Pregenerated sensors for ATP1A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033161Ensembl transcript IDs: ENSMUST00000036493.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTTGGTGCTTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTaGAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: ALVLSYQGRVPSSKT*STQRGGRGGCSVWH Trigger: GTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAAGCACCAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR GCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTaGTTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: ATCFIPGRLHPHMLW*FPTRVEFRAPRLEV Trigger: TACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR CCA 90 bp | ACAGCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTaGTGCTTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAA | + |
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Preference number: 1 (lower is better) Translates to: TATCFIPGRLHPHML*CFPTRVEFRAPRLE Trigger: TTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTaGAGTACACAAAGAGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SRTSASPHALVLSYQGRVPSSKT*STQRGG Trigger: ACCCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGG...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR GCA 72 bp | CCCCCGTTACAGCTACATGCTTCATTCCAGGACGTCTaGATCCCCACATGCTTTGGTGCTTTCCTACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: PPLQLHASFQDV*IPTCFGAFLPG Trigger: CCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGTAACGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR TCA 72 bp | CTTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTaGAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LSYQGRVPSSKT*STQRGGRGGCS Trigger: ACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR CCA 72 bp | TGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTaGTGCTTTCCTACCAGGGTAGAGTTCCGAGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: CFIPGRLHPHML*CFPTRVEFRAP Trigger: TGGAGCTCGGAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR GCA 72 bp | TTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTaGTTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: FIPGRLHPHMLW*FPTRVEFRAPR Trigger: TCTTGGAGCTCGGAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGTCCTGCCCATCACGGTaGGGTCCCCAGTGTACACGA | + |
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Preference number: 4 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWSCPSR*GPQCTR Trigger: TCGTGTACACTGGGGACCGCACCGTGATGGGCAGGA...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | CATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGCCACGATGGCGCCCTaGCGCTGGCAGCCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HSRTSASPHALVLSYQGRATMAP*RWQPST Trigger: TGTGGAGGGCTGCCAGCGGCAGGGCGCCATCGTGGC...TCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGACTGTCATCCGGTTCTaGGTCAGAGTTCCCGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWTVIRF*VRVPVL Trigger: CAAGACGGGAACTCTGACTCAGAACCGGATGACAGT...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGGCACTACCACAATACTaGCAAAGAACGCTGTATGGC | + |
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Preference number: 4 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWALPQY*QRTLYG Trigger: GCCATACAGCGTTCTTTGTCAGTATTGTGGTAGTGC...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTTCAGGCAGGAGGAGGTaGCAGAAACCTAGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRSGRRR*QKPSTR Trigger: ACGTGTGCTAGGTTTCTGCCACCTCCTCCTGCCTGA...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGTCGTCAGTGTCAAACTaGAAGCCTTCGGGAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWSSVSN*KPSGNC Trigger: ACAGTTTCCCGAAGGCTTCCAGTTTGACACTGACGA...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | CATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGATGTCCTCCACATCGTTaGCCCAGCGGTCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HSRTSASPHALVLSYQGRCPPHR*PSGHPR Trigger: CCTGGGATGACCGCTGGGTCAACGATGTGGAGGACA...TCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGGGGCTCAGATGCATTTaGGTTCTTGTGAATGGACAA | + |
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Preference number: 4 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWGLRCI*VLVNGQ Trigger: TTGTCCATTCACAAGAACCCAAATGCATCTGAGCCC...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTATCACAAGGGCTTGCTaGGGGACCATGTTCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRITRAC*GTMFLK Trigger: CTTCAAGAACATGGTCCCTCAGCAAGCCCTTGTGAT...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTAAGCCTCCAAAGAGCTaGCGGCAGAATTTCACCCAT | + |
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Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRKPPKS*RQNFTH Trigger: ATGGGTGAAATTCTGCCGGCAGCTCTTTGGAGGCTT...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCTCTTCATCCAGTGGCTaGTCCTTGCCGTGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFSSSSG*SLPWRR Trigger: CCTTCTCCACGGCAAGGAGCAGCCACTGGATGAAGA...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | ACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTACACAAAGAGGGGGTAGGGATACATCCTAAGGGCTaGCCCCATCCCGGGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: TRVEFRAPRLEVHKEGVGIHPKG*PHPGAV Trigger: TACTGCCCCGGGATGGGGGCAGCCCTTAGGATGTAT...CCCTACCCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCTCAGCAATGGGGGTCTaGCCACCTTCTAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLSAMGV*PPSSPE Trigger: CTCTGGGCTAGAAGGTGGCCAGACCCCCATTGCTGA...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCAGCTCTTCATCCAGTaGCTGCTCCTTGCCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SRTSASPHALVLSYQGRVQLFIQ*LLLAVE Trigger: CTCCACGGCAAGGAGCAGCCACTGGATGAAGAGCTG...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CCAAGACTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAGTTCACCTGGTTCACTaGAATGTTGAGGCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRLEVHKEGVGVGAVCGTVHLVH*NVEAGS Trigger: GCTGCCCGCCTCAACATTCCAGTGAACCAGGTGAAC...TGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAGTCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCGGACCACACAGGCCTTaGCATCTCTGGGGTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLGPHRP*HLWGSP Trigger: AGGTGAACCCCAGAGATGCCAAGGCCTGTGTGGTCC...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGACGTAGGCCAGGGAGATaGCAGGAACCATGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: HSRTSASPHALVLSYQGRRRPGR*QEPCQC Trigger: GCACTGACATGGTTCCTGCCATCTCCCTGGCCTACG...TCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | ACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCCGGATGCCCAACAGGTaGAAGGGCAGGAAACCGTTC | + |
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Preference number: 4 (lower is better) Translates to: TCFIPGRLHPHMLWCFPTRMPNR*KGRKPF Trigger: GAACGGTTTCCTGCCCTTTCACCTGTTGGGCATCCG...GGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCTTCTGGTCTTGCAGATaGCCAAGTCGGCCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLFWSCR*PSRPTA Trigger: TGCAGTGGGCCGACTTGGTCATCTGCAAGACCAGAA...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTGGAGAAGGATGGAGCTaGAGCGGTCCAGGATCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SRTSASPHALVLSYQGRVGEGWS*SGPGSF Trigger: AAAGGATCCTGGACCGCTGCAGCTCCATCCTTCTCC...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTTCCAGGCTGAGTTTATaGTCGTCCATAGACACTTCC | + |
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Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRSRLSL*SSIDTS Trigger: GGAAGTGTCTATGGACGACCATAAACTCAGCCTGGA...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | ACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCTCCGGGGACCGAGTCTaGGGTTCTGATTCACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TCFIPGRLHPHMLWCFPTSGDRV*GSDSPV Trigger: CACTGGTGAATCAGAACCCCAGACTCGGTCCCCGGA...GGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCACAGAGCGAACCAGGTaGCTGACGTCTTGTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFTERTR*LTSCQR Trigger: CCTTTGACAAGACGTCAGCCACCTGGTTCGCTCTGT...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCGCTGAGGAGAGGTCCTaGCAAAGACGATCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFAEERS*QRRSLC Trigger: ACACAGAGATCGTCTTTGCCAGGACCTCTCCTCAGC...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTACACAAAGAGGGGGTAGGGAAGCCTCCCAGGGCCTaGATCATACCGATCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TRVEFRAPRLEVHKEGVGKPPRA*IIPICP Trigger: TGGACAGATCGGTATGATCCAGGCCCTGGGAGGCTT...CCCTACCCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| 3UTR CAA 72 bp | ATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTaGGTGCTTTCCTACCAGGGTAGAGTTCCGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MLHSRTSASPHA*VLSYQGRVPSS Trigger: GGAGCTCGGAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | CCAAGACTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAGGATCAGAGAAAGGATaGAGAAAGACACCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PRLEVHKEGVGVGAVCGTGSEKG*RKTPPG Trigger: TCCTGGGGGTGTCTTTCTTCATCCTTTCTCTGATCC...TGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAGTCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCGGTTCACTGGAATGTTaGGGCGGGCAGCAATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLGSLEC*GGQQCL Trigger: AAGACATTGCTGCCCGCCTCAACATTCCAGTGAACC...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCCGCAGCAGACTTCAATaGACTTTAAGAGCGCCGACT | + |
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Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFRSRLQ*TLRAPT Trigger: AGTCGGCGCTCTTAAAGTGCATTGAAGTCTGCTGCG...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCACCAAGTCGGCCCACTaGACTACCACAATACTGACA | + |
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Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFTKSAH*TTTILT Trigger: TGTCAGTATTGTGGTAGTGCAGTGGGCCGACTTGGT...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTTTCGCTGTGATTGGATaGTCTCCTGTAACCATGATG | + |
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Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRFAVIG*SPVTMM Trigger: CATCATGGTTACAGGAGACCATCCAATCACAGCGAA...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CCAAGACTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACATCTCTGGGGTTCACCTaGTTCACTGGAATGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PRLEVHKEGVGVGAVCGTSLGFT*FTGMLR Trigger: CCTCAACATTCCAGTGAACCAGGTGAACCCCAGAGA...TGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAGTCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTTTTCCGGAATGTTACTaGTTAGGGTGTAAGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRFPECY*LGCKRW Trigger: CCATCGCTTACACCCTAACCAGTAACATTCCGGAAA...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCCAAGTTTGTCCGTTTTaGGGTTTCTGGGCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFQVCPF*GFWAAS Trigger: AGAGGCAGCCCAGAAACCCCAAAACGGACAAACTTG...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR GCA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGGATCTTGGAGCTTTTTaGTTCTTGATAATAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWDLGAF*FLIIGE Trigger: TTCTCCTATTATCAAGAAGCAAAAAGCTCCAAGATC...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CCA 90 bp | TACAGCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTAGGCCTTGGCATCTCTaGGGTTCACCTGGTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: YSYMLHSRTSASPHALVLRPWHL*GSPGSL Trigger: CAGTGAACCAGGTGAACCCCAGAGATGCCAAGGCCT...AAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | CTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCGTTCTGATTCACCAGTaGGTGAGGAGTTATCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LEVHKEGVGVGAVCGTMFVLIHQ*VRSYPP Trigger: AGGTGGATAACTCCTCACTCACTGGTGAATCAGAAC...GAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR TCA 90 bp | CATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAAGTCTCATTGCCTTCTaGGATAATGCCTACCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSRTSASPHALVLSYQGRSLIAF*DNAYPL Trigger: AAGGGGGTAGGCATTATCTCAGAAGGCAATGAGACT...TCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR GCA 90 bp | ACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCGTTAGCCTGAAACACTaGCCTGTTACAGAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCFIPGRLHPHMLWCFPTVSLKH*PVTETS Trigger: GCTGGTCTCTGTAACAGGGCAGTGTTTCAGGCTAAC...GGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR GCA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTTTGTTCTTCATTCCCTaGTGGAAGACAGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQRGGRGGCSVWHNVPRRLFFIP*WKTEFL Trigger: AAGGAATTCTGTCTTCCAGCAGGGAATGAAGAACAA...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGACACTCTGATTCTCCGTaGTGTCAGCTTCATGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSRTSASPHALVLSYQGRHSDSP*CQLHGS Trigger: AGATCCATGAAGCTGACACCACGGAGAATCAGAGTG...TCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | TACAGCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTAGAGACCAGCAATTCTaGACAGAGCGAACCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSYMLHSRTSASPHALVLRDQQF*TERTRW Trigger: CCACCTGGTTCGCTCTGTCCAGAATTGCTGGTCTCT...AAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCTCACTAGCAGGTGTTTaGGCTCAGATGCATTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLSLAGV*AQMHLG Trigger: ACCCAAATGCATCTGAGCCCAAACACCTGCTAGTGA...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGATTTTCTTGGTTAGCCTaGAACACTGCCCTGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: HSRTSASPHALVLSYQGRFSWLA*NTALLQ Trigger: CTGTAACAGGGCAGTGTTTCAGGCTAACCAAGAAAA...TCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTTATCCACGGGGAAATTaGCATCGTCAGTGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SRTSASPHALVLSYQGRVYPRGN*HRQCQT Trigger: AGTTTGACACTGACGATGTCAATTTCCCCGTGGATA...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTACACAAAGAGGGGGTAGGGCCTTCTTGGCCTTTTTaGCCTTTTTGTCACCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRVEFRAPRLEVHKEGVGPSWPF*PFCHHA Trigger: AGCATGGTGACAAAAAGGGCAAAAAGGCCAAGAAGG...CCCTACCCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCGTGTTTGGGCTCAGATaGATTTGGGTTCTTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFVFGLR*IWVLVN Trigger: ATTCACAAGAACCCAAATGCATCTGAGCCCAAACAC...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTGTACAGATCATCGTTTaGCGGTTCCTCTTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPVQIIV*RFLFCS Trigger: GCTACAGAAGAGGAACCGCCAAACGATGATCTGTAC...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | TACAGCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTCAATCTCTTCAGCAATaGGGGTCTGGCCACCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YSYMLHSRTSASPHALVLQSLQQ*GSGHLL Trigger: TAGAAGGTGGCCAGACCCCCATTGCTGAAGAGATTG...AAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCCCGGTGATGAGGTaGATGAAATGCTCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPTPVMR*MKCSIS Trigger: AGAGATTGAGCATTTCATCCACCTCATCACCGGGGT...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTGGCTTTCGCTGTGATTaGATGGTCTCCTGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPGFRCD*MVSCNH Trigger: ATGGTTACAGGAGACCATCCAATCACAGCGAAAGCC...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTTGTCAGCAGCTTGCTTaGACACATCAGAGCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPCQQLA*THQSQQ Trigger: TTGTTGGCTCTGATGTGTCCAAGCAAGCTGCTGACA...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCGACATCCTCCGCATTaGTGCTCATTTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TATCFIPGRLHPHMLWCFRHPPH*CSFSLH Trigger: ATGGAGAGAAAATGAGCATCAATGCGGAGGATGTCG...AAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR TCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTATATCAAGAAGGGGGTaGTTTCCGGAATGTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPISRRG*FPECYW Trigger: CCAGTAACATTCCGGAAATCACCCCCTTCTTGATAT...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | ACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCCGATCCACAGTAACATaGAAAAGCCTCCAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCFIPGRLHPHMLWCFPTRSTVT*KSLQRA Trigger: AGCTCTTTGGAGGCTTTTCCATGTTACTGTGGATCG...GGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTTGCCTTTTTCAAAGCTaGAGAGTCATTGACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRTSASPHALVLSYQGRVCLFQS*RVIDTI Trigger: GATGGTGTCAATGACTCTCCAGCTTTGAAAAAGGCA...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCAGTCCCCAGGGGCAGTaGAATGTTTGCAATAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLSPQGQ*NVCNNK Trigger: TTTATTATTGCAAACATTCCACTGCCCCTGGGGACT...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCTTCTTCATTCCCTGCTaGAAGACAGAATTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLFFIPC*KTEFLL Trigger: CAGAAGGAATTCTGTCTTCCAGCAGGGAATGAAGAA...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CCA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTTTGGGTTCTTGTGAATaGACAACTGGTACTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPLGSCE*TTGTCW Trigger: CCAACAAGTACCAGTTGTCCATTCACAAGAACCCAA...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTACACAAAGAGGGGCACCTTGCAGCCGTTTaGAGATATGATTCTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FPTRVEFRAPRLEVHKEGHLAAV*RYDSKI Trigger: GATCTTAGAATCATATCTGCAAACGGCTGCAAGGTG...CCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS GCA 90 bp | TGGGGGTCTGGCCACCTTCTAGCCCAGAGGCAAGCGTGGCAATCCTaGCCATCACGGTGCGGTCCCCAGTGTACACGACGATGCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGSGHLLAQRQAWQS*PSRCGPQCTRRCHV Trigger: CACGTGGCATCGTCGTGTACACTGGGGACCGCACCGTGATGGGCAGGATTGCCACGCTTGCCTCTGGGCTAGAAGGTGGCCAGACCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCCAGCGCTGCGGCATTaGCCCACAGCATCGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LEVHKEGVGVGAVCGTMFPALRH*PTASGT Trigger: TGTCCCCGATGCTGTGGGCAAATGCCGCAGCGCTGG...GAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGACTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACATGGACCACACAGGCCTaGGCATCTCTGGGGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PRLEVHKEGVGVGAVCGTWTTQA*ASLGFT Trigger: GGTGAACCCCAGAGATGCCAAGGCCTGTGTGGTCCA...TGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAGTCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS-3UTR CAA 90 bp | ACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGAATTCCTTCTGGTCTaGCAGATGACCAAGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRGGRGGCSVWHNVPRREFLLV*QMTKSA Trigger: GGCCGACTTGGTCATCTGCAAGACCAGAAGGAATTC...ACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCCACGGCGTGCAGGGCAGTGGCCAAATATCAAGATCTaGTTCTTCATTCCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGGCSVWHNVPRRAGQWPNIKI*FFIPCW Trigger: CCAGCAGGGAATGAAGAACAAGATCTTGATATTTGG...CCACTGCCCTGCACGCCGTGGAACATTGTGCCACACACTGCACCCACCCCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTACACAAAGAGGGGGCGGCAGGCTCATACTaGTCTCGTCCAACCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPTRVEFRAPRLEVHKEGAAGSY*SRPTPF Trigger: GAAGGGGGTTGGACGAGACAAGTATGAGCCTGCCGC...CCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTCTGGTTCACTGGAATGTaGAGGCGGGCAGCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRLHPHMLWCFPTRVEFWFTGM*RRAAMS Trigger: AGACATTGCTGCCCGCCTCAACATTCCAGTGAACCA...GAACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS CCA 90 bp | GATGACTACAGCAGAGAGCACCACCCCGAGGTACAGATCATCGTTTaGCGGTTCCTCTTCTGTAGCACTTCGGATGCCATAAGCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DDYSREHHPEVQIIV*RFLFCSTSDAISQE Trigger: TTCCTGGCTTATGGCATCCGAAGTGCTACAGAAGAGGAACCGCCAAACGATGATCTGTACCTCGGGGTGGTGCTCTCTGCTGTAGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTGATGTCGCTCTCAGCTaGCTCGTAGGCCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TATCFIPGRLHPHMLWCFDVALS*LVGQGD Trigger: ATCTCCCTGGCCTACGAGCAAGCTGAGAGCGACATC...AAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCACAAGTTTGTCCGTTTaGGGGTTTCTGGGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LEVHKEGVGVGAVCGTMFTSLSV*GFLGCL Trigger: GAGGCAGCCCAGAAACCCCAAAACGGACAAACTTGT...GAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTGAGGAGTTATCCACCTaGCAGCCGTTTGCAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: SRTSASPHALVLSYQGRVEELST*QPFADM Trigger: CATATCTGCAAACGGCTGCAAGGTGGATAACTCCTC...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTGCCTTTTTGCCCTTTTaGTCACCATGCTCCGATACA | + |
|
Preference number: 5 (lower is better) Translates to: SRTSASPHALVLSYQGRVAFLPF*SPCSDT Trigger: TGTATCGGAGCATGGTGACAAAAAGGGCAAAAAGGC...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTATGTCAGCAGCTTGCTaGGACACATCAGAGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPMSAAC*DTSEPT Trigger: TGTTGGCTCTGATGTGTCCAAGCAAGCTGCTGACAT...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | GCTACATGCTTCATTCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTTCCTTCTTGGCCTTTTaGCCCTTTTTGTCACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ATCFIPGRLHPHMLWCFPSFLAF*PFLSPC Trigger: GCATGGTGACAAAAAGGGCAAAAAGGCCAAGAAGGA...AGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGAATGAAGCATGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTACCAGGGTAGAGTTCCGAGCTCCAAGACTTGAAGTACACAAAGAGGGGAGACCTTCTGGCACGTaGGCTACGATGATACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FPTRVEFRAPRLEVHKEGRPSGT*ATMIPM Trigger: CATTGGTATCATCGTAGCCAACGTGCCAGAAGGTCT...CCCCTCTTTGTGTACTTCAAGTCTTGGAGCTCGGAACTCTACCCTGGTAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGCACGTATAAACCTTGCCCGCTGTCGTCCCCGTACACGGTGTTTCTCTTATCCACGGGGAAATaGACATCGTCAGTGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QKGTYKPCPLSSPYTVFLLSTGK*TSSVSN Trigger: GTTTGACACTGACGATGTCAATTTCCCCGTGGATAA...GAGAAACACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGACGTCTGCATCCCCACATGCTTTGGTGCTTTCCTACCAGGGTAGAGTTATATCCCTTTCCTTCTaGGCCTTTTTGCCCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRTSASPHALVLSYQGRVISLSF*AFLPFL Trigger: CAAAAAGGGCAAAAAGGCCAAGAAGGAAAGGGATAT...AACTCTACCCTGGTAGGAAAGCACCAAAGCATGTGGGGATGCAGACGTCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAAGTACACAAAGAGGGGGTAGGGGTGGGTGCAGTGTGTGGCACAATGTTCGGAGCTTTTTGCTTCTaGATAATAGGAGAAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LEVHKEGVGVGAVCGTMFGAFCF*IIGETA Trigger: GGCTGTTTCTCCTATTATCAAGAAGCAAAAAGCTCC...GAACATTGTGCCACACACTGCACCCACCCCTACCCCCTCTTTGTGTACTTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS GCA 72 bp | GCCCAGAGGCAAGCGTGGCAATCCTGCCCATCACGGTaGGGTCCCCAGTGTACACGACGATGCCACGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AQRQAWQSCPSR*GPQCTRRCHVR Trigger: CCGCACGTGGCATCGTCGTGTACACTGGGGACCGCACCGTGATGGGCAGGATTGCCACGCTTGCCTCTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS GCA 72 bp | TGCCCATCACGGTGCGGTCCCCAGTGTACACGACGATaGCACGTGCGGTTCCTTCCACACAGTTGGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPSRCGPQCTRR*HVRFLPHSWLR Trigger: TCTCAACCAACTGTGTGGAAGGAACCGCACGTGGCATCGTCGTGTACACTGGGGACCGCACCGTGATGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS CCA 72 bp | AAGGGGTTCTCGTTTGTGAAATCCGGGGACCGAGTCTaGGGTTCTGATTCACCAGTGAGTGAGGAGTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: KGFSFVKSGDRV*GSDSPVSEELS Trigger: GGATAACTCCTCACTCACTGGTGAATCAGAACCCCAGACTCGGTCCCCGGATTTCACAAACGAGAACCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS CAA 90 bp | AGAGGCATCTCCCGCTACTGCCCGCTTAAGAATAGGCAGGTTTTCTaGGTTAGCCTGAAACACTGCCCTGTTACAGAGACCAGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGISRYCPLKNRQVF*VSLKHCPVTETSNS Trigger: AGAATTGCTGGTCTCTGTAACAGGGCAGTGTTTCAGGCTAACCAAGAAAACCTGCCTATTCTTAAGCGGGCAGTAGCGGGAGATGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
||
| CDS CAA 72 bp | ATAAGACCCACGAAGCAGAGGTTATCCACGGGGAAATaGACATCGTCAGTGTCAAACTGGAAGCCTTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IRPTKQRLSTGK*TSSVSNWKPSG Trigger: TCCCGAAGGCTTCCAGTTTGACACTGACGATGTCAATTTCCCCGTGGATAACCTCTGCTTCGTGGGTCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS CAA 72 bp | TTGAGCTCATCCATATCCCTTTCCTTCTTGGCCTTTTaGCCCTTTTTGTCACCATGCTCCGATACAGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSSISLSFLAF*PFLSPCSDTAA Trigger: TGCCGCTGTATCGGAGCATGGTGACAAAAAGGGCAAAAAGGCCAAGAAGGAAAGGGATATGGATGAGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS CAA 72 bp | CCTTCATCACTAGCAGGTGTTTGGGCTCAGATGCATTaGGGTTCTTGTGAATGGACAACTGGTACTTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSLAGVWAQMH*GSCEWTTGTCW Trigger: CCAACAAGTACCAGTTGTCCATTCACAAGAACCCAAATGCATCTGAGCCCAAACACCTGCTAGTGATGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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| CDS CAA 72 bp | ACTTCCTTCTTGAGCTCATCCATATCCCTTTCCTTCTaGGCCTTTTTGCCCTTTTTGTCACCATGCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: TSFLSSSISLSF*AFLPFLSPCSD Trigger: ATCGGAGCATGGTGACAAAAAGGGCAAAAAGGCCAAGAAGGAAAGGGATATGGATGAGCTCAAGAAGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036493.8 |
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