Pregenerated sensors for ATP1B4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016327Ensembl transcript IDs: ENSMUST00000016471.9, ENSMUST00000115134.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTaGACCTGGAGTCAGATGCAATGCAGGTTGTTTCCCTTAAAGATC | + |
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Preference number: 1 (lower is better) Translates to: RWYFLVSSSSELREH*TWSQMQCRLFPLKI Trigger: GATCTTTAAGGGAAACAACCTGCATTGCATCTGACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CCA 90 bp | TGGGCTCATTTGTCCACTCTTCCTCCTCTCCCCCAATTCCTGTCTTaGTTTTGTCCTTTCTGTCATGGATTCACTCCTGATGTTATGACT | + |
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Preference number: 1 (lower is better) Translates to: WAHLSTLPPLPQFLS*FCPFCHGFTPDVMT Trigger: AGTCATAACATCAGGAGTGAATCCATGACAGAAAGGACAAAACCAAGACAGGAATTGGGGGAGAGGAGGAAGAGTGGACAAATGAGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR TCA 90 bp | CCAATTCCTGTCTTGGTTTTGTCCTTTCTGTCATGGATTCACTCCTaGTGTTATGACTGCCCCAGTGCTCTTGATCAAATGCAAATGTGC | + |
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Preference number: 1 (lower is better) Translates to: PIPVLVLSFLSWIHS*CYDCPSALDQMQMC Trigger: GCACATTTGCATTTGATCAAGAGCACTGGGGCAGTCATAACATCAGGAGTGAATCCATGACAGAAAGGACAAAACCAAGACAGGAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CCA 90 bp | TGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCACAGCTaGAGAGAGTCATTGTGCCTCATGTTTCCCATAGCATTTCCGTAT | + |
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Preference number: 1 (lower is better) Translates to: CLWLRMCHFLCYCHS*RESLCLMFPIAFPY Trigger: ATACGGAAATGCTATGGGAAACATGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CCA 90 bp | GTGAACTGTTCAGAATCACCAAAGCACAAGATGTCTTCATGCTTATaGCTTCGAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VNCSESPKHKMSSCL*LRMCHFLCYCHSWR Trigger: TCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGTGCTTTGGTGATTCTGAACAGTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR TCA 90 bp | GTAGTAGTCTTGGTTGGTCTGATGTTGGTTTCTGAGAAAAGACCTTaGCAGGCAGTTTTAAAGATGTCTATGGGTTGGTTAGATTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VVVLVGLMLVSEKRP*QAVLKMSMGWLDSG Trigger: CCCAGAATCTAACCAACCCATAGACATCTTTAAAACTGCCTGTCAAGGTCTTTTCTCAGAAACCAACATCAGACCAACCAAGACTACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR GCA 90 bp | TCTCATGTGAACTGTTCAGAATCACCAAAGCACAAGATGTCTTCATaGTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: SHVNCSESPKHKMSS*LWLRMCHFLCYCHS Trigger: GCTGTGACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGTGCTTTGGTGATTCTGAACAGTTCACATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CCA 90 bp | GAAACTAAACATTGTAGAGTAGATCAGATTCTGCAGCCTTGTAAGTaGAATTTAAGTTTGCTTTGGACCCTGAGACAGGATGCTGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: ETKHCRVDQILQPCK*NLSLLWTLRQDAGL Trigger: CAGACCAGCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATTCCACTTACAAGGCTGCAGAATCTGATCTACTCTACAATGTTTAGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR TCA 90 bp | TTCTGTAGAGAGAGTAGTAGTCTTGGTTGGTCTGATGTTGGTTTCTaGGAAAAGACCTTGACAGGCAGTTTTAAAGATGTCTATGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: FCRESSSLGWSDVGF*EKTLTGSFKDVYGL Trigger: CAACCCATAGACATCTTTAAAACTGCCTGTCAAGGTCTTTTCTCAGAAACCAACATCAGACCAACCAAGACTACTACTCTCTCTACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR GCA 90 bp | ATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTaGCTCATGTTTCCCATAGCATTTCCGTATACTATTTTTAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: MCHFLCYCHSWRESL*LMFPIAFPYTIFRS Trigger: AGACCTAAAAATAGTATACGGAAATGCTATGGGAAACATGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTTTATGGTGGAGTGGCTaGTGGGAGTGGCTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSLWWSG*WEWLPG Trigger: TCCAGGGAGCCACTCCCACCAGCCACTCCACCATAA...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTGGCTTCAGGGAGGCCTaGCAGAAGCTTTCTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSGFREA*QKLSVL Trigger: CAAGACAGAAAGCTTCTGTCAGGCCTCCCTGAAGCC...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTGGTTATAGCTGTGGGTaGGGGGTGGGGTTCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSGYSCG*GVGFKA Trigger: TGCCTTGAACCCCACCCCCCACCCACAGCTATAACC...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCATTATGGTGGAGTGGCTaGTGGGAGTGGCTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ECVISSVTVTAGESHCASLWWSG*WEWLPG Trigger: TCCAGGGAGCCACTCCCACCAGCCACTCCACCATAA...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCATCAGAATTAGATTATaGTGGAGTGGCTGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ETGCWSVMLASSFCPSPPIRIRL*WSGWWE Trigger: CTCCCACCAGCCACTCCACCATAATCTAATTCTGAT...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTTGGCTGTGTCTTAACTaGAAAAAGGAATTGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSWLCLN*KKELRG Trigger: GCCCCTCAATTCCTTTTTTCAGTTAAGACACAGCCA...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCGGCTTCAGGGAGGCCTaGCAGAAGCTTTCTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSGFREA*QKLSVL Trigger: CAAGACAGAAAGCTTCTGTCAGGCCTCCCTGAAGCC...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTCTGTTGCTTGTTAAATaGTGTCTGCCCCTCACTAGT | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSLLLVK*CLPLTS Trigger: ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAG...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTAGAATTAGATTATGGTaGAGTGGCTGGTGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSRIRLW*SGWWEW Trigger: CCACTCCCACCAGCCACTCCACCATAATCTAATTCT...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCTGGTGGAGTGGCTGGTaGGAGTGGCTCCCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: TRCLHAYGFECVISSVTVWWSGW*EWLPGV Trigger: AACTCCAGGGAGCCACTCCCACCAGCCACTCCACCA...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTGGTTATAGCTGTGGGTaGGGGGTGGGGTTCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SPYIIARFHLSFPISLPVGYSCG*GVGFKA Trigger: TGCCTTGAACCCCACCCCCCACCCACAGCTATAACC...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTGTGTTAAGAAGCGATTaGAATGGTCACATGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSVLRSD*NGHMAK Trigger: TTTGGCCATGTGACCATTCCAATCGCTTCTTAACAC...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTTCTGAGAAAAGACCTTaGCAGGCAGTTTTAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSSEKRP*QAVLKM Trigger: CATCTTTAAAACTGCCTGTCAAGGTCTTTTCTCAGA...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTGTATTGAGTCACCTATaGGAGACAGCCAAATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSVLSHL*ETAKFS Trigger: TGAAAATTTGGCTGTCTCCCATAGGTGACTCAATAC...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCAAAAACAAAGTCACTTaGCTGATCCACAACCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: ETGCWSVMLASSFCPSPPKNKVT*LIHNLN Trigger: ATTCAGGTTGTGGATCAGCCAAGTGACTTTGTTTTT...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTAATTTAAGTTTGCTTTaGACCCTGAGACAGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSNLSLL*TLRQDA Trigger: AGCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATT...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTCCCCAATTCCTGTCTTaGTTTTGTCCTTTCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSPQFLS*FCPFCH Trigger: ATGACAGAAAGGACAAAACCAAGACAGGAATTGGGG...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CAA 90 bp | GTTGGTGTCTTATGTAGCCCTGCCGTCCCGCTCATCTTCTGTTGCTaGTTAAATGCTGTCTGCCCCTCACTAGTATGGAGAATATTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VGVLCSPAVPLIFCC*LNAVCPSLVWRIFR Trigger: TCTAAATATTCTCCATACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCAGGGCTACATAAGACACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCTGTGTCAGCTTTGCTTaGTATCCTGCTGTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGACVSFA*YPAVLL Trigger: CAGCAGGACAGCAGGATAGCAAGCAAAGCTGACACA...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTAGAAGCTTTCTGTCTTaGCATGTTTTAGCTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSRSFLS*HVLAGE Trigger: TTCTCCAGCTAAAACATGGCAAGACAGAAAGCTTCT...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTGTGCTCTTGATCAAATaGAAATGTGCTTACAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSVLLIK*KCAYRD Trigger: ATCCCTGTAAGCACATTTGCATTTGATCAAGAGCAC...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTCCTTTCCAGATCAGATaGTGTATACTCTTTTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSPFQIR*CILFCY Trigger: ATAGCAAAAGAGTATACAGCATCTGATCTGGAAAGG...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTCTGGCTAATGAGCATTaGCTTCAGGGAGGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: SPYIIARFHLSFPISLPVLANEH*LQGGLT Trigger: TGTCAGGCCTCCCTGAAGCCAATGCTCATTAGCCAG...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTATGTCTTCATGCTTATaGCTTCGAATGTGTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: WYFLVSSSSELREHWTWSMSSCL*LRMCHF Trigger: GAAATGACACATTCGAAGCCATAAGCATGAAGACAT...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCCCGTTTGCCTTTGGATaGTTAAACTACAGAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSPFAFG*LNYRAL Trigger: GAGTGCTCTGTAGTTTAATCATCCAAAGGCAAACGG...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCCTTTGCTTGCTATCCTaGTGTCCTGCTGTCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TRCLHAYGFECVISSVTVLCLLS*CPAVLA Trigger: AGCCAGGACAGCAGGACAGCAGGATAGCAAGCAAAG...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTTATCTCATTGATTTTTaGCAAGCTCAAAATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSYLIDF*QAQNPG Trigger: CCCAGGATTTTGAGCTTGGCAAAAATCAATGAGATA...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTTGGTGGAGTGGCTGGTaGGAGTGGCTCCCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFWWSGW*EWLPGV Trigger: AACTCCAGGGAGCCACTCCCACCAGCCACTCCACCA...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCAATCAGAATTAGATTATaGTGGAGTGGCTGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ECVISSVTVTAGESHCASIRIRL*WSGWWE Trigger: CTCCCACCAGCCACTCCACCATAATCTAATTCTGAT...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCCTGGCTAATGAGCATTaGCTTCAGGGAGGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: TRCLHAYGFECVISSVTVLANEH*LQGGLT Trigger: TGTCAGGCCTCCCTGAAGCCAATGCTCATTAGCCAG...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTATGTCTTCATGCTTATaGCTTCGAATGTGTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSMSSCL*LRMCHF Trigger: GAAATGACACATTCGAAGCCATAAGCATGAAGACAT...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTGTGTGTTTACATAACTaGCTCAAGTTCCCAAGATTA | + |
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Preference number: 2 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSVCLHN*LKFPRL Trigger: TAATCTTGGGAACTTGAGCCAGTTATGTAAACACAC...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR TCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCTCTGATGTTGGTTTCTaGGAAAAGACCTTGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGASDVGF*EKTLTG Trigger: GCCTGTCAAGGTCTTTTCTCAGAAACCAACATCAGA...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTTATCTCAAAGAAAACCACACAACTATCAAGCATATGGGCCAAAAAGATCTTTGCTTGCTATCCTaGTGTCCTGCTGTCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: AAYLKENHTTIKHMGQKDLCLLS*CPAVLA Trigger: AGCCAGGACAGCAGGACAGCAGGATAGCAAGCAAAG...ATCTTTTTGGCCCATATGCTTGATAGTTGTGTGGTTTTCTTTGAGATAAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTTGGCTGTGTCTTAACTaGAAAAAGGAATTGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPYIIARFHLSFPISLPVWLCLN*KKELRG Trigger: GCCCCTCAATTCCTTTTTTCAGTTAAGACACAGCCA...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCCCTGACCATGGTGAATaGTATCAGATACTGTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSPDHGE*YQILFL Trigger: CAAAAACAGTATCTGATAGCATTCACCATGGTCAGG...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCCACAAGATGTCTTCATaGTTATGGCTTCGAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSHKMSS*LWLRMC Trigger: ACACATTCGAAGCCATAAGCATGAAGACATCTTGTG...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCTGGAGTCAGATGCAATaGAGGTTGTTTCCCTTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGAWSQMQ*RLFPLK Trigger: CTTTAAGGGAAACAACCTGCATTGCATCTGACTCCA...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCAAATTTAAGTTTGCTTTaGACCCTGAGACAGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: ECVISSVTVTAGESHCASNLSLL*TLRQDA Trigger: AGCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATT...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCTGCCCCTCACTAGTATaGAGAATATTTAGAAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGACPSLV*RIFRRA Trigger: AGCCCTTCTAAATATTCTCCATACTAGTGAGGGGCA...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 90 bp | CCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTCCCTAATTaGGGAGAAACTAAACATTGTAGAGTAGATCAGATTCTGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGFTCLSPLVFQFPN*GETKHCRVDQILQP Trigger: AGGCTGCAGAATCTGATCTACTCTACAATGTTTAGTTTCTCCCAAATTAGGGAACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 90 bp | CGAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATaGTGCCTCATGTTTCCCATAGCATTTCCGTATACTATTTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: RMCHFLCYCHSWRES*CLMFPIAFPYTIFR Trigger: CCTAAAAATAGTATACGGAAATGCTATGGGAAACATGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 90 bp | TTCTGTCATGGATTCACTCCTGATGTTATGACTGCCCCAGTGCTCTaGATCAAATGCAAATGTGCTTACAGGGATTTCCTGATTAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: FCHGFTPDVMTAPVL*IKCKCAYRDFLIKP Trigger: TGGTTTAATCAGGAAATCCCTGTAAGCACATTTGCATTTGATCAAGAGCACTGGGGCAGTCATAACATCAGGAGTGAATCCATGACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCGTGCTCTTGATCAAATaGAAATGTGCTTACAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGAVLLIK*KCAYRD Trigger: ATCCCTGTAAGCACATTTGCATTTGATCAAGAGCAC...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCAAGATGTCTATGGGTTaGTTAGATTCTGGGAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSKMSMG*LDSGNS Trigger: ACTATTCCCAGAATCTAACCAACCCATAGACATCTT...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCAAACCCGTTTGCCTTTaGATGATTAAACTACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGAKPVCL*MIKLQS Trigger: GCTCTGTAGTTTAATCATCCAAAGGCAAACGGGTTT...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCTTATCTCAAAGAAAACCACACAACTATCAAGCATATGGGCCAAAAAGATTCTGATGTTGGTTTCTaGGAAAAGACCTTGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: AAYLKENHTTIKHMGQKDSDVGF*EKTLTG Trigger: GCCTGTCAAGGTCTTTTCTCAGAAACCAACATCAGA...ATCTTTTTGGCCCATATGCTTGATAGTTGTGTGGTTTTCTTTGAGATAAGCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCTTGCCATGTTTTAGCTaGAGAATGCTAATTTCAATC | + |
|
Preference number: 2 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSLPCFS*RMLISI Trigger: GATTGAAATTAGCATTCTCCAGCTAAAACATGGCAA...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCAAAAACAAAGTCACTTaGCTGATCCACAACCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGAKNKVT*LIHNLN Trigger: ATTCAGGTTGTGGATCAGCCAAGTGACTTTGTTTTT...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTTATTTAGAAGGGCTCTaGAAGGGAGACTCCCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFYLEGL*KGDSQE Trigger: CTCTTGGGAGTCTCCCTTGCAGAGCCCTTCTAAATA...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCATTGGAATGGTCACATaGCCAAAGATAAAAACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HCNRWYRNQILVQHSMGAIGMVT*PKIKTK Trigger: CTTTGTTTTTATCTTTGGCCATGTGACCATTCCAAT...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTATTGGAATGGTCACATaGCCAAAGATAAAAACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPYIIARFHLSFPISLPVIGMVT*PKIKTK Trigger: CTTTGTTTTTATCTTTGGCCATGTGACCATTCCAAT...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCCAAGCTCAAAATCCTaGGCTCATTTGTCCACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFPSSKS*AHLSTL Trigger: AAGAGTGGACAAATGAGCCCAGGATTTTGAGCTTGG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 90 bp | TTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTaGAAACTGTGGACATTATATCTGCCACCGAATGAGAAACACATA | + |
|
Preference number: 2 (lower is better) Translates to: FQLTAQTVLVLLNTS*KLWTLYLPPNEKHI Trigger: TATGTGTTTCTCATTCGGTGGCAGATATAATGTCCACAGTTTCAAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTAATAGCAGCCCATTCTaGAACAAGACCCAGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFNSSPF*NKTQRK Trigger: TTTTCTCTGGGTCTTGTTGCAGAATGGGCTGCTATT...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCCCCAATTCCTGTCTTaGTTTTGTCCTTTCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFPQFLS*FCPFCH Trigger: ATGACAGAAAGGACAAAACCAAGACAGGAATTGGGG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCCTGACCATGGTGAATaGTATCAGATACTGTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFPDHGE*YQILFL Trigger: CAAAAACAGTATCTGATAGCATTCACCATGGTCAGG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCTGCAGCCTTGTAAGTaGAATTTAAGTTTGCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFLQPCK*NLSLLW Trigger: CCAAAGCAAACTTAAATTCCACTTACAAGGCTGCAG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTAAGATGTCTATGGGTTaGTTAGATTCTGGGAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFKMSMG*LDSGNS Trigger: ACTATTCCCAGAATCTAACCAACCCATAGACATCTT...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTAAGGCCATTTTTAAATaGTCTCAAGCTGTTCTCGTT | + |
|
Preference number: 2 (lower is better) Translates to: FHVPADSTNCLSTFEYFFKAIFK*SQAVLV Trigger: AACGAGAACAGCTTGAGACCATTTAAAAATGGCCTT...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCCAGAAGCTTTCTGTCTaGCCATGTTTTAGCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ETGCWSVMLASSFCPSPPQKLSV*PCFSWR Trigger: TCTCCAGCTAAAACATGGCAAGACAGAAAGCTTCTG...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTAGCTGGAGAGAGTCATaGTGCCTCATGTTTCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: WYFLVSSSSELREHWTWSSWRES*CLMFPI Trigger: TATGGGAAACATGAGGCACAATGACTCTCTCCAGCT...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | GTCTTATGTAGCCCTGCCGTCCCGCTCATCTTCTGTTaGTTGTTAAATGCTGTCTGCCCCTCACTAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: VLCSPAVPLIFC*LLNAVCPSLVW Trigger: CCATACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCAGGGCTACATAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTGAGAGAGTAGTAGTCTaGGTTGGTCTGATGTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WYFLVSSSSELREHWTWSERVVV*VGLMLV Trigger: AACCAACATCAGACCAACCAAGACTACTACTCTCTC...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTCCCCCAATTCCTGTCTaGGTTTTGTCCTTTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSPPIPV*VLSFLS Trigger: TGACAGAAAGGACAAAACCAAGACAGGAATTGGGGG...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTAATAATGTGTCAGCTTaGCTTGCTATCCTGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSNNVSA*LAILLS Trigger: GGACAGCAGGATAGCAAGCAAAGCTGACACATTATT...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR TCA 72 bp | CAAAACTGGCTAATGAGCATTGGCTTCAGGGAGGCCTaGCAGAAGCTTTCTGTCTTGCCATGTTTTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QNWLMSIGFREA*QKLSVLPCFSW Trigger: CCAGCTAAAACATGGCAAGACAGAAAGCTTCTGTCAGGCCTCCCTGAAGCCAATGCTCATTAGCCAGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTTTGGTTGGTCTGATGTaGGTTTCTGAGAAAAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSLVGLM*VSEKRP Trigger: AGGTCTTTTCTCAGAAACCAACATCAGACCAACCAA...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTATAGCCAGGTTTCACTaGTCTTTCCCCATTAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSIARFH*SFPISL Trigger: AAGACTAATGGGGAAAGACAAGTGAAACCTGGCTAT...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTATTCCTGTCTTGGTTTaGTCCTTTCTGTCATGGATT | + |
|
Preference number: 3 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSIPVLV*SFLSWI Trigger: AATCCATGACAGAAAGGACAAAACCAAGACAGGAAT...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | CCCAGATCAATAATGTGTCAGCTTTGCTTGCTATCCTaGTGTCCTGCTGTCCTGGCTGAAAATAATGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PRSIMCQLCLLS*CPAVLAENNGV Trigger: GACTCCATTATTTTCAGCCAGGACAGCAGGACAGCAGGATAGCAAGCAAAGCTGACACATTATTGATCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | GTGGAATTTAAGTTTGCTTTGGACCCTGAGACAGGATaGTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VEFKFALDPETG*WSVMLASSFCP Trigger: GGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | GAGTTGAGAGAGCACTGGACCTGGAGTCAGATGCAATaGAGGTTGTTTCCCTTAAAGATCCTTTCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: ELREHWTWSQMQ*RLFPLKILSRS Trigger: TGATCTGGAAAGGATCTTTAAGGGAAACAACCTGCATTGCATCTGACTCCAGGTCCAGTGCTCTCTCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CCA 72 bp | GAATTTAAGTTTGCTTTGGACCCTGAGACAGGATGCTaGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EFKFALDPETGC*SVMLASSFCPS Trigger: GCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCAAATAATGTGTCAGCTTaGCTTGCTATCCTGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ECVISSVTVTAGESHCASNNVSA*LAILLS Trigger: GGACAGCAGGATAGCAAGCAAAGCTGACACATTATT...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCCAGAAGCTTTCTGTCTaGCCATGTTTTAGCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSQKLSV*PCFSWR Trigger: TCTCCAGCTAAAACATGGCAAGACAGAAAGCTTCTG...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCAGAATTTAAGTTTGCTTaGGACCCTGAGACAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: ECVISSVTVTAGESHCASEFKFA*DPETGC Trigger: GCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATTC...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTTTCCAGTTCCCTAATTaGGGAGAAACTAAACATTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSFQFPN*GETKHC Trigger: ACAATGTTTAGTTTCTCCCAAATTAGGGAACTGGAA...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCCTCATCTTCTGTTGCTaGTTAAATGCTGTCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: HCNRWYRNQILVQHSMGALIFCC*LNAVCP Trigger: GGGGCAGACAGCATTTAACAAGCAACAGAAGATGAG...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCCCCGCTCATCTTCTGTaGCTTGTTAAATGCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HCNRWYRNQILVQHSMGAPAHLL*LVKCCL Trigger: CAGACAGCATTTAACAAGCAACAGAAGATGAGCGGG...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR TCA 72 bp | TTGCCTGGAGTGGAGAAAAACCCGTTTGCCTTTGGATaGTTAAACTACAGAGCACTCAACAACCAAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LPGVEKNPFAFG*LNYRALNNQAH Trigger: GTGTGCTTGGTTGTTGAGTGCTCTGTAGTTTAATCATCCAAAGGCAAACGGGTTTTTCTCCACTCCAGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | GTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTaGCCCTCACTAGTATGGAGAATATTTAGAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPLIFCCLLNAV*PSLVWRIFRRA Trigger: AGCCCTTCTAAATATTCTCCATACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CCA 72 bp | CTTCGAATGTGTCATTTCCTCTGTTACTGTCACAGCTaGAGAGAGTCATTGTGCCTCATGTTTCCCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRMCHFLCYCHS*RESLCLMFPIA Trigger: TGCTATGGGAAACATGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTCGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CCA 72 bp | TGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTATaGAGAATATTTAGAAGGGCTCTGCAAGGGAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: CCLLNAVCPSLV*RIFRRALQGRL Trigger: GAGTCTCCCTTGCAGAGCCCTTCTAAATATTCTCCATACTAGTGAGGGGCAGACAGCATTTAACAAGCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR TCA 72 bp | GTCTTGGTTTTGTCCTTTCTGTCATGGATTCACTCCTaGTGTTATGACTGCCCCAGTGCTCTTGATCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: VLVLSFLSWIHS*CYDCPSALDQM Trigger: CATTTGATCAAGAGCACTGGGGCAGTCATAACATCAGGAGTGAATCCATGACAGAAAGGACAAAACCAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | CCTGATGTTATGACTGCCCCAGTGCTCTTGATCAAATaGAAATGTGCTTACAGGGATTTCCTGATTAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: PDVMTAPVLLIK*KCAYRDFLIKP Trigger: TGGTTTAATCAGGAAATCCCTGTAAGCACATTTGCATTTGATCAAGAGCACTGGGGCAGTCATAACATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCGAATTTAAGTTTGCTTaGGACCCTGAGACAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: TRCLHAYGFECVISSVTVEFKFA*DPETGC Trigger: GCATCCTGTCTCAGGGTCCAAAGCAAACTTAAATTC...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR TCA 72 bp | GAGAGTAGTAGTCTTGGTTGGTCTGATGTTGGTTTCTaGGAAAAGACCTTGACAGGCAGTTTTAAAGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: ESSSLGWSDVGF*EKTLTGSFKDV Trigger: GACATCTTTAAAACTGCCTGTCAAGGTCTTTTCTCAGAAACCAACATCAGACCAACCAAGACTACTACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CCA 72 bp | TCAGAATCACCAAAGCACAAGATGTCTTCATGCTTATaGCTTCGAATGTGTCATTTCCTCTGTTACTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SESPKHKMSSCL*LRMCHFLCYCH Trigger: GTGACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGTGCTTTGGTGATTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCCTATTTTTAGGTCTCTaGTCACCCTACATTATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TRCLHAYGFECVISSVTVLFLGL*SPYIIA Trigger: GGCTATAATGTAGGGTGACAAGAGACCTAAAAATAG...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTAGCTGGAGAGAGTCATaGTGCCTCATGTTTCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: FHVPADSTNCLSTFEYFFSWRES*CLMFPI Trigger: TATGGGAAACATGAGGCACAATGACTCTCTCCAGCT...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR TCA 72 bp | TTGGTTGGTCTGATGTTGGTTTCTGAGAAAAGACCTTaGCAGGCAGTTTTAAAGATGTCTATGGGTTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LVGLMLVSEKRP*QAVLKMSMGWL Trigger: TAACCAACCCATAGACATCTTTAAAACTGCCTGTCAAGGTCTTTTCTCAGAAACCAACATCAGACCAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR TCA 72 bp | TCCTGGCTGAAAATAATGGAGTCTTTAAATCAGTATTaGGTCACCTATGGGAGACAGCCAAATTTTCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: SWLKIMESLNQY*VTYGRQPNFQP Trigger: GGGTTGAAAATTTGGCTGTCTCCCATAGGTGACTCAATACTGATTTAAAGACTCCATTATTTTCAGCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | AACTGTTCAGAATCACCAAAGCACAAGATGTCTTCATaGTTATGGCTTCGAATGTGTCATTTCCTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: NCSESPKHKMSS*LWLRMCHFLCY Trigger: GTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGTGCTTTGGTGATTCTGAACAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTTTGGTTGGTCTGATGTaGGTTTCTGAGAAAAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: FHVPADSTNCLSTFEYFFLVGLM*VSEKRP Trigger: AGGTCTTTTCTCAGAAACCAACATCAGACCAACCAA...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR GCA 72 bp | GAAAACGTGATAGAACACTCTCCTGACCATGGTGAATaGTATCAGATACTGTTTTTGTATATAGTGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: ENVIEHSPDHGE*YQILFLYIVRL Trigger: AAGTCTCACTATATACAAAAACAGTATCTGATAGCATTCACCATGGTCAGGAGAGTGTTCTATCACGTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CCA 72 bp | ACTGTCTTAGTACTTTTGAATACTTCTTTGAAACTGTaGACATTATATCTGCCACCGAATGAGAAACACATA | + |
|
Preference number: 3 (lower is better) Translates to: TVLVLLNTSLKL*TLYLPPNEKHI Trigger: TATGTGTTTCTCATTCGGTGGCAGATATAATGTCCACAGTTTCAAAGAAGTATTCAAAAGTACTAAGACAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCGGCACCATCATCACCTaGGCCTCCTCTTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETGCWSVMLASSFCPSPPGTIIT*ASSSAS Trigger: GGAAGCTGAAGAGGAGGCTCAGGTGATGATGGTGCC...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCCATCTCCATCTTGGATaGAGTACCGACCCGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETGCWSVMLASSFCPSPPHLHLG*STDPED Trigger: GTCCTCCGGGTCGGTACTTCATCCAAGATGGAGATG...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTCCTTTGCCCTTCAGCTaGCACTGTACAGGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WYFLVSSSSELREHWTWSPLPFS*HCTGTA Trigger: AGCAGTGCCTGTACAGTGCCAGCTGAAGGGCAAAGG...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTCAATCCGGTTCATCTTaGGGAGGATGCAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSQSGSS*GGCKAV Trigger: GACAGCCTTGCATCCTCCTCAAGATGAACCGGATTG...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR GCA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCATCCGCCACCAGGCACTaGCTGTTGACTGACCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ECVISSVTVTAGESHCASSATRH*LLTDPD Trigger: GTCAGGGTCAGTCAACAGGCAGTGCCTGGTGGCGGA...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCTCCGCCACCAGGCACTaGCTGTTGACTGACCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSSATRH*LLTDPD Trigger: GTCAGGGTCAGTCAACAGGCAGTGCCTGGTGGCGGA...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR GCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTATCTGTAAAATGCATTaGCACCAGCGGGGAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WYFLVSSSSELREHWTWSICKMH*HQRGGV Trigger: TACACCTCCCCGCTGGTGGCAATGCATTTTACAGAT...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCGGCACCATCATCACCTaGGCCTCCTCTTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCNRWYRNQILVQHSMGAGTIIT*ASSSAS Trigger: GGAAGCTGAAGAGGAGGCTCAGGTGATGATGGTGCC...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCAGGCGGGAGCCCTTCTaGAGCGGAGTTGCCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRCLHAYGFECVISSVTVRREPF*SGVAVS Trigger: TGAGACGGCAACTCCGCTCCAGAAGGGCTCCCGCCT...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 72 bp | TTATGTAGCCCTGCCGTCCCGCTCATCTTCTGTTGCTaGTTAAATGCTGTCTGCCCCTCACTAGTATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCSPAVPLIFCC*LNAVCPSLVWR Trigger: TCTCCATACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCAGGGCTACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: WYFLVSSSSELREHWTWSLKLRL*AKGLII Trigger: TATGATCAGACCCTTCGCTCATAGCCTTAACTTCAA...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTTTTTCATCACCTTTCTaGACTTTGCAGGACACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WYFLVSSSSELREHWTWSFSSPF*TLQDTF Trigger: GAAGGTGTCCTGCAAAGTTCAGAAAGGTGATGAAAA...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTTGTACAGGCACTGCTTaGTTCTTCACCACATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSCTGTA*FFTTSV Trigger: TACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACA...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | TGCCGTCCCGCTCATCTTCTGTTGCTTGTTAAATGCTGTCTGCCCCTCACTAGTTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: CRPAHLLLLVKCCLPLTSLKLRL*AKGLII Trigger: TATGATCAGACCCTTCGCTCATAGCCTTAACTTCAA...ACTAGTGAGGGGCAGACAGCATTTAACAAGCAACAGAAGATGAGCGGGACGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCCATCTCCATCTTGGATaGAGTACCGACCCGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRCLHAYGFECVISSVTVHLHLG*STDPED Trigger: GTCCTCCGGGTCGGTACTTCATCCAAGATGGAGATG...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTCAATCCGGTTCATCTTaGGGAGGATGCAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPYIIARFHLSFPISLPVQSGSS*GGCKAV Trigger: GACAGCCTTGCATCCTCCTCAAGATGAACCGGATTG...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR GCA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCGCACTGTACAGGCACTaGTTGGTTCTTCACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: HCNRWYRNQILVQHSMGAALYRH*LVLHHI Trigger: GATGTGGTGAAGAACCAAGCAGTGCCTGTACAGTGC...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 72 bp | AGAGAGCACTGGACCTGGAGTCAGATGCAATGCAGGTaGTTTCCCTTAAAGATCCTTTCCAGATCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: REHWTWSQMQCR*FPLKILSRSDA Trigger: AGCATCTGATCTGGAAAGGATCTTTAAGGGAAACAACCTGCATTGCATCTGACTCCAGGTCCAGTGCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| 3UTR CAA 72 bp | GGATTCACTCCTGATGTTATGACTGCCCCAGTGCTCTaGATCAAATGCAAATGTGCTTACAGGGATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFTPDVMTAPVL*IKCKCAYRDFL Trigger: CAGGAAATCCCTGTAAGCACATTTGCATTTGATCAAGAGCACTGGGGCAGTCATAACATCAGGAGTGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTATAAGACTCCGACTCTaGCCTGTTCGGGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FHVPADSTNCLSTFEYFFIRLRL*PVRARD Trigger: GTCTCTGGCCCGAACAGGTCAGAGTCGGAGTCTTAT...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016471.9 |
||
| CDS-3UTR GCA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTCACCTTTCTGAACTTTaGAGGACACCTTCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPYIIARFHLSFPISLPVHLSEL*RTPSQD Trigger: ATCCTGTGAAGGTGTCCTGCAAAGTTCAGAAAGGTG...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTATCTCAAAGAAAACCACACAACTATCAAGCATATGGGCCAAAAAGATGCACTGTACAGGCACTaGTTGGTTCTTCACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: AAYLKENHTTIKHMGQKDALYRH*LVLHHI Trigger: GATGTGGTGAAGAACCAAGCAGTGCCTGTACAGTGC...ATCTTTTTGGCCCATATGCTTGATAGTTGTGTGGTTTTCTTTGAGATAAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRCLHAYGFECVISSVTVKERLN*QAFLSS Trigger: TGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTT...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCCTTTGCCCTTCAGCTaGCACTGTACAGGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHVPADSTNCLSTFEYFFPLPFS*HCTGTA Trigger: AGCAGTGCCTGTACAGTGCCAGCTGAAGGGCAAAGG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCTGTACAGGCACTGCTTaGTTCTTCACCACATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRCLHAYGFECVISSVTVCTGTA*FFTTSV Trigger: TACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACA...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTAAGGAGCGCTTAAATTaGCAGGCCTTCTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHVPADSTNCLSTFEYFFKERLN*QAFLSS Trigger: TGAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTT...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CAA 72 bp | GTCCTGGCTGAAAATAATGGAGTCTTTAAATCAGTATaGAGTCACCTATGGGAGACAGCCAAATTTTCAACC | + |
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Preference number: 4 (lower is better) Translates to: VLAENNGVFKSV*SHLWETAKFST Trigger: GGTTGAAAATTTGGCTGTCTCCCATAGGTGACTCAATACTGATTTAAAGACTCCATTATTTTCAGCCAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR GCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCACCTTTCTGAACTTTaGAGGACACCTTCACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FHVPADSTNCLSTFEYFFHLSEL*RTPSQD Trigger: ATCCTGTGAAGGTGTCCTGCAAAGTTCAGAAAGGTG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR TCA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTTTTTCATCACCTTTCTaGACTTTGCAGGACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: FHVPADSTNCLSTFEYFFFSSPF*TLQDTF Trigger: GAAGGTGTCCTGCAAAGTTCAGAAAGGTGATGAAAA...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| 3UTR CAA 72 bp | ATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTaGAATACTTCTTTGAAACTGTGGACATTATATCTG | + |
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Preference number: 4 (lower is better) Translates to: MFQLTAQTVLVL*NTSLKLWTLYL Trigger: CAGATATAATGTCCACAGTTTCAAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | TGGTACTTCCTGGTAAGCAGCAGCTCTGAGTTGAGAGAGCACTGGACCTGGAGTACCAGGCACTGCCTGTaGACTGACCCTGACCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: WYFLVSSSSELREHWTWSTRHCL*TDPDLL Trigger: AAGAAGGTCAGGGTCAGTCAACAGGCAGTGCCTGGT...ACTCCAGGTCCAGTGCTCTCTCAACTCAGAGCTGCTGCTTACCAGGAAGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCGAAGGAGCGCTTAAATaGGCAGGCCTTCTTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ETGCWSVMLASSFCPSPPEGALK*AGLLVL Trigger: GAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTC...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | GAGACAGGATGCTGGTCTGTAATGCTTGCCTCCTCTTTTTGTCCCAGCCCTCCCCTGTACAGGCACTGCTaGGTTCTTCACCACATCTGT | + |
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Preference number: 5 (lower is better) Translates to: ETGCWSVMLASSFCPSPPLYRHC*VLHHIC Trigger: ACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACAG...GGGAGGGCTGGGACAAAAAGAGGAGGCAAGCATTACAGACCAGCATCCTGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS GCA 90 bp | CTGTACAGGCACTGCTTGGTTCTTCACCACATCTGTAAAATGCATTaGCACCAGCGGGGAGGTGTAGTTAACATGAGTCAGTTTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: LYRHCLVLHHICKMH*HQRGGVVNMSQFAI Trigger: TATGGCAAACTGACTCATGTTAACTACACCTCCCCGCTGGTGGCAATGCATTTTACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTACCAGGCACTGCCTGTaGACTGACCCTGACCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SPYIIARFHLSFPISLPVTRHCL*TDPDLL Trigger: AAGAAGGTCAGGGTCAGTCAACAGGCAGTGCCTGGT...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCATCTTCATCTCCATCTaGGATGAAGTACCGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSIFISI*DEVPTR Trigger: CCGGGTCGGTACTTCATCCAAGATGGAGATGAAGAT...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | CCCTTTCTCTCAACATCTCTAAGTACTTGTGCGATTCAGTCTCCTCATCCTTCCACAATCCGGTTCATCTaGAGGAGGATGCAAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PFLSTSLSTCAIQSPHPSTIRFI*RRMQGC Trigger: ACAGCCTTGCATCCTCCTCAAGATGAACCGGATTGT...GGAAGGATGAGGAGACTGAATCGCACAAGTACTTAGAGATGTTGAGAGAAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS TCA 90 bp | TGCCAAGTTTCAGGTTCAGAAACGTTGAAGTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATAACTCCAGGAGGTTTCACCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: CQVSGSETLKLKLRL*AKGLIITPGGFTCS Trigger: CGAGCAGGTGAAACCTCCTGGAGTTATGATCAGACCCTTCGCTCATAGCCTTAACTTCAACTTCAACGTTTCTGAACCTGAAACTTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | AAGCAGGTCCCACAATATCACTTCATACACACGTCAAAGGCAAGGAAAGATGATGAAGGAGCGCTTAAATaGGCAGGCCTTCTTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: KQVPQYHFIHTSKARKDDEGALK*AGLLVL Trigger: GAGGACAAGAAGGCCTGCCAATTTAAGCGCTCCTTC...ATCATCTTTCCTTGCCTTTGACGTGTGTATGAAGTGATATTGTGGGACCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | CATTGCAACAGATGGTATAGAAATCAAATCCTGGTACAGCACAGTATGGGAGCCCTGTACAGGCACTGCTaGGTTCTTCACCACATCTGT | + |
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Preference number: 5 (lower is better) Translates to: HCNRWYRNQILVQHSMGALYRHC*VLHHIC Trigger: ACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACAG...GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTACAATCCGGTTCATCTaGAGGAGGATGCAAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SPYIIARFHLSFPISLPVTIRFI*RRMQGC Trigger: ACAGCCTTGCATCCTCCTCAAGATGAACCGGATTGT...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS CCA 90 bp | AAACGATCATTGATGACATCATTTACGATGCCTTTGCCCTTCAGCTaGCACTGTACAGGCACTGCTTGGTTCTTCACCACATCTGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: KRSLMTSFTMPLPFS*HCTGTAWFFTTSVK Trigger: TTTTACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACAGTGCCAGCTGAAGGGCAAAGGCATCGTAAATGATGTCATCAATGATCGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | GAATGTGTCATTTCCTCTGTTACTGTCACAGCTGGAGAGAGTCATTGTGCCTCATCAGGTTCAGAAACGTaGAAGTTGAAGTTAAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: ECVISSVTVTAGESHCASSGSET*KLKLRL Trigger: TAGCCTTAACTTCAACTTCAACGTTTCTGAACCTGA...TGAGGCACAATGACTCTCTCCAGCTGTGACAGTAACAGAGGAAATGACACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | ACAAGATGTCTTCATGCTTATGGCTTCGAATGTGTCATTTCCTCTGTTACTGTCTCAGGTTCAGAAACGTaGAAGTTGAAGTTAAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: TRCLHAYGFECVISSVTVSGSET*KLKLRL Trigger: TAGCCTTAACTTCAACTTCAACGTTTCTGAACCTGA...GACAGTAACAGAGGAAATGACACATTCGAAGCCATAAGCATGAAGACATCTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | TCACCCTACATTATAGCCAGGTTTCACTTGTCTTTCCCCATTAGTCTTCCAGTTCCAACAAAACGATCATaGATGACATCATTTACGATG | + |
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Preference number: 5 (lower is better) Translates to: SPYIIARFHLSFPISLPVPTKRS*MTSFTM Trigger: CATCGTAAATGATGTCATCAATGATCGTTTTGTTGG...AACTGGAAGACTAATGGGGAAAGACAAGTGAAACCTGGCTATAATGTAGGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGTTCCAGCTGACAGCACAAACTGTCTTAGTACTTTTGAATACTTCTTTCCAACAAAACGATCATaGATGACATCATTTACGATG | + |
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Preference number: 5 (lower is better) Translates to: FHVPADSTNCLSTFEYFFPTKRS*MTSFTM Trigger: CATCGTAAATGATGTCATCAATGATCGTTTTGTTGG...AAAGAAGTATTCAAAAGTACTAAGACAGTTTGTGCTGTCAGCTGGAACATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS TCA 72 bp | CACGATCTGCAATTTCCGCCACCAGGCACTGCCTGTTaGCTGACCCTGACCTTCTTCTTCCTCCCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HDLQFPPPGTAC*LTLTFFFLPFF Trigger: GAAGAAAGGGAGGAAGAAGAAGGTCAGGGTCAGTCAACAGGCAGTGCCTGGTGGCGGAAATTGCAGATCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS CCA 72 bp | TTGATGACATCATTTACGATGCCTTTGCCCTTCAGCTaGCACTGTACAGGCACTGCTTGGTTCTTCACCACA | + |
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Preference number: 6 (lower is better) Translates to: LMTSFTMPLPFS*HCTGTAWFFTT Trigger: TGTGGTGAAGAACCAAGCAGTGCCTGTACAGTGCCAGCTGAAGGGCAAAGGCATCGTAAATGATGTCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS TCA 72 bp | TCAGGTTCAGAAACGTTGAAGTTGAAGTTAAGGCTATaGGCGAAGGGTCTGATCATAACTCCAGGAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SGSETLKLKLRL*AKGLIITPGGF Trigger: GAAACCTCCTGGAGTTATGATCAGACCCTTCGCTCATAGCCTTAACTTCAACTTCAACGTTTCTGAACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS TCA 72 bp | AGCGGAGGTCAAAAGAAGCGGACTCCGGGTAGTAATTaGTGGATCGAATGTCATTTTCATCACCTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SGGQKKRTPGSN*WIECHFHHLSE Trigger: TTCAGAAAGGTGATGAAAATGACATTCGATCCATCAATTACTACCCGGAGTCCGCTTCTTTTGACCTCCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS CAA 90 bp | GTTTCTATGTTCAGGGTAAAGATTATCCTCCCAACAAAACGATCATaGATGACATCATTTACGATGCCTTTGCCCTTCAGCTGGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: VSMFRVKIILPTKRS*MTSFTMPLPFSWHC Trigger: ACAGTGCCAGCTGAAGGGCAAAGGCATCGTAAATGATGTCATCAATGATCGTTTTGTTGGGAGGATAATCTTTACCCTGAACATAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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| CDS CAA 72 bp | TTCAGGGTAAAGATTATCCTCCCAACAAAACGATCATaGATGACATCATTTACGATGCCTTTGCCCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FRVKIILPTKRS*MTSFTMPLPFS Trigger: GCTGAAGGGCAAAGGCATCGTAAATGATGTCATCAATGATCGTTTTGTTGGGAGGATAATCTTTACCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016471.9 ENSMUST00000115134.2 |
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