCCCCGTCTaGTCAGAGCAGATGACCGAG +
Preference number: 5 (lower is better)
Translates to: LQSWGGECAVALQSALASVSVPV*SEQMTE
Trigger: CTCGGTCATCTGCTCTGACAAGACGGGGACGCTCAC...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTCACAGGCTGCTCCCCTaGCCTCACTTCGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLHRLLP*PHFALW
Trigger: CCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTG...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCTGCTTGATGACTGAGTaGCAGGCGCCAGCACGCTCC +
Preference number: 5 (lower is better)
Translates to: FWARAVGRDRNGRREPGTCLMTE*QAPARS
Trigger: GGAGCGTGCTGGCGCCTGCAACTCAGTCATCAAGCA...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCATCTCTGCTGCTGACTaGGCCACAGCAGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: AEVSQPAQAHSWERESLSISAAD*ATAVPE
Trigger: CTCAGGCACTGCTGTGGCCAAGTCAGCAGCAGAGAT...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTCCAGATCTGGTGGGTaGAAGCCAAGGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMSRSGG*KPRAVA
Trigger: GGCCACAGCCCTTGGCTTCAACCCACCAGATCTGGA...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTTCCAGATCTGGTGGGTaGAAGCCAAGGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LQSWGGECAVALQSALASSRSGG*KPRAVA
Trigger: GGCCACAGCCCTTGGCTTCAACCCACCAGATCTGGA...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTCAGGCTCCACGAAGGCCGTaGTGGTCTCCTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: WKELPLLVFTAGPRWFPQAPRRP*WSPHPP
Trigger: AGGAGGGTGAGGAGACCACAACGGCCTTCGTGGAGC...CTGAGGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAGCTCCACGAAGGCCGTaGTGGTCTCCTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKAPRRP*WSPHPP
Trigger: AGGAGGGTGAGGAGACCACAACGGCCTTCGTGGAGC...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGGCTCCACGAAGGCCGTaGTGGTCTCCTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: VMPGDQAASDKVSHQAGWAPRRP*WSPHPP
Trigger: AGGAGGGTGAGGAGACCACAACGGCCTTCGTGGAGC...CCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGAATAGGGCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCGAAGTGTGGTGGACTaGATCTCGATGAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: GIGLRSASQRRLTPGKGSRSVVD*ISMRRR
Trigger: CCTCCGTCTCATCGAGATCAAGTCCACCACACTTCG...ACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGCCCTATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGATCTGGCTCCGAATCTaGCCCAGCTCTGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGIWLRI*PSSVCR
Trigger: CCTGCAGACAGAGCTGGGCAAGATTCGGAGCCAGAT...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAATCTGGCTCCGAATCTaGCCCAGCTCTGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPIWLRI*PSSVCR
Trigger: CCTGCAGACAGAGCTGGGCAAGATTCGGAGCCAGAT...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGATCTGGCTCCGAATCTaGCCCAGCTCTGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGDQAASDKVSHQAGWQEIWLRI*PSSVCR
Trigger: CCTGCAGACAGAGCTGGGCAAGATTCGGAGCCAGAT...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTACGTGCCATACGTCTaGTGCCCAGGGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: HSWERESLSRPAPCFLCSYVPYV*CPGPGM
Trigger: CATGCCTGGCCCTGGGCACAAGACGTATGGCACGTA...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCACAGGCTGCTCCCCTaGCCTCACTTCGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SWERESLSRPAPCFLCSYHRLLP*PHFALW
Trigger: CCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTG...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCTCCAGCGCAGAATCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: AEVSQPAQAHSWERESLSSSAES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGA...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGATGCTTGATGACTGAGTaGCAGGCGCCAGCACGCTCC +
Preference number: 5 (lower is better)
Translates to: WTQLLGQSSREGQKWETGCLMTE*QAPARS
Trigger: GGAGCGTGCTGGCGCCTGCAACTCAGTCATCAAGCA...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGCCCTTCACAAACATCTaGCTGCCCTGGACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRPFTNI*LPWTLG
Trigger: CCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGG...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp ACAGCTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCCCCTTCACAAACATCTaGCTGCCCTGGACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TAGPRWFPQTPPTHSGPGPFTNI*LPWTLG
Trigger: CCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGG...GCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTGCATGTCCTCCTTCCTaGGGGGTGTGTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPACPPS*GVCPWW
Trigger: CCACCAGGGACACACCCCCAAGGAAGGAGGACATGC...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTGCATGTCCTCCTTCCTaGGGGGTGTGTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLACPPS*GVCPWW
Trigger: CCACCAGGGACACACCCCCAAGGAAGGAGGACATGC...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCATCTCTGCTGCTGACTaGGCCACAGCAGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: FWARAVGRDRNGRREPGTISAAD*ATAVPE
Trigger: CTCAGGCACTGCTGTGGCCAAGTCAGCAGCAGAGAT...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGATCCAGATCTGGTGGGTaGAAGCCAAGGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: WTQLLGQSSREGQKWETGSRSGG*KPRAVA
Trigger: GGCCACAGCCCTTGGCTTCAACCCACCAGATCTGGA...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATGCTCCACGAAGGCCGTaGTGGTCTCCTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: SWERESLSRPAPCFLCSYAPRRP*WSPHPP
Trigger: AGGAGGGTGAGGAGACCACAACGGCCTTCGTGGAGC...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAACCTGGGACCCGAAGTGTGGTGGACTaGATCTCGATGAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: FWARAVGRDRNGRREPGTRSVVD*ISMRRR
Trigger: CCTCCGTCTCATCGAGATCAAGTCCACCACACTTCG...GGTCCCAGGTTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAATCTGGCTCCGAATCTaGCCCAGCTCTGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WTQLLGQSSREGQKWETGIWLRI*PSSVCR
Trigger: CCTGCAGACAGAGCTGGGCAAGATTCGGAGCCAGAT...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGGCAAAGTGGCCGATGTaGATGACCCACACAGCCACA +
Preference number: 5 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGAKWPM*MTHTAT
Trigger: TGTGGCTGTGTGGGTCATCAACATCGGCCACTTTGC...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTTTGTACGTGCCATACGTCTaGTGCCCAGGGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: GQPNTEFICLQGRLRGLLYVPYV*CPGPGM
Trigger: CATGCCTGGCCCTGGGCACAAGACGTATGGCACGTA...CAAAAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GTGGAAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACGTGAGCGTCCCCGTCTaGTCAGAGCAGATGACCGAG +
Preference number: 5 (lower is better)
Translates to: VEAEPSGRSCLSLCSQLDVSVPV*SEQMTE
Trigger: CTCGGTCATCTGCTCTGACAAGACGGGGACGCTCAC...GTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCGTGAGCGTCCCCGTCTaGTCAGAGCAGATGACCGAG +
Preference number: 5 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPVSVPV*SEQMTE
Trigger: CTCGGTCATCTGCTCTGACAAGACGGGGACGCTCAC...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGTGCTTGATGACTGAGTaGCAGGCGCCAGCACGCTCC +
Preference number: 5 (lower is better)
Translates to: KLSQVEGAASPCVHSWTQCLMTE*QAPARS
Trigger: GGAGCGTGCTGGCGCCTGCAACTCAGTCATCAAGCA...CTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp ACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTTGCTTGATGACTGAGTaGCAGGCGCCAGCACGCTCC +
Preference number: 5 (lower is better)
Translates to: TPGKGSHCPGPPPASYVPCLMTE*QAPARS
Trigger: GGAGCGTGCTGGCGCCTGCAACTCAGTCATCAAGCA...AGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATCCCTTCACAAACATCTaGCTGCCCTGGACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RLTPGKGSHCPGPPPASYPFTNI*LPWTLG
Trigger: CCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGG...ATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGAGGTCAGCCAGCCAGCGCAGGCTCACTCCTGGGAAAGGGAGTCATTGTCCCAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAA +
Preference number: 5 (lower is better)
Translates to: AEVSQPAQAHSWERESLSQIRPW*WGSVTQ
Trigger: TTGAGTCACGCTTCCCCACAACCATGGCCTTATCTG...GGACAATGACTCCCTTTCCCAGGAGTGAGCCTGCGCTGGCTGGCTGACCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCCCTCCTGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGTTCCTGGACAGATACTaGAGGGCCTCATCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SPPGLSFWARAVGRDRNGFLDRY*RASSSR
Trigger: CCTGCTCGATGAGGCCCTCAAGTATCTGTCCAGGAA...CCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCAGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGTTCCTGGACAGATACTaGAGGGCCTCATCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PGDQAASDKVSHQAGWQEFLDRY*RASSSR
Trigger: CCTGCTCGATGAGGCCCTCAAGTATCTGTCCAGGAA...CTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp CAAGCAGCCACCTCGTACTGTACAAACCGGCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGGGGTGTGTCCCTGGTGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: QAATSYCTNRLQSSR*MSSFLGGVSLVAKA
Trigger: AGCCTTGGCCACCAGGGACACACCCCCAAGGAAGGAGGACATGCATCTAGATGACTGCAGCCGGTTTGTACAGTACGAGGTGGCTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108484.8
ENSMUST00000108486.8
CDS GCA 90 bp GAAGCCAACCCGGTGTGGTATGGGGTCCTGGAAGTAGTCGGCAGCTaGCTACTCCGAGCCTGCATAAATGTCCCGAGAACACCATCCATG +
Preference number: 5 (lower is better)
Translates to: EANPVWYGVLEVVGS*LLRACINVPRTPSM
Trigger: CATGGATGGTGTTCTCGGGACATTTATGCAGGCTCGGAGTAGGCAGCTGCCGACTACTTCCAGGACCCCATACCACACCGGGTTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCATTGCACTCTCTGCGTaGCGTTCCTGCCACACTCCC +
Preference number: 5 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPIALSA*RSCHTP
Trigger: GGGAGTGTGGCAGGAACGCAACGCAGAGAGTGCAAT...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTATTGCACTCTCTGCGTaGCGTTCCTGCCACACTCCC +
Preference number: 5 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVIALSA*RSCHTP
Trigger: GGGAGTGTGGCAGGAACGCAACGCAGAGAGTGCAAT...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGTGTGGAGGCAGGGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGATTGCACTCTCTGCGTaGCGTTCCTGCCACACTCCC +
Preference number: 5 (lower is better)
Translates to: SVEAGVGTGQMPGCSQSEIALSA*RSCHTP
Trigger: GGGAGTGTGGCAGGAACGCAACGCAGAGAGTGCAAT...CTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTCTCCTTCAAGGCCTCAATaGCACTCTCTGCGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: LQSWGGECAVALQSALASPSRPQ*HSLRCV
Trigger: AACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAGG...AGAAGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCCGAAGTGTGGTGGACTaGATCTCGATGAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: HSWERESLSRPAPCFLCSRSVVD*ISMRRR
Trigger: CCTCCGTCTCATCGAGATCAAGTCCACCACACTTCG...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGAAGCAAAGTGGCCGATGTaGATGACCCACACAGCCACA +
Preference number: 5 (lower is better)
Translates to: GLSFWARAVGRDRNGRREAKWPM*MTHTAT
Trigger: TGTGGCTGTGTGGGTCATCAACATCGGCCACTTTGC...TTCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGATCCAGCGCAGAATCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: WTQLLGQSSREGQKWETGSSAES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGA...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTCCCTTCACAAACATCTaGCTGCCCTGGACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLPFTNI*LPWTLG
Trigger: CCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGG...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCCTTCACAAACATCTaGCTGCCCTGGACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSPFTNI*LPWTLG
Trigger: CCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGG...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGACAGCTGTCCCTTTGTaGTCCCCTGTGATCATGACC +
Preference number: 5 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMTAVPL*SPVIMT
Trigger: GGTCATGATCACAGGGGACAACAAAGGGACAGCTGT...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS TCA 90 bp CTTGCCTCACTTCGCCCTCTGGGGTGTACGTGGTACCCGAAATGGTaGATTCATGCAAACGACAGGTGCCTGCCTCTGCTTCAGCCACCA +
Preference number: 5 (lower is better)
Translates to: LASLRPLGCTWYPKW*IHANDRCLPLLQPP
Trigger: TGGTGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATGAATTCACCATTTCGGGTACCACGTACACCCCAGAGGGCGAAGTGAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS TCA 90 bp TCTGGAAGTGGTGCTCAGGGGTGCTGTTCGGCTGCCCACTCGGACTaGGCTACAGCGCTCAATTACACTCTCAGGAGCTCCCTTCACAAA +
Preference number: 5 (lower is better)
Translates to: SGSGAQGCCSAAHSD*ATALNYTLRSSLHK
Trigger: TTTGTGAAGGGAGCTCCTGAGAGTGTAATTGAGCGCTGTAGCTCAGTCCGAGTGGGCAGCCGAACAGCACCCCTGAGCACCACTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp GTCAGGTCTGTCTCGTACTGTACAAACCGGCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGGGGTGTGTCCCTGGTGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: VRSVSYCTNRLQSSR*MSSFLGGVSLVAKA
Trigger: AGCCTTGGCCACCAGGGACACACCCCCAAGGAAGGAGGACATGCATCTAGATGACTGCAGCCGGTTTGTACAGTACGAGACAGACCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTGCTCCACGAAGGCCGTaGTGGTCTCCTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTAPRRP*WSPHPP
Trigger: AGGAGGGTGAGGAGACCACAACGGCCTTCGTGGAGC...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATATTGCACTCTCTGCGTaGCGTTCCTGCCACACTCCC +
Preference number: 5 (lower is better)
Translates to: SWERESLSRPAPCFLCSYIALSA*RSCHTP
Trigger: GGGAGTGTGGCAGGAACGCAACGCAGAGAGTGCAAT...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AAGCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGGCCACACCCAGGGCTTaGCCTGATGCAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: KLSQVEGAASPCVHSWTQATPRA*PDAILV
Trigger: CACCAATATTGCATCAGGCAAAGCCCTGGGTGTGGC...CTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGGGAGGAGATGCAGGAGAGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGCAAAGTGGCCGATGTaGATGACCCACACAGCCACA +
Preference number: 5 (lower is better)
Translates to: GEEMQESGQPNTEFICLQAKWPM*MTHTAT
Trigger: TGTGGCTGTGTGGGTCATCAACATCGGCCACTTTGC...TTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACTCTCCTGCATCTCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAGCAAAGTGGCCGATGTaGATGACCCACACAGCCACA +
Preference number: 5 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKAKWPM*MTHTAT
Trigger: TGTGGCTGTGTGGGTCATCAACATCGGCCACTTTGC...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTTCCAGCGCAGAATCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVSSAES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGA...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACGCATGTCCTCCTTCCTaGGGGGTGTGTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHACPPS*GVCPWW
Trigger: CCACCAGGGACACACCCCCAAGGAAGGAGGACATGC...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCACAGCTGTCCCTTTGTaGTCCCCTGTGATCATGACC +
Preference number: 5 (lower is better)
Translates to: HSWERESLSRPAPCFLCSTAVPL*SPVIMT
Trigger: GGTCATGATCACAGGGGACAACAAAGGGACAGCTGT...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTTCCAGATCTGGTGGGTaGAAGCCAAGGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASSRSGG*KPRAVA
Trigger: GGCCACAGCCCTTGGCTTCAACCCACCAGATCTGGA...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGCTGATAGAAGGTGACTaGAGGTCCCTCGGTGTCATA +
Preference number: 5 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRLIEGD*RSLGVI
Trigger: TATGACACCGAGGGACCTCAAGTCACCTTCTATCAG...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp ATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGACCAGCAAACAGTGGATaGTCTTCAGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: ITPGWVAGEADMDPGMPGPANSG*SSEHFR
Trigger: CCTGAAGTGCTCTGAAGACAATCCACTGTTTGCTGG...TCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGACAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAA +
Preference number: 5 (lower is better)
Translates to: WTQLLGQSSREGQKWETGQIRPW*WGSVTQ
Trigger: TTGAGTCACGCTTCCCCACAACCATGGCCTTATCTG...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCAGATTCTCAGAGACGCTGTaGAGGGCGTTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: GPRWFPQTPPTHSGPGSRFSETL*RALHIS
Trigger: TGAAATGTGCAACGCCCTCAACAGCGTCTCTGAGAA...TCTGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CTGGACCCAGATGGTTCCCTCAGACTCCTCCTACCCATAGCGGACCAGGCTCCATTCTCAGAGACGCTGTaGAGGGCGTTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: LDPDGSLRLLLPIADQAPFSETL*RALHIS
Trigger: TGAAATGTGCAACGCCCTCAACAGCGTCTCTGAGAA...TGGAGCCTGGTCCGCTATGGGTAGGAGGAGTCTGAGGGAACCATCTGGGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCTTCCTGGACAGATACTaGAGGGCCTCATCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSFLDRY*RASSSR
Trigger: CCTGCTCGATGAGGCCCTCAAGTATCTGTCCAGGAA...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCTTCCTGGACAGATACTaGAGGGCCTCATCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GKGVIVQARPLLLMFLSAFLDRY*RASSSR
Trigger: CCTGCTCGATGAGGCCCTCAAGTATCTGTCCAGGAA...GGCAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp ACTTCGCCCTCTGGGGTGTACGTGGTACCCGAAATGGTGAATTCATaGAAACGACAGGTGCCTGCCTCTGCTTCAGCCACCACGAACATC +
Preference number: 5 (lower is better)
Translates to: TSPSGVYVVPEMVNS*KRQVPASASATTNI
Trigger: GATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATGAATTCACCATTTCGGGTACCACGTACACCCCAGAGGGCGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCTTCAAGGCCTCAATaGCACTCTCTGCGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSPSRPQ*HSLRCV
Trigger: AACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAGG...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAACCTTCAAGGCCTCAATaGCACTCTCTGCGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: DMDPGMPGVSDTRGIDGKPSRPQ*HSLRCV
Trigger: AACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAGG...TTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCGAAGTGTGGTGGACTaGATCTCGATGAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: WERESLSRPAPCFLCSYLRSVVD*ISMRRR
Trigger: CCTCCGTCTCATCGAGATCAAGTCCACCACACTTCG...CAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATGCCACACCCAGGGCTTaGCCTGATGCAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: SWERESLSRPAPCFLCSYATPRA*PDAILV
Trigger: CACCAATATTGCATCAGGCAAAGCCCTGGGTGTGGC...ATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAGGGATGCCTGGAGTCTCAGACACCAGGGGCATAGACGGTAAAATTAGGACAATCTGGCTCCGAATCTaGCCCAGCTCTGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGMPGVSDTRGIDGKIRTIWLRI*PSSVCR
Trigger: CCTGCAGACAGAGCTGGGCAAGATTCGGAGCCAGAT...TGTCCTAATTTTACCGTCTATGCCCCTGGTGTCTGAGACTCCAGGCATCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTTACGTGCCATACGTCTaGTGCCCAGGGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTYVPYV*CPGPGM
Trigger: CATGCCTGGCCCTGGGCACAAGACGTATGGCACGTA...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATACAGCTGTCCCTTTGTaGTCCCCTGTGATCATGACC +
Preference number: 5 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDTAVPL*SPVIMT
Trigger: GGTCATGATCACAGGGGACAACAAAGGGACAGCTGT...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGTGGGCAGCCAAACACGGAGTTCATCTGTCTGCAAGGTAGGCTGAGGGGGCTTACAGCTGTCCCTTTGTaGTCCCCTGTGATCATGACC +
Preference number: 5 (lower is better)
Translates to: SGQPNTEFICLQGRLRGLTAVPL*SPVIMT
Trigger: GGTCATGATCACAGGGGACAACAAAGGGACAGCTGT...AAGCCCCCTCAGCCTACCTTGCAGACAGATGAACTCCGTGTTTGGCTGCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTATCTCTGCTGCTGACTaGGCCACAGCAGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASISAAD*ATAVPE
Trigger: CTCAGGCACTGCTGTGGCCAAGTCAGCAGCAGAGAT...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAA +
Preference number: 5 (lower is better)
Translates to: PSGRSCLSLCSQLDPDGSQIRPW*WGSVTQ
Trigger: TTGAGTCACGCTTCCCCACAACCATGGCCTTATCTG...GGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTTCTCAGAGACGCTGTaGAGGGCGTTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: HSWERESLSRPAPCFLCSFSETL*RALHIS
Trigger: TGAAATGTGCAACGCCCTCAACAGCGTCTCTGAGAA...GGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCTATCTGCCTTCAAGGCCTCAATaGCACTCTCTGCGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: WERESLSRPAPCFLCSYLPSRPQ*HSLRCV
Trigger: AACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAGG...CAGATAGGAACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTCGAAGTGTGGTGGACTaGATCTCGATGAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASRSVVD*ISMRRR
Trigger: CCTCCGTCTCATCGAGATCAAGTCCACCACACTTCG...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGGTTGCAGAGCTGGGGTGGGGAATGCGCGGTGGCTCTGCAATCAGCTCTGGCTTTGCCTGATGCAATATaGGTGCCAGAAAATAGCATG +
Preference number: 5 (lower is better)
Translates to: RLQSWGGECAVALQSALALPDAI*VPENSM
Trigger: CATGCTATTTTCTGGCACCAATATTGCATCAGGCAA...AGCCAGAGCTGATTGCAGAGCCACCGCGCATTCCCCACCCCAGCTCTGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGATCTCTGCTGCTGACTaGGCCACAGCAGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQISAAD*ATAVPE
Trigger: CTCAGGCACTGCTGTGGCCAAGTCAGCAGCAGAGAT...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCCCAGCAAACAGTGGATaGTCTTCAGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPPANSG*SSEHFR
Trigger: CCTGAAGTGCTCTGAAGACAATCCACTGTTTGCTGG...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp AGTGTGGAGGCAGGGGTGGGAACAGGACAAATGCCTGGATGCTCTCAGTCTGAGCCAGCAAACAGTGGATaGTCTTCAGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: SVEAGVGTGQMPGCSQSEPANSG*SSEHFR
Trigger: CCTGAAGTGCTCTGAAGACAATCCACTGTTTGCTGG...CTCAGACTGAGAGCATCCAGGCATTTGTCCTGTTCCCACCCCTGCCTCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTCCAGCAAACAGTGGATaGTCTTCAGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: LTPGKGSHCPGPPPASYVPANSG*SSEHFR
Trigger: CCTGAAGTGCTCTGAAGACAATCCACTGTTTGCTGG...AACATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGACCCAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAA +
Preference number: 5 (lower is better)
Translates to: ASDKVSHQAGWQEKLTWTQIRPW*WGSVTQ
Trigger: TTGAGTCACGCTTCCCCACAACCATGGCCTTATCTG...GGTCCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAA +
Preference number: 5 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWQIRPW*WGSVTQ
Trigger: TTGAGTCACGCTTCCCCACAACCATGGCCTTATCTG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATGGTTCCCTTCTCAGAGACGCTGTaGAGGGCGTTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: QVEGAASPCVHSWTQMVPFSETL*RALHIS
Trigger: TGAAATGTGCAACGCCCTCAACAGCGTCTCTGAGAA...GGGAACCATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCTGAGCCAAGTGGAAGGAGCTGCCTCTCCTTGTGTTCACAGCTGGACCCAGATTTCTCAGAGACGCTGTaGAGGGCGTTGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: AEPSGRSCLSLCSQLDPDFSETL*RALHIS
Trigger: TGAAATGTGCAACGCCCTCAACAGCGTCTCTGAGAA...ATCTGGGTCCAGCTGTGAACACAAGGAGAGGCAGCTCCTTCCACTTGGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp GTACGTGGTACCCGAAATGGTGAATTCATGCAAACGACAGGTGCCTaGCTCTGCTTCAGCCACCACGAACATCCTGCAGACAGACATCTG +
Preference number: 5 (lower is better)
Translates to: VRGTRNGEFMQTTGA*LCFSHHEHPADRHL
Trigger: CAGATGTCTGTCTGCAGGATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATGAATTCACCATTTCGGGTACCACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTATTGCACTCTCTGCGTaGCGTTCCTGCCACACTCCC +
Preference number: 5 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGAIALSA*RSCHTP
Trigger: GGGAGTGTGGCAGGAACGCAACGCAGAGAGTGCAAT...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GTGGCAGGAGAAGCTGACATGGACCCAGGGATGCCTGGAGTCTCAGACACCAGGTTGCCTGATGCAATATaGGTGCCAGAAAATAGCATG +
Preference number: 5 (lower is better)
Translates to: VAGEADMDPGMPGVSDTRLPDAI*VPENSM
Trigger: CATGCTATTTTCTGGCACCAATATTGCATCAGGCAA...CCTGGTGTCTGAGACTCCAGGCATCCCTGGGTCCATGTCAGCTTCTCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GGCTCACTCCTGGGAAAGGGAGTCATTGTCCAGGCCCGCCCCCTGCTTCTTATGTTGCCTGATGCAATATaGGTGCCAGAAAATAGCATG +
Preference number: 5 (lower is better)
Translates to: GSLLGKGVIVQARPLLLMLPDAI*VPENSM
Trigger: CATGCTATTTTCTGGCACCAATATTGCATCAGGCAA...CATAAGAAGCAGGGGGCGGGCCTGGACAATGACTCCCTTTCCCAGGAGTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCAGGCCACACCCAGGGCTTaGCCTGATGCAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: EQRVMPGDQAASDKVSHQATPRA*PDAILV
Trigger: CACCAATATTGCATCAGGCAAAGCCCTGGGTGTGGC...CTGGTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTACGTGCCATACGTCTaGTGCCCAGGGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: THLYFSIRNNQQVGTALCYVPYV*CPGPGM
Trigger: CATGCCTGGCCCTGGGCACAAGACGTATGGCACGTA...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTACAGCTGTCCCTTTGTaGTCCCCTGTGATCATGACC +
Preference number: 5 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASTAVPL*SPVIMT
Trigger: GGTCATGATCACAGGGGACAACAAAGGGACAGCTGT...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTATCTCTGCTGCTGACTaGGCCACAGCAGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGAISAAD*ATAVPE
Trigger: CTCAGGCACTGCTGTGGCCAAGTCAGCAGCAGAGAT...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp ACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCAGATCTGGTGGGTaGAAGCCAAGGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: THLYFSIRNNQQVGTALCSRSGG*KPRAVA
Trigger: GGCCACAGCCCTTGGCTTCAACCCACCAGATCTGGA...GCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAGCAAGTGACAAAGTATCACACCAGGCTGGGTGGCAGGAGAAGCTGACATGGCTGATAGAAGGTGACTaGAGGTCCCTCGGTGTCATA +
Preference number: 5 (lower is better)
Translates to: AASDKVSHQAGWQEKLTWLIEGD*RSLGVI
Trigger: TATGACACCGAGGGACCTCAAGTCACCTTCTATCAG...CCATGTCAGCTTCTCCTGCCACCCAGCCTGGTGTGATACTTTGTCACTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS TCA 90 bp TGCCTACTCCGAGCCTGCATAAATGTCCCGAGAACACCATCCATGTaGTTCCTGGACAGATACTTGAGGGCCTCATCGAGCAGGATGACA +
Preference number: 5 (lower is better)
Translates to: CLLRACINVPRTPSM*FLDRYLRASSSRMT
Trigger: TGTCATCCTGCTCGATGAGGCCCTCAAGTATCTGTCCAGGAATCACATGGATGGTGTTCTCGGGACATTTATGCAGGCTCGGAGTAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 90 bp TCAATTACACTCTCAGGAGCTCCCTTCACAAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGAGTAGGTGTGCAGTACACGGACATA +
Preference number: 5 (lower is better)
Translates to: SITLSGAPFTNILLP*TLGSARVGVQYTDI
Trigger: TATGTCCGTGTACTGCACACCTACTCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGGAGCTCCTGAGAGTGTAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTGACAAAGTATCACACCCTTCAAGGCCTCAATaGCACTCTCTGCGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: AEQRVMPGDQAASDKVSHPSRPQ*HSLRCV
Trigger: AACGCAACGCAGAGAGTGCAATTGAGGCCTTGAAGG...GTGTGATACTTTGTCACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGGACTCAGCTTCTGGGCCAGAGCAGTAGGGAGGGACAGAAATGGGAGACGGGATTGCCTGATGCAATATaGGTGCCAGAAAATAGCATG +
Preference number: 5 (lower is better)
Translates to: WTQLLGQSSREGQKWETGLPDAI*VPENSM
Trigger: CATGCTATTTTCTGGCACCAATATTGCATCAGGCAA...TCCCGTCTCCCATTTCTGTCCCTCCCTACTGCTCTGGCCCAGAAGCTGAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCAGCCACACCCAGGGCTTaGCCTGATGCAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: LFLHQKQSASGHSALLLPATPRA*PDAILV
Trigger: CACCAATATTGCATCAGGCAAAGCCCTGGGTGTGGC...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TATAAACAGACACAGGAGTGGACTTGGTGGAAGCTGAGCCAAGTGGAAGGAGCTTCCAGCGCAGAATCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: YKQTQEWTWWKLSQVEGASSAES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGA...AGCTCCTTCCACTTGGCTCAGCTTCCACCAAGTCCACTCCTGTGTCTGTTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CACGAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCCTGATAGAAGGTGACTaGAGGTCCCTCGGTGTCATA +
Preference number: 5 (lower is better)
Translates to: HEMLSFSGEVGEEVPYGVLIEGD*RSLGVI
Trigger: TATGACACCGAGGGACCTCAAGTCACCTTCTATCAG...GACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TGTATGCTAGGAGGAGCAGAGCAAAGAGTAATGCCAGGGGACCAGGCAGCAAGTCTGATAGAAGGTGACTaGAGGTCCCTCGGTGTCATA +
Preference number: 5 (lower is better)
Translates to: CMLGGAEQRVMPGDQAASLIEGD*RSLGVI
Trigger: TATGACACCGAGGGACCTCAAGTCACCTTCTATCAG...ACTTGCTGCCTGGTCCCCTGGCATTACTCTTTGCTCTGCTCCTCCTAGCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp GAGATGCTTTCTTTCAGTGGGGAGGTAGGGGAGGAAGTCCCTTATGGAGTCACTCCAGCAAACAGTGGATaGTCTTCAGAGCACTTCAGG +
Preference number: 5 (lower is better)
Translates to: EMLSFSGEVGEEVPYGVTPANSG*SSEHFR
Trigger: CCTGAAGTGCTCTGAAGACAATCCACTGTTTGCTGG...AGTGACTCCATAAGGGACTTCCTCCCCTACCTCCCCACTGAAAGAAAGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp AGGCCATGGTTGTGGGGAAGCGTGACTCAAAAACCTTGCAGTCAATaGCAGCAAACAGTGGATTGTCTTCAGAGCACTTCAGGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: RPWLWGSVTQKPCSQ*QQTVDCLQSTSGSS
Trigger: GGAACTTCCTGAAGTGCTCTGAAGACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGTCCAGCGCAGAATCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PQTHTFISPSETISKWAQSSAES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGA...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 90 bp GCACAGATAAGGCCATGGTTGTGGGGAAGCGTGACTCAAAAACCTTaGAGTCAATGCCAGCAAACAGTGGATTGTCTTCAGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: AQIRPWLWGSVTQKP*SQCQQTVDCLQSTS
Trigger: TGAAGTGCTCTGAAGACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTTATCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 90 bp CGTTGCACATTTCAATGGTCACAAGCACAGATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAACCTTGCAGTCAATGCCAGCAAACA +
Preference number: 5 (lower is better)
Translates to: RCTFQWSQAQIRPWL*GSVTQKPCSQCQQT
Trigger: TGTTTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTTATCTGTGCTTGTGACCATTGAAATGTGCAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp CCTCAGACACACACCTTTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCTGATAGAAGGTGACTaGAGGTCCCTCGGTGTCATA +
Preference number: 5 (lower is better)
Translates to: PQTHTFISPSETISKWAQLIEGD*RSLGVI
Trigger: TATGACACCGAGGGACCTCAAGTCACCTTCTATCAG...CTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAAAGGTGTGTGTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS-3UTR CAA 90 bp TTATTTCTCCATCAGAAACAATCAGCAAGTGGGCACAGCGCTCTGCTCCTGCCATTGCCTGATGCAATATaGGTGCCAGAAAATAGCATG +
Preference number: 5 (lower is better)
Translates to: LFLHQKQSASGHSALLLPLPDAI*VPENSM
Trigger: CATGCTATTTTCTGGCACCAATATTGCATCAGGCAA...TGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp CGGGCAAAGCACCGGGCAGTGCGACAAGCCTGGCGCTaGTGCTCTGGGCTGAGGTCATCAAACTCACGGCCC +
Preference number: 6 (lower is better)
Translates to: RAKHRAVRQAWR*CSGLRSSNSRP
Trigger: GGGCCGTGAGTTTGATGACCTCAGCCCAGAGCAGCAGCGCCAGGCTTGTCGCACTGCCCGGTGCTTTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp TGCAATGGCGTCCGCTCAGGCTCCACAGCCGCCATCTaGCTCCGAATCTTGCCCAGCTCTGTCTGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: CNGVRSGSTAAI*LRILPSSVCRP
Trigger: AGGCCTGCAGACAGAGCTGGGCAAGATTCGGAGCCAGATGGCGGCTGTGGAGCCTGAGCGGACGCCATTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp TCCACTAGCCCATCAAACTGCCCACAGCGCACAGGCTaGTCCCCTTGCCTCACTTCGCCCTCTGGGGTGTAC +
Preference number: 6 (lower is better)
Translates to: STSPSNCPQRTG*SPCLTSPSGVY
Trigger: GTACACCCCAGAGGGCGAAGTGAGGCAAGGGGAGCAGCCTGTGCGCTGTGGGCAGTTTGATGGGCTAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp AGCCCCAGTCCCGGATCTTGGCCAGGATATGCTCTCTaGAAGTGGTGCTCAGGGGTGCTGTTCGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SPSPGSWPGYAL*KWCSGVLFGCP
Trigger: TGGGCAGCCGAACAGCACCCCTGAGCACCACTTCCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS TCA 72 bp CAGCCAAGGGTTCAGCCAGGGTGGCATGCGCAGCAGTaGCTGGTTCTCAGAGACGCTGTTGAGGGCGTTGCA +
Preference number: 6 (lower is better)
Translates to: QPRVQPGWHAQQ*LVLRDAVEGVA
Trigger: TGCAACGCCCTCAACAGCGTCTCTGAGAACCAGTCACTGCTGCGCATGCCACCCTGGCTGAACCCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp GCAGTGTGTCAGAGCCTGAGCCCCAGTCCCGGATCTTaGCCAGGATATGCTCTCTGGAAGTGGTGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: AVCQSLSPSPGS*PGYALWKWCSG
Trigger: CCCTGAGCACCACTTCCAGAGAGCATATCCTGGCCAAGATCCGGGACTGGGGCTCAGGCTCTGACACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp ATGGCATGGGACAGCTGCCTCCCAAATTCATCCAGCTaGCGCTGCAATGGCGTCCGCTCAGGCTCCACAGCC +
Preference number: 6 (lower is better)
Translates to: MAWDSCLPNSSS*RCNGVRSGSTA
Trigger: GGCTGTGGAGCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTGGGAGGCAGCTGTCCCATGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 90 bp ATCACAGAGATGGCATGGGACAGCTGCCTCCCAAATTCATCCAGCTaGCGCTGCAATGGCGTCCGCTCAGGCTCCACAGCCGCCATCTGG +
Preference number: 6 (lower is better)
Translates to: ITEMAWDSCLPNSSS*RCNGVRSGSTAAIW
Trigger: CCAGATGGCGGCTGTGGAGCCTGAGCGGACGCCATTGCAGCGCAAGCTGGATGAATTTGGGAGGCAGCTGTCCCATGCCATCTCTGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp AGCCCAGCGTCTCCACAGAAGGCAGGCTCCGCACAATaGCATTCTTACGTGCCATACGTCTTGTGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SPASPQKAGSAQ*HSYVPYVLCPG
Trigger: CCCTGGGCACAAGACGTATGGCACGTAAGAATGCCATTGTGCGGAGCCTGCCTTCTGTGGAGACGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp AGTCCAGCGCAGAATCATTGCAGAGGGCACAGATGGTaGCGAGCTCCACTAGCCCATCAAACTGCCCACAGC +
Preference number: 6 (lower is better)
Translates to: SPAQNHCRGHRW*RAPLAHQTAHS
Trigger: GCTGTGGGCAGTTTGATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp CAAGGGTTCAGCCAGGGTGGCATGCGCAGCAGTGACTaGTTCTCAGAGACGCTGTTGAGGGCGTTGCACATT +
Preference number: 6 (lower is better)
Translates to: QGFSQGGMRSSD*FSETLLRALHI
Trigger: AATGTGCAACGCCCTCAACAGCGTCTCTGAGAACCAGTCACTGCTGCGCATGCCACCCTGGCTGAACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp TCTGCGTTGCGTTCCTGCCACACTCCCACGATCGCATaGGCCACGAGAATTAGCATGATGACCAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SALRSCHTPTIA*ATRISMMTRGS
Trigger: GGAGCCCCTGGTCATCATGCTAATTCTCGTGGCCAATGCGATCGTGGGAGTGTGGCAGGAACGCAACGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp GACTTGATCTCGATGAGACGGAGGTCAGCGGGTACCTaGTCTCCCACTGCCACTTCCACAATGTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: DLISMRRRSAGT*SPTATSTMSPG
Trigger: CCCTGGGGACATTGTGGAAGTGGCAGTGGGAGACAAGGTACCCGCTGACCTCCGTCTCATCGAGATCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp GGAGCTCCCTTCACAAACATCTTGCTGCCCTGGACCTaGGGGTCAGCACGAGTAGGTGTGCAGTACACGGAC +
Preference number: 6 (lower is better)
Translates to: GAPFTNILLPWT*GSARVGVQYTD
Trigger: GTCCGTGTACTGCACACCTACTCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp TGTAGTCCAGCGCAGAATCATTGCAGAGGGCACAGATaGTGGCGAGCTCCACTAGCCCATCAAACTGCCCAC +
Preference number: 6 (lower is better)
Translates to: CSPAQNHCRGHR*WRAPLAHQTAH
Trigger: GTGGGCAGTTTGATGGGCTAGTGGAGCTCGCCACCATCTGTGCCCTCTGCAATGATTCTGCGCTGGACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp CTCTCAGGAGCTCCCTTCACAAACATCTTGCTGCCCTaGACCTTGGGGTCAGCACGAGTAGGTGTGCAGTAC +
Preference number: 6 (lower is better)
Translates to: LSGAPFTNILLP*TLGSARVGVQY
Trigger: GTACTGCACACCTACTCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGGAGCTCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS TCA 72 bp CTTCGCCCTCTGGGGTGTACGTGGTACCCGAAATGGTaGATTCATGCAAACGACAGGTGCCTGCCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LRPLGCTWYPKW*IHANDRCLPLL
Trigger: AAGCAGAGGCAGGCACCTGTCGTTTGCATGAATTCACCATTTCGGGTACCACGTACACCCCAGAGGGCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp GTCTCGTACTGTACAAACCGGCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGGGGTGTGTCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: VSYCTNRLQSSR*MSSFLGGVSLV
Trigger: CACCAGGGACACACCCCCAAGGAAGGAGGACATGCATCTAGATGACTGCAGCCGGTTTGTACAGTACGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS GCA 72 bp CTGCACAGGGATCAGAGCTTCGGGCAGGCCCAGAATTaGTGTGAGGAAGATGCAGACAACCTCGCCAACATT +
Preference number: 6 (lower is better)
Translates to: LHRDQSFGQAQN*CEEDADNLANI
Trigger: AATGTTGGCGAGGTTGTCTGCATCTTCCTCACAGCAATTCTGGGCCTGCCCGAAGCTCTGATCCCTGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp ACCTCGTACTGTACAAACCGGCTGCAGTCATCTAGATaGATGTCCTCCTTCCTTGGGGGTGTGTCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: TSYCTNRLQSSR*MSSFLGGVSLV
Trigger: CACCAGGGACACACCCCCAAGGAAGGAGGACATGCATCTAGATGACTGCAGCCGGTTTGTACAGTACGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108484.8
ENSMUST00000108486.8
CDS CAA 90 bp ACACTCTCAGGAGCTCCCTTCACAAACATCTTGCTGCCCTGGACCTaGGGGTCAGCACGAGTAGGTGTGCAGTACACGGACATAGACTTC +
Preference number: 6 (lower is better)
Translates to: TLSGAPFTNILLPWT*GSARVGVQYTDIDF
Trigger: GAAGTCTATGTCCGTGTACTGCACACCTACTCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGGAGCTCCTGAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp TTCAAGGCCTCAATTGCACTCTCTGCGTTGCGTTCCTaGCACACTCCCACGATCGCATTGGCCACGAGAATT +
Preference number: 6 (lower is better)
Translates to: FKASIALSALRS*HTPTIALATRI
Trigger: AATTCTCGTGGCCAATGCGATCGTGGGAGTGTGGCAGGAACGCAACGCAGAGAGTGCAATTGAGGCCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp ACCCGAAATGGTGAATTCATGCAAACGACAGGTGCCTaGCTCTGCTTCAGCCACCACGAACATCCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: TRNGEFMQTTGA*LCFSHHEHPAD
Trigger: GTCTGCAGGATGTTCGTGGTGGCTGAAGCAGAGGCAGGCACCTGTCGTTTGCATGAATTCACCATTTCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp CGAAGGTCAGGTCTGTCTCGTACTGTACAAACCGGCTaGAGTCATCTAGATGCATGTCCTCCTTCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: RRSGLSRTVQTG*SHLDACPPSLG
Trigger: CCCCAAGGAAGGAGGACATGCATCTAGATGACTGCAGCCGGTTTGTACAGTACGAGACAGACCTGACCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108485.9
ENSMUST00000163326.8
CDS TCA 72 bp CGAGCCTGCATAAATGTCCCGAGAACACCATCCATGTaGTTCCTGGACAGATACTTGAGGGCCTCATCGAGC +
Preference number: 6 (lower is better)
Translates to: RACINVPRTPSM*FLDRYLRASSS
Trigger: GCTCGATGAGGCCCTCAAGTATCTGTCCAGGAATCACATGGATGGTGTTCTCGGGACATTTATGCAGGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021142.8
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp TCAATTACACTCTCAGGAGCTCCCTTCACAAACATCTaGCTGCCCTGGACCTTGGGGTCAGCACGAGTAGGT +
Preference number: 6 (lower is better)
Translates to: SITLSGAPFTNI*LPWTLGSARVG
Trigger: ACCTACTCGTGCTGACCCCAAGGTCCAGGGCAGCAAGATGTTTGTGAAGGGAGCTCCTGAGAGTGTAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp GCACTTCAGGAAGTTCCTCAGCTGATAGAAGGTGACTaGAGGTCCCTCGGTGTCATACAGGAACCACCAGGT +
Preference number: 6 (lower is better)
Translates to: ALQEVPQLIEGD*RSLGVIQEPPG
Trigger: ACCTGGTGGTTCCTGTATGACACCGAGGGACCTCAAGTCACCTTCTATCAGCTGAGGAACTTCCTGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 90 bp GGGCGTTGCACATTTCAATGGTCACAAGCACAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAAAAACCTTGCAGTCAATGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: GRCTFQWSQAQIRPW*WGSVTQKPCSQCQQ
Trigger: TTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTTATCTGTGCTTGTGACCATTGAAATGTGCAACGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS GCA 72 bp AGGCCATGGTTGTGGGGAAGCGTGACTCAAAAACCTTaGAGTCAATGCCAGCAAACAGTGGATTGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: RPWLWGSVTQKP*SQCQQTVDCLQ
Trigger: CTGAAGACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 90 bp AGCACAGATAAGGCCATGGTTGTGGGGAAGCGTGACTCAAAAACCTaGCAGTCAATGCCAGCAAACAGTGGATTGTCTTCAGAGCACTTC +
Preference number: 6 (lower is better)
Translates to: STDKAMVVGKRDSKT*QSMPANSGLSSEHF
Trigger: GAAGTGCTCTGAAGACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTTATCTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp AAGGCCATGGTTGTGGGGAAGCGTGACTCAAAAACCTaGCAGTCAATGCCAGCAAACAGTGGATTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: KAMVVGKRDSKT*QSMPANSGLSS
Trigger: TGAAGACAATCCACTGTTTGCTGGCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CCA 72 bp TTTCAATGGTCACAAGCACAGATAAGGCCATGGTTGTaGGGAAGCGTGACTCAAAAACCTTGCAGTCAATGC +
Preference number: 6 (lower is better)
Translates to: FQWSQAQIRPWL*GSVTQKPCSQC
Trigger: GCATTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTTATCTGTGCTTGTGACCATTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8
CDS CAA 72 bp ACATTTCAATGGTCACAAGCACAGATAAGGCCATGGTaGTGGGGAAGCGTGACTCAAAAACCTTGCAGTCAA +
Preference number: 6 (lower is better)
Translates to: TFQWSQAQIRPW*WGSVTQKPCSQ
Trigger: TTGACTGCAAGGTTTTTGAGTCACGCTTCCCCACAACCATGGCCTTATCTGTGCTTGTGACCATTGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021142.8
ENSMUST00000108484.8
ENSMUST00000108485.9
ENSMUST00000108486.8
ENSMUST00000163326.8