Pregenerated sensors for ATP13A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022533Ensembl transcript IDs: ENSMUST00000061350.13, ENSMUST00000100013.9, ENSMUST00000229503.2, ENSMUST00000229616.2
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TTTGAATCTCAGGCTTGTTGGCGCCACACTCGCCCAAGCACTGTCTaGAGCATTCCCTTACAGCAGTTGGTGCTACAAGATAGAAACCGG | + |
Preference number: 1 (lower is better) Translates to: FESQACWRHTRPSTV*SIPLQQLVLQDRNR Trigger: CCGGTTTCTATCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGTGGCGCCAACAAGCCTGAGATTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 90 bp | ACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTGTaGAGGACTAGGGGCCTTTACTTATCATGCCTGGCTGCTCAGAAA | + |
Preference number: 1 (lower is better) Translates to: TIYSRTKQFSCLSLL*RTRGLYLSCLAAQK Trigger: TTTCTGAGCAGCCAGGCATGATAAGTAAAGGCCCCTAGTCCTGCACAGGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 90 bp | CTGAGACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTaGCTCAGCCTCCTGTGCAGGACTAGGGGCCTTTACTTATCATGC | + |
Preference number: 1 (lower is better) Translates to: LRQAFTIYSRTKQFS*LSLLCRTRGLYLSC Trigger: GCATGATAAGTAAAGGCCCCTAGTCCTGCACAGGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR TCA 90 bp | GTTCTTTGCTTAACTAGACTGCAGTATGGGAGCCATGGAATACTATaGAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTA | + |
Preference number: 1 (lower is better) Translates to: VLCLTRLQYGSHGIL*RISQTASSGAPYCL Trigger: TAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGTATTCCATGGCTCCCATACTGCAGTCTAGTTAAGCAAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CCA 90 bp | GCCACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTaGTGCTACAAGATAGAAACCGGTTACCATTATTTATTTATATGT | + |
Preference number: 1 (lower is better) Translates to: ATLAQALSAAFPYSS*CYKIETGYHYLFIC Trigger: ACATATAAATAAATAATGGTAACCGGTTTCTATCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 90 bp | TACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTaGATTCACAGACATTCTTCGAACAATATTCTCAACTGGAATAAC | + |
Preference number: 1 (lower is better) Translates to: YRRLSLPMALSRTHV*IHRHSSNNILNWNN Trigger: GTTATTCCAGTTGAGAATATTGTTCGAAGAATGTCTGTGAATGCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTaGTACAAGATAGAAACCGGTTACCATTATTTATTTATATGTAAG | + |
Preference number: 1 (lower is better) Translates to: TLAQALSAAFPYSSW*YKIETGYHYLFICK Trigger: CTTACATATAAATAAATAATGGTAACCGGTTTCTATCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 90 bp | CTTCGTACAAATGCTTTCTCTCACCTACATAAAACCTTGTTCCTTTaGAAACAATATGGACAGATGAGATATAAACCCTTATCAACTCTA | + |
Preference number: 1 (lower is better) Translates to: LRTNAFSHLHKTLFL*KQYGQMRYKPLSTL Trigger: TAGAGTTGATAAGGGTTTATATCTCATCTGTCCATATTGTTTGCAAAGGAACAAGGTTTTATGTAGGTGAGAGAAAGCATTTGTACGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCAAATCCGCCTGCCCCTaGCTCCCTCCCGAATGCTGG | + |
Preference number: 2 (lower is better) Translates to: DRLLLSIPGLNNSPASASKSACP*LPPECW Trigger: CCAGCATTCGGGAGGGAGGCAGGGGCAGGCGGATTT...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAGAAAAGCTCAACAGTaGATGCTGCTGAGCACTGCT | + |
Preference number: 2 (lower is better) Translates to: TLAQALSAAFPYSSWCYKRKAQQ*MLLSTA Trigger: AGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCT...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGGAGAGGGATATAAACTaGACTAGTGCCATTCTGACA | + |
Preference number: 2 (lower is better) Translates to: TLAQALSAAFPYSSWCYKERDIN*TSAILT Trigger: TGTCAGAATGGCACTAGTTCAGTTTATATCCCTCTC...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCAGAAAAGCTCAACAGTaGATGCTGCTGAGCACTGCT | + |
Preference number: 2 (lower is better) Translates to: MTYRRLSLPMALSRTHVCRKAQQ*MLLSTA Trigger: AGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCT...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCACCCCGATCCTTCTCTaGTTGTGTATTCTGAGACAG | + |
Preference number: 2 (lower is better) Translates to: MTYRRLSLPMALSRTHVCTPILL*LCILRQ Trigger: CTGTCTCAGAATACACAAGCAGAGAAGGATCGGGGT...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGGAAATGGAAATTACCTaGGTTGCTCTATCAACAACA | + |
Preference number: 2 (lower is better) Translates to: TLAQALSAAFPYSSWCYKEMEIT*VALSTT Trigger: TGTTGTTGATAGAGCAACTCAGGTAATTTCCATTTC...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAGAAATGGAAATTACCTaGGTTGCTCTATCAACAACA | + |
Preference number: 2 (lower is better) Translates to: HSPKHCLQHSLTAVGATREMEIT*VALSTT Trigger: TGTTGTTGATAGAGCAACTCAGGTAATTTCCATTTC...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAGATGTTAAGTACAACTaGTATTGGGTTTCTAAGCTG | + |
Preference number: 2 (lower is better) Translates to: HSPKHCLQHSLTAVGATRDVKYN*YWVSKL Trigger: CAGCTTAGAAACCCAATATCAGTTGTACTTAACATC...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGACTAAACAATTCTCCTaGCTCAGCCTCCTGTGCAGG | + |
Preference number: 2 (lower is better) Translates to: QLKRSKMHSFIESFTGQLTKQFS*LSLLCR Trigger: CCTGCACAGGAGGCTGAGGCAGGAGAATTGTTTAGT...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGATCAACCTATTTTCACTaGAGGCTAATCACAATTAAC | + |
Preference number: 2 (lower is better) Translates to: HSPKHCLQHSLTAVGATRSTYFH*RLITIN Trigger: GTTAATTGTGATTAGCCTCCAGTGAAAATAGGTTGA...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGTTACTGTCTAGAAAGTaGCACCCAGGCAGGAGATAC | + |
Preference number: 2 (lower is better) Translates to: QLKRSKMHSFIESFTGQLLLSRK*HPGRRY Trigger: GTATCTCCTGCCTGGGTGTCACTTTCTAGACAGTAA...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CAA 90 bp | GAATGGGATCTACTGCCAAGAGACATAACCCCGATCCTTCTCTGCTaGTGTATTCTGAGACAGGCTTTTACTATCTATTCCAGGACTAAA | + |
Preference number: 2 (lower is better) Translates to: EWDLLPRDITPILLC*CILRQAFTIYSRTK Trigger: TTTAGTCCTGGAATAGATAGTAAAAGCCTGTCTCAGAATACACAAGCAGAGAAGGATCGGGGTTATGTCTCTTGGCAGTAGATCCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCTTTGGGAGAAAACACTaGATCAAAACAGGCTTTCAA | + |
Preference number: 2 (lower is better) Translates to: MTYRRLSLPMALSRTHVCFGRKH*IKTGFQ Trigger: TTGAAAGCCTGTTTTGATCCAGTGTTTTCTCCCAAA...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACTTACTGTCTAGAAAGTaGCACCCAGGCAGGAGATAC | + |
Preference number: 2 (lower is better) Translates to: SLVATAVIVILRHIYFFYLLSRK*HPGRRY Trigger: GTATCTCCTGCCTGGGTGTCACTTTCTAGACAGTAA...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTTTGGGAGAAAACACTaGATCAAAACAGGCTTTCAA | + |
Preference number: 2 (lower is better) Translates to: DRLLLSIPGLNNSPASASFGRKH*IKTGFQ Trigger: TTGAAAGCCTGTTTTGATCCAGTGTTTTCTCCCAAA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CAA 90 bp | TGCCAAACTGCCAGGTCCTACCTAGGAAAGCATTGTGAAAGTTCCTaGAGAACTGAACAGAATCAGATAAAACACAAATGTGTAAATGCT | + |
Preference number: 2 (lower is better) Translates to: CQTARSYLGKHCESS*RTEQNQIKHKCVNA Trigger: AGCATTTACACATTTGTGTTTTATCTGATTCTGTTCAGTTCTCAAGGAACTTTCACAATGCTTTCCTAGGTAGGACCTGGCAGTTTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACATTGTGAAAGTTCCTTaGGAACTGAACAGAATCAGA | + |
Preference number: 2 (lower is better) Translates to: SLVATAVIVILRHIYFFYIVKVP*ELNRIR Trigger: TCTGATTCTGTTCAGTTCTCAAGGAACTTTCACAAT...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACGGAAATTACCTGAGTTaGTCTATCAACAACACACAA | + |
Preference number: 2 (lower is better) Translates to: ERNTLFTMPLKLCSTFINGNYLS*SINNTQ Trigger: TTGTGTGTTGTTGATAGAGCAACTCAGGTAATTTCC...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR GCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACCTTATCATGCCTGGCTaGTCAGAAATAAACCTTTTT | + |
Preference number: 2 (lower is better) Translates to: ERNTLFTMPLKLCSTFINLIMPG*SEINLF Trigger: AAAAAGGTTTATTTCTGAGCAGCCAGGCATGATAAG...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACTCAACCTATTTTCACTaGAGGCTAATCACAATTAAC | + |
Preference number: 2 (lower is better) Translates to: ERNTLFTMPLKLCSTFINSTYFH*RLITIN Trigger: GTTAATTGTGATTAGCCTCCAGTGAAAATAGGTTGA...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | CAGGCTTGTTGGCGCCACACTCGCCCAAGCACTGTCTaGAGCATTCCCTTACAGCAGTTGGTGCTACAAGAT | + |
Preference number: 3 (lower is better) Translates to: QACWRHTRPSTV*SIPLQQLVLQD Trigger: ATCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGTGGCGCCAACAAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | TCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTGTaGAGGACTAGGGGCCTTTACTTATCATGCCTGGCT | + |
Preference number: 3 (lower is better) Translates to: SRTKQFSCLSLL*RTRGLYLSCLA Trigger: AGCCAGGCATGATAAGTAAAGGCCCCTAGTCCTGCACAGGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CCA 72 bp | TTGCTTAAATGGAAAGCGTTTGAATCTCAGGCTTGTTaGCGCCACACTCGCCCAAGCACTGTCTGCAGCATT | + |
Preference number: 3 (lower is better) Translates to: LLKWKAFESQAC*RHTRPSTVCSI Trigger: AATGCTGCAGACAGTGCTTGGGCGAGTGTGGCGCCAACAAGCCTGAGATTCAAACGCTTTCCATTTAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | GCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTaGCTCAGCCTCCTGTGCAGGACTAGGGGCCTTTAC | + |
Preference number: 3 (lower is better) Translates to: AFTIYSRTKQFS*LSLLCRTRGLY Trigger: GTAAAGGCCCCTAGTCCTGCACAGGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR TCA 72 bp | TTAACTAGACTGCAGTATGGGAGCCATGGAATACTATaGAGGATATCTCAGACAGCAAGCAGTGGAGCGCCT | + |
Preference number: 3 (lower is better) Translates to: LTRLQYGSHGIL*RISQTASSGAP Trigger: AGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGTATTCCATGGCTCCCATACTGCAGTCTAGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CCA 72 bp | GCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTaGTGCTACAAGATAGAAACCGGTTACCATTATTTA | + |
Preference number: 3 (lower is better) Translates to: AQALSAAFPYSS*CYKIETGYHYL Trigger: TAAATAATGGTAACCGGTTTCTATCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CAA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCTGGAAATTACCTGAGTaGCTCTATCAACAACACACA | + |
Preference number: 3 (lower is better) Translates to: MTYRRLSLPMALSRTHVCWKLPE*LYQQHT Trigger: TGTGTGTTGTTGATAGAGCAACTCAGGTAATTTCCA...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | CTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTaGATTCACAGACATTCTTCGAACAATATTCTCAAC | + |
Preference number: 3 (lower is better) Translates to: LSLPMALSRTHV*IHRHSSNNILN Trigger: GTTGAGAATATTGTTCGAAGAATGTCTGTGAATGCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CAA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACCCGATCCTTCTCTGCTaGTGTATTCTGAGACAGGCT | + |
Preference number: 3 (lower is better) Translates to: SLVATAVIVILRHIYFFYPILLC*CILRQA Trigger: AGCCTGTCTCAGAATACACAAGCAGAGAAGGATCGG...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | GATCTACTGCCAAGAGACATAACCCCGATCCTTCTCTaGTTGTGTATTCTGAGACAGGCTTTTACTATCTAT | + |
Preference number: 3 (lower is better) Translates to: DLLPRDITPILL*LCILRQAFTIY Trigger: ATAGATAGTAAAAGCCTGTCTCAGAATACACAAGCAGAGAAGGATCGGGGTTATGTCTCTTGGCAGTAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | CAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTaGTACAAGATAGAAACCGGTTACCATTATTTATTT | + |
Preference number: 3 (lower is better) Translates to: QALSAAFPYSSW*YKIETGYHYLF Trigger: AAATAAATAATGGTAACCGGTTTCTATCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR-3UTR CAA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACCATTGTGAAAGTTCCTaGAGAACTGAACAGAATCAG | + |
Preference number: 3 (lower is better) Translates to: SLVATAVIVILRHIYFFYHCESS*RTEQNQ Trigger: CTGATTCTGTTCAGTTCTCAAGGAACTTTCACAATG...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR GCA 72 bp | AATGCTTTCTCTCACCTACATAAAACCTTGTTCCTTTaGAAACAATATGGACAGATGAGATATAAACCCTTA | + |
Preference number: 3 (lower is better) Translates to: NAFSHLHKTLFL*KQYGQMRYKPL Trigger: TAAGGGTTTATATCTCATCTGTCCATATTGTTTGCAAAGGAACAAGGTTTTATGTAGGTGAGAGAAAGCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGGCAACCGCCACTGTaGGGTACTGGAAACTGGAGA | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTERQPPL*GTGNWR Trigger: TCTCCAGTTTCCAGTACCTCACAGTGGCGGTTGCCT...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR CCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCTCATCCCACAGTCTCTaGCCACAGAGACAGCCGTCA | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESSSHSL*PQRQPS Trigger: TGACGGCTGTCTCTGTGGCCAGAGACTGTGGGATGA...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAACTCTCACGGTACTGTaGGTTGCCACCATGTCATGT | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRTLTVL*VATMSC Trigger: ACATGACATGGTGGCAACTCACAGTACCGTGAGAGT...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCGTGGCTGTGTGGTGCTaGAACGACACTCTCCTTGTT | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESVAVWC*NDTLLV Trigger: AACAAGGAGAGTGTCGTTTCAGCACCACACAGCCAC...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR GCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGCCACAAAACAAAGTGTaGCGCTTGTGTGTCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKPQNKV*RLCVSG Trigger: CCCAGAGACACACAAGCGGCACACTTTGTTTTGTGG...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAGGAAATGCCACCATGTaGCCTCTTCAAAGCACCACA | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRGNATM*PLQSTT Trigger: TGTGGTGCTTTGAAGAGGGCACATGGTGGCATTTCC...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGATGCCAGGTCAGCTTTaGCTCCAATTTTCTGTGTGC | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKMPGQL*LQFSVC Trigger: GCACACAGAAAATTGGAGTCAAAGCTGACCTGGCAT...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGACGGAGATCACAATCTaGGACAAGACGGAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTETEITI*DKTEKR Trigger: CCTCTTCTCCGTCTTGTCTCAGATTGTGATCTCCGT...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
||
CDS-3UTR GCA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAAGCACCACAATCATTTaGACCATCACCGCACATCCC | + |
Preference number: 4 (lower is better) Translates to: HSVRKAQQCMLLSTATSTSTTII*TITAHP Trigger: GGGATGTGCGGTGATGGTGCAAATGATTGTGGTGCT...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGGCTCAGATAAGGAAATaGCACCATGTGCCCTCTTCA | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKAQIRK*HHVPSS Trigger: TGAAGAGGGCACATGGTGGCATTTCCTTATCTGAGC...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCATGCCAGGTCAGCTTTaGCTCCAATTTTCTGTGTGC | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESMPGQL*LQFSVC Trigger: GCACACAGAAAATTGGAGTCAAAGCTGACCTGGCAT...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGGAATGGTTTTCCTTTTaGAAAGGCAACCGCCACTGT | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKEWFSF*KGNRHC Trigger: ACAGTGGCGGTTGCCTTTTCAAAAGGAAAACCATTC...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGTGTCTTCTGATCCGGTaGCATTCGAGCAAACACAGT | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTECLLIR*HSSKHS Trigger: ACTGTGTTTGCTCGAATGGCACCGGATCAGAAGACA...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACACTCCTACAAAAACCATaGCAAGCTTCCAGCGGCATA | + |
Preference number: 4 (lower is better) Translates to: HSVRKAQQCMLLSTATSTLLQKP*QASSGI Trigger: TATGCCGCTGGAAGCTTGCCATGGTTTTTGTAGGAG...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGCTCCTACAAAAACCATaGCAAGCTTCCAGCGGCATA | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTELLQKP*QASSGI Trigger: TATGCCGCTGGAAGCTTGCCATGGTTTTTGTAGGAG...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCTTCCCTGATAAGGTTTaGCACACAGGAGATACTGGG | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESFPDKV*HTGDTG Trigger: CCCAGTATCTCCTGTGTGCCAAACCTTATCAGGGAA...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCCCTTTACTACAGCTTTaGCTTCCGTCGTTGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESPLLQL*LPSLSE Trigger: CTCAGACAACGACGGAAGCCAAAGCTGTAGTAAAGG...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
||
CDS-3UTR TCA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAATTCATCAGTTGTCCTaGGAAGCACCACTTCACAGT | + |
Preference number: 4 (lower is better) Translates to: HSVRKAQQCMLLSTATSTIHQLS*EAPLHS Trigger: ACTGTGAAGTGGTGCTTCTCAGGACAACTGATGAAT...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCATTCATCAGTTGTCCTaGGAAGCACCACTTCACAGT | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESIHQLS*EAPLHS Trigger: ACTGTGAAGTGGTGCTTCTCAGGACAACTGATGAAT...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGACGCATCTGTTGTGACTaGCTCTGTGAGTATTTATTC | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRRICCD*LCEYLF Trigger: GAATAAATACTCACAGAGTCAGTCACAACAGATGCG...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGCTGCATCACAAGGCATaGCTGTCCCATTTAATGGAA | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTELHHKA*LSHLME Trigger: TTCCATTAAATGGGACAGTCATGCCTTGTGATGCAG...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCCTGCATCACAAGGCATaGCTGTCCCATTTAATGGAA | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESLHHKA*LSHLME Trigger: TTCCATTAAATGGGACAGTCATGCCTTGTGATGCAG...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAATGGTTTTCCTTTTaGAAAGGCAACCGCCACTGT | + |
Preference number: 4 (lower is better) Translates to: HSVRKAQQCMLLSTATSTEWFSF*KGNRHC Trigger: ACAGTGGCGGTTGCCTTTTCAAAAGGAAAACCATTC...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
||
CDS-3UTR TCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCGTGGCTGTGTGGTGCTaGAACGACACTCTCCTTGTT | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASVAVWC*NDTLLV Trigger: AACAAGGAGAGTGTCGTTTCAGCACCACACAGCCAC...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGATTCACAGTCTTTAACTaGAGCTCTAACACATGTGGC | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRFTVFN*SSNTCG Trigger: GCCACATGTGTTAGAGCTGCAGTTAAAGACTGTGAA...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGCCCCTGTGTCAGTCCTaGACTATGCTTTTCATAAAG | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTEPLCQS*TMLFIK Trigger: CTTTATGAAAAGCATAGTGCAGGACTGACACAGGGG...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAGATCCGGTTATGAAGTaGTGTTTCTTCTTCAGTTGC | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRDPVMK*CFFFSC Trigger: GCAACTGAAGAAGAAACAGCACTTCATAACCGGATC...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACACGCATCTGTTGTGACTaGCTCTGTGAGTATTTATTC | + |
Preference number: 4 (lower is better) Translates to: HSVRKAQQCMLLSTATSTRICCD*LCEYLF Trigger: GAATAAATACTCACAGAGTCAGTCACAACAGATGCG...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGTCAATGAAGAGAAACTaGAAGTCTCCCAGGTTACTC | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTESMKRN*KSPRLL Trigger: GAGTAACCTGGGAGACTTTCAGTTTCTCTTCATTGA...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGACGGAGATCACAATCTaGGACAAGACGGAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: TMKDISDSKQWSALLSRKTEITI*DKTEKR Trigger: CCTCTTCTCCGTCTTGTCTCAGATTGTGATCTCCGT...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGGCTATGGTGATAATCTaGCATGATCCATTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKAMVII*HDPFSF Trigger: AAAGGAGAATGGATCATGTCAGATTATCACCATAGC...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGTGTTTCTTCTTCAGTTaGTTCTTCCAGAATCCATCC | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKCFFFS*FFQNPS Trigger: GGATGGATTCTGGAAGAAGCAACTGAAGAAGAAACA...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCGATCCGGTTATGAAGTaGTGTTTCTTCTTCAGTTGC | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESDPVMK*CFFFSC Trigger: GCAACTGAAGAAGAAACAGCACTTCATAACCGGATC...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCCATTTCTTGGTTTCCTaGAGTTGTAGGTTCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESHFLVS*SCRFRK Trigger: CTTCCTGAACCTACAACTGCAGGAAACCAAGAAATG...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGCAAATCTTCAAGTACTaGAGGGGTTTCCTGCTTCAA | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTEQIFKY*RGFLLQ Trigger: TTGAAGCAGGAAACCCCTGCAGTACTTGAAGATTTG...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | AGTGCCATTCTGACACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACAACAGCTCCATTTCTTaGTTTCCTGCAGTTGTAGGT | + |
Preference number: 4 (lower is better) Translates to: SAILTQRQKSSTVHAAEHNSSIS*FPAVVG Trigger: ACCTACAACTGCAGGAAACCAAGAAATGGAGCTGTT...GTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTGTCAGAATGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCTTCCCTGATAAGGTTTaGCACACAGGAGATACTGGG | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCFPDKV*HTGDTG Trigger: CCCAGTATCTCCTGTGTGCCAAACCTTATCAGGGAA...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | AGTGCCATTCTGACACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACGTAACACTGAAGTACTaGATGATGCTGTATAACGCC | + |
Preference number: 4 (lower is better) Translates to: SAILTQRQKSSTVHAAEHVTLKY*MMLYNA Trigger: GGCGTTATACAGCATCATCCAGTACTTCAGTGTTAC...GTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTGTCAGAATGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | AGTGCCATTCTGACACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACATAATCTCAAGAACCTaGTCAACAGAGGCAACTGGA | + |
Preference number: 4 (lower is better) Translates to: SAILTQRQKSSTVHAAEHIISRT*STEATG Trigger: TCCAGTTGCCTCTGTTGACCAGGTTCTTGAGATTAT...GTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTGTCAGAATGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGTTTTCTTCAGTCAGATaGACAGCATGGCCATTAGAA | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTEFSSVR*TAWPLE Trigger: TTCTAATGGCCATGCTGTTCATCTGACTGAAGAAAA...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGTCCTTTCACATCCACTaGAGGATTTGGCAAATTAGT | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTESFHIH*RIWQIS Trigger: ACTAATTTGCCAAATCCTTCAGTGGATGTGAAAGGA...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCGGCATGATCCGGTTATaGAGTGCTGTTTCTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCGMIRL*SAVSSS Trigger: TGAAGAAGAAACAGCACTTCATAACCGGATCATGCC...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAATAATAACTTTATCCTaGGGTAGAATCATCCCACAG | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRIITLS*GRIIPQ Trigger: CTGTGGGATGATTCTACCTCAGGATAAAGTTATTAT...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR TCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCGGTGATAATCTGACATaGTCCATTCTCCTTTACTAC | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESGDNLT*SILLYY Trigger: GTAGTAAAGGAGAATGGATCATGTCAGATTATCACC...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
||
CDS-3UTR TCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCGCTATGGTGATAATCTaGCATGATCCATTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESAMVII*HDPFSF Trigger: AAAGGAGAATGGATCATGTCAGATTATCACCATAGC...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
||
CDS-3UTR GCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCACCACACTCATCCGTTaGAAGGCAGAAGAAAATGGA | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCTTLIR*KAEENG Trigger: TCCATTTTCTTCTGCCTTGCAACGGATGAGTGTGGT...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGACGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCA | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRRMLAL*KSSSTA Trigger: TGCAGTACTTGAAGATTTGCATAAAGCCAACATTCG...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR GCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTGTCTTCTGATCCGGTaGCATTCGAGCAAACACAGT | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASCLLIR*HSSKHS Trigger: ACTGTGTTTGCTCGAATGGCACCGGATCAGAAGACA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGACAGATGTTTATCCTCTaGGGACTAATACAGAAAATC | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRQMFIL*GLIQKI Trigger: GATTTTCTGTATTAGTCCCCAGAGGATAAACATCTG...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGAGAAGAAAATGGAAACTaGCGAACAATTCCTATCTCA | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATREENGN*RTIPIS Trigger: TGAGATAGGAATTGTTCGCCAGTTTCCATTTTCTTC...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCCCTTTACTACAGCTTTaGCTTCCGTCGTTGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASPLLQL*LPSLSE Trigger: CTCAGACAACGACGGAAGCCAAAGCTGTAGTAAAGG...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | AGTGCCATTCTGACACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACCTGTATAATGCCAATTaGTCTTGGCAACTTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: SAILTQRQKSSTVHAAEHLYNAN*SWQLFH Trigger: ATGGAAAAGTTGCCAAGATCAATTGGCATTATACAG...GTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTGTCAGAATGGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGTTAGGAACAAGATCTTaGAAATGTTCCAGTATCACC | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTELGTRS*KCSSIT Trigger: GGTGATACTGGAACATTTTCAAGATCTTGTTCCTAA...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACAGGCAACCGCCACTGTaGGGTACTGGAAACTGGAGA | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYRQPPL*GTGNWR Trigger: TCTCCAGTTTCCAGTACCTCACAGTGGCGGTTGCCT...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCCAAATCTTCAAGTACTaGAGGGGTTTCCTGCTTCAA | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCQIFKY*RGFLLQ Trigger: TTGAAGCAGGAAACCCCTGCAGTACTTGAAGATTTG...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAACCGCTTGTGTGTCTCTaGGCTGTACTGCTCCTCCCC | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKPLVCL*AVLLLP Trigger: GGGGAGGAGCAGTACAGCCCAGAGACACACAAGCGG...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCTTTCTCAAAATCAACTaGAACTGTTTCCGGTTTGCA | + |
Preference number: 4 (lower is better) Translates to: VRKAQQCMLLSTATSTESFLKIN*NCFRFA Trigger: TGCAAACCGGAAACAGTTCCAGTTGATTTTGAGAAA...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ACACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGCACGGAAACCTTGTTTaGTATAATCTTCTAACACTT | + |
Preference number: 4 (lower is better) Translates to: TLAQALSAAFPYSSWCYKHGNLV*YNLLTL Trigger: AAGTGTTAGAAGATTATACCAAACAAGGTTTCCGTG...CTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGATCCTCTAAACTATCATaGGCAAGTTTGATTGGAATA | + |
Preference number: 4 (lower is better) Translates to: HSPKHCLQHSLTAVGATRSSKLS*ASLIGI Trigger: TATTCCAATCAAACTTGCCCATGATAGTTTAGAGGA...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCATAATCTCAAGAACCTaGTCAACAGAGGCAACTGGA | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCIISRT*STEATG Trigger: TCCAGTTGCCTCTGTTGACCAGGTTCTTGAGATTAT...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGATATATATGCGCCACTaGTATGGTACACACATAATC | + |
Preference number: 4 (lower is better) Translates to: SVRKAQQCMLLSTATSTEIYMRH*YGTHII Trigger: GATTATGTGTGTACCATACCAGTGGCGCATATATAT...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR TCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCTCCTTTCACATCCACTaGAGGATTTGGCAAATTAGT | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCSFHIH*RIWQIS Trigger: ACTAATTTGCCAAATCCTTCAGTGGATGTGAAAGGA...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTTTTTCAGTCTTCTCTaGGCATACACAATCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASFFSLL*AYTIPA Trigger: TGCTGGGATTGTGTATGCTCAGAGAAGACTGAAAAA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCCAGTATCACCGAAAATaGCTTTCCATTCATCGCAAA | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCQYHRK*LSIHRK Trigger: TTTGCGATGAATGGAAAGTCATTTTCGGTGATACTG...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCGCTATGGTGATAATCTaGCATGATCCATTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCAMVII*HDPFSF Trigger: AAAGGAGAATGGATCATGTCAGATTATCACCATAGC...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGCATTTCTTGGTTTCCTaGAGTTGTAGGTTCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: TMKDISDSKQWSALLSRKHFLVS*SCRFRK Trigger: CTTCCTGAACCTACAACTGCAGGAAACCAAGAAATG...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCACTGCAGGGGTTTCCTaGTTCAATTTGTTCTGCATT | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASTAGVS*FNLFCI Trigger: AATGCAGAACAAATTGAAGCAGGAAACCCCTGCAGT...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCCATTTTCAAATCAAGTaGGTCACCAGAAAGTACACC | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCHFQIK*VTRKYT Trigger: GGTGTACTTTCTGGTGACCCACTTGATTTGAAAATG...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACACCAGAATCCATCCAATaGCTTCAAACATTTTCAAAT | + |
Preference number: 4 (lower is better) Translates to: HSVRKAQQCMLLSTATSTPESIQ*LQTFSN Trigger: ATTTGAAAATGTTTGAAGCCATTGGATGGATTCTGG...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGAACAGCTCCATTTCTTaGTTTCCTGCAGTTGTAGGT | + |
Preference number: 4 (lower is better) Translates to: TMKDISDSKQWSALLSRKNSSIS*FPAVVG Trigger: ACCTACAACTGCAGGAAACCAAGAAATGGAGCTGTT...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCATAATCTCAAGAACCTaGTCAACAGAGGCAACTGGA | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASIISRT*STEATG Trigger: TCCAGTTGCCTCTGTTGACCAGGTTCTTGAGATTAT...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CAA 72 bp | CTACTGCCAAGAGACATAACCCCGATCCTTCTCTGCTaGTGTATTCTGAGACAGGCTTTTACTATCTATTCC | + |
Preference number: 4 (lower is better) Translates to: LLPRDITPILLC*CILRQAFTIYS Trigger: GGAATAGATAGTAAAAGCCTGTCTCAGAATACACAAGCAGAGAAGGATCGGGGTTATGTCTCTTGGCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTCCATTTCATCTTCTTaGCCCTTGTTGATAGTCTTC | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASSISSS*PLLIVF Trigger: GAAGACTATCAACAAGGGTCAAGAAGATGAAATGGA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTTTTCTTCAGTCAGATaGACAGCATGGCCATTAGAA | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASFSSVR*TAWPLE Trigger: TTCTAATGGCCATGCTGTTCATCTGACTGAAGAAAA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGGGCATGATCCGGTTATaGAGTGCTGTTTCTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLGMIRL*SAVSSS Trigger: TGAAGAAGAAACAGCACTTCATAACCGGATCATGCC...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAACCCAGATATAAGGCCTaGAGGTGGTCTCTGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKPRYKA*RWSLCH Trigger: GTGGCACAGAGACCACCTTCAGGCCTTATATCTGGG...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAAAGGCAACCGCCACTGTaGGGTACTGGAAACTGGAGA | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKRQPPL*GTGNWR Trigger: TCTCCAGTTTCCAGTACCTCACAGTGGCGGTTGCCT...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGCATTTTCAAATCAAGTaGGTCACCAGAAAGTACACC | + |
Preference number: 4 (lower is better) Translates to: TMKDISDSKQWSALLSRKHFQIK*VTRKYT Trigger: GGTGTACTTTCTGGTGACCCACTTGATTTGAAAATG...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCATATATATGCGCCACTaGTATGGTACACACATAATC | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCIYMRH*YGTHII Trigger: GATTATGTGTGTACCATACCAGTGGCGCATATATAT...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGGTATTTTCCACTCGCTaGATTCCCCACAGATCTAAA | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLVFSTR*IPHRSK Trigger: TTTAGATCTGTGGGGAATTCAGCGAGTGGAAAATAC...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTTACCAACATCTCACTaGAAACATTGTCTTCTGGTA | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASLPTSH*KHCLLV Trigger: TACCAGAAGACAATGTTTGCAGTGAGATGTTGGTAA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGATATGCTGTACTTTATaGCAGGTCAGCTTTGACTCC | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLICCTL*QVSFDS Trigger: GGAGTCAAAGCTGACCTGGCATAAAGTACAGCATAT...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACGCTCAGATAAGGAAATaGCACCATGTGCCCTCTTCA | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYAQIRK*HHVPSS Trigger: TGAAGAGGGCACATGGTGGCATTTCCTTATCTGAGC...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCTCCTCTAAACTATCATaGGCAAGTTTGATTGGAATA | + |
Preference number: 4 (lower is better) Translates to: MTYRRLSLPMALSRTHVCSSKLS*ASLIGI Trigger: TATTCCAATCAAACTTGCCCATGATAGTTTAGAGGA...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACACTCTCACGGTACTGTaGGTTGCCACCATGTCATGT | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINTLTVL*VATMSC Trigger: ACATGACATGGTGGCAACTCACAGTACCGTGAGAGT...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACACGGAGATCACAATCTaGGACAAGACGGAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINTEITI*DKTEKR Trigger: CCTCTTCTCCGTCTTGTCTCAGATTGTGATCTCCGT...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACCCCCTGTGTCAGTCCTaGACTATGCTTTTCATAAAG | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYPLCQS*TMLFIK Trigger: CTTTATGAAAAGCATAGTGCAGGACTGACACAGGGG...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACCCACAAAACAAAGTGTaGCGCTTGTGTGTCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINPQNKV*RLCVSG Trigger: CCCAGAGACACACAAGCGGCACACTTTGTTTTGTGG...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACAGCACCACAATCATTTaGACCATCACCGCACATCCC | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINSTTII*TITAHP Trigger: GGGATGTGCGGTGATGGTGCAAATGATTGTGGTGCT...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAAGGAAATGCCACCATGTaGCCTCTTCAAAGCACCACA | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKGNATM*PLQSTT Trigger: TGTGGTGCTTTGAAGAGGGCACATGGTGGCATTTCC...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTTTTGCATTCAAATTTaGTTGATTCTCCACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: DRLLLSIPGLNNSPASASFCIQI*LILHRK Trigger: CTTCCTGTGGAGAATCAACCAAATTTGAATGCAAAA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGTTTTGCATTCAAATTTaGTTGATTCTCCACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: TMKDISDSKQWSALLSRKFCIQI*LILHRK Trigger: CTTCCTGTGGAGAATCAACCAAATTTGAATGCAAAA...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
||
CDS-3UTR CCA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGCCAGAATCCATCCAATaGCTTCAAACATTTTCAAAT | + |
Preference number: 4 (lower is better) Translates to: TMKDISDSKQWSALLSRKPESIQ*LQTFSN Trigger: ATTTGAAAATGTTTGAAGCCATTGGATGGATTCTGG...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGCTGTATAATGCCAATTaGTCTTGGCAACTTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLLYNAN*SWQLFH Trigger: ATGGAAAAGTTGCCAAGATCAATTGGCATTATACAG...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACTCAATGAAGAGAAACTaGAAGTCTCCCAGGTTACTC | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYSMKRN*KSPRLL Trigger: GAGTAACCTGGGAGACTTTCAGTTTCTCTTCATTGA...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGACCATTAATAAGTACTaGATCACAAGGCATGACTGT | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLTINKY*ITRHDC Trigger: ACAGTCATGCCTTGTGATGCAGTACTTATTAATGGT...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGGAAGAAAATGGAAACTaGCGAACAATTCCTATCTCA | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLEENGN*RTIPIS Trigger: TGAGATAGGAATTGTTCGCCAGTTTCCATTTTCTTC...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACGTAACACTGAAGTACTaGATGATGCTGTATAACGCC | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYVTLKY*MMLYNA Trigger: GGCGTTATACAGCATCATCCAGTACTTCAGTGTTAC...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAACCTTTACTACAGCTTTaGCTTCCGTCGTTGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKPLLQL*LPSLSE Trigger: CTCAGACAACGACGGAAGCCAAAGCTGTAGTAAAGG...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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3UTR CAA 72 bp | GCCAGGTCCTACCTAGGAAAGCATTGTGAAAGTTCCTaGAGAACTGAACAGAATCAGATAAAACACAAATGT | + |
Preference number: 4 (lower is better) Translates to: ARSYLGKHCESS*RTEQNQIKHKC Trigger: ACATTTGTGTTTTATCTGATTCTGTTCAGTTCTCAAGGAACTTTCACAATGCTTTCCTAGGTAGGACCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACTCCATTTCATCTTCTTaGCCCTTGTTGATAGTCTTC | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYSISSS*PLLIVF Trigger: GAAGACTATCAACAAGGGTCAAGAAGATGAAATGGA...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACGCATTCAAATTTGGTTaGTTCTCCACAGGAAGAAAG | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYAFKFG*FSTGRK Trigger: CTTTCTTCCTGTGGAGAATCAACCAAATTTGAATGC...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACGGTGATAATCTGACATaGTCCATTCTCCTTTACTAC | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYGDNLT*SILLYY Trigger: GTAGTAAAGGAGAATGGATCATGTCAGATTATCACC...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGCACGGAAACCTTGTTTaGTATAATCTTCTAACACTT | + |
Preference number: 4 (lower is better) Translates to: QLKRSKMHSFIESFTGQLHGNLV*YNLLTL Trigger: AAGTGTTAGAAGATTATACCAAACAAGGTTTCCGTG...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACTTTTTCAGTCTTCTCTaGGCATACACAATCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINFFSLL*AYTIPA Trigger: TGCTGGGATTGTGTATGCTCAGAGAAGACTGAAAAA...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACTTAGGAACAAGATCTTaGAAATGTTCCAGTATCACC | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYLGTRS*KCSSIT Trigger: GGTGATACTGGAACATTTTCAAGATCTTGTTCCTAA...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAATTCACAGTCTTTAACTaGAGCTCTAACACATGTGGC | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKFTVFN*SSNTCG Trigger: GCCACATGTGTTAGAGCTGCAGTTAAAGACTGTGAA...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAAATATGCTGTACTTTATaGCAGGTCAGCTTTGACTCC | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKICCTL*QVSFDS Trigger: GGAGTCAAAGCTGACCTGGCATAAAGTACAGCATAT...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACCGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCA | + |
Preference number: 4 (lower is better) Translates to: SLVATAVIVILRHIYFFYRMLAL*KSSSTA Trigger: TGCAGTACTTGAAGATTTGCATAAAGCCAACATTCG...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAACAGTATCACCGAAAATaGCTTTCCATTCATCGCAAA | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKQYHRK*LSIHRK Trigger: TTTGCGATGAATGGAAAGTCATTTTCGGTGATACTG...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACTGTTTCTTCTTCAGTTaGTTCTTCCAGAATCCATCC | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINCFFFS*FFQNPS Trigger: GGATGGATTCTGGAAGAAGCAACTGAAGAAGAAACA...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACCTCCAATTTTCTGTGTaGAAGAGCAATTACACGGAA | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINLQFSV*KSNYTE Trigger: TTCCGTGTAATTGCTCTTGCACACAGAAAATTGGAG...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR TCA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACATAATAACTTTATCCTaGGGTAGAATCATCCCACAG | + |
Preference number: 4 (lower is better) Translates to: ERNTLFTMPLKLCSTFINIITLS*GRIIPQ Trigger: CTGTGGGATGATTCTACCTCAGGATAAAGTTATTAT...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR GCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAATTACCAACATCTCACTaGAAACATTGTCTTCTGGTA | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKLPTSH*KHCLLV Trigger: TACCAGAAGACAATGTTTGCAGTGAGATGTTGGTAA...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CCA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAACAGATGTTTATCCTCTaGGGACTAATACAGAAAATC | + |
Preference number: 4 (lower is better) Translates to: PIIQRRDIARLRSNSKQKQMFIL*GLIQKI Trigger: GATTTTCTGTATTAGTCCCCAGAGGATAAACATCTG...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGACAATCCCAGCAGTCATaGCAGCAGGAAGAGCAGGTG | + |
Preference number: 5 (lower is better) Translates to: HSPKHCLQHSLTAVGATRQSQQS*QQEEQV Trigger: CACCTGCTCTTCCTGCTGCAATGACTGCTGGGATTG...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS TCA 90 bp | CATGATCCATTCTCCTTTACTACAGCTTTGGCTTCCGTCGTTGTCTaGGGTTTAGGCGGCCACTCAGGATCAAAGCGGAGCTCCTGTGCT | + |
Preference number: 5 (lower is better) Translates to: HDPFSFTTALASVVV*GLGGHSGSKRSSCA Trigger: AGCACAGGAGCTCCGCTTTGATCCTGAGTGGCCGCCTAAACCTCAGACAACGACGGAAGCCAAAGCTGTAGTAAAGGAGAATGGATCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR CAA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACACAATGCCTCCACCAATaGTGTCTTCTGATCCGGTGC | + |
Preference number: 5 (lower is better) Translates to: HSVRKAQQCMLLSTATSTQCLHQ*CLLIRC Trigger: GCACCGGATCAGAAGACACAATTGGTGGAGGCATTG...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 90 bp | GTCCCACAAAACAAAGTGTGCCGCTTGTGTGTCTCTGGGCTGTACTaGTCCTCCCCCATTCCTTTCACATCCACTGAAGGATTTGGCAAA | + |
Preference number: 5 (lower is better) Translates to: VPQNKVCRLCVSGLY*SSPIPFTSTEGFGK Trigger: TTTGCCAAATCCTTCAGTGGATGTGAAAGGAATGGGGGAGGAGCAGTACAGCCCAGAGACACACAAGCGGCACACTTTGTTTTGTGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCTCTCACCTAGTGTCCTaGCAACCACACTCATCCGTT | + |
Preference number: 5 (lower is better) Translates to: VRKAQQCMLLSTATSTESSHLVS*QPHSSV Trigger: AACGGATGAGTGTGGTTGCAAGGACACTAGGTGAGA...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCAACCACACTCATCCGTaGCAAGGCAGAAGAAAATGG | + |
Preference number: 5 (lower is better) Translates to: VRKAQQCMLLSTATSTESNHTHP*QGRRKW Trigger: CCATTTTCTTCTGCCTTGCAACGGATGAGTGTGGTT...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGATATGCCAGGTCAGCTTaGACTCCAATTTTCTGTGTG | + |
Preference number: 5 (lower is better) Translates to: HSPKHCLQHSLTAVGATRYARSA*TPIFCV Trigger: CACACAGAAAATTGGAGTCAAAGCTGACCTGGCATA...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGACTATCATGGGCAAGTTaGATTGGAATAGCCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: HSPKHCLQHSLTAVGATRLSWAS*IGIASE Trigger: CTCAGAGGCTATTCCAATCAAACTTGCCCATGATAG...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 90 bp | AAATTCATCAGTTGTCCTGAGAAGCACCACTTCACAGTCTTTAACTaGAGCTCTAACACATGTGGCTTTCACTCGCCACTCAGGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: KFISCPEKHHFTVFN*SSNTCGFHSPLRQP Trigger: TGGCTGCCTGAGTGGCGAGTGAAAGCCACATGTGTTAGAGCTGCAGTTAAAGACTGTGAAGTGGTGCTTCTCAGGACAACTGATGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 90 bp | GTCTACGTTCTGCAATGCCTCCACCAATTGTGTCTTCTGATCCGGTaGCATTCGAGCAAACACAGTACCATGCAACATCAACTTAGGAAC | + |
Preference number: 5 (lower is better) Translates to: VYVLQCLHQLCLLIR*HSSKHSTMQHQLRN Trigger: GTTCCTAAGTTGATGTTGCATGGTACTGTGTTTGCTCGAATGGCACCGGATCAGAAGACACAATTGGTGGAGGCATTGCAGAACGTAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGCAATCCCAGCAGTCATaGCAGCAGGAAGAGCAGGTG | + |
Preference number: 5 (lower is better) Translates to: QLKRSKMHSFIESFTGQLQSQQS*QQEEQV Trigger: CACCTGCTCTTCCTGCTGCAATGACTGCTGGGATTG...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | AGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGCAACTTTTCCATCCTTaGGAGGTAATGCTTCAGCAA | + |
Preference number: 5 (lower is better) Translates to: SVRKAQQCMLLSTATSTEQLFHP*EVMLQQ Trigger: TTGCTGAAGCATTACCTCCAAAGGATGGAAAAGTTG...CTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CACTCGCCCAAGCACTGTCTGCAGCATTCCCTTACAGCAGTTGGTGCTACAAGACCTTGTTTGTCTCGATaGAATACAACTTTCCAAAGG | + |
Preference number: 5 (lower is better) Translates to: HSPKHCLQHSLTAVGATRPCLSR*NTTFQR Trigger: CCTTTGGAAAGTTGTATTCAATCGAGACAAACAAGG...TCTTGTAGCACCAACTGCTGTAAGGGAATGCTGCAGACAGTGCTTGGGCGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCCGACACTCTCCTTGTTaGTCTCGATTGAATACAACT | + |
Preference number: 5 (lower is better) Translates to: VRKAQQCMLLSTATSTESRHSPC*SRLNTT Trigger: AGTTGTATTCAATCGAGACAAACAAGGAGAGTGTCG...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS GCA 90 bp | TCCATCCTCTTCTCACCTAGTGTCCTTGCAACCACACTCATCCGTTaGAAGGCAGAAGAAAATGGAAACTGGCGAACAATTCCTATCTCA | + |
Preference number: 5 (lower is better) Translates to: SILFSPSVLATTLIR*KAEENGNWRTIPIS Trigger: TGAGATAGGAATTGTTCGCCAGTTTCCATTTTCTTCTGCCTTGCAACGGATGAGTGTGGTTGCAAGGACACTAGGTGAGAAGAGGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGTCACGGTACTGTGAGTaGCCACCATGTCATGTAACA | + |
Preference number: 5 (lower is better) Translates to: TMKDISDSKQWSALLSRKSRYCE*PPCHVT Trigger: TGTTACATGACATGGTGGCAACTCACAGTACCGTGA...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCAAACAGCTCCATTTCTaGGTTTCCTGCAGTTGTAGG | + |
Preference number: 5 (lower is better) Translates to: MTYRRLSLPMALSRTHVCKQLHF*VSCSCR Trigger: CCTACAACTGCAGGAAACCAAGAAATGGAGCTGTTT...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCAACCACACTCATCCGTaGCAAGGCAGAAGAAAATGG | + |
Preference number: 5 (lower is better) Translates to: DRLLLSIPGLNNSPASASNHTHP*QGRRKW Trigger: CCATTTTCTTCTGCCTTGCAACGGATGAGTGTGGTT...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | AGTGCCATTCTGACACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTCCAACATGCGCTTCTaGTTGTATTACAAACATCTG | + |
Preference number: 5 (lower is better) Translates to: SAILTQRQKSSTVHAAEHSNMRF*LYYKHL Trigger: CAGATGTTTGTAATACAACAAGAAGCGCATGTTGGA...GTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTGTCAGAATGGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR CAA 90 bp | AGTGCCATTCTGACACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACCCTTGTTTGTCTCGATaGAATACAACTTTCCAAAGG | + |
Preference number: 5 (lower is better) Translates to: SAILTQRQKSSTVHAAEHPCLSR*NTTFQR Trigger: CCTTTGGAAAGTTGTATTCAATCGAGACAAACAAGG...GTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTGTCAGAATGGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS TCA 90 bp | TTTCCATCCTTTGGAGGTAATGCTTCAGCAATAATAACTTTATCCTaGGGTAGAATCATCCCACAGTCTCTGGCCACAGAGACAGCCGTC | + |
Preference number: 5 (lower is better) Translates to: FPSFGGNASAIITLS*GRIIPQSLATETAV Trigger: GACGGCTGTCTCTGTGGCCAGAGACTGTGGGATGATTCTACCTCAGGATAAAGTTATTATTGCTGAAGCATTACCTCCAAAGGATGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCAAACAGCTCCATTTCTaGGTTTCCTGCAGTTGTAGG | + |
Preference number: 5 (lower is better) Translates to: DRLLLSIPGLNNSPASASKQLHF*VSCSCR Trigger: CCTACAACTGCAGGAAACCAAGAAATGGAGCTGTTT...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CAGCTCAAGAGGTCTAAGATGCATAGCTTCATAGAATCATTCACGGGACAATTGTCTCACCTAGTGTCCTaGCAACCACACTCATCCGTT | + |
Preference number: 5 (lower is better) Translates to: QLKRSKMHSFIESFTGQLSHLVS*QPHSSV Trigger: AACGGATGAGTGTGGTTGCAAGGACACTAGGTGAGA...CAATTGTCCCGTGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTATGCCAGGTCAGCTTaGACTCCAATTTTCTGTGTG | + |
Preference number: 5 (lower is better) Translates to: DRLLLSIPGLNNSPASASYARSA*TPIFCV Trigger: CACACAGAAAATTGGAGTCAAAGCTGACCTGGCATA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAGAGAGCCTTAGGAACAAGATCTaGAAAATGTTCCAGTATCAC | + |
Preference number: 5 (lower is better) Translates to: VRKAQQCMLLSTATSTESLRNKI*KMFQYH Trigger: GTGATACTGGAACATTTTCAAGATCTTGTTCCTAAG...GCTCTCTGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CACAGCGTCAGAAAAGCTCAACAGTGCATGCTGCTGAGCACTGCTACTAGCACAATAGACACGAAGGCATaGATAAGAACAATGATAAGC | + |
Preference number: 5 (lower is better) Translates to: HSVRKAQQCMLLSTATSTIDTKA*IRTMIS Trigger: GCTTATCATTGTTCTTATCAATGCCTTCGTGTCTAT...TGTGCTAGTAGCAGTGCTCAGCAGCATGCACTGTTGAGCTTTTCTGACGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS GCA 90 bp | CTCATAAATAGCTGGAAGTTCAAACAGCTCCATTTCTTGGTTTCCTaGAGTTGTAGGTTCAGGAAGCAGTTGTTTGGAAGGACGAACCAC | + |
Preference number: 5 (lower is better) Translates to: LINSWKFKQLHFLVS*SCRFRKQLFGRTNH Trigger: GTGGTTCGTCCTTCCAAACAACTGCTTCCTGAACCTACAACTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCTATTTATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 90 bp | GGAGGAGGAGAAAACCACCAGTACAAATCACTCCTACAAAAACCATaGCAAGCTTCCAGCGGCATAAGTTATAGCCATGTATCTCCATTT | + |
Preference number: 5 (lower is better) Translates to: GGGENHQYKSLLQKP*QASSGISYSHVSPF Trigger: AAATGGAGATACATGGCTATAACTTATGCCGCTGGAAGCTTGCCATGGTTTTTGTAGGAGTGATTTGTACTGGTGGTTTTCTCCTCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229616.2 |
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CDS-3UTR CAA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCCTCCATTTCATCTTCTaGACCCTTGTTGATAGTCTT | + |
Preference number: 5 (lower is better) Translates to: MTYRRLSLPMALSRTHVCLHFIF*TLVDSL Trigger: AAGACTATCAACAAGGGTCAAGAAGATGAAATGGAG...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCCAACTTTTCCATCCTTaGGAGGTAATGCTTCAGCAA | + |
Preference number: 5 (lower is better) Translates to: DRLLLSIPGLNNSPASASQLFHP*EVMLQQ Trigger: TTGCTGAAGCATTACCTCCAAAGGATGGAAAAGTTG...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | ATGACTTACAGAAGACTCAGTCTACCTATGGCACTAAGCAGGACCCATGTCTGCTCCAACATGCGCTTCTaGTTGTATTACAAACATCTG | + |
Preference number: 5 (lower is better) Translates to: MTYRRLSLPMALSRTHVCSNMRF*LYYKHL Trigger: CAGATGTTTGTAATACAACAAGAAGCGCATGTTGGA...GCAGACATGGGTCCTGCTTAGTGCCATAGGTAGACTGAGTCTTCTGTAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCCGACACTCTCCTTGTTaGTCTCGATTGAATACAACT | + |
Preference number: 5 (lower is better) Translates to: DRLLLSIPGLNNSPASASRHSPC*SRLNTT Trigger: AGTTGTATTCAATCGAGACAAACAAGGAGAGTGTCG...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100013.9 |
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CDS TCA 90 bp | CTGATGATTCACTACACTGTGACAGGGAGTCTGTATAATGCCAATTaGTCTTGGCAACTTTTCCATCCTTTGGAGGTAATGCTTCAGCAA | + |
Preference number: 5 (lower is better) Translates to: LMIHYTVTGSLYNAN*SWQLFHPLEVMLQQ Trigger: TTGCTGAAGCATTACCTCCAAAGGATGGAAAAGTTGCCAAGATCAATTGGCATTATACAGACTCCCTGTCACAGTGTAGTGAATCATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GACAGGCTTTTACTATCTATTCCAGGACTAAACAATTCTCCTGCCTCAGCCTCCTGCATTCAAATTTGGTaGATTCTCCACAGGAAGAAA | + |
Preference number: 5 (lower is better) Translates to: DRLLLSIPGLNNSPASASCIQIW*ILHRKK Trigger: TTTCTTCCTGTGGAGAATCAACCAAATTTGAATGCA...GGAGGCTGAGGCAGGAGAATTGTTTAGTCCTGGAATAGATAGTAAAAGCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | ACTATGAAGGATATCTCAGACAGCAAGCAGTGGAGCGCCTTACTGTCTAGAAAGTGCATTCAAATTTGGTaGATTCTCCACAGGAAGAAA | + |
Preference number: 5 (lower is better) Translates to: TMKDISDSKQWSALLSRKCIQIW*ILHRKK Trigger: TTTCTTCCTGTGGAGAATCAACCAAATTTGAATGCA...CTTTCTAGACAGTAAGGCGCTCCACTGCTTGCTGTCTGAGATATCCTTCATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACTCAGGAAGCAGTTGTTaGGAAGGACGAACCACAGTA | + |
Preference number: 5 (lower is better) Translates to: SLVATAVIVILRHIYFFYSGSSC*EGRTTV Trigger: TACTGTGGTTCGTCCTTCCAAACAACTGCTTCCTGA...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 90 bp | ACACAGCAGAAACAAGTAGGCATCTCTATAGAGTTTAAAGTCAGTTaGCTTGGGATACAGTATAGAACGAACAAGCTGTCCTTTGGAAGT | + |
Preference number: 5 (lower is better) Translates to: TQQKQVGISIEFKVS*LGIQYRTNKLSFGS Trigger: ACTTCCAAAGGACAGCTTGTTCGTTCTATACTGTATCCCAAGCCAACTGACTTTAAACTCTATAGAGATGCCTACTTGTTTCTGCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 90 bp | ACGAAGGCATTGATAAGAACAATGATAAGCATATATATGCGCCACTaGTATGGTACACACATAATCTCAAGAACCTGGTCAACAGAGGCA | + |
Preference number: 5 (lower is better) Translates to: TKALIRTMISIYMRH*YGTHIISRTWSTEA Trigger: TGCCTCTGTTGACCAGGTTCTTGAGATTATGTGTGTACCATACCAGTGGCGCATATATATGCTTATCATTGTTCTTATCAATGCCTTCGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS-3UTR CAA 90 bp | TCACTAGTGGCAACAGCAGTAATAGTGATCCTGAGACACATTTACTTTTTCTACCTATCATGGGCAAGTTaGATTGGAATAGCCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: SLVATAVIVILRHIYFFYLSWAS*IGIASE Trigger: CTCAGAGGCTATTCCAATCAAACTTGCCCATGATAG...GTAGAAAAAGTAAATGTGTCTCAGGATCACTATTACTGCTGTTGCCACTAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 90 bp | GACCATGACAGTTCGAATGTTGGCTTTATGCAAATCTTCAAGTACTaGAGGGGTTTCCTGCTTCAATTTGTTCTGCATTATAATCAATCC | + |
Preference number: 5 (lower is better) Translates to: DHDSSNVGFMQIFKY*RGFLLQFVLHYNQS Trigger: GGATTGATTATAATGCAGAACAAATTGAAGCAGGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGAACTGTCATGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAATCAGGAAGCAGTTGTTaGGAAGGACGAACCACAGTA | + |
Preference number: 5 (lower is better) Translates to: PIIQRRDIARLRSNSKQKSGSSC*EGRTTV Trigger: TACTGTGGTTCGTCCTTCCAAACAACTGCTTCCTGA...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 90 bp | ATATATATGCGCCACTGGTATGGTACACACATAATCTCAAGAACCTaGTCAACAGAGGCAACTGGATGCAACATGATGAATAATATGAAA | + |
Preference number: 5 (lower is better) Translates to: IYMRHWYGTHIISRT*STEATGCNMMNNMK Trigger: TTTCATATTATTCATCATGTTGCATCCAGTTGCCTCTGTTGACCAGGTTCTTGAGATTATGTGTGTACCATACCAGTGGCGCATATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS GCA 90 bp | CGAATGTTGGCTTTATGCAAATCTTCAAGTACTGCAGGGGTTTCCTaGTTCAATTTGTTCTGCATTATAATCAATCCCATAAAATCCATG | + |
Preference number: 5 (lower is better) Translates to: RMLALCKSSSTAGVS*FNLFCIIINPIKSM Trigger: CATGGATTTTATGGGATTGATTATAATGCAGAACAAATTGAAGCAGGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 90 bp | TGCATTCAAATTTGGTTGATTCTCCACAGGAAGAAAGTGAATTTTTaGACAAAACCATACTCTAAATTCATCAGTTGTCCTGAGAAGCAC | + |
Preference number: 5 (lower is better) Translates to: CIQIWLILHRKKVNF*TKPYSKFISCPEKH Trigger: GTGCTTCTCAGGACAACTGATGAATTTAGAGTATGGTTTTGTGCAAAAATTCACTTTCTTCCTGTGGAGAATCAACCAAATTTGAATGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAACTCCATTTCATCTTCTaGACCCTTGTTGATAGTCTT | + |
Preference number: 5 (lower is better) Translates to: PIIQRRDIARLRSNSKQKLHFIF*TLVDSL Trigger: AAGACTATCAACAAGGGTCAAGAAGATGAAATGGAG...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAATCCAACATGCGCTTCTaGTTGTATTACAAACATCTG | + |
Preference number: 5 (lower is better) Translates to: PIIQRRDIARLRSNSKQKSNMRF*LYYKHL Trigger: CAGATGTTTGTAATACAACAAGAAGCGCATGTTGGA...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | GAAAGAAACACATTATTTACCATGCCTTTGAAACTGTGCAGTACTTTCATCAACCTTAGGAACAAGATCTaGAAAATGTTCCAGTATCAC | + |
Preference number: 5 (lower is better) Translates to: ERNTLFTMPLKLCSTFINLRNKI*KMFQYH Trigger: GTGATACTGGAACATTTTCAAGATCTTGTTCCTAAG...GTTGATGAAAGTACTGCACAGTTTCAAAGGCATGGTAAATAATGTGTTTCTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS-3UTR CAA 90 bp | CCCATTATTCAAAGGAGAGACATAGCAAGGTTAAGGTCAAACTCAAAACAAAAAATAGACACGAAGGCATaGATAAGAACAATGATAAGC | + |
Preference number: 5 (lower is better) Translates to: PIIQRRDIARLRSNSKQKIDTKA*IRTMIS Trigger: GCTTATCATTGTTCTTATCAATGCCTTCGTGTCTAT...TTTTTGTTTTGAGTTTGACCTTAACCTTGCTATGTCTCTCCTTTGAATAATGGG 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS TCA 72 bp | CAAGACGGAGAAGAGGAGCGCCCCAGATATAAGGCCTaGAGGTGGTCTCTGTGCCACAAGCTCTTTCCAGGC | + |
Preference number: 6 (lower is better) Translates to: QDGEEERPRYKA*RWSLCHKLFPG Trigger: GCCTGGAAAGAGCTTGTGGCACAGAGACCACCTTCAGGCCTTATATCTGGGGCGCTCCTCTTCTCCGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 90 bp | GGGCCCCCTTCATGTAGGCATCCATCCTCTTCTCACCTAGTGTCCTaGCAACCACACTCATCCGTTGCAAGGCAGAAGAAAATGGAAACT | + |
Preference number: 6 (lower is better) Translates to: GPPSCRHPSSSHLVS*QPHSSVARQKKMET Trigger: AGTTTCCATTTTCTTCTGCCTTGCAACGGATGAGTGTGGTTGCAAGGACACTAGGTGAGAAGAGGATGGATGCCTACATGAAGGGGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 72 bp | ACCGCACATCCCAACAAAGTAGTCTACGTTCTGCAATaGCTCCACCAATTGTGTCTTCTGATCCGGTGCCAT | + |
Preference number: 6 (lower is better) Translates to: TAHPNKVVYVLQ*LHQLCLLIRCH Trigger: ATGGCACCGGATCAGAAGACACAATTGGTGGAGGCATTGCAGAACGTAGACTACTTTGTTGGGATGTGCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 72 bp | GCCACCATGTGCCCTCTTCAAAGCACCACAATCATTTaGACCATCACCGCACATCCCAACAAAGTAGTCTAC | + |
Preference number: 6 (lower is better) Translates to: ATMCPLQSTTII*TITAHPNKVVY Trigger: GTAGACTACTTTGTTGGGATGTGCGGTGATGGTGCAAATGATTGTGGTGCTTTGAAGAGGGCACATGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 90 bp | GCACATCCCAACAAAGTAGTCTACGTTCTGCAATGCCTCCACCAATaGTGTCTTCTGATCCGGTGCCATTCGAGCAAACACAGTACCATG | + |
Preference number: 6 (lower is better) Translates to: AHPNKVVYVLQCLHQ*CLLIRCHSSKHSTM Trigger: CATGGTACTGTGTTTGCTCGAATGGCACCGGATCAGAAGACACAATTGGTGGAGGCATTGCAGAACGTAGACTACTTTGTTGGGATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 90 bp | GCCACTCAGGATCAAAGCGGAGCTCCTGTGCTAAGTACATGTACTTaGCTTTTGGAGTTTTCTTTCTACAGCTCAGGGCCCAGGACAAAC | + |
Preference number: 6 (lower is better) Translates to: ATQDQSGAPVLSTCT*LLEFSFYSSGPRTN Trigger: GTTTGTCCTGGGCCCTGAGCTGTAGAAAGAAAACTCCAAAAGCAAAGTACATGTACTTAGCACAGGAGCTCCGCTTTGATCCTGAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 90 bp | GACTCCTGTGGTGGCTGTGTGGTGCTGAAACGACACTCTCCTTGTTaGTCTCGATTGAATACAACTTTCCAAAGGACCGTGTCAAGGAAG | + |
Preference number: 6 (lower is better) Translates to: DSCGGCVVLKRHSPC*SRLNTTFQRTVSRK Trigger: CTTCCTTGACACGGTCCTTTGGAAAGTTGTATTCAATCGAGACAAACAAGGAGAGTGTCGTTTCAGCACCACACAGCCACCACAGGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS GCA 72 bp | AGTTGTCCTGAGAAGCACCACTTCACAGTCTTTAACTaGAGCTCTAACACATGTGGCTTTCACTCGCCACTC | + |
Preference number: 6 (lower is better) Translates to: SCPEKHHFTVFN*SSNTCGFHSPL Trigger: GAGTGGCGAGTGAAAGCCACATGTGTTAGAGCTGCAGTTAAAGACTGTGAAGTGGTGCTTCTCAGGACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 72 bp | CTGCAATGCCTCCACCAATTGTGTCTTCTGATCCGGTaGCATTCGAGCAAACACAGTACCATGCAACATCAA | + |
Preference number: 6 (lower is better) Translates to: LQCLHQLCLLIR*HSSKHSTMQHQ Trigger: TTGATGTTGCATGGTACTGTGTTTGCTCGAATGGCACCGGATCAGAAGACACAATTGGTGGAGGCATTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 72 bp | GGTGGCTGTGTGGTGCTGAAACGACACTCTCCTTGTTaGTCTCGATTGAATACAACTTTCCAAAGGACCGTG | + |
Preference number: 6 (lower is better) Translates to: GGCVVLKRHSPC*SRLNTTFQRTV Trigger: CACGGTCCTTTGGAAAGTTGTATTCAATCGAGACAAACAAGGAGAGTGTCGTTTCAGCACCACACAGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 90 bp | CCCCACCGATCCACTGACTCCTCCACCGTGATAGACACGAAGGCATaGATAAGAACAATGATAAGCATATATATGCGCCACTGGTATGGT | + |
Preference number: 6 (lower is better) Translates to: PHRSTDSSTVIDTKA*IRTMISIYMRHWYG Trigger: ACCATACCAGTGGCGCATATATATGCTTATCATTGTTCTTATCAATGCCTTCGTGTCTATCACGGTGGAGGAGTCAGTGGATCGGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061350.13 |
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CDS CAA 90 bp | ACAGCCGTCAACATGTTGTCTCCTGTGACCATGACAGTTCGAATGTaGGCTTTATGCAAATCTTCAAGTACTGCAGGGGTTTCCTGCTTC | + |
Preference number: 6 (lower is better) Translates to: TAVNMLSPVTMTVRM*ALCKSSSTAGVSCF Trigger: GAAGCAGGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGAACTGTCATGGTCACAGGAGACAACATGTTGACGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 72 bp | AACAAAGTAGTCTACGTTCTGCAATGCCTCCACCAATaGTGTCTTCTGATCCGGTGCCATTCGAGCAAACAC | + |
Preference number: 6 (lower is better) Translates to: NKVVYVLQCLHQ*CLLIRCHSSKH Trigger: GTGTTTGCTCGAATGGCACCGGATCAGAAGACACAATTGGTGGAGGCATTGCAGAACGTAGACTACTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 72 bp | GATCAAAGCGGAGCTCCTGTGCTAAGTACATGTACTTaGCTTTTGGAGTTTTCTTTCTACAGCTCAGGGCCC | + |
Preference number: 6 (lower is better) Translates to: DQSGAPVLSTCT*LLEFSFYSSGP Trigger: GGGCCCTGAGCTGTAGAAAGAAAACTCCAAAAGCAAAGTACATGTACTTAGCACAGGAGCTCCGCTTTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 72 bp | CTGTGGTGGCTGTGTGGTGCTGAAACGACACTCTCCTaGTTTGTCTCGATTGAATACAACTTTCCAAAGGAC | + |
Preference number: 6 (lower is better) Translates to: LWWLCGAETTLS*FVSIEYNFPKD Trigger: GTCCTTTGGAAAGTTGTATTCAATCGAGACAAACAAGGAGAGTGTCGTTTCAGCACCACACAGCCACCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS TCA 72 bp | TTGGAAGGACGAACCACAGTAGGCATGATCCGGTTATaGAGTGCTGTTTCTTCTTCAGTTGCTTCTTCCAGA | + |
Preference number: 6 (lower is better) Translates to: LEGRTTVGMIRL*SAVSSSVASSR Trigger: TCTGGAAGAAGCAACTGAAGAAGAAACAGCACTTCATAACCGGATCATGCCTACTGTGGTTCGTCCTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 72 bp | AGCTGGAAGTTCAAACAGCTCCATTTCTTGGTTTCCTaGAGTTGTAGGTTCAGGAAGCAGTTGTTTGGAAGG | + |
Preference number: 6 (lower is better) Translates to: SWKFKQLHFLVS*SCRFRKQLFGR Trigger: CCTTCCAAACAACTGCTTCCTGAACCTACAACTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 72 bp | TCTCCTGTGACCATGACAGTTCGAATGTTGGCTTTATaGAAATCTTCAAGTACTGCAGGGGTTTCCTGCTTC | + |
Preference number: 6 (lower is better) Translates to: SPVTMTVRMLAL*KSSSTAGVSCF Trigger: GAAGCAGGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGAACTGTCATGGTCACAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 72 bp | GTGGTGCTGAAACGACACTCTCCTTGTTTGTCTCGATaGAATACAACTTTCCAAAGGACCGTGTCAAGGAAG | + |
Preference number: 6 (lower is better) Translates to: VVLKRHSPCLSR*NTTFQRTVSRK Trigger: CTTCCTTGACACGGTCCTTTGGAAAGTTGTATTCAATCGAGACAAACAAGGAGAGTGTCGTTTCAGCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 90 bp | ACCGTGTCAAGGAAGAAGCTCTCCACCGTGATAGACACGAAGGCATaGATAAGAACAATGATAAGCATATATATGCGCCACTGGTATGGT | + |
Preference number: 6 (lower is better) Translates to: TVSRKKLSTVIDTKA*IRTMISIYMRHWYG Trigger: ACCATACCAGTGGCGCATATATATGCTTATCATTGTTCTTATCAATGCCTTCGTGTCTATCACGGTGGAGAGCTTCTTCCTTGACACGGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 72 bp | TCCACTGACTCCTCCACCGTGATAGACACGAAGGCATaGATAAGAACAATGATAAGCATATATATGCGCCAC | + |
Preference number: 6 (lower is better) Translates to: STDSSTVIDTKA*IRTMISIYMRH Trigger: GTGGCGCATATATATGCTTATCATTGTTCTTATCAATGCCTTCGTGTCTATCACGGTGGAGGAGTCAGTGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061350.13 |
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CDS TCA 72 bp | TTTGGAGGTAATGCTTCAGCAATAATAACTTTATCCTaGGGTAGAATCATCCCACAGTCTCTGGCCACAGAG | + |
Preference number: 6 (lower is better) Translates to: FGGNASAIITLS*GRIIPQSLATE Trigger: CTCTGTGGCCAGAGACTGTGGGATGATTCTACCTCAGGATAAAGTTATTATTGCTGAAGCATTACCTCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 72 bp | GAAAACCACCAGTACAAATCACTCCTACAAAAACCATaGCAAGCTTCCAGCGGCATAAGTTATAGCCATGTA | + |
Preference number: 6 (lower is better) Translates to: ENHQYKSLLQKP*QASSGISYSHV Trigger: TACATGGCTATAACTTATGCCGCTGGAAGCTTGCCATGGTTTTTGTAGGAGTGATTTGTACTGGTGGTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229616.2 |
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CDS CAA 72 bp | AACATGTTGTCTCCTGTGACCATGACAGTTCGAATGTaGGCTTTATGCAAATCTTCAAGTACTGCAGGGGTT | + |
Preference number: 6 (lower is better) Translates to: NMLSPVTMTVRM*ALCKSSSTAGV Trigger: AACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGAACTGTCATGGTCACAGGAGACAACATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 72 bp | GTCACCTCAAGATCCTCTAAACTATCATGGGCAAGTTaGATTGGAATAGCCTCTGAGTCAATGGCTGATGAT | + |
Preference number: 6 (lower is better) Translates to: VTSRSSKLSWAS*IGIASESMADD Trigger: ATCATCAGCCATTGACTCAGAGGCTATTCCAATCAAACTTGCCCATGATAGTTTAGAGGATCTTGAGGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 72 bp | AGGAAGAAGCTCTCCACCGTGATAGACACGAAGGCATaGATAAGAACAATGATAAGCATATATATGCGCCAC | + |
Preference number: 6 (lower is better) Translates to: RKKLSTVIDTKA*IRTMISIYMRH Trigger: GTGGCGCATATATATGCTTATCATTGTTCTTATCAATGCCTTCGTGTCTATCACGGTGGAGAGCTTCTTCCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 72 bp | GGCTTGGGATACAGTATAGAACGAACAAGCTGTCCTTaGGAAGTACTAAATCCTGTTCTAACTACTATGGCT | + |
Preference number: 6 (lower is better) Translates to: GLGYSIERTSCP*EVLNPVLTTMA Trigger: AGCCATAGTAGTTAGAACAGGATTTAGTACTTCCAAAGGACAGCTTGTTCGTTCTATACTGTATCCCAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 90 bp | AATTCCTATCTCATAAATAGCTGGAAGTTCAAACAGCTCCATTTCTaGGTTTCCTGCAGTTGTAGGTTCAGGAAGCAGTTGTTTGGAAGG | + |
Preference number: 6 (lower is better) Translates to: NSYLINSWKFKQLHF*VSCSCRFRKQLFGR Trigger: CCTTCCAAACAACTGCTTCCTGAACCTACAACTGCAGGAAACCAAGAAATGGAGCTGTTTGAACTTCCAGCTATTTATGAGATAGGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS TCA 72 bp | GTTCCAACATGCGCTTCTTGTTGTATTACAAACATCTaGATTTGGATCGCACACTTTATACTGCTTGACCCA | + |
Preference number: 6 (lower is better) Translates to: VPTCASCCITNI*IWIAHFILLDP Trigger: TGGGTCAAGCAGTATAAAGTGTGCGATCCAAATTCAGATGTTTGTAATACAACAAGAAGCGCATGTTGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CCA 72 bp | AAACAAGTAGGCATCTCTATAGAGTTTAAAGTCAGTTaGCTTGGGATACAGTATAGAACGAACAAGCTGTCC | + |
Preference number: 6 (lower is better) Translates to: KQVGISIEFKVS*LGIQYRTNKLS Trigger: GGACAGCTTGTTCGTTCTATACTGTATCCCAAGCCAACTGACTTTAAACTCTATAGAGATGCCTACTTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CAA 90 bp | GTTCAGTCCCATTGTATAAGTGTGACGAGTTCCAACATGCGCTTCTaGTTGTATTACAAACATCTGAATTTGGATCGCACACTTTATACT | + |
Preference number: 6 (lower is better) Translates to: VQSHCISVTSSNMRF*LYYKHLNLDRTLYT Trigger: AGTATAAAGTGTGCGATCCAAATTCAGATGTTTGTAATACAACAAGAAGCGCATGTTGGAACTCGTCACACTTATACAATGGGACTGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS GCA 72 bp | AGTTCGAATGTTGGCTTTATGCAAATCTTCAAGTACTaGAGGGGTTTCCTGCTTCAATTTGTTCTGCATTAT | + |
Preference number: 6 (lower is better) Translates to: SSNVGFMQIFKY*RGFLLQFVLHY Trigger: ATAATGCAGAACAAATTGAAGCAGGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGCCAACATTCGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 72 bp | AAGAACAATGATAAGCATATATATGCGCCACTGGTATaGTACACACATAATCTCAAGAACCTGGTCAACAGA | + |
Preference number: 6 (lower is better) Translates to: KNNDKHIYAPLV*YTHNLKNLVNR Trigger: TCTGTTGACCAGGTTCTTGAGATTATGTGTGTACCATACCAGTGGCGCATATATATGCTTATCATTGTTCTT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 72 bp | TGTATAAGTGTGACGAGTTCCAACATGCGCTTCTTGTaGTATTACAAACATCTGAATTTGGATCGCACACTT | + |
Preference number: 6 (lower is better) Translates to: CISVTSSNMRFL*YYKHLNLDRTL Trigger: AAGTGTGCGATCCAAATTCAGATGTTTGTAATACAACAAGAAGCGCATGTTGGAACTCGTCACACTTATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS CAA 72 bp | CATTGTATAAGTGTGACGAGTTCCAACATGCGCTTCTaGTTGTATTACAAACATCTGAATTTGGATCGCACA | + |
Preference number: 6 (lower is better) Translates to: HCISVTSSNMRF*LYYKHLNLDRT Trigger: TGTGCGATCCAAATTCAGATGTTTGTAATACAACAAGAAGCGCATGTTGGAACTCGTCACACTTATACAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |
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CDS TCA 72 bp | ACAGTACCATGCAACATCAACTTAGGAACAAGATCTTaGAAATGTTCCAGTATCACCGAAAATGACTTTCCA | + |
Preference number: 6 (lower is better) Translates to: TVPCNINLGTRS*KCSSITENDFP Trigger: TGGAAAGTCATTTTCGGTGATACTGGAACATTTTCAAGATCTTGTTCCTAAGTTGATGTTGCATGGTACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS GCA 72 bp | GCTTTATGCAAATCTTCAAGTACTGCAGGGGTTTCCTaGTTCAATTTGTTCTGCATTATAATCAATCCCATA | + |
Preference number: 6 (lower is better) Translates to: ALCKSSSTAGVS*FNLFCIIINPI Trigger: TATGGGATTGATTATAATGCAGAACAAATTGAAGCAGGAAACCCCTGCAGTACTTGAAGATTTGCATAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 |
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CDS CCA 72 bp | TTGATAAGAACAATGATAAGCATATATATGCGCCACTaGTATGGTACACACATAATCTCAAGAACCTGGTCA | + |
Preference number: 6 (lower is better) Translates to: LIRTMISIYMRH*YGTHIISRTWS Trigger: TGACCAGGTTCTTGAGATTATGTGTGTACCATACCAGTGGCGCATATATATGCTTATCATTGTTCTTATCAA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061350.13 ENSMUST00000100013.9 ENSMUST00000229503.2 |