Pregenerated sensors for ATP1B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041329Ensembl transcript IDs: ENSMUST00000047889.13, ENSMUST00000138694.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAGAGGGAAGGAGCCACTTGAGGGTGGGACGTGGGGGCTGCGGTaGAGAGGAGATTGGAAAGGATTAAAGAGAAGCAGAGAGACTAGA | + |
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Preference number: 1 (lower is better) Translates to: ERGKEPLEGGTWGLR*RGDWKGLKRSRETR Trigger: TCTAGTCTCTCTGCTTCTCTTTAATCCTTTCCAATCTCCTCTTCACCGCAGCCCCCACGTCCCACCCTCAAGTGGCTCCTTCCCTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR TCA 90 bp | GGATGTATCAGGAAGGACGGAAAAGGCCACAGAACCAACTTGTACTaGGCTACAAATGGCAGCTTTTCAGAGGGAGAGGGATCAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GCIRKDGKGHRTNLY*ATNGSFSEGEGSGR Trigger: TCTCCCTGATCCCTCTCCCTCTGAAAAGCTGCCATTTGTAGCTCAGTACAAGTTGGTTCTGTGGCCTTTTCCGTCCTTCCTGATACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR GCA 90 bp | GGAGATTGGAAAGGATTAAAGAGAAGCAGAGAGACTAGAGGAATATaGTGCTCTGATGGACGAAAACTTGGAGCAGGGGGCTCTTTCGCA | + |
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Preference number: 1 (lower is better) Translates to: GDWKGLKRSRETRGI*CSDGRKLGAGGSFA Trigger: TGCGAAAGAGCCCCCTGCTCCAAGTTTTCGTCCATCAGAGCAGCATATTCCTCTAGTCTCTCTGCTTCTCTTTAATCCTTTCCAATCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR TCA 90 bp | TGCTGGAGGAACCAGAAGTCAAAGCCACCAAGATACTGGCTATGGTaGCAGAAGTGTGAAGAGATGAAAGGAAAGTGGCTAGAACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: CWRNQKSKPPRYWLW*QKCEEMKGKWLEPC Trigger: ACAAGGTTCTAGCCACTTTCCTTTCATCTCTTCACACTTCTGTCACCATAGCCAGTATCTTGGTGGCTTTGACTTCTGGTTCCTCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CCA 90 bp | GAGAATTTTCTAGAAGAATTAAAGACTTCTCTTCCAGTCATCCTTTaGAGTCACAGTTGGGGGAGAAGCAGGATGTATCAGGAAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: ENFLEELKTSLPVIL*SHSWGRSRMYQEGR Trigger: CCGTCCTTCCTGATACATCCTGCTTCTCCCCCAACTGTGACTCCAAAGGATGACTGGAAGAGAAGTCTTTAATTCTTCTAGAAAATTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTCACCCCTGGGAAGCAAGTGGCTGAAACGGGTTCGAGGGATCTGTGGGTCCTCTGTCGCTGAGTaGCAACTCCGGTTCCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: QCSPLGSKWLKRVRGICGSSVAE*QLRFPN Trigger: GTTCGGGAACCGGAGTTGTCACTCAGCGACAGAGGA...CCCACAGATCCCTCGAACCCGTTTCAGCCACTTGCTTCCCAGGGGTGAACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGAAGGAGGTTCGAGGGATCTGTaGGGTAGAGGCTGGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PGYPKGRDTDPAGGKREGGSRDL*GRGWVD Trigger: ATCCACCCAGCCTCTACCCCACAGATCCCTCGAACC...TCCTTCCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGAGGGAAGGAGCCACTTGAGGGTGGGACGTGGGGGCTGCGGTGAAGAGCTTTGGAGTCACAGTTaGGGGAGAAGCAGGATGTAT | + |
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Preference number: 2 (lower is better) Translates to: RKEGRSHLRVGRGGCGEELWSHS*GRSRMY Trigger: ATACATCCTGCTTCTCCCCCAACTGTGACTCCAAAG...CTCTTCACCGCAGCCCCCACGTCCCACCCTCAAGTGGCTCCTTCCCTCTTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGACCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGCTGACGTTTCCAAGGTaGCTGCTGGGGATAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: EDLDTQREETQIQREERGLTFPR*LLGIEP Trigger: TGGCTCTATCCCCAGCAGCCACCTTGGAAACGTCAG...CCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CCA 90 bp | CCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGAAGGAAGAGGGCAGAACTGCTaGAGGAACCAGAAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PGYPKGRDTDPAGGKREGRGQNC*RNQKSK Trigger: CTTTGACTTCTGGTTCCTCCAGCAGTTCTGCCCTCT...TCCTTCCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGACCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGCCCCACAGAGCTCCCTaGGAAGGAGAATTTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: EDLDTQREETQIQREERGPHRAP*EGEFER Trigger: TCTTTCAAATTCTCCTTCCCAGGGAGCTCTGTGGGG...CCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAGAAGTCAAAGCCACCAAGATACTGGCTATGGTGACAGAAGTGTGAAGAAAATACCTTTGGGGTaGGTGAGGGAGGGATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GTRSQSHQDTGYGDRSVKKIPLG*VREGSG Trigger: GCCTGATCCCTCCCTCACCCACCCCAAAGGTATTTT...CTTCACACTTCTGTCACCATAGCCAGTATCTTGGTGGCTTTGACTTCTGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CAA 90 bp | AGAGAATTTTCTAGAAGAATTAAAGACTTCTCTTCCAGTCATCCTTaGGAGTCACAGTTGGGGGAGAAGCAGGATGTATCAGGAAGGACG | + |
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Preference number: 2 (lower is better) Translates to: REFSRRIKDFSSSHP*ESQLGEKQDVSGRT Trigger: CGTCCTTCCTGATACATCCTGCTTCTCCCCCAACTGTGACTCCAAAGGATGACTGGAAGAGAAGTCTTTAATTCTTCTAGAAAATTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTAGAAGAATTAAAGACTTCTCTTCCAGTCATCCTTTGGAGTCACAGTTGGTACTGAGCTACAAATaGCAGCTTTTCAGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FSRRIKDFSSSHPLESQLVLSYK*QLFRGR Trigger: TCTCCCTCTGAAAAGCTGCCATTTGTAGCTCAGTAC...CAACTGTGACTCCAAAGGATGACTGGAAGAGAAGTCTTTAATTCTTCTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR CCA 72 bp | GCTGAAACGGGTTCGAGGGATCTGTGGGGTAGAGGCTaGGTGGATGAGACCATTTCCTGTACCTCTAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: AETGSRDLWGRG*VDETISCTSKG Trigger: CCCCTTAGAGGTACAGGAAATGGTCTCATCCACCCAGCCTCTACCCCACAGATCCCTCGAACCCGTTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CCA 72 bp | GGGAAGCAAGTGGCTGAAACGGGTTCGAGGGATCTGTaGGGTAGAGGCTGGGTGGATGAGACCATTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GKQVAETGSRDL*GRGWVDETISC Trigger: ACAGGAAATGGTCTCATCCACCCAGCCTCTACCCCACAGATCCCTCGAACCCGTTTCAGCCACTTGCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CCA 72 bp | TTGAAGGAGGCGGAGCAAAGAAACTCAGAGCTGAGCTaGAGGAGGGTGTCTGACGCTTTCAGGCTGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: LKEAEQRNSELS*RRVSDAFRLAC Trigger: GCATGCCAGCCTGAAAGCGTCAGACACCCTCCTCCAGCTCAGCTCTGAGTTTCTTTGCTCCGCCTCCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CAA 90 bp | CCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGAAGGACTGATGGACGAAAACTaGGAGCAGGGGGCTCTTTCG | + |
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Preference number: 3 (lower is better) Translates to: PGYPKGRDTDPAGGKREGLMDEN*EQGALS Trigger: CGAAAGAGCCCCCTGCTCCAAGTTTTCGTCCATCAG...TCCTTCCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR CCA 72 bp | AAACGGGTTCGAGGGATCTGTGGGGTAGAGGCTGGGTaGATGAGACCATTTCCTGTACCTCTAAGGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: KRVRGICGVEAG*MRPFPVPLRGW Trigger: CCATCCCCTTAGAGGTACAGGAAATGGTCTCATCCACCCAGCCTCTACCCCACAGATCCCTCGAACCCGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CCA 72 bp | AAGGAAGAAGGACAGTGTTCACCCCTGGGAAGCAAGTaGCTGAAACGGGTTCGAGGGATCTGTGGGGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: KEEGQCSPLGSK*LKRVRGICGVE Trigger: CTCTACCCCACAGATCCCTCGAACCCGTTTCAGCCACTTGCTTCCCAGGGGTGAACACTGTCCTTCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR TCA 72 bp | AAACAAAGTGGATATTCAGAGCAGGTCAAGCCCGCCTaGGTAGGAGCCGTTTGGATGACAGGAGGGACCAGG | + |
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Preference number: 3 (lower is better) Translates to: KQSGYSEQVKPA*VGAVWMTGGTR Trigger: CCTGGTCCCTCCTGTCATCCAAACGGCTCCTACTCAGGCGGGCTTGACCTGCTCTGAATATCCACTTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR-3UTR CAA 90 bp | CAGTGTTCACCCCTGGGAAGCAAGTGGCTGAAACGGGTTCGAGGGATCTGTGGGCTGGCTAAGCTAAGGTaGGAAGATGTTGGAAATTGT | + |
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Preference number: 3 (lower is better) Translates to: QCSPLGSKWLKRVRGICGLAKLR*EDVGNC Trigger: ACAATTTCCAACATCTTCCAACCTTAGCTTAGCCAG...CCCACAGATCCCTCGAACCCGTTTCAGCCACTTGCTTCCCAGGGGTGAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR TCA 72 bp | AGGAAGGACGGAAAAGGCCACAGAACCAACTTGTACTaGGCTACAAATGGCAGCTTTTCAGAGGGAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RKDGKGHRTNLY*ATNGSFSEGEG Trigger: TCCCTCTCCCTCTGAAAAGCTGCCATTTGTAGCTCAGTACAAGTTGGTTCTGTGGCCTTTTCCGTCCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR GCA 72 bp | AAAGGATTAAAGAGAAGCAGAGAGACTAGAGGAATATaGTGCTCTGATGGACGAAAACTTGGAGCAGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: KGLKRSRETRGI*CSDGRKLGAGG Trigger: GCCCCCTGCTCCAAGTTTTCGTCCATCAGAGCAGCATATTCCTCTAGTCTCTCTGCTTCTCTTTAATCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR TCA 72 bp | AACCAGAAGTCAAAGCCACCAAGATACTGGCTATGGTaGCAGAAGTGTGAAGAGATGAAAGGAAAGTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: NQKSKPPRYWLW*QKCEEMKGKWL Trigger: TAGCCACTTTCCTTTCATCTCTTCACACTTCTGTCACCATAGCCAGTATCTTGGTGGCTTTGACTTCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CCA 72 bp | CTAGAAGAATTAAAGACTTCTCTTCCAGTCATCCTTTaGAGTCACAGTTGGGGGAGAAGCAGGATGTATCAG | + |
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Preference number: 3 (lower is better) Translates to: LEELKTSLPVIL*SHSWGRSRMYQ Trigger: CTGATACATCCTGCTTCTCCCCCAACTGTGACTCCAAAGGATGACTGGAAGAGAAGTCTTTAATTCTTCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGGCGGGTGTCCCGGTGCGCCCCATaGACTGGTGCGTCCGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: SGRVKDIPEASTGECGRVSRCAP*TGASAG Trigger: ACCCGCGGACGCACCAGTTCATGGGGCGCACCGGGA...CACCCGCCCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR TCA 90 bp | CTGTGGGGTAGAGGCTGGGTGGATGAGACCATTTCCTGTACCTCTAAGGGGATGGGTAGAAGAGGAGGATaGAGGCCCAGCTGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LWGRGWVDETISCTSKGMGRRGG*RPSWSR Trigger: CCGGGACCAGCTGGGCCTTCATCCTCCTCTTCTACC...CATCCCCTTAGAGGTACAGGAAATGGTCTCATCCACCCAGCCTCTACCCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | GGGAGGGATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGTCGATCCTGGTACTTaGGGGTATGGTCAGAGACGG | + |
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Preference number: 4 (lower is better) Translates to: GRDQAGSRTFQKHPQESVVDPGT*GYGQRR Trigger: CCGTCTCTGACCATACCCCCAAGTACCAGGATCGAC...CACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGATCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR GCA 90 bp | CCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGAAGGACACTCCTCAACCACCTaGCCGCAGCTCTTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGYPKGRDTDPAGGKREGHSSTT*PQLFFS Trigger: AGAGAAGAAGAGCTGCGGGCAGGTGGTTGAGGAGTG...TCCTTCCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR GCA 90 bp | ATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGGCGGGTGCTCTGGTTTGCCCCTaGATAGAAGTTGATGACCCG | + |
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Preference number: 4 (lower is better) Translates to: IRQGQGHSRSIHRRVWAGALVCP*IEVDDP Trigger: CGGGTCATCAACTTCTATGCAGGGGCAAACCAGAGC...ACCCGCCCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CCA 90 bp | CAGTGTTCACCCCTGGGAAGCAAGTGGCTGAAACGGGTTCGAGGGATCTGTGGGCATTCACCTCCACGTTaGGGGTCACATTCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: QCSPLGSKWLKRVRGICGHSPPR*GSHSGT Trigger: AGTTCCTGAATGTGACCCCCAACGTGGAGGTGAATG...CCCACAGATCCCTCGAACCCGTTTCAGCCACTTGCTTCCCAGGGGTGAACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR GCA 90 bp | AGGTTGGAAGATGTTGGAAATTGTGTGGGCATCAGGCTAGGTAGAGAAGTTGAGCGCCCCATGAACTGGTaGGTCCGCGGGTTCCACACG | + |
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Preference number: 4 (lower is better) Translates to: RLEDVGNCVGIRLGREVERPMNW*VRGFHT Trigger: CGTGTGGAACCCGCGGACGCACCAGTTCATGGGGCG...CTCAACTTCTCTACCTAGCCTGATGCCCACACAATTTCCAACATCTTCCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR GCA 90 bp | GAAGACCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGTGGTCAGAGACGGTCTaGAGCATTACCCACATGGTG | + |
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Preference number: 4 (lower is better) Translates to: EDLDTQREETQIQREERGWSETV*SITHMV Trigger: CACCATGTGGGTAATGCTGCAGACCGTCTCTGACCA...CCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | GGAGGGATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGCTGGCAGGCACGTTTTaGGTAGTTCAGAACCCCATT | + |
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Preference number: 4 (lower is better) Translates to: GGIRQGQGHSRSIHRRVWLAGTF*VVQNPI Trigger: AATGGGGTTCTGAACTACCCAAAACGTGCCTGCCAG...CCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGATCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | ATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGGCGGGTCAAGGTTCTCAGTCTTaGGTCGAATCATCAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IRQGQGHSRSIHRRVWAGQGSQS*VESSSL Trigger: CAGGCTTGATGATTCGACCCAAGACTGAGAACCTTG...ACCCGCCCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR CAA 72 bp | TTCAGAGCAGGTCAAGCCCGCCTGAGTAGGAGCCGTTaGGATGACAGGAGGGACCAGGAAGAAGTTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: FRAGQARLSRSR*DDRRDQEEVKS Trigger: ACTTTTAACTTCTTCCTGGTCCCTCCTGTCATCCAAACGGCTCCTACTCAGGCGGGCTTGACCTGCTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR TCA 90 bp | GGGAGGGATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGTCTTGCCAACACAAGTaGCATTCATGCTCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GRDQAGSRTFQKHPQESVSCQHK*HSCSGL Trigger: CAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGA...CACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGATCCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CCA 90 bp | AACCTTGTAAAAGGAAGAAGGACAGTGTTCACCCCTGGGAAGCAAGTGGCTGAAGAGCAATCGCCCAGTTaGGTCCGGTTGAACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NLVKGRRTVFTPGKQVAEEQSPS*VRLNWQ Trigger: CTGCCAGTTCAACCGGACCCAACTGGGCGATTGCTC...TTCAGCCACTTGCTTCCCAGGGGTGAACACTGTCCTTCTTCCTTTTACAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | GAAGACCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGGGGAACATGACAAAGTaGCCAAGGTTCTCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: EDLDTQREETQIQREERGGNMTK*PRFSAS Trigger: AGATGCTGAGAACCTTGGCCACTTTGTCATGTTCCC...CCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGGTCTTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGTAGAGGCTGGGTGGATGAGACCATTTCCTGTACCTCTAAGGGGATGCTCATAATATCGCCCTaGACGGCAGACATCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LWGRGWVDETISCTSKGMLIISP*TADIIL Trigger: AAGAATGATGTCTGCCGTCCAGGGCGATATTATGAG...CATCCCCTTAGAGGTACAGGAAATGGTCTCATCCACCCAGCCTCTACCCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | GATGAGACCATTTCCTGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGATGGTACTTGGGGGTATaGTCAGAGACGGTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DETISCTSKGMGVETETGWYLGV*SETVCS Trigger: GCTGCAGACCGTCTCTGACCATACCCCCAAGTACCA...TCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACAGGAAATGGTCTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CCA 90 bp | GATGAGACCATTTCCTGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGTGGCCAGTCGATCCTaGTACTTGGGGGTATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DETISCTSKGMGVETETGVASRS*YLGVWS Trigger: TGACCATACCCCCAAGTACCAGGATCGACTGGCCAC...TCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACAGGAAATGGTCTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR CAA 72 bp | ACTCCCGACTCCTCTCTGTCTCTGGCTAAGCTAAGGTaGGAAGATGTTGGAAATTGTGTGGGCATCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: TPDSSLSLAKLR*EDVGNCVGIRL Trigger: TAGCCTGATGCCCACACAATTTCCAACATCTTCCAACCTTAGCTTAGCCAGAGACAGAGAGGAGTCGGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTGGCTAAGCTAAGGTTGGAAGATGTTGGAAATTGTGTGGGCATCAGGCATTCACCTCCACGTTaGGGGTCACATTCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LSLAKLRLEDVGNCVGIRHSPPR*GSHSGT Trigger: AGTTCCTGAATGTGACCCCCAACGTGGAGGTGAATG...CCTGATGCCCACACAATTTCCAACATCTTCCAACCTTAGCTTAGCCAGAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| 3UTR CAA 72 bp | AAAGACTTCTCTTCCAGTCATCCTTTGGAGTCACAGTaGGGGGAGAAGCAGGATGTATCAGGAAGGACGGAA | + |
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Preference number: 4 (lower is better) Translates to: KDFSSSHPLESQ*GEKQDVSGRTE Trigger: TTCCGTCCTTCCTGATACATCCTGCTTCTCCCCCAACTGTGACTCCAAAGGATGACTGGAAGAGAAGTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR GCA 90 bp | GGGAGGGATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGTTACATGGAACTTTTTaGCATAGTAGGGAAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: GRDQAGSRTFQKHPQESVLHGTF*HSREST Trigger: TGTACTTTCCCTACTATGGCAAAAAGTTCCATGTAA...CACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGATCCCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR GCA 90 bp | ATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGGCGGGTTTACATGGAACTTTTTaGCATAGTAGGGAAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IRQGQGHSRSIHRRVWAGLHGTF*HSREST Trigger: TGTACTTTCCCTACTATGGCAAAAAGTTCCATGTAA...ACCCGCCCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CCA 90 bp | TGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAAGGGCATCTGGGAACATGACAAAGTaGCCAAGGTTCTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CTSKGMGVETETGAVRASGNMTK*PRFSAS Trigger: AGATGCTGAGAACCTTGGCCACTTTGTCATGTTCCC...AGATGCCCTTACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR TCA 90 bp | TGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAAGGGCATCTGTTCCAAGAACTTGTTaGGCTTCTGAACATGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CTSKGMGVETETGAVRASVPRTC*ASEHAD Trigger: GTCAGCATGTTCAGAAGCTCAACAAGTTCTTGGAAC...AGATGCCCTTACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTGGCTAAGCTAAGGTTGGAAGATGTTGGAAATTGTGTGGGCATCAGGTCTTGCCAACACAAGTaGCATTCATGCTCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAKLRLEDVGNCVGIRSCQHK*HSCSGL Trigger: CAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGA...CCTGATGCCCACACAATTTCCAACATCTTCCAACCTTAGCTTAGCCAGAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTGGCTAAGCTAAGGTTGGAAGATGTTGGAAATTGTGTGGGCATCAGGTCTTCTGTGCTTGGATaGAGTCGTTGTAAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLAKLRLEDVGNCVGIRSSVLG*SRCKVP Trigger: TGGAACCTTACAACGACTCCATCCAAGCACAGAAGA...CCTGATGCCCACACAATTTCCAACATCTTCCAACCTTAGCTTAGCCAGAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR GCA 90 bp | AACCTTGTAAAAGGAAGAAGGACAGTGTTCACCCCTGGGAAGCAAGTGGCTGAAGACATCATTCTTCTGTaGTTGGATGGAGTCGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLVKGRRTVFTPGKQVAEDIILL*LDGVVV Trigger: TACAACGACTCCATCCAAGCACAGAAGAATGATGTC...TTCAGCCACTTGCTTCCCAGGGGTGAACACTGTCCTTCTTCCTTTTACAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| 3UTR CAA 72 bp | TCTAGAAGAATTAAAGACTTCTCTTCCAGTCATCCTTaGGAGTCACAGTTGGGGGAGAAGCAGGATGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRIKDFSSSHP*ESQLGEKQDVS Trigger: TGATACATCCTGCTTCTCCCCCAACTGTGACTCCAAAGGATGACTGGAAGAGAAGTCTTTAATTCTTCTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS GCA 90 bp | AGGAGGATGAAGGCCCAGCTGGTCCCGGTGCGCCCCATGAACTGGTaGGTCCGCGGGTTCCACACGAACTCCTTCCACTCCTCAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RRMKAQLVPVRPMNW*VRGFHTNSFHSSTT Trigger: GGTGGTTGAGGAGTGGAAGGAGTTCGTGTGGAACCCGCGGACGCACCAGTTCATGGGGCGCACCGGGACCAGCTGGGCCTTCATCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CCA 90 bp | AAGAGGAGGATGAAGGCCCAGCTGGTCCCGGTGCGCCCCATGAACTaGTGCGTCCGCGGGTTCCACACGAACTCCTTCCACTCCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: KRRMKAQLVPVRPMN*CVRGFHTNSFHSST Trigger: GGTTGAGGAGTGGAAGGAGTTCGTGTGGAACCCGCGGACGCACCAGTTCATGGGGCGCACCGGGACCAGCTGGGCCTTCATCCTCCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAGGGAAGGAGCCACTTGAGGGTGGGACGTGGGGGCTGCGGTGAAGAGATCATTCTTCTGTGCTaGGATGGAGTCGTTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKEGRSHLRVGRGGCGEEIILLC*DGVVVR Trigger: CCTTACAACGACTCCATCCAAGCACAGAAGAATGAT...CTCTTCACCGCAGCCCCCACGTCCCACCCTCAAGTGGCTCCTTCCCTCTTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | GGAGGGATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGACTGGCAGGCACGTTTaGGGTAGTTCAGAACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGIRQGQGHSRSIHRRVWTGRHV*GSSEPH Trigger: ATGGGGTTCTGAACTACCCAAAACGTGCCTGCCAGT...CCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGATCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGACATTCACCTCCACGTaGGGGGTCACATTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRDQAGSRTFQKHPQESVTFTST*GVTFRN Trigger: GTTCCTGAATGTGACCCCCAACGTGGAGGTGAATGT...CACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGATCCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGAAAGAGGGAAGGAGCCACTTGAGGGTGGGACGTGGGGGCTGCGGTGAATCAGTGTCACTAATGTaGACAATGACATCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRKEGRSHLRVGRGGCGESVSLM*TMTSRF Trigger: GAACCTTGATGTCATTGTCAACATTAGTGACACTGA...TTCACCGCAGCCCCCACGTCCCACCCTCAAGTGGCTCCTTCCCTCTTTCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | TCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGGCGGGTGATGACCCGATTCATTTaGATGAAGACACAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRVKDIPEASTGECGRVMTRFI*MKTQGC Trigger: GCAGCCCTGTGTCTTCATCAAAATGAATCGGGTCAT...CACCCGCCCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS TCA 90 bp | CAGCGAACTTGTCCCGCTCATCGTCTGTGGCAATATTGGCAGCGTTaGTGCGGCATTCAACATTCACCTCCACGTTGGGGGTCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRTCPAHRLWQYWQR*CGIQHSPPRWGSHS Trigger: TGAATGTGACCCCCAACGTGGAGGTGAATGTTGAATGCCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACAAGTTCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CAA 90 bp | ATCAGGCAGGGTCAAGGACATTCCAGAAGCATCCACAGGAGAGTGTGGGCGGGTTCAAGGTTCTCAGTCTaGGGTCGAATCATCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IRQGQGHSRSIHRRVWAGSRFSV*GRIIKP Trigger: AGGCTTGATGATTCGACCCAAGACTGAGAACCTTGA...ACCCGCCCACACTCTCCTGTGGATGCTTCTGGAATGTCCTTGACCCTGCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | TGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAAGGGCATCTACACGGCCAGCGAACTaGTCCCGCTCATCGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CTSKGMGVETETGAVRASTRPAN*SRSSSV Trigger: CACAGACGATGAGCGGGACAAGTTCGCTGGCCGTGT...AGATGCCCTTACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS CCA 90 bp | AGAGCAATCGCCCAGTTGGGTCCGGTTGAACTGGCAGGCACGTTTTaGGTAGTTCAGAACCCCATTATCAGGTTGCTCATAATATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAIAQLGPVELAGTF*VVQNPIIRLLIISP Trigger: GGGCGATATTATGAGCAACCTGATAATGGGGTTCTGAACTACCCAAAACGTGCCTGCCAGTTCAACCGGACCCAACTGGGCGATTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | TGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAAGGGCATCTCCCAGTTGGGTCCGGTaGAACTGGCAGGCACGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CTSKGMGVETETGAVRASPSWVR*NWQARF Trigger: AAAACGTGCCTGCCAGTTCAACCGGACCCAACTGGG...AGATGCCCTTACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | AACCTTGTAAAAGGAAGAAGGACAGTGTTCACCCCTGGGAAGCAAGTGGCTGAAAGAGCAATCGCCCAGTaGGGTCCGGTTGAACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NLVKGRRTVFTPGKQVAERAIAQ*GPVELA Trigger: TGCCAGTTCAACCGGACCCAACTGGGCGATTGCTCT...TTCAGCCACTTGCTTCCCAGGGGTGAACACTGTCCTTCTTCCTTTTACAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | GAAGACCTGGATACCCAAAGGGAAGAGACACAGATCCAGCGGGAGGAAAGAGGGATGACCCGATTCATTTaGATGAAGACACAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EDLDTQREETQIQREERGMTRFI*MKTQGC Trigger: GCAGCCCTGTGTCTTCATCAAAATGAATCGGGTCAT...CCCTCTTTCCTCCCGCTGGATCTGTGTCTCTTCCCTTTGGGTATCCAGGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | ACCATTTCCTGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAACACGGCCAGCGAACTaGTCCCGCTCATCGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TISCTSKGMGVETETGAVTRPAN*SRSSSV Trigger: CACAGACGATGAGCGGGACAAGTTCGCTGGCCGTGT...TACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACAGGAAATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CAA 90 bp | TGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAAGGGCATCTAGTCGATCCTGGTACTaGGGGGTATGGTCAGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: CTSKGMGVETETGAVRASSRSWY*GVWSET Trigger: CGTCTCTGACCATACCCCCAAGTACCAGGATCGACT...AGATGCCCTTACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | GATGAGACCATTTCCTGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAACATTCACCTCCACGTaGGGGGTCACATTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DETISCTSKGMGVETETGTFTST*GVTFRN Trigger: GTTCCTGAATGTGACCCCCAACGTGGAGGTGAATGT...TCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACAGGAAATGGTCTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS-3UTR CAA 90 bp | AGGTTGGAAGATGTTGGAAATTGTGTGGGCATCAGGCTAGGTAGAGAAGTTGAGTCGTCTGTGGCAATATaGGCAGCGTTGATGCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLEDVGNCVGIRLGREVESSVAI*AALMRH Trigger: ATGCCGCATCAACGCTGCCAATATTGCCACAGACGA...CTCAACTTCTCTACCTAGCCTGATGCCCACACAATTTCCAACATCTTCCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS GCA 90 bp | GTGCTGTGGCCTCTTGCCAACACAAGTGACATTCATGCTCTGGTTTaGCCCTGCATAGAAGTTGATGACCCGATTCATTTTGATGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLWPLANTSDIHALV*PCIEVDDPIHFDED Trigger: GTCTTCATCAAAATGAATCGGGTCATCAACTTCTATGCAGGGGCAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGAGGCCACAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138694.2 |
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| CDS CCA 90 bp | TGGGTAGTTCAGAACCCCATTATCAGGTTGCTCATAATATCGCCCTaGACGGCAGACATCATTCTTCTGTGCTTGGATGGAGTCGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WVVQNPIIRLLIISP*TADIILLCLDGVVV Trigger: TACAACGACTCCATCCAAGCACAGAAGAATGATGTCTGCCGTCCAGGGCGATATTATGAGCAACCTGATAATGGGGTTCTGAACTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CCA 90 bp | AAGTACATCAGATCAATGCTGCCATTAGCAGGGAACATGACAAAGTaGCCAAGGTTCTCAGCATCTTCATCTCTCCCGTCCTTGGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: KYIRSMLPLAGNMTK*PRFSASSSLPSLGI Trigger: GATTCCCAAGGACGGGAGAGATGAAGATGCTGAGAACCTTGGCCACTTTGTCATGTTCCCTGCTAATGGCAGCATTGATCTGATGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138694.2 |
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| CDS GCA 90 bp | AGGTTGCTCATAATATCGCCCTGGACGGCAGACATCATTCTTCTGTaGTTGGATGGAGTCGTTGTAAGGTTCCAAGAACTTGTTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLLIISPWTADIILL*LDGVVVRFQELVEL Trigger: AAGCTCAACAAGTTCTTGGAACCTTACAACGACTCCATCCAAGCACAGAAGAATGATGTCTGCCGTCCAGGGCGATATTATGAGCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CCA 90 bp | AAGTACATCAGATCAATGCTGCCATTAGCAGGGAACATGACAAAGTaGCCAAGGTTCTCAGCATCTTCATCTCTCTTGCCAACACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KYIRSMLPLAGNMTK*PRFSASSSLLPTQV Trigger: CACTTGTGTTGGCAAGAGAGATGAAGATGCTGAGAACCTTGGCCACTTTGTCATGTTCCCTGCTAATGGCAGCATTGATCTGATGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS-3UTR CAA 90 bp | ACCATTTCCTGTACCTCTAAGGGGATGGGAGTAGAAACTGAAACAGGAGCTGTAGCATCTTCATCTCTCTaGCCAACACAAGTGACATTC | + |
|
Preference number: 5 (lower is better) Translates to: TISCTSKGMGVETETGAVASSSL*PTQVTF Trigger: GAATGTCACTTGTGTTGGCAAGAGAGATGAAGATGC...TACAGCTCCTGTTTCAGTTTCTACTCCCATCCCCTTAGAGGTACAGGAAATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS GCA 90 bp | ATCTTCATCTCTCTTGCCAACACAAGTGACATTCATGCTCTGGTTTaGCCCTGCATAGAAGTTGATGACCCGATTCATTTTGATGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IFISLANTSDIHALV*PCIEVDDPIHFDED Trigger: GTCTTCATCAAAATGAATCGGGTCATCAACTTCTATGCAGGGGCAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGAGAGATGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS GCA 72 bp | AAGGCCCAGCTGGTCCCGGTGCGCCCCATGAACTGGTaGGTCCGCGGGTTCCACACGAACTCCTTCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: KAQLVPVRPMNW*VRGFHTNSFHS Trigger: GGAGTGGAAGGAGTTCGTGTGGAACCCGCGGACGCACCAGTTCATGGGGCGCACCGGGACCAGCTGGGCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CCA 72 bp | ATGAAGGCCCAGCTGGTCCCGGTGCGCCCCATGAACTaGTGCGTCCGCGGGTTCCACACGAACTCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MKAQLVPVRPMN*CVRGFHTNSFH Trigger: GTGGAAGGAGTTCGTGTGGAACCCGCGGACGCACCAGTTCATGGGGCGCACCGGGACCAGCTGGGCCTTCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 72 bp | GTGGGTAGGGTCCCCAATGCCAGAGCAATCGCCCAGTaGGGTCCGGTTGAACTGGCAGGCACGTTTTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VGRVPNARAIAQ*GPVELAGTFWV Trigger: TACCCAAAACGTGCCTGCCAGTTCAACCGGACCCAACTGGGCGATTGCTCTGGCATTGGGGACCCTACCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 90 bp | GCCACACGGCCAGCGAACTTGTCCCGCTCATCGTCTGTGGCAATATaGGCAGCGTTGATGCGGCATTCAACATTCACCTCCACGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATRPANLSRSSSVAI*AALMRHSTFTSTLG Trigger: CCCCAACGTGGAGGTGAATGTTGAATGCCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACAAGTTCGCTGGCCGTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS CCA 72 bp | CCTGGTGTGGCCAGTCGATCCTGGTACTTGGGGGTATaGTCAGAGACGGTCTGCAGCATTACCCACATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGVASRSWYLGV*SETVCSITHMV Trigger: CACCATGTGGGTAATGCTGCAGACCGTCTCTGACCATACCCCCAAGTACCAGGATCGACTGGCCACACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CCA 72 bp | GGTCGAATCATCAAGCCTGGTGTGGCCAGTCGATCCTaGTACTTGGGGGTATGGTCAGAGACGGTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRIIKPGVASRS*YLGVWSETVCS Trigger: GCTGCAGACCGTCTCTGACCATACCCCCAAGTACCAGGATCGACTGGCCACACCAGGCTTGATGATTCGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CCA 72 bp | TCATCAAGCCTGGTGTGGCCAGTCGATCCTGGTACTTaGGGGTATGGTCAGAGACGGTCTGCAGCATTACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLVWPVDPGT*GYGQRRSAALP Trigger: GGGTAATGCTGCAGACCGTCTCTGACCATACCCCCAAGTACCAGGATCGACTGGCCACACCAGGCTTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 72 bp | TTGATCCGGAGTTTGAAGGCCACACGGCCAGCGAACTaGTCCCGCTCATCGTCTGTGGCAATATTGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LIRSLKATRPAN*SRSSSVAILAA Trigger: CGCTGCCAATATTGCCACAGACGATGAGCGGGACAAGTTCGCTGGCCGTGTGGCCTTCAAACTCCGGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS CAA 90 bp | TTGGGTCGAATCATCAAGCCTGGTGTGGCCAGTCGATCCTGGTACTaGGGGGTATGGTCAGAGACGGTCTGCAGCATTACCCACATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGRIIKPGVASRSWY*GVWSETVCSITHMV Trigger: CACCATGTGGGTAATGCTGCAGACCGTCTCTGACCATACCCCCAAGTACCAGGATCGACTGGCCACACCAGGCTTGATGATTCGACCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
||
| CDS CAA 90 bp | GTAACCATAGTGGGTAGGGTCCCCAATGCCAGAGCAATCGCCCAGTaGGGTCCGGTTGAACTGGCAGGCACGTTTTGGGTAGTTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VTIVGRVPNARAIAQ*GPVELAGTFWVVQN Trigger: GTTCTGAACTACCCAAAACGTGCCTGCCAGTTCAACCGGACCCAACTGGGCGATTGCTCTGGCATTGGGGACCCTACCCACTATGGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 90 bp | CAGGTTTTGTTGATCCGGAGTTTGAAGGCCACACGGCCAGCGAACTaGTCCCGCTCATCGTCTGTGGCAATATTGGCAGCGTTGATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVLLIRSLKATRPAN*SRSSSVAILAALMR Trigger: CCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACAAGTTCGCTGGCCGTGTGGCCTTCAAACTCCGGATCAACAAAACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
||
| CDS TCA 72 bp | TGTCCCGCTCATCGTCTGTGGCAATATTGGCAGCGTTaGTGCGGCATTCAACATTCACCTCCACGTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPAHRLWQYWQR*CGIQHSPPRWG Trigger: CCCCCAACGTGGAGGTGAATGTTGAATGCCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
||
| CDS CAA 72 bp | ATCATCAAGCCTGGTGTGGCCAGTCGATCCTGGTACTaGGGGGTATGGTCAGAGACGGTCTGCAGCATTACC | + |
|
Preference number: 6 (lower is better) Translates to: IIKPGVASRSWY*GVWSETVCSIT Trigger: GGTAATGCTGCAGACCGTCTCTGACCATACCCCCAAGTACCAGGATCGACTGGCCACACCAGGCTTGATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 90 bp | CCAGCGAACTTGTCCCGCTCATCGTCTGTGGCAATATTGGCAGCGTaGATGCGGCATTCAACATTCACCTCCACGTTGGGGGTCACATTC | + |
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Preference number: 6 (lower is better) Translates to: PANLSRSSSVAILAA*MRHSTFTSTLGVTF Trigger: GAATGTGACCCCCAACGTGGAGGTGAATGTTGAATGCCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACAAGTTCGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS CCA 72 bp | GGCCAAGGTTCTCAGCATCTTCATCTCTCCCGTCCTTaGGAATCAGTCTCCCCTTGTCCCTATAGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GQGSQHLHLSRP*ESVSPCPYSAV Trigger: CACAGCACTATAGGGACAAGGGGAGACTGATTCCCAAGGACGGGAGAGATGAAGATGCTGAGAACCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138694.2 |
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| CDS CAA 72 bp | TTGTCCCGCTCATCGTCTGTGGCAATATTGGCAGCGTaGATGCGGCATTCAACATTCACCTCCACGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LSRSSSVAILAA*MRHSTFTSTLG Trigger: CCCCAACGTGGAGGTGAATGTTGAATGCCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS CAA 72 bp | CCAGCGAACTTGTCCCGCTCATCGTCTGTGGCAATATaGGCAGCGTTGATGCGGCATTCAACATTCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: PANLSRSSSVAI*AALMRHSTFTS Trigger: GGAGGTGAATGTTGAATGCCGCATCAACGCTGCCAATATTGCCACAGACGATGAGCGGGACAAGTTCGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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| CDS CCA 72 bp | GCCCAGTTGGGTCCGGTTGAACTGGCAGGCACGTTTTaGGTAGTTCAGAACCCCATTATCAGGTTGCTCATA | + |
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Preference number: 6 (lower is better) Translates to: AQLGPVELAGTF*VVQNPIIRLLI Trigger: TATGAGCAACCTGATAATGGGGTTCTGAACTACCCAAAACGTGCCTGCCAGTTCAACCGGACCCAACTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 90 bp | GAACTGGCAGGCACGTTTTGGGTAGTTCAGAACCCCATTATCAGGTaGCTCATAATATCGCCCTGGACGGCAGACATCATTCTTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ELAGTFWVVQNPIIR*LIISPWTADIILLC Trigger: GCACAGAAGAATGATGTCTGCCGTCCAGGGCGATATTATGAGCAACCTGATAATGGGGTTCTGAACTACCCAAAACGTGCCTGCCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS TCA 72 bp | TGTCCCTATAGTGCTGTGGCCTCTTGCCAACACAAGTaGCATTCATGCTCTGGTTTGCCCCTGCATAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CPYSAVASCQHK*HSCSGLPLHRS Trigger: ACTTCTATGCAGGGGCAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGAGGCCACAGCACTATAGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138694.2 |
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| CDS CCA 72 bp | CAGAACCCCATTATCAGGTTGCTCATAATATCGCCCTaGACGGCAGACATCATTCTTCTGTGCTTGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: QNPIIRLLIISP*TADIILLCLDG Trigger: TCCATCCAAGCACAGAAGAATGATGTCTGCCGTCCAGGGCGATATTATGAGCAACCTGATAATGGGGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 72 bp | GGCACGTTTTGGGTAGTTCAGAACCCCATTATCAGGTaGCTCATAATATCGCCCTGGACGGCAGACATCATT | + |
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Preference number: 6 (lower is better) Translates to: GTFWVVQNPIIR*LIISPWTADII Trigger: AATGATGTCTGCCGTCCAGGGCGATATTATGAGCAACCTGATAATGGGGTTCTGAACTACCCAAAACGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 90 bp | TTGCTCATAATATCGCCCTGGACGGCAGACATCATTCTTCTGTGCTaGGATGGAGTCGTTGTAAGGTTCCAAGAACTTGTTGAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLIISPWTADIILLC*DGVVVRFQELVELL Trigger: CAGAAGCTCAACAAGTTCTTGGAACCTTACAACGACTCCATCCAAGCACAGAAGAATGATGTCTGCCGTCCAGGGCGATATTATGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS TCA 72 bp | GGTTCTCAGCATCTTCATCTCTCTTGCCAACACAAGTaGCATTCATGCTCTGGTTTGCCCCTGCATAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSQHLHLSCQHK*HSCSGLPLHRS Trigger: ACTTCTATGCAGGGGCAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGAGAGATGAAGATGCTGAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 72 bp | TCACTAATGTTGACAATGACATCAAGGTTCTCAGTCTaGGGTCGAATCATCAAGCCTGGTGTGGCCAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SLMLTMTSRFSV*GRIIKPGVASR Trigger: TCGACTGGCCACACCAGGCTTGATGATTCGACCCAAGACTGAGAACCTTGATGTCATTGTCAACATTAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS CAA 72 bp | ATATCGCCCTGGACGGCAGACATCATTCTTCTGTGCTaGGATGGAGTCGTTGTAAGGTTCCAAGAACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: ISPWTADIILLC*DGVVVRFQELV Trigger: AACAAGTTCTTGGAACCTTACAACGACTCCATCCAAGCACAGAAGAATGATGTCTGCCGTCCAGGGCGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS GCA 72 bp | ATAATATCGCCCTGGACGGCAGACATCATTCTTCTGTaGTTGGATGGAGTCGTTGTAAGGTTCCAAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: IISPWTADIILL*LDGVVVRFQEL Trigger: AAGTTCTTGGAACCTTACAACGACTCCATCCAAGCACAGAAGAATGATGTCTGCCGTCCAGGGCGATATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS GCA 72 bp | CCTCTTGCCAACACAAGTGACATTCATGCTCTGGTTTaGCCCTGCATAGAAGTTGATGACCCGATTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: PLANTSDIHALV*PCIEVDDPIHF Trigger: AAAATGAATCGGGTCATCAACTTCTATGCAGGGGCAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138694.2 |
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| CDS GCA 72 bp | TCTCTTGCCAACACAAGTGACATTCATGCTCTGGTTTaGCCCTGCATAGAAGTTGATGACCCGATTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: SLANTSDIHALV*PCIEVDDPIHF Trigger: AAAATGAATCGGGTCATCAACTTCTATGCAGGGGCAAACCAGAGCATGAATGTCACTTGTGTTGGCAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047889.13 |
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| CDS GCA 72 bp | CCACCAAAGGCTGAGTATAGTTTACATGGAACTTTTTaGCATAGTAGGGAAAGTACATCAGATCAATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PPKAEYSLHGTF*HSRESTSDQCC Trigger: GCAGCATTGATCTGATGTACTTTCCCTACTATGGCAAAAAGTTCCATGTAAACTATACTCAGCCTTTGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047889.13 ENSMUST00000138694.2 |
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