Pregenerated sensors for ATP23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025436Ensembl transcript IDs: ENSMUST00000026504.13, ENSMUST00000168520.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ATCAGCACGTTCTGCACTTTATGCGTAGACCCTAACTaGCCATTTACATTTTATACATTCTGTGCCGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: ISTFCTLCVDPN*PFTFYTFCAEE Trigger: TTCTTCGGCACAGAATGTATAAAATGTAAATGGTCAGTTAGGGTCTACGCATAAAGTGCAGAACGTGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| 3UTR TCA 72 bp | AGAAACAGCGACTACTTAATCAGGTTGTTATGTGACTaGAATGAAGTCAAATATAGTCAGACACCAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: RNSDYLIRLLCD*NEVKYSQTPKS Trigger: TGACTTTGGTGTCTGACTATATTTGACTTCATTTCAGTCACATAACAACCTGATTAAGTAGTCGCTGTTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026504.13 |
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| CDS-3UTR CCA 90 bp | ACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCCTGACAGGCGGCTACCAGAGAGGAAGCCCTGCTaGGGCTTCCCGTGGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TFCAEEPHVPHGPDRRLPERKPC*GFPWAG Trigger: GCCGGCCCACGGGAAGCCCCAGCAGGGCTTCCTCTC...TGGTAGCCGCCTGTCAGGACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR GCA 90 bp | ACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCCTGACAGGCGGCTACCACCAGAGTCGGGTCGCTaGAGCAGTGGCTCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TFCAEEPHVPHGPDRRLPPESGR*SSGSPA Trigger: GGCTGGCGAGCCACTGCTGCAGCGACCCGACTCTGG...TGGTAGCCGCCTGTCAGGACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR TCA 90 bp | ACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCCTGACAGGCGGCTACCAAACTCTGGTCCCGGGTaGAGAGGCTGGAGAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TFCAEEPHVPHGPDRRLPNSGPG*RGWRGS Trigger: GCTTCCTCTCCAGCCTCTTCACCCGGGACCAGAGTT...TGGTAGCCGCCTGTCAGGACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR CCA 90 bp | ACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCCTGACAGGCGGCTACCATCATCCACAGCCTTCTaGGCCTCCTCTCTGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: TFCAEEPHVPHGPDRRLPSSTAF*ASSLLT Trigger: CGTCAGCAGAGAGGAGGCCCAGAAGGCTGTGGATGA...TGGTAGCCGCCTGTCAGGACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR CCA 90 bp | ATGAAGTCAAATATAGTCAGACACCAAAGTCATAACAGTCAGACCATGATGGACGAGAGGAAGCCCTGCTaGGGCTTCCCGTGGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: MKSNIVRHQSHNSQTMMDERKPC*GFPWAG Trigger: GCCGGCCCACGGGAAGCCCCAGCAGGGCTTCCTCTC...GTCCATCATGGTCTGACTGTTATGACTTTGGTGTCTGACTATATTTGACTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026504.13 |
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| CDS-3UTR GCA 90 bp | TCAGGTTGTTATGTGACTGAAATGAAGTCAAATATAGTCAGACACCAAAGTCATCCAGAGTCGGGTCGCTaGAGCAGTGGCTCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGCYVTEMKSNIVRHQSHPESGR*SSGSPA Trigger: GGCTGGCGAGCCACTGCTGCAGCGACCCGACTCTGG...ATGACTTTGGTGTCTGACTATATTTGACTTCATTTCAGTCACATAACAACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026504.13 |
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| CDS-3UTR CCA 90 bp | TTACATTTTATACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCCTGACATATCTGGCATACGTCTaGTTATGTGGGATCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LHFIHSVPKNPMFLTVLTYLAYV*LCGILP Trigger: CGGCAGGATCCCACATAACCAGACGTATGCCAGATA...TGTCAGGACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGTATAAAATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR TCA 90 bp | TCAAATATAGTCAGACACCAAAGTCATAACAGTCAGACCATGATGGACAAAATTAACTCTGGTCCCGGGTaGAGAGGCTGGAGAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SNIVRHQSHNSQTMMDKINSGPG*RGWRGS Trigger: GCTTCCTCTCCAGCCTCTTCACCCGGGACCAGAGTT...AATTTTGTCCATCATGGTCTGACTGTTATGACTTTGGTGTCTGACTATATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026504.13 |
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| CDS-3UTR TCA 90 bp | GACCATTTACATTTTATACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCGTTCACAGCACAACCTaGGTGTTTCATAGCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: DHLHFIHSVPKNPMFLTVVHSTT*VFHSIK Trigger: CTTGATGCTATGAAACACTCAGGTTGTGCTGTGAAC...GACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGTATAAAATGTAAATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR TCA 90 bp | ATGAAGTCAAATATAGTCAGACACCAAAGTCATAACAGTCAGACCATGATGGACGTTCACAGCACAACCTaGGTGTTTCATAGCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: MKSNIVRHQSHNSQTMMDVHSTT*VFHSIK Trigger: CTTGATGCTATGAAACACTCAGGTTGTGCTGTGAAC...GTCCATCATGGTCTGACTGTTATGACTTTGGTGTCTGACTATATTTGACTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026504.13 |
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| CDS CCA 90 bp | GGACAACTCTGGTCCCGGGTGAAGAGGCTGGAGAGGAAGCCCTGCTaGGGCTTCCCGTGGGCCGGCGGCTCAGGCGAGCCCTGGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GQLWSRVKRLERKPC*GFPWAGGSGEPWPE Trigger: CTCTGGCCAGGGCTCGCCTGAGCCGCCGGCCCACGGGAAGCCCCAGCAGGGCTTCCTCTCCAGCCTCTTCACCCGGGACCAGAGTTGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS GCA 90 bp | CAGCCTGAAGAGTTCGTTCACAAGGGAGCAGTCCCCGCTGAGGCTTaGGGCTCGAATCTCCGAGCACGCCAGATGTCTGATGTTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: QPEEFVHKGAVPAEA*GSNLRARQMSDVGE Trigger: TTCACCAACATCAGACATCTGGCGTGCTCGGAGATTCGAGCCGCAAGCCTCAGCGGGGACTGCTCCCTTGTGAACGAACTCTTCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS CCA 90 bp | TGGAGTAGTAGCGGTCCCGGTTCTGAAAGTCCCTGTGAGCGTATCTaGCATACGTCTGGTTATGTGGGATCCTGCCGAAGGGCTCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: WSSSGPGSESPCERI*HTSGYVGSCRRAPG Trigger: ACCGGGAGCCCTTCGGCAGGATCCCACATAACCAGACGTATGCCAGATACGCTCACAGGGACTTTCAGAACCGGGACCGCTACTACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS TCA 90 bp | CATACGTCTGGTTATGTGGGATCCTGCCGAAGGGCTCCCGGTCATTaGAACAGGTCTGGAAGACTTCATCCACAGCCTTCTGGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HTSGYVGSCRRAPGH*NRSGRLHPQPSGPP Trigger: AGGAGGCCCAGAAGGCTGTGGATGAAGTCTTCCAGACCTGTTTCAATGACCGGGAGCCCTTCGGCAGGATCCCACATAACCAGACGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS CCA 90 bp | TCCCGGTCATTGAAACAGGTCTGGAAGACTTCATCCACAGCCTTCTaGGCCTCCTCTCTGCTGACGTTCCGGACAGCCAAGATAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SRSLKQVWKTSSTAF*ASSLLTFRTAKIER Trigger: TCTCTCTATCTTGGCTGTCCGGAACGTCAGCAGAGAGGAGGCCCAGAAGGCTGTGGATGAAGTCTTCCAGACCTGTTTCAATGACCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS CCA 90 bp | GTTCTGAAAGTCCCTGTGAGCGTATCTGGCATACGTCTGGTTATGTaGGATCCTGCCGAAGGGCTCCCGGTCATTGAAACAGGTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: VLKVPVSVSGIRLVM*DPAEGLPVIETGLE Trigger: TTCCAGACCTGTTTCAATGACCGGGAGCCCTTCGGCAGGATCCCACATAACCAGACGTATGCCAGATACGCTCACAGGGACTTTCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS-3UTR CAA 90 bp | TTACATTTTATACATTCTGTGCCGAAGAACCCCATGTTCCTCACGGTCCTGACAAAGGGCTCCCGGTCATaGAAACAGGTCTGGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: LHFIHSVPKNPMFLTVLTKGSRS*KQVWKT Trigger: AGTCTTCCAGACCTGTTTCAATGACCGGGAGCCCTT...TGTCAGGACCGTGAGGAACATGGGGTTCTTCGGCACAGAATGTATAAAATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS GCA 72 bp | GGCGGCTCAGGCGAGCCCTGGCCAGAGTCGGGTCGCTaGAGCAGTGGCTCGCCAGCCGCAGGGCCGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GGSGEPWPESGR*SSGSPAAGPSS Trigger: CGAGCTCGGCCCTGCGGCTGGCGAGCCACTGCTGCAGCGACCCGACTCTGGCCAGGGCTCGCCTGAGCCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS CAA 90 bp | GCATACGTCTGGTTATGTGGGATCCTGCCGAAGGGCTCCCGGTCATaGAAACAGGTCTGGAAGACTTCATCCACAGCCTTCTGGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AYVWLCGILPKGSRS*KQVWKTSSTAFWAS Trigger: GGAGGCCCAGAAGGCTGTGGATGAAGTCTTCCAGACCTGTTTCAATGACCGGGAGCCCTTCGGCAGGATCCCACATAACCAGACGTATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS CCA 72 bp | ATCCTGCCGAAGGGCTCCCGGTCATTGAAACAGGTCTaGAAGACTTCATCCACAGCCTTCTGGGCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ILPKGSRSLKQV*KTSSTAFWASS Trigger: AGAGGAGGCCCAGAAGGCTGTGGATGAAGTCTTCCAGACCTGTTTCAATGACCGGGAGCCCTTCGGCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS CCA 72 bp | AGCGGTCCCGGTTCTGAAAGTCCCTGTGAGCGTATCTaGCATACGTCTGGTTATGTGGGATCCTGCCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SGPGSESPCERI*HTSGYVGSCRR Trigger: CCTTCGGCAGGATCCCACATAACCAGACGTATGCCAGATACGCTCACAGGGACTTTCAGAACCGGGACCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS CCA 72 bp | GTCCCTGTGAGCGTATCTGGCATACGTCTGGTTATGTaGGATCCTGCCGAAGGGCTCCCGGTCATTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: VPVSVSGIRLVM*DPAEGLPVIET Trigger: TGTTTCAATGACCGGGAGCCCTTCGGCAGGATCCCACATAACCAGACGTATGCCAGATACGCTCACAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168520.3 |
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| CDS CCA 72 bp | AGAAGTTTGACATATGGATTGGTATCCAGCGTCTTCTaGAGCATGAGCGGACAACTCTGGTCCCGGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RSLTYGLVSSVF*SMSGQLWSRVK Trigger: CTTCACCCGGGACCAGAGTTGTCCGCTCATGCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS CAA 90 bp | CAACCTGAGTGTTTCATAGCATCAAGTAGAAGTTTGACATATGGATaGGTATCCAGCGTCTTCTGGAGCATGAGCGGACAACTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QPECFIASSRSLTYG*VSSVFWSMSGQLWS Trigger: GGACCAGAGTTGTCCGCTCATGCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCTACTTGATGCTATGAAACACTCAGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS CAA 90 bp | CTGTTCACAGCACAACCTGAGTGTTTCATAGCATCAAGTAGAAGTTaGACATATGGATTGGTATCCAGCGTCTTCTGGAGCATGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: LFTAQPECFIASSRS*TYGLVSSVFWSMSG Trigger: TCCGCTCATGCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCTACTTGATGCTATGAAACACTCAGGTTGTGCTGTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS CAA 72 bp | GCACAACCTGAGTGTTTCATAGCATCAAGTAGAAGTTaGACATATGGATTGGTATCCAGCGTCTTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: AQPECFIASSRS*TYGLVSSVFWS Trigger: GCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCTACTTGATGCTATGAAACACTCAGGTTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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| CDS CAA 72 bp | TGTTTCATAGCATCAAGTAGAAGTTTGACATATGGATaGGTATCCAGCGTCTTCTGGAGCATGAGCGGACAA | + |
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Preference number: 6 (lower is better) Translates to: CFIASSRSLTYG*VSSVFWSMSGQ Trigger: TTGTCCGCTCATGCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCTACTTGATGCTATGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026504.13 ENSMUST00000168520.3 |
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