Pregenerated sensors for ATP1A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007107Ensembl transcript IDs: ENSMUST00000111243.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTCTCTCATTACAACAGGGGCCCCTaGTCAGCTCTATCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FHLLPETLPPAPGMCLSHYNRGP*SALSQV Trigger: CACCTGAGATAGAGCTGAGCAGGGGCCCCTGTTGTA...ATGAGAGAGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACCTATCTCAGGTGTCATaGTTATACTCAGTCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: FLQPQECVSLIQSQFNPYLSQVS*LYSVLA Trigger: AGCCAGGACTGAGTATAACAATGACACCTGAGATAG...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| 3UTR GCA 72 bp | ATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCTaGTCAGCTCTATCTCAGGTGTCATTGTTATACTCA | + |
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Preference number: 3 (lower is better) Translates to: IQSQFNPYNRGP*SALSQVSLLYS Trigger: TGAGTATAACAATGACACCTGAGATAGAGCTGAGCAGGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTTCAGGGCAGCGAGACTaGGGTTCTGACTCCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCSGQRD*GSDSPV Trigger: GACTGGGGAGTCAGAACCCCAGTCTCGCTGCCCTGA...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGCGAGACTGGGGTTCTaGCTCCCCAGTCAAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FSQPIPSPTRDSSSSPRNARLGF*LPSQGG Trigger: TCCTCCTTGACTGGGGAGTCAGAACCCCAGTCTCGC...ATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACGCGTCAGGCACACAGTaGCAGTGGCCAGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQECVSLIQSQFNPYASGTQ*QWPAAL Trigger: AAGGGCTGCTGGCCACTGTCACTGTGTGCCTGACGC...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATTCAGGTTGTCAAAGATaGGGCGGCCCTCCTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: FSQPIPSPTRDSSSSPRNSGCQR*GGPPPR Trigger: GCGTGGAGGAGGGCCGCCTCATCTTTGACAACCTGA...ATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCAGTTCTTGCGAGCCATaGGCTTGGCGGTCAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPSSCEP*AWRSAS Trigger: TGACGCTGACCGCCAAGCGCATGGCTCGCAAGAACT...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCTCCAGAGGGTTCTCATaGGTGCAATCAGGGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPSRGFS*VQSGQR Trigger: TCGCTGCCCTGATTGCACTCATGAGAACCCTCTGGA...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTGAGGGTTCTCATGAGTaGAATCAGGGCAGCGAGACT | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCEGSHE*NQGSET Trigger: AGTCTCGCTGCCCTGATTGCACTCATGAGAACCCTC...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTGGCCTCCTGGTAATATaGGAAGCAGCCGGTAATGAT | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCGLLVI*EAAGND Trigger: ATCATTACCGGCTGCTTCTCATATTACCAGGAGGCC...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCATGGGAACAGACTCCTaGTGGGGTTTAAAGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPMGTDS*WGLKSA Trigger: GGCCGACTTTAAACCCCATCAGGAGTCTGTTCCCAT...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTTGTTCCAAGCATTTATCTCTAGACAGGCTGCTGGATGTAACAAGACTGCCCGTCACCAGTCACTaGCACAATGGCTCCCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: EGCSKHLSLDRLLDVTRLPVTSH*HNGSQS Trigger: CGACTGGGAGCCATTGTGGCAGTGACTGGTGACGGG...CAGTCTTGTTACATCCAGCAGCCTGTCTAGAGATAAATGCTTGGAACAACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGTGGTTTGCTCCTCACTaGTGTCGGCCTCATACACAG | + |
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Preference number: 4 (lower is better) Translates to: APGMCLSHPESIQPIQQGWFAPH*CRPHTQ Trigger: CTGTGTATGAGGCCGACACCAGTGAGGAGCAAACCA...CCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | GAGGGTTGTTCCAAGCATTTATCTCTAGACAGGCTGCTGGATGTAACAAGACTGCTGGGTCTTGGTTTCTaGTTCAGCTCACCAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGCSKHLSLDRLLDVTRLLGLGF*FSSPGA Trigger: GGCCCCTGGTGAGCTGAATCAGAAACCAAGACCCAG...CAGTCTTGTTACATCCAGCAGCCTGTCTAGAGATAAATGCTTGGAACAACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAGAATTTGAGGAGAGCTaGCTCGGAAGCATCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SSSPRNVSLSSRVNSTHTEFEES*LGSIPC Trigger: ACAGGGGATGCTTCCGAGTCAGCTCTCCTCAAATTC...TGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACATGATGAGTTTCTGCTaGGGAGAGGTCCGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQECVSLIQSQFNPYMMSFC*GEVRAK Trigger: CTTTGCCCGGACCTCTCCTCAGCAGAAACTCATCAT...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | TCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACACAGTGCCCAGGTCGATaGAGAGAATGGTTATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSSPRNVSLSSRVNSTHTQCPGR*REWLWC Trigger: GCACCATAACCATTCTCTGCATCGACCTGGGCACTG...TGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTAGTCCACAGAGTACTTaGCACTCAGCTCATCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPSPTRDSSSSPRNVSSPQST*HSAHPT Trigger: CGTTGGATGAGCTGAGTGCCAAGTACTCTGTGGACT...AGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTGAATCTCCGCCACCTTaGGGTTTTTCTGCCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCESPPP*GFSASF Trigger: AAATGAGGCAGAAAAACCCCAAGGTGGCGGAGATTC...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCTGCAGAGAATGGTTATaGTGCCCAGAGGCAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPCREWL*CPEARV Trigger: TACCCTTGCCTCTGGGCACCATAACCATTCTCTGCA...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTGTTGTCTACAGAATTTaGCCCACTCTGGAGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QPIPSPTRDSSSSPRNVSVVYRI*PTLEWL Trigger: CAACCACTCCAGAGTGGGTCAAATTCTGTAGACAAC...AGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTGTAAAACCAGGTGTCTaGGGACTTGGGAAACGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCVKPGV*GLGKRF Trigger: AAAACGTTTCCCAAGTCCTCAGACACCTGGTTTTAC...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACTCCATAGGGTACTCCTaGCCATTCAGCAGGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: FLQPQECVSLIQSQFNPYSIGYS*PFSRKL Trigger: CAGTTTCCTGCTGAATGGGCAGGAGTACCCTATGGA...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | CCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCATGAGGTCAGCCCACTaGACAATCACGATACTGATG | + |
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Preference number: 4 (lower is better) Translates to: PGMCLSHPESIQPIQQGPMRSAH*TITILM Trigger: CATCAGTATCGTGATTGTGCAGTGGGCTGACCTCAT...GGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCTTGAGGACCTGGTGCTaGGTCTTGGTTTCTGATTCA | + |
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Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPLRTWC*VLVSDS Trigger: TGAATCAGAAACCAAGACCCAGCACCAGGTCCTCAA...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTATATCAGCAGGGATTTaGTCTCCTCCCTTCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: QPIPSPTRDSSSSPRNVSISAGI*SPPFTS Trigger: AGAGGTGAAGGGAGGAGACCAAATCCCTGCTGATAT...AGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCCCACGCCTGTCACAATaGAGGCAAAATTGTCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPPRLSQ*RQNCRQ Trigger: TTGACGACAATTTTGCCTCCATTGTGACAGGCGTGG...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCTCCAACGTTAGCTTGTaGTCATCCATAACCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: QECVSLIQSQFNPYNRGPSNVSL*SSITTS Trigger: GGAAGTGGTTATGGATGATCACAAGCTAACGTTGGA...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATAGGTGGATGGACATCTaGTACTTGTTGGTGGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: FSQPIPSPTRDSSSSPRNRWMDI*YLLVEL Trigger: TAACTCCACCAACAAGTATCAGATGTCCATCCACCT...ATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACATCTCCTTATAGGACTTaGGGATGTCGTCCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SSSPRNVSLSSRVNSTHTSPYRT*GCRPAV Trigger: AACAGCTGGACGACATCCTCAAGTCCTATAAGGAGA...TGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTGATGTCACTTTCAGGTaGTTCATAAGCCAGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: QPIPSPTRDSSSSPRNVSDVTFR*FISQGD Trigger: ATCTCCCTGGCTTATGAATCACCTGAAAGTGACATC...AGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCATCATAGACGAAGATaGGAACACTGTAGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: FHLLPETLPPAPGMCLSHHHRRR*EHCREV Trigger: CACTTCCCTACAGTGTTCTCATCTTCGTCTATGATG...ATGAGAGAGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTTTCAGTTCTGAGCCGTaGACTACAATGGCTTTAACA | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCFSSEP*TTMALT Trigger: TGTTAAAGCCATTGTAGTGCACGGCTCAGAACTGAA...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTTGTTCCAAGCATTTATCTCTAGACAGGCTGCTGGATGTAACAAGACTGGGTCGATGCAGAGAATaGTTATGGTGCCCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: EGCSKHLSLDRLLDVTRLGRCRE*LWCPEA Trigger: TGCCTCTGGGCACCATAACCATTCTCTGCATCGACC...CAGTCTTGTTACATCCAGCAGCCTGTCTAGAGATAAATGCTTGGAACAACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGGAAGCCTTTTCATaGTGTCACTTTCAGGTGATT | + |
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Preference number: 4 (lower is better) Translates to: FSQPIPSPTRDSSSSPRNVEAFS*CHFQVI Trigger: AATCACCTGAAAGTGACATCATGAAAAGGCTTCCAC...ATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACGGATCACAAAATAGGTaGAAAATCCAGCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLQPQECVSLIQSQFNPYGSQNR*KIQPEP Trigger: AGGCTCTGGCTGGATTTTTCACCTATTTTGTGATCC...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTTGTTCCAAGCATTTATCTCTAGACAGGCTGCTGGATGTAACAAGACTGAGAGAATGGTTATGGTaGCCAGAGGCAAGGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: EGCSKHLSLDRLLDVTRLREWLW*PEARVC Trigger: GCATACCCTTGCCTCTGGGCACCATAACCATTCTCT...CAGTCTTGTTACATCCAGCAGCCTGTCTAGAGATAAATGCTTGGAACAACCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTTGTTCCAAGCATTTATCTCTAGACAGGCTGCTGGATGTAACAAGACTGGAATTTGACCCACTCTaGAGTGGTTGGAGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: EGCSKHLSLDRLLDVTRLEFDPL*SGWRRS Trigger: ACTCCTCCTCCAACCACTCCAGAGTGGGTCAAATTC...CAGTCTTGTTACATCCAGCAGCCTGTCTAGAGATAAATGCTTGGAACAACCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | TCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACACTTCCAGAAGGTGGATaGACATCTGATACTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSPRNVSLSSRVNSTHTLPEGG*TSDTCW Trigger: CCAACAAGTATCAGATGTCCATCCACCTTCTGGAAG...TGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACACGTGTCGTTACCTTCTaGAATGATACCCACACTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSSPRNVSLSSRVNSTHTRVVTF*NDTHTF Trigger: AAAAGTGTGGGTATCATTTCAGAAGGTAACGACACG...TGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCGACTTGTTATTGACTTaGCTGATAGGGATATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGMCLSHPESIQPIQQGPDLLLT*LIGIFS Trigger: GCTGAATATCCCTATCAGTCAAGTCAATAACAAGTC...GGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTAATAATTTACATGTATaGCATAGGCCAGGAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PNLFHLLPETLPPAPGMCNNLHV*HRPGSR Trigger: TCTGCTTCCTGGCCTATGGCATACATGTAAATTATT...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | CCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCACAGCTGTGATCAAATaGATGAAGTGTTCGATTTCG | + |
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Preference number: 4 (lower is better) Translates to: PGMCLSHPESIQPIQQGPTAVIK*MKCSIS Trigger: CGAAATCGAACACTTCATCCATTTGATCACAGCTGT...GGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR GCA 90 bp | GCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGTTGTTTTTCATGCCCTaGTTGAAGAGTGAATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: APGMCLSHPESIQPIQQGLFFMP*LKSEFL Trigger: CAGAAATTCACTCTTCAAGCAGGGCATGAAAAACAA...CCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CCA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACACAGATTTTCCATaGGAAAATTTAACTCATCGG | + |
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Preference number: 4 (lower is better) Translates to: FLQPQECVSLIQSQFNPYNTDFP*ENLTHR Trigger: CCGATGAGTTAAATTTTCCCATGGAAAATCTGTGTT...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGTTGCGAGCCATGCGCTaGGCGGTCAGCGTCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: APGMCLSHPESIQPIQQGLRAMR*AVSVRH Trigger: GTGCCTGACGCTGACCGCCAAGCGCATGGCTCGCAA...CCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 90 bp | GAAGCATCCCCTGTTGTTGCCCGCTTAGCTATGGGAACAGACTCCTaGTGGGGTTTAAAGTCGGCCCGGTTACAGAGGCCAGCGATTCGA | + |
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Preference number: 5 (lower is better) Translates to: EASPVVARLAMGTDS*WGLKSARLQRPAIR Trigger: TCGAATCGCTGGCCTCTGTAACCGGGCCGACTTTAAACCCCATCAGGAGTCTGTTCCCATAGCTAAGCGGGCAACAACAGGGGATGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCGTTTTCCCCGTGGTTaGCTCCTCACTGGTGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: APGMCLSHPESIQPIQQGRFPRG*LLTGVG Trigger: GCCGACACCAGTGAGGAGCAAACCACGGGGAAAACG...CCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTCAGGTGTCTGAGGACTaGGGAAACGTTTTCCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: QPIPSPTRDSSSSPRNVSQVSED*GNVFPV Trigger: CACGGGGAAAACGTTTCCCAAGTCCTCAGACACCTG...AGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 90 bp | TTCGCTCACGGGGTTGTAAGACTGCTCAATGAATTTGAGGAGAGCTaGCTCGGAAGCATCCCCTGTTGTTGCCCGCTTAGCTATGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FAHGVVRLLNEFEES*LGSIPCCCPLSYGN Trigger: GTTCCCATAGCTAAGCGGGCAACAACAGGGGATGCTTCCGAGTCAGCTCTCCTCAAATTCATTGAGCAGTCTTACAACCCCGTGAGCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTCCCACTCTGGAGTGGTaGGAGGAGGAGTTAGTACAT | + |
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Preference number: 5 (lower is better) Translates to: QPIPSPTRDSSSSPRNVSPTLEW*EEELVH Trigger: ATGTACTAACTCCTCCTCCAACCACTCCAGAGTGGG...AGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGGATATCAGCAGGGATTaGGTCTCCTCCCTTCACCTC | + |
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Preference number: 5 (lower is better) Translates to: APGMCLSHPESIQPIQQGDISRD*VSSLHL Trigger: GAGGTGAAGGGAGGAGACCAAATCCCTGCTGATATC...CCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCGGAATCTCCGCCACCTaGGGGTTTTTCTGCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: PGMCLSHPESIQPIQQGPGISAT*GFFCLI Trigger: AATGAGGCAGAAAAACCCCAAGGTGGCGGAGATTCC...GGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CCA 90 bp | TGTCTGAGGACTTGGGAAACGTTTTCCCCGTGGTTTGCTCCTCACTaGTGTCGGCCTCATACACAGTCTTATCAAACCACAAATGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: CLRTWETFSPWFAPH*CRPHTQSYQTTNAP Trigger: TGGCGCATTTGTGGTTTGATAAGACTGTGTATGAGGCCGACACCAGTGAGGAGCAAACCACGGGGAAAACGTTTCCCAAGTCCTCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCGATGTCGTCCAGCTGTaGGGATTCCATGTCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PGMCLSHPESIQPIQQGPDVVQL*GFHVFQ Trigger: CTGAAAGACATGGAATCCCAACAGCTGGACGACATC...GGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 90 bp | TCCACAGTAGGAGGGAGAAGCCACCAAACAGTTGTCTACAGAATTTaGCCCACTCTGGAGTGGTTGGAGGAGGAGTTAGTACATTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: STVGGRSHQTVVYRI*PTLEWLEEELVHSV Trigger: GACCGAATGTACTAACTCCTCCTCCAACCACTCCAGAGTGGGTCAAATTCTGTAGACAACTGTTTGGTGGCTTCTCCCTCCTACTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACTCGAATCACCAGAGCTaGCTGAGGCACCATGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLQPQECVSLIQSQFNPYSNHQS*LRHHVL Trigger: AAGAACATGGTGCCTCAGCAAGCTCTGGTGATTCGA...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAGATGAAGAAGGCCGTTaGGCATGTGAATTCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: SSSPRNVSLSSRVNSTHTDEEGR*ACEFHH Trigger: GTGGTGGAATTCACATGCCAAACGGCCTTCTTCATC...TGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACGAATTTCTGCGTGTCTaGCAGATGATGAGGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: FLQPQECVSLIQSQFNPYEFLRV*QMMRSA Trigger: GGCTGACCTCATCATCTGCAAGACACGCAGAAATTC...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CCCAACCTATTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTTACATTCGGTCCATTTaGAAACAGAATATCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PNLFHLLPETLPPAPGMCYIRSI*KQNILG Trigger: GCCCAGGATATTCTGTTTCAAAATGGACCGAATGTA...ACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAATAGGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCAGCCCCAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACGACTGCTCAATGAATTaGAGGAGAGCTGACTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: FLQPQECVSLIQSQFNPYDCSMN*RRADSE Trigger: TTCCGAGTCAGCTCTCCTCAAATTCATTGAGCAGTC...GTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTGGGGCTGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCATGCCAATAAGACGGTaGTTCACAAGATTGTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: QECVSLIQSQFNPYNRGPMPIRR*FTRLSV Trigger: AACGGACAATCTTGTGAACAACCGTCTTATTGGCAT...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCTTTTTCATGCCCTGCTaGAAGAGTGAATTTCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: QECVSLIQSQFNPYNRGPFFMPC*KSEFLR Trigger: ACGCAGAAATTCACTCTTCAAGCAGGGCATGAAAAA...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | GAGGGTTGTTCCAAGCATTTATCTCTAGACAGGCTGCTGGATGTAACAAGACTGGAAGCCACCAAACAGTaGTCTACAGAATTTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: EGCSKHLSLDRLLDVTRLEATKQ*STEFDP Trigger: TGGGTCAAATTCTGTAGACAACTGTTTGGTGGCTTC...CAGTCTTGTTACATCCAGCAGCCTGTCTAGAGATAAATGCTTGGAACAACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | TTCCATCTCCTACCAGAGACTCTTCCTCCAGCCCCAGGAATGTGTCTCTCTCATATCTCTTACATTGATTaGCATTTTCTCTCCATCTCG | + |
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Preference number: 5 (lower is better) Translates to: FHLLPETLPPAPGMCLSHISYID*HFLSIS Trigger: CGAGATGGAGAGAAAATGCAAATCAATGTAAGAGAT...ATGAGAGAGACACATTCCTGGGGCTGGAGGAAGAGTCTCTGGTAGGAGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATGTGTCTCTCTCATCCAGAGTCAATTCAACCCATACAACAGGGGCCCCCCAAATATTAGGATTTaGTTTTTCATGCCCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: QECVSLIQSQFNPYNRGPPNIRI*FFMPCL Trigger: CAAGCAGGGCATGAAAAACAAAATCCTAATATTTGG...GGGGCCCCTGTTGTATGGGTTGAATTGACTCTGGATGAGAGAGACACATTCCTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CAA 72 bp | GTTACCATGATCACCTTGATCCCCGCGCTTCGACATTaGCTCACAGCGTCAGGCACGGCCGTCCGAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VTMITLIPALRH*LTASGTAVRGG Trigger: TCCTCCTCGGACGGCCGTGCCTGACGCTGTGAGCAAATGTCGAAGCGCGGGGATCAAGGTGATCATGGTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CCA 72 bp | ACCAGGTGTCTGAGGACTTGGGAAACGTTTTCCCCGTaGTTTGCTCCTCACTGGTGTCGGCCTCATACACAG | + |
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Preference number: 6 (lower is better) Translates to: TRCLRTWETFSP*FAPHWCRPHTQ Trigger: CTGTGTATGAGGCCGACACCAGTGAGGAGCAAACCACGGGGAAAACGTTTCCCAAGTCCTCAGACACCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 72 bp | CTCATGAGTGCAATCAGGGCAGCGAGACTGGGGTTCTaGCTCCCCAGTCAAGGAGGAATTGTCTACCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LMSAIRAARLGF*LPSQGGIVYLA Trigger: TGCAAGGTAGACAATTCCTCCTTGACTGGGGAGTCAGAACCCCAGTCTCGCTGCCCTGATTGCACTCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS GCA 72 bp | TGTTCGATTTCGGTGGCAATCGGGGTCTTGCCCATTTaGAAGCCTGATGTCAGGGAAGCAATCCGGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: CSISVAIGVLPI*KPDVREAIRPI Trigger: AATGGGCCGGATTGCTTCCCTGACATCAGGCTTGCAAATGGGCAAGACCCCGATTGCCACCGAAATCGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 72 bp | GGGGTTGTAAGACTGCTCAATGAATTTGAGGAGAGCTaGCTCGGAAGCATCCCCTGTTGTTGCCCGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: GVVRLLNEFEES*LGSIPCCCPLS Trigger: GCTAAGCGGGCAACAACAGGGGATGCTTCCGAGTCAGCTCTCCTCAAATTCATTGAGCAGTCTTACAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS GCA 72 bp | GTGTCTGAGGACTTGGGAAACGTTTTCCCCGTGGTTTaGTCCTCACTGGTGTCGGCCTCATACACAGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VSEDLGNVFPVV*SSLVSASYTVL Trigger: TAAGACTGTGTATGAGGCCGACACCAGTGAGGAGCAAACCACGGGGAAAACGTTTCCCAAGTCCTCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 72 bp | TTTGTAGTTGAGGACCTGGTGCTGGGTCTTGGTTTCTaGTTCAGCTCACCAGGGGCCTCTACCTCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FVVEDLVLGLGF*FSSPGASTSFS Trigger: AGAAAAGGAGGTAGAGGCCCCTGGTGAGCTGAATCAGAAACCAAGACCCAGCACCAGGTCCTCAACTACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CAA 72 bp | CTCCCCAGTCAAGGAGGAATTGTCTACCTTGCATCCTaGCGCCGAGATAACCCTGATATCAGCAGGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: LPSQGGIVYLAS*RRDNPDISRDL Trigger: CAAATCCCTGCTGATATCAGGGTTATCTCGGCGCAAGGATGCAAGGTAGACAATTCCTCCTTGACTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CCA 72 bp | ACTTGGGAAACGTTTTCCCCGTGGTTTGCTCCTCACTaGTGTCGGCCTCATACACAGTCTTATCAAACCACA | + |
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Preference number: 6 (lower is better) Translates to: TWETFSPWFAPH*CRPHTQSYQTT Trigger: TGTGGTTTGATAAGACTGTGTATGAGGCCGACACCAGTGAGGAGCAAACCACGGGGAAAACGTTTCCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CAA 72 bp | AACAGAATATCCTGGGCTTCTAGGATGCTAAGACCCTaGGTCAAGTCCACAGAGTACTTGGCACTCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NRISWASRMLRP*VKSTEYLALSS Trigger: TGAGCTGAGTGCCAAGTACTCTGTGGACTTGACCAAGGGTCTTAGCATCCTAGAAGCCCAGGATATTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS TCA 72 bp | TGCACTACAATGGCTTTAACAGACTTGTTATTGACTTaGCTGATAGGGATATTCAGCCGAGCGGCAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: CTTMALTDLLLT*LIGIFSRAAMS Trigger: GGACATTGCCGCTCGGCTGAATATCCCTATCAGTCAAGTCAATAACAAGTCTGTTAAAGCCATTGTAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS GCA 72 bp | AAGTCCATCTTCATTTCCTCATCCATAGGGTACTCCTaGCCATTCAGCAGGAAACTGGAGCAAAAATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KSIFISSSIGYS*PFSRKLEQKSK Trigger: CTTTGATTTTTGCTCCAGTTTCCTGCTGAATGGGCAGGAGTACCCTATGGATGAGGAAATGAAGATGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CAA 72 bp | AACTCATCGGTATTAAACTGGAACCCCTTAGAGAAATaGCTAGGCAAGTTCAAGAAGCAGAACCCCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: NSSVLNWNPLEK*LGKFKKQNPST Trigger: TGTGCTGGGGTTCTGCTTCTTGAACTTGCCTAGCAATTTCTCTAAGGGGTTCCAGTTTAATACCGATGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS CAA 72 bp | GTGCACTACAATGGCTTTAACAGACTTGTTATTGACTaGACTGATAGGGATATTCAGCCGAGCGGCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: VHYNGFNRLVID*TDRDIQPSGNV Trigger: GACATTGCCGCTCGGCTGAATATCCCTATCAGTCAAGTCAATAACAAGTCTGTTAAAGCCATTGTAGTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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| CDS GCA 72 bp | AGCTGTTGGGATTCCATGTCTTTCAGTTCTGAGCCGTaGACTACAATGGCTTTAACAGACTTGTTATTGACT | + |
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Preference number: 6 (lower is better) Translates to: SCWDSMSFSSEP*TTMALTDLLLT Trigger: AGTCAATAACAAGTCTGTTAAAGCCATTGTAGTGCACGGCTCAGAACTGAAAGACATGGAATCCCAACAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111243.2 |
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