Pregenerated sensors for ATP10D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046808Ensembl transcript IDs: ENSMUST00000094710.8, ENSMUST00000126664.8, ENSMUST00000169617.3
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTCTTTGCCCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATaGCAGAGAGTGACGTCAAACACCTTCAGTCGGGAACCAAAACCT | + |
Preference number: 1 (lower is better) Translates to: FFALPYKGYFSRKLK*QRVTSNTFSREPKP Trigger: AGGTTTTGGTTCCCGACTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGGGCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR GCA 90 bp | AGCAGAAGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTaGCCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACA | + |
Preference number: 1 (lower is better) Translates to: SRRQPGIVENTSLLL*PSLQRLLQQKAEMT Trigger: TGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCTTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR TCA 90 bp | ATCTCAAGGAAGCAGAAGGCAGCTTCGTTTAGACACATGGTTTTGTaGCAGTTCCAGAAATCAGTCTATGTGAAAAGACCATTTAACAAC | + |
Preference number: 1 (lower is better) Translates to: ISRKQKAASFRHMVL*QFQKSVYVKRPFNN Trigger: GTTGTTAAATGGTCTTTTCACATAGACTGATTTCTGGAACTGTCACAAAACCATGTGTCTAAACGAAGCTGCCTTCTGCTTCCTTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR GCA 90 bp | AAAACAACACATTCTCCTGAATTAAATATTCCAGTTCCTAAACTCTaGTCTGGTCAAACACTATCCTTTGTTTACAAATGTGCTCACAGG | + |
Preference number: 1 (lower is better) Translates to: KTTHSPELNIPVPKL*SGQTLSFVYKCAHR Trigger: CCTGTGAGCACATTTGTAAACAAAGGATAGTGTTTGACCAGAGCAGAGTTTAGGAACTGGAATATTTAATTCAGGAGAATGTGTTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACGACAGCATCCATCCGTaGTTTGTCACAGCAGAAACC | + |
Preference number: 2 (lower is better) Translates to: KWRQHPSVICHSRNLATDDSIHP*FVTAET Trigger: GGTTTCTGCTGTGACAAATCACGGATGGATGCTGTC...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR GCA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTAGAACCCAGGAGCTaGTCACACACGGCCTGTAGG | + |
Preference number: 2 (lower is better) Translates to: VSISTHISFCGGHNTDKLLEPRS*SHTACR Trigger: CCTACAGGCCGTGTGTGAGCAGCTCCTGGGTTCTAA...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACGCACTGTTACAACTATaGACTCTCAAGCGGACTCTG | + |
Preference number: 2 (lower is better) Translates to: KWRQHPSVICHSRNLATDALLQL*TLKRTL Trigger: CAGAGTCCGCTTGAGAGTTCATAGTTGTAACAGTGC...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACACATCCTTCCAAACTTaGAGGATTGCCAGCAACTCT | + |
Preference number: 2 (lower is better) Translates to: KWRQHPSVICHSRNLATDTSFQT*RIASNS Trigger: AGAGTTGCTGGCAATCCTTCAAGTTTGGAAGGATGT...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACAGCAGAAAGCTGAAATaGCAGAGAGTGACGTCAAAC | + |
Preference number: 2 (lower is better) Translates to: KWRQHPSVICHSRNLATDSRKLK*QRVTSN Trigger: GTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCT...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCAACATCCTTCCAAACTTaGAGGATTGCCAGCAACTCT | + |
Preference number: 2 (lower is better) Translates to: WRAQHRQTLEHCYNYELSTSFQT*RIASNS Trigger: AGAGTTGCTGGCAATCCTTCAAGTTTGGAAGGATGT...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGGCACTGTTACAACTATaGACTCTCAAGCGGACTCTG | + |
Preference number: 2 (lower is better) Translates to: SISTHISFCGGHNTDKLLALLQL*TLKRTL Trigger: CAGAGTCCGCTTGAGAGTTCATAGTTGTAACAGTGC...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR GCA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATCTAACTTCTGAGAGGTaGTCTTCTACATCCTTCCAA | + |
Preference number: 2 (lower is better) Translates to: METASIRDLSQQKPCYRHLTSER*SSTSFQ Trigger: TTGGAAGGATGTAGAAGAGCACCTCTCAGAAGTTAG...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR GCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACCTAACTTCTGAGAGGTaGTCTTCTACATCCTTCCAA | + |
Preference number: 2 (lower is better) Translates to: KWRQHPSVICHSRNLATDLTSER*SSTSFQ Trigger: TTGGAAGGATGTAGAAGAGCACCTCTCAGAAGTTAG...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CCA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATGCATCAGGGGACCCATaGAGAATACTTAAATACCTA | + |
Preference number: 2 (lower is better) Translates to: METASIRDLSQQKPCYRHASGDP*RILKYL Trigger: TAGGTATTTAAGTATTCTCCATGGGTCCCCTGATGC...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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3UTR CAA 90 bp | GTCACAGCAGAAACCTTGCTACAGACATCTCTACCCTTCAATATGTaGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTG | + |
Preference number: 2 (lower is better) Translates to: VTAETLLQTSLPFNM*IFLRASEIPTENNL Trigger: CAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTCTGTAGCAAGGTTTCTGCTGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCAGTAATCCTAACTTCTaGGAGGTGCTCTTCTACATC | + |
Preference number: 2 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSSNPNF*EVLFYI Trigger: GATGTAGAAGAGCACCTCTCAGAAGTTAGGATTACT...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR GCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGACTAGCCTTCTTCTTTaGCCTTCCCTACAAAGGCTA | + |
Preference number: 2 (lower is better) Translates to: SISTHISFCGGHNTDKLLTSLLL*PSLQRL Trigger: TAGCCTTTGTAGGGAAGGGCAAAGAAGAAGGCTAGT...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CCA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACCCATATCTCATTCTGTaGAGGGCACAACACAGACAA | + |
Preference number: 2 (lower is better) Translates to: DISTLQYVDFSKSLGDSHPYLIL*RAQHRQ Trigger: TTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGG...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCACAAAACCTTCTCTCATaGGAAATAAAAGGCTCTTGG | + |
Preference number: 2 (lower is better) Translates to: WRAQHRQTLEHCYNYELSQNLLS*EIKGSW Trigger: CCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTTTG...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR GCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACAAAGCATTTTTCAAATaGATGGTGAGGCTAATCTGT | + |
Preference number: 2 (lower is better) Translates to: KWRQHPSVICHSRNLATDKAFFK*MVRLIC Trigger: ACAGATTAGCCTCACCATGCATTTGAAAAATGCTTT...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CCA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCCAAAACCTTCTCTCATaGGAAATAAAAGGCTCTTGG | + |
Preference number: 2 (lower is better) Translates to: VSISTHISFCGGHNTDKLQNLLS*EIKGSW Trigger: CCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTTTG...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGCTCTCAAGCGGACTCTaGAAGACTTTCAAAATGATT | + |
Preference number: 2 (lower is better) Translates to: SISTHISFCGGHNTDKLLLSSGL*KTFKMI Trigger: AATCATTTTGAAAGTCTTCCAGAGTCCGCTTGAGAG...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR TCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAAAGTAATCCTAACTTCTaGGAGGTGCTCTTCTACATC | + |
Preference number: 2 (lower is better) Translates to: MLIFLRASEIPTENNLYQSNPNF*EVLFYI Trigger: GATGTAGAAGAGCACCTCTCAGAAGTTAGGATTACT...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR GCA 90 bp | ATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAAAAAGCATTTTTCAAATaGATGGTGAGGCTAATCTGT | + |
Preference number: 2 (lower is better) Translates to: ILWRAQHRQTLEHCYNYEKAFFK*MVRLIC Trigger: ACAGATTAGCCTCACCATGCATTTGAAAAATGCTTT...TTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR TCA 72 bp | CCCAGGAGCTGCTCACACACGGCCTGTAGGCTCAGGTaGTTGTGTTTCATGGCCATTTGTCCGTTTCCTGGT | + |
Preference number: 3 (lower is better) Translates to: PRSCSHTACRLR*LCFMAICPFPG Trigger: ACCAGGAAACGGACAAATGGCCATGAAACACAATCACCTGAGCCTACAGGCCGTGTGTGAGCAGCTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR CCA 72 bp | CACACACGGCCTGTAGGCTCAGGTGATTGTGTTTCATaGCCATTTGTCCGTTTCCTGGTTGACAACATCGGC | + |
Preference number: 3 (lower is better) Translates to: HTRPVGSGDCVS*PFVRFLVDNIG Trigger: GCCGATGTTGTCAACCAGGAAACGGACAAATGGCCATGAAACACAATCACCTGAGCCTACAGGCCGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR TCA 72 bp | ACTTCTGAGAGGTGCTCTTCTACATCCTTCCAAACTTaGAGGATTGCCAGCAACTCTAAGCAGGGTGTCCTG | + |
Preference number: 3 (lower is better) Translates to: TSERCSSTSFQT*RIASNSKQGVL Trigger: CAGGACACCCTGCTTAGAGTTGCTGGCAATCCTTCAAGTTTGGAAGGATGTAGAAGAGCACCTCTCAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | CCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCTCCAAACTTGAAGGATaGCCAGCAACTCTAAGCAGG | + |
Preference number: 3 (lower is better) Translates to: PSLQRLLQQKAEMTESDVSKLEG*PATLSR Trigger: CCTGCTTAGAGTTGCTGGCAATCCTTCAAGTTTGGA...GACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACGGCAGCCTGGGATTGTaGAAAACACTAGCCTTCTTC | + |
Preference number: 3 (lower is better) Translates to: KWRQHPSVICHSRNLATDGSLGL*KTLAFF Trigger: GAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCC...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAATACATCCTTCCAAACTaGAAGGATTGCCAGCAACTC | + |
Preference number: 3 (lower is better) Translates to: RQPGIVENTSLLLCPSLQYILPN*KDCQQL Trigger: GAGTTGCTGGCAATCCTTCAAGTTTGGAAGGATGTA...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGTTATGTTCACTCCCATaGCATCAGGGGACCCATGGA | + |
Preference number: 3 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMLCSLP*HQGTHG Trigger: TCCATGGGTCCCCTGATGCAATGGGAGTGAACATAA...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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3UTR TCA 72 bp | CTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATaGCAGAGAGTGACGTCAAACACCTTCAGTCGGGAA | + |
Preference number: 3 (lower is better) Translates to: LPYKGYFSRKLK*QRVTSNTFSRE Trigger: TTCCCGACTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR GCA 72 bp | CAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTaGCCTTCCCTACAAAGGCTACTTCAGCAGAAAGCT | + |
Preference number: 3 (lower is better) Translates to: QPGIVENTSLLL*PSLQRLLQQKA Trigger: AGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGTACATCCTTCCAAACTaGAAGGATTGCCAGCAACTC | + |
Preference number: 3 (lower is better) Translates to: RLLQQKAEMTESDVKHLQYILPN*KDCQQL Trigger: GAGTTGCTGGCAATCCTTCAAGTTTGGAAGGATGTA...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCGAAGGCAGCCTGGGATaGTTGAAAACACTAGCCTTC | + |
Preference number: 3 (lower is better) Translates to: VSISTHISFCGGHNTDKLEGSLG*LKTLAF Trigger: GAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCTTC...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | CCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCGGAAATAAAAGGCTCTaGGGAATTTGTCCTCAAAAA | + |
Preference number: 3 (lower is better) Translates to: PSLQRLLQQKAEMTESDVGNKRL*GICPQK Trigger: TTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCC...GACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGGTCAAACACTATCCTTaGTTTACAAATGTGCTCACA | + |
Preference number: 3 (lower is better) Translates to: RLLQQKAEMTESDVKHLQVKHYP*FTNVLT Trigger: TGTGAGCACATTTGTAAACAAAGGATAGTGTTTGAC...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGGGAAATAAAAGGCTCTaGGGAATTTGTCCTCAAAAA | + |
Preference number: 3 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMGNKRL*GICPQK Trigger: TTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCC...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR-3UTR CAA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTATCCAAACTTGAAGGATaGCCAGCAACTCTAAGCAGG | + |
Preference number: 3 (lower is better) Translates to: KPSLMGNKRLLGICPQKLSKLEG*PATLSR Trigger: CCTGCTTAGAGTTGCTGGCAATCCTTCAAGTTTGGA...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR GCA 72 bp | CTGCTCTGGTCAAACACTATCCTTTGTTTACAAATGTaGTCACAGGTATACAATGATAGAGAGGTTCTTGGT | + |
Preference number: 3 (lower is better) Translates to: LLWSNTILCLQM*SQVYNDREVLG Trigger: ACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAGGATAGTGTTTGACCAGAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR TCA 72 bp | ACATGGTTTTGTGACAGTTCCAGAAATCAGTCTATGTaGAAAGACCATTTAACAACGATACCAGGAAGGTAC | + |
Preference number: 3 (lower is better) Translates to: TWFCDSSRNQSM*KDHLTTIPGRY Trigger: GTACCTTCCTGGTATCGTTGTTAAATGGTCTTTTCACATAGACTGATTTCTGGAACTGTCACAAAACCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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3UTR GCA 72 bp | CATTCTCCTGAATTAAATATTCCAGTTCCTAAACTCTaGTCTGGTCAAACACTATCCTTTGTTTACAAATGT | + |
Preference number: 3 (lower is better) Translates to: HSPELNIPVPKL*SGQTLSFVYKC Trigger: ACATTTGTAAACAAAGGATAGTGTTTGACCAGAGCAGAGTTTAGGAACTGGAATATTTAATTCAGGAGAATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTAACTGTCCTGCAGCCCTaGGCTCTGGGTCTCGCCATG | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLTVLQP*ALGLAM Trigger: CATGGCGAGACCCAGAGCCCAGGGCTGCAGGACAGT...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGGTGCTCCCGGAGAGCTaGGCCGAGGGCTTTCCCAGA | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQVLPES*AEGFPR Trigger: TCTGGGAAAGCCCTCGGCTCAGCTCTCCGGGAGCAC...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGCACTGGGAACTGTCCTaGAGCCCTGGGCTCTGGGTC | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQHWELS*SPGLWV Trigger: GACCCAGAGCCCAGGGCTGCAGGACAGTTCCCAGTG...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTACTCTCATCTTCACCCTaGGCTCTCCCATGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLLSSSP*ALPWLS Trigger: GCTGAGCCATGGGAGAGCCCAGGGTGAAGATGAGAG...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAAGCTTTCCTGCAGGTCTaGGGGTCCTCGAGGACTTGC | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQAFLQV*GSSRTC Trigger: GCAAGTCCTCGAGGACCCCCAGACCTGCAGGAAAGC...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTACCGCTCATCCCAGCATaGTGTTACCTCGGATCCCAA | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLPLIPA*CYLGSQ Trigger: TTGGGATCCGAGGTAACACCATGCTGGGATGAGCGG...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTACCTCGGATCCCAAAGTaGCAAAAGAGAACGGAGCAG | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLPRIPK*QKRTEQ Trigger: CTGCTCCGTTCTCTTTTGGCACTTTGGGATCCGAGG...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCGACGCGGTGCTTTCCTaGAGGTCTGGGGGTCCTCGA | + |
Preference number: 4 (lower is better) Translates to: VSISTHISFCGGHNTDKLDAVLS*RSGGPR Trigger: TCGAGGACCCCCAGACCTGCAGGAAAGCACCGCGTC...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGGGAATAACGACGCGGTaGTTTCCTGCAGGTCTGGGG | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQGITTR*FPAGLG Trigger: CCCCAGACCTGCAGGAAAGCACCGCGTCGTTATTCC...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAAGCATACTCGTCCAGGTaGCTCTGCGTTCTCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQAYSSR*LCVLSL Trigger: AAGGGAGAGAACGCAGAGGCACCTGGACGAGTATGC...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTAAGGGTGGGTTGCAAGTaGCACATAAGGCTCCAAAAG | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLRVGCK*HIRLQK Trigger: CTTTTGGAGCCTTATGTGTCACTTGCAACCCACCCT...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACCAGCCTCTGTGTTTCTaGTGGTGCACCCGCGGAGCA | + |
Preference number: 4 (lower is better) Translates to: DISTLQYVDFSKSLGDSHQPLCF*WCTRGA Trigger: TGCTCCGCGGGTGCACCATCAGAAACACAGAGGCTG...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTAGGACCTGCAGCAAGATaGTCATGGTCCAGAACACAT | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLGPAAR*SWSRTH Trigger: ATGTGTTCTGGACCATGATCATCTTGCTGCAGGTCC...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAAAGTCCAGTGAGCAGCTaGGGGGTAAGCTGGCTAAAT | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQSPVSS*GVSWLN Trigger: ATTTAGCCAGCTTACCCCTCAGCTGCTCACTGGACT...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAAGGGGATTCCCAAAGGTaGAGATGTCAATGTCAGAGC | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQGDSQR*RCQCQS Trigger: GCTCTGACATTGACATCTTCACCTTTGGGAATCCCC...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATTCAGCATCCAGATCTTaGTGCCAGCTTGGTGAAGGG | + |
Preference number: 4 (lower is better) Translates to: METASIRDLSQQKPCYRHSASRS*CQLGEG Trigger: CCCTTCACCAAGCTGGCATCAAGATCTGGATGCTGA...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CGTGATTTGTCACAGCAGAAACCTTGCTACAGACATCTCTACCCTTCAATATGTGCCTGCATGCCTTCTTaGCCTGAGACACCGATCCCA | + |
Preference number: 4 (lower is better) Translates to: RDLSQQKPCYRHLYPSICACMPS*PETPIP Trigger: TGGGATCGGTGTCTCAGGTCAAGAAGGCATGCAGGC...ACATATTGAAGGGTAGAGATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCCATGCCAGCAGCAGCTCAGTCATaGCCAAGACGCAGGGAGACC | + |
Preference number: 4 (lower is better) Translates to: QMCSQVYNDREVLGFSMPAAAQS*PRRRET Trigger: GGTCTCCCTGCGTCTTGGGCATGACTGAGCTGCTGC...TGGCATGGAAAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCGAGAGTCCAATCTTTTaGCGAGGTTGGTTCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: PSLQRLLQQKAEMTESDVESPIF*RGWFGA Trigger: TGCACCGAACCAACCTCGGCAAAAGATTGGACTCTC...GACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAAATCTTTTGCCGAGGTTaGTTCGGTGCAGAAACCACC | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQIFCRG*FGAETT Trigger: GGTGGTTTCTGCACCGAACCAACCTCGGCAAAAGAT...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGGGGGATTCCCAAAGGTaGAGATGTCAATGTCAGAGC | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQGDSQR*RCQCQS Trigger: GCTCTGACATTGACATCTTCACCTTTGGGAATCCCC...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAGTAGACACTGTTGCTaGCTTCATTGCAAGGACAGC | + |
Preference number: 4 (lower is better) Translates to: PSLQRLLQQKAEMTESDVSRHCC*LHCKDS Trigger: GCTGTCCTTGCAATGAAGTCAGCAACAGTGTCTACT...GACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGCCAGAGGCAGCATGGTaGTTTCCTTTTGGAAGGCTT | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQPEAAW*FPFGRL Trigger: AAGCCTTCCAAAAGGAAATCACCATGCTGCCTCTGG...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCAGCCATATGCCGTaGCCCAGTGCACCAGTTAAG | + |
Preference number: 4 (lower is better) Translates to: ILWRAQHRQTLEHCYNYELSHMP*PSAPVK Trigger: CTTAACTGGTGCACTGGGTCACGGCATATGGCTGAG...TTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAATCCAGTCAGCACGGGTaGGATGACACGTCCATCCGG | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQSSQHG*DDTSIR Trigger: CCGGATGGACGTGTCATCTCACCCGTGCTGACTGGA...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACCTGCAGGAGGGTCTCTaGCGAAACATCTTTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: KWRQHPSVICHSRNLATDLQEGL*RNIFLQ Trigger: TTGGAGAAAGATGTTTCGGCAGAGACCCTCCTGCAG...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CCAAAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTCCTACAGCAGAGGTaGTCCCGGAGAGCTGAGCCG | + |
Preference number: 4 (lower is better) Translates to: PKPSLMGNKRLLGICPQKFLQQR*SRRAEP Trigger: CGGCTCAGCTCTCCGGGAGCACCTCTGCTGTAGGAA...TTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | ATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTTTGCAGACTCTCCTaGAGGGCAAACTCCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: ILWRAQHRQTLEHCYNYELCRLS*RANSRV Trigger: GACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAG...TTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGTCAAGGAACTGCCTTTaGAGACTCTCCTGCAGGGCA | + |
Preference number: 4 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMSRNCL*RLSCRA Trigger: TGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGA...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCGTCAGCTCAAGGAACTaGCTTTGCAGACTCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSVSSRN*LCRLSC Trigger: GCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGAC...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAAACCGTGACCAGCATGTaGATCCAAGTCAAACTCTTG | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQTVTSM*IQVKLL Trigger: CAAGAGTTTGACTTGGATCCACATGCTGGTCACGGT...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCATGGCACCGTCACCAATaGCTAGGGTCATCACATGGA | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSWHRHQ*LGSSHG Trigger: TCCATGTGATGACCCTAGCCATTGGTGACGGTGCCA...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAGCCTCGGAATCGGCTaGGGTCATTGTTTGGACTTT | + |
Preference number: 4 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMSLGIG*GHCLDF Trigger: AAAGTCCAAACAATGACCTCAGCCGATTCCGAGGCT...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATCACCAGTTAAGCACATaGCAATCAGAAGCAGGACAC | + |
Preference number: 4 (lower is better) Translates to: METASIRDLSQQKPCYRHHQLST*QSEAGH Trigger: GTGTCCTGCTTCTGATTGTCATGTGCTTAACTGGTG...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACCATGCCTTCTTGACCTaGGACACCGATCCCAATGTC | + |
Preference number: 4 (lower is better) Translates to: DISTLQYVDFSKSLGDSHHAFLT*DTDPNV Trigger: GACATTGGGATCGGTGTCTCAGGTCAAGAAGGCATG...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTATCCAAGTCAAACTCTTaGTTTCAATCACCAGGTGGA | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLSKSNS*FQSPGG Trigger: TCCACCTGGTGATTGAAAGCAAGAGTTTGACTTGGA...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGCGCCGAGAGTGTCTGTaGATTCCTCCTCTTCAGAGA | + |
Preference number: 4 (lower is better) Translates to: SISTHISFCGGHNTDKLLRRECL*IPPLQR Trigger: TCTCTGAAGAGGAGGAATGCACAGACACTCTCGGCG...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCAGCCTGGGATTGTTGAAAACACTAGCCTTCTTCTTTGCCCTTCCCTACAATGCCATCTGGGTCTGTaGAAAAGAGTAAGACCATGT | + |
Preference number: 4 (lower is better) Translates to: RQPGIVENTSLLLCPSLQCHLGL*KRVRPC Trigger: ACATGGTCTTACTCTTTTCCACAGACCCAGATGGCA...TTGTAGGGAAGGGCAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATACACATAGAGAGAAATaGGGATCAGGACCTGCAGCA | + |
Preference number: 4 (lower is better) Translates to: METASIRDLSQQKPCYRHTHREK*GSGPAA Trigger: TGCTGCAGGTCCTGATCCCCATTTCTCTCTATGTGT...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | ATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAATGCAACGGTAAGCTCTaGCGGCATACACCAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: ILWRAQHRQTLEHCYNYECNGKL*RHTPKL Trigger: CAGCTTTGGTGTATGCCGCCAGAGCTTACCGTTGCA...TTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCAAGTAGACACTGTTGCTaGCTTCATTGCAAGGACAGC | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSSRHCC*LHCKDS Trigger: GCTGTCCTTGCAATGAAGTCAGCAACAGTGTCTACT...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATTTCAGGGCTCGGCACTaGATGGTAGAATCCATTTTC | + |
Preference number: 4 (lower is better) Translates to: LILWRAQHRQTLEHCYNYFRARH*MVESIF Trigger: GAAAATGGATTCTACCATTCAGTGCCGAGCCCTGAA...ATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTGCCCAAGGTCCTCAGTaGTGTTCAGGGCTCGGCACT | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFAQGPQ*CSGLGT Trigger: AGTGCCGAGCCCTGAACATCACTGAGGACCTTGGGC...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAAATCCCACAGGCATCCTaGCTCTGTGTATTGAGGATG | + |
Preference number: 4 (lower is better) Translates to: ILWRAQHRQTLEHCYNYEIPQAS*LCVLRM Trigger: CATCCTCAATACACAGAGTCAGGATGCCTGTGGGAT...TTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGGTCTCACGTGTGCTCTaGTCAACAGTAGACACTGTT | + |
Preference number: 4 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMVSRVL*STVDTV Trigger: AACAGTGTCTACTGTTGAGCAGAGCACACGTGAGAC...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CGTGATTTGTCACAGCAGAAACCTTGCTACAGACATCTCTACCCTTCAATATGTGCCTCTGCTTTAAATTaGTCTCTCCATCAAGGCCGG | + |
Preference number: 4 (lower is better) Translates to: RDLSQQKPCYRHLYPSICASALN*SLHQGR Trigger: CCGGCCTTGATGGAGAGAGCAATTTAAAGCAGAGGC...ACATATTGAAGGGTAGAGATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCCACCGTGTTGCAAATTaGCAGTGCAATAAAGAAGTC | + |
Preference number: 4 (lower is better) Translates to: PSLQRLLQQKAEMTESDVHRVAN*QCNKEV Trigger: GACTTCTTTATTGCACTGGCAATTTGCAACACGGTG...GACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGTCGTCCAGGTGCCTCTaGGTTCTCTCCCTTATTATC | + |
Preference number: 4 (lower is better) Translates to: SISTHISFCGGHNTDKLLSSRCL*VLSLII Trigger: GATAATAAGGGAGAGAACGCAGAGGCACCTGGACGA...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATTCCTCAGCCACTCTaGATATTCCGTGTCACTCAT | + |
Preference number: 4 (lower is better) Translates to: KWRQHPSVICHSRNLATDIPQPL*IFRVTH Trigger: ATGAGTGACACGGAATATGCAGAGTGGCTGAGGAAT...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTAGACGCCAGTGATGTCTaGCCCACTGCAGCAGCTCAG | + |
Preference number: 4 (lower is better) Translates to: KPSLMGNKRLLGICPQKLDASDV*PTAAAQ Trigger: CTGAGCTGCTGCAGTGGGCCAGACATCACTGGCGTC...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATCCACACGTTCTTTATTaGCATGTTCCAGGAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: LILWRAQHRQTLEHCYNYPHVLY*HVPGSL Trigger: GAGGCTTCCTGGAACATGCCAATAAAGAACGTGTGG...ATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGGCTAGGGTCATCACATaGAGATGGTTTCGAACCAAT | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQARVIT*RWFRTN Trigger: ATTGGTTCGAAACCATCTCCATGTGATGACCCTAGC...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACAATAGAGAATCATGTTaGAGAGCCGGGTGTAACACC | + |
Preference number: 4 (lower is better) Translates to: KWRQHPSVICHSRNLATDNRESC*RAGCNT Trigger: GGTGTTACACCCGGCTCTCCAACATGATTCTCTATT...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CATTTGTCCGTTTCCTGGTTGACAACATCGGCACATAGGGAGTCTCTGCGTCTAAACCCACAAAAGAACTaGTACCAGAAAAGGAGATTC | + |
Preference number: 4 (lower is better) Translates to: HLSVSWLTTSAHRESLRLNPQKN*YQKRRF Trigger: GAATCTCCTTTTCTGGTACCAGTTCTTTTGTGGGTT...TAGACGCAGAGACTCCCTATGTGCCGATGTTGTCAACCAGGAAACGGACAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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3UTR CAA 72 bp | ATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTaGAGCACTGTTACAACTATGAACTCTCAAGCGGAC | + |
Preference number: 4 (lower is better) Translates to: ISFCGGHNTDKL*STVTTMNSQAD Trigger: GTCCGCTTGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGTCAGAAAAGAGGTATTaGATCTGCCCAAGGTCCTCA | + |
Preference number: 4 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMSEKRY*ICPRSS Trigger: TGAGGACCTTGGGCAGATTCAATACCTCTTTTCTGA...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCAATGCATAAGCTATGTTaGCAGCTGTCTCCTGCTTGT | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSMHKLC*QLSPAC Trigger: ACAAGCAGGAGACAGCTGTCAACATAGCTTATGCAT...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCCATGCCACTGCAGGAGGGTCTCTaGCGAAACATCTTTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: QMCSQVYNDREVLGFSMPLQEGL*RNIFLQ Trigger: TTGGAGAAAGATGTTTCGGCAGAGACCCTCCTGCAG...TGGCATGGAAAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGCTTTCAATCACCAGGTaGAGGAGAATGATGAACAGA | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQLSITR*RRMMNR Trigger: TCTGTTCATCATTCTCCTCCACCTGGTGATTGAAAG...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAACCGGAAGTCTCAATGTaGCAGATGCCATCTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQPEVSM*QMPSGS Trigger: AGACCCAGATGGCATCTGCCACATTGAGACTTCCGG...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCAGGGATTTCATCCATTTaGGAAGACTCGTCCTCCATA | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSGISSI*EDSSSI Trigger: TATGGAGGACGAGTCTTCCCAAATGGATGAAATCCC...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGCAAAGTACTTGGCTCTaGGAACTGGAGATGGAAACA | + |
Preference number: 4 (lower is better) Translates to: SISTHISFCGGHNTDKLLQSTWL*ELEMET Trigger: TGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTG...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTAAGTCCACCATGACCTaGTCTGGGGTCCGAGACTGT | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFKSTMT*SGVRDC Trigger: ACAGTCTCGGACCCCAGAGCAGGTCATGGTGGACTT...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCAATGGTGATTTCCTTTTaGAAGGCTTCTACCAAAGGC | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSMVISF*KASTKG Trigger: GCCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCAT...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGATTTGTCTAAAAGTCTaGTATCTGGTACCACGTCTG | + |
Preference number: 4 (lower is better) Translates to: RLLQQKAEMTESDVKHLQICLKV*YLVPRL Trigger: CAGACGTGGTACCAGATACCAGACTTTTAGACAAAT...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCACCCTGTTGTCAATGCTaGTTTCAGCTAGAAAGTGAT | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSPCCQC*FQLESD Trigger: ATCACTTTCTAGCTGAAACCAGCATTGACAACAGGG...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAAGAAGAGCTTGTCATCTaGCTCCAGGAGTTTGCATGC | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQEELVI*LQEFAC Trigger: GCATGCAAACTCCTGGAGCCAGATGACAAGCTCTTC...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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3UTR CAA 72 bp | GAAACCTTGCTACAGACATCTCTACCCTTCAATATGTaGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAG | + |
Preference number: 4 (lower is better) Translates to: ETLLQTSLPFNM*IFLRASEIPTE Trigger: CTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTCTGTAGCAAGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAAGTTTCAGCTAGAAAGTaGTTCCTCAGCCACTCTGCA | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQVSARK*FLSHSA Trigger: TGCAGAGTGGCTGAGGAATCACTTTCTAGCTGAAAC...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAATTGATGCCAGCTTGGTaGAGGGCTTCTATAGACTCA | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQLMPAW*RASIDS Trigger: TGAGTCTATAGAAGCCCTTCACCAAGCTGGCATCAA...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | TTCAGGTTGGATTTTCCTAAAGCATTTTTCAAATGCATGGTGAGGCTAATCTGTCACGTGATTGACCTTTaGTGTCCCTCTCCACCTCTT | + |
Preference number: 4 (lower is better) Translates to: FRLDFPKAFFKCMVRLICHVIDL*CPSPPL Trigger: AAGAGGTGGAGAGGGACAGCAAAGGTCAATCACGTG...ACAGATTAGCCTCACCATGCATTTGAAAAATGCTTTAGGAAAATCCAACCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094710.8 |
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CDS-3UTR GCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAAGTCTCACGTGTGCTCTaGTCAACAGTAGACACTGTT | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQVSRVL*STVDTV Trigger: AACAGTGTCTACTGTTGAGCAGAGCACACGTGAGAC...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTTCACATTCTATCCTaGTGGAGAACTTCTCCGGAT | + |
Preference number: 4 (lower is better) Translates to: VSISTHISFCGGHNTDKLFHILS*WRTSPD Trigger: ATCCGGAGAAGTTCTCCAGCAGGATAGAATGTGAAA...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAATTCTCTCTAACTTACTaGGCTTATACCGTGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQFSLTY*AYTVAH Trigger: GTGGGCCACGGTATAAGCGCAGTAAGTTAGAGAGAA...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCCATGCCACCTCCCTGTTGTCAATaGTGGTTTCAGCTAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: QMCSQVYNDREVLGFSMPPPCCQ*WFQLES Trigger: ACTTTCTAGCTGAAACCAGCATTGACAACAGGGAGG...TGGCATGGAAAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTCCATCACAGCCTGCATaGCTTCTTGACCTGAGACAC | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFPSQPA*LLDLRH Trigger: GTGTCTCAGGTCAAGAAGGCATGCAGGCTGTGATGG...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCTGTTCAGCATTGCTTTaGTTTCATGACCTGCATAGA | + |
Preference number: 4 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSCSALL*FHDLHR Trigger: TCTATGCAGGTCATGAAACCAAAGCAATGCTGAACA...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTAGGGTGGGTTGCAAGTaGCACATAAGGCTCCAAAAG | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFRVGCK*HIRLQK Trigger: CTTTTGGAGCCTTATGTGTCACTTGCAACCCACCCT...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGTGTCATAGATGTTCCTaGAAACCCACAAAAGAACTG | + |
Preference number: 4 (lower is better) Translates to: SISTHISFCGGHNTDKLLCHRCS*KPTKEL Trigger: CAGTTCTTTTGTGGGTTTTCAGGAACATCTATGACA...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCAGTTGCAAATTGCCAGTaGAATAAAGAAGTCCATGAT | + |
Preference number: 4 (lower is better) Translates to: WRAQHRQTLEHCYNYELSVANCQ*NKEVHD Trigger: ATCATGGACTTCTTTATTGCACTGGCAATTTGCAAC...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | ATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAAAAGTTCTTCCAAAATTaGACTCATCAGCATCCCACA | + |
Preference number: 4 (lower is better) Translates to: ILWRAQHRQTLEHCYNYEKFFQN*THQHPT Trigger: TGTGGGATGCTGATGAGTGCAATTTTGGAAGAACTT...TTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCTGTTTTCTAGTCTCATaGCAGATTCAACTAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSCFLVS*QIQLAV Trigger: AACTGCTAGTTGAATCTGCCATGAGACTAGAAAACA...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR TCA 90 bp | CAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCCATGCCAATAAATTCTCTTTGCTaGGGCCCACACGTTCTTTAT | + |
Preference number: 4 (lower is better) Translates to: QMCSQVYNDREVLGFSMPINSLC*GPHVLY Trigger: ATAAAGAACGTGTGGGCCTCAGCAAAGAGAATTTAT...TGGCATGGAAAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCTCAATGTGGCAGATaGCATCTGGGTCTGTGGAAA | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFSQCGR*HLGLWK Trigger: TTTCCACAGACCCAGATGGCATCTGCCACATTGAGA...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTATACGGCCCTGTTTTGTaGCTCTGTTTCTGTACAGCA | + |
Preference number: 4 (lower is better) Translates to: KPSLMGNKRLLGICPQKLYGPVL*LCFCTA Trigger: TGCTGTACAGAAACAGAGGCACAAAACAGGGCCGTA...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTACCGTGACCAGCATGTaGATCCAAGTCAAACTCTTG | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFTVTSM*IQVKLL Trigger: CAAGAGTTTGACTTGGATCCACATGCTGGTCACGGT...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTATCTGAGAACTGGAGATaGAAACACGGATCCCTGAAG | + |
Preference number: 4 (lower is better) Translates to: KPSLMGNKRLLGICPQKLSENWR*KHGSLK Trigger: CTTCAGGGATCCGTGTTTCCATCTCCAGTTCTCAGA...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCAGGAGTGTGTACTTaGTCGTCCGTATCCGGTTAT | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFSGVCT*SSVSGY Trigger: ATAACCGGATACGGACGACCAAGTACACACTCCTGA...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | CAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCCATGCCAGCTGAGGTCATTGTTTaGACTTTCACATTCTATCCT | + |
Preference number: 4 (lower is better) Translates to: QMCSQVYNDREVLGFSMPAEVIV*TFTFYP Trigger: AGGATAGAATGTGAAAGTCCAAACAATGACCTCAGC...TGGCATGGAAAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | ATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGAGAATAACCTGTATCAAGTCATCACATGGAGATaGTTTCGAACCAATTTCACC | + |
Preference number: 4 (lower is better) Translates to: MLIFLRASEIPTENNLYQVITWR*FRTNFT Trigger: GGTGAAATTGGTTCGAAACCATCTCCATGTGATGAC...TTGATACAGGTTATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAATCAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTACACATTCTATCCTGCTaGAGAACTTCTCCGGATCAA | + |
Preference number: 4 (lower is better) Translates to: KPSLMGNKRLLGICPQKLHILSC*RTSPDQ Trigger: TTGATCCGGAGAAGTTCTCCAGCAGGATAGAATGTG...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTTCCAAGTCAAACTCTTaGTTTCAATCACCAGGTGGA | + |
Preference number: 4 (lower is better) Translates to: LCLQMCSQVYNDREVLGFSKSNS*FQSPGG Trigger: TCCACCTGGTGATTGAAAGCAAGAGTTTGACTTGGA...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR GCA 90 bp | CCAAAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAACAAGCCATCTTTAATTaGAATAATTGTGAGGACCAC | + |
Preference number: 4 (lower is better) Translates to: PKPSLMGNKRLLGICPQKQAIFN*NNCEDH Trigger: GTGGTCCTCACAATTATTGCAATTAAAGATGGCTTG...TTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTACTTTCAATCACCAGGTaGAGGAGAATGATGAACAGA | + |
Preference number: 4 (lower is better) Translates to: KPSLMGNKRLLGICPQKLLSITR*RRMMNR Trigger: TCTGTTCATCATTCTCCTCCACCTGGTGATTGAAAG...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CCA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTACGGACGGACAATTTCTaGAAGATGTTTTTAATCTCT | + |
Preference number: 4 (lower is better) Translates to: KPSLMGNKRLLGICPQKLRTDNF*KMFLIS Trigger: AGAGATTAAAAACATCTTCCAGAAATTGTCCGTCCG...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | TGGGAACTGTCCTGCAGCCCTGGGCTCTGGGTCTCGCCATGTTGCTaGGGGAGCCGCCGAGAGTGTCTGTGCATTCCTCCTCTTCAGAGA | + |
Preference number: 5 (lower is better) Translates to: WELSCSPGLWVSPCC*GSRRECLCIPPLQR Trigger: TCTCTGAAGAGGAGGAATGCACAGACACTCTCGGCGGCTCCCTCAGCAACATGGCGAGACCCAGAGCCCAGGGCTGCAGGACAGTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | CCAGATCCTTCTCCATTTCCTACAGCAGAGGTGCTCCCGGAGAGCTaGGCCGAGGGCTTTCCCAGAGGCCCACTGGGAACTGTCCTGCAG | + |
Preference number: 5 (lower is better) Translates to: PDPSPFPTAEVLPES*AEGFPRGPLGTVLQ Trigger: CTGCAGGACAGTTCCCAGTGGGCCTCTGGGAAAGCCCTCGGCTCAGCTCTCCGGGAGCACCTCTGCTGTAGGAAATGGAGAAGGATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | CGGCAGCAGATCACAGCTTGGCACCACGCGGTCAGCTCAAGGAACTaGCTTTGCAGACTCTCCTGCAGGGCAAACTCCAGGGTCTTCCCA | + |
Preference number: 5 (lower is better) Translates to: RQQITAWHHAVSSRN*LCRLSCRANSRVFP Trigger: TGGGAAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCAAGCTGTGATCTGCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | TCCCGGGCCGCTCATCCCAGCATGGTGTTACCTCGGATCCCAAAGTaGCAAAAGAGAACGGAGCAGAGATCCAAAGGGCGGGGAGAGTTA | + |
Preference number: 5 (lower is better) Translates to: SRAAHPSMVLPRIPK*QKRTEQRSKGRGEL Trigger: TAACTCTCCCCGCCCTTTGGATCTCTGCTCCGTTCTCTTTTGGCACTTTGGGATCCGAGGTAACACCATGCTGGGATGAGCGGCCCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |
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CDS GCA 90 bp | TGGCACCACGCGGTCAGCTCAAGGAACTGCCTTTGCAGACTCTCCTaGAGGGCAAACTCCAGGGTCTTCCCAGTGATAACAAGTCCCGCA | + |
Preference number: 5 (lower is better) Translates to: WHHAVSSRNCLCRLS*RANSRVFPVITSPA Trigger: TGCGGGACTTGTTATCACTGGGAAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | CAGATCACAGCTTGGCACCACGCGGTCAGCTCAAGGAACTGCCTTTaGAGACTCTCCTGCAGGGCAAACTCCAGGGTCTTCCCAGTGATA | + |
Preference number: 5 (lower is better) Translates to: QITAWHHAVSSRNCL*RLSCRANSRVFPVI Trigger: TATCACTGGGAAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCAAGCTGTGATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | ACCACGTCTGTTTCCATGGGACTACTGAAGGCGGCCTGTCTGGAATaGGGCACTTCCCCAGATCCTTCTCCATTTCCTACAGCAGAGGTG | + |
Preference number: 5 (lower is better) Translates to: TTSVSMGLLKAACLE*GTSPDPSPFPTAEV Trigger: CACCTCTGCTGTAGGAAATGGAGAAGGATCTGGGGAAGTGCCTCATTCCAGACAGGCCGCCTTCAGTAGTCCCATGGAAACAGACGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | CCAGGTTCAGAGCAGCCACGGTCTAGCGCAGTCTCACGTGTGCTCTaGTCAACAGTAGACACTGTTGCTGACTTCATTGCAAGGACAGCA | + |
Preference number: 5 (lower is better) Translates to: PGSEQPRSSAVSRVL*STVDTVADFIARTA Trigger: TGCTGTCCTTGCAATGAAGTCAGCAACAGTGTCTACTGTTGAGCAGAGCACACGTGAGACTGCGCTAGACCGTGGCTGCTCTGAACCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS CCA 90 bp | TGCTCACAAAGGCACAGGGAGTCCCAGAGGATGAATCCTTCCCACTaGCAAGGGACGGTGAACTTGATCTCCGGACGGACAATTTCTGGA | + |
Preference number: 5 (lower is better) Translates to: CSQRHRESQRMNPSH*QGTVNLISGRTISG Trigger: TCCAGAAATTGTCCGTCCGGAGATCAAGTTCACCGTCCCTTGCCAGTGGGAAGGATTCATCCTCTGGGACTCCCTGTGCCTTTGTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | TGCCAGTGCAATAAAGAAGTCCATGATGTACAAAGTCTCCAGCGGTaGACTCTGAGCGGTGCCATCCAGTCCAGTGAGCAGCTGAGGGGT | + |
Preference number: 5 (lower is better) Translates to: CQCNKEVHDVQSLQR*TLSGAIQSSEQLRG Trigger: ACCCCTCAGCTGCTCACTGGACTGGATGGCACCGCTCAGAGTTCACCGCTGGAGACTTTGTACATCATGGACTTCTTTATTGCACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 90 bp | ATGGGCATTCCACCCAGTGAGGAGAGTCCAATCTTTTGCCGAGGTTaGTTCGGTGCAGAAACCACCACCGTGTTGCAAATTGCCAGTGCA | + |
Preference number: 5 (lower is better) Translates to: MGIPPSEESPIFCRG*FGAETTTVLQIASA Trigger: TGCACTGGCAATTTGCAACACGGTGGTGGTTTCTGCACCGAACCAACCTCGGCAAAAGATTGGACTCTCCTCACTGGGTGGAATGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | CTTCCTGACATAGCAGCTGATTGGCTGGCATGCTTAGATGCCACGTaGTTGACCTTTGCTGTCCCTCTCCACCTCTTGAGAGCTTCAGCT | + |
Preference number: 5 (lower is better) Translates to: LPDIAADWLACLDAT*LTFAVPLHLLRASA Trigger: AGCTGAAGCTCTCAAGAGGTGGAGAGGGACAGCAAAGGTCAATCACGTGGCATCTAAGCATGCCAGCCAATCAGCTGCTATGTCAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS TCA 90 bp | GAGTCCTACGGCCCTGTTTTGTGCCTCTGTTTCTGTACAGCAAGCTaGGTTACTGGCCTGGGGGATTTCATCCATTTGGGAAGACTCGTC | + |
Preference number: 5 (lower is better) Translates to: ESYGPVLCLCFCTAS*VTGLGDFIHLGRLV Trigger: GACGAGTCTTCCCAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGAAACAGAGGCACAAAACAGGGCCGTAGGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCGTGCGCAGCCCTCGTTaGGCATACTCGTCCAGGTGC | + |
Preference number: 5 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSVRSPR*AYSSRC Trigger: GCACCTGGACGAGTATGCCAAACGAGGGCTGCGCAC...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | AAGGACTTGATGGGCATTCCACCCAGTGAGGAGAGTCCAATCTTTTaGCGAGGTTGGTTCGGTGCAGAAACCACCACCGTGTTGCAAATT | + |
Preference number: 5 (lower is better) Translates to: KDLMGIPPSEESPIF*RGWFGAETTTVLQI Trigger: AATTTGCAACACGGTGGTGGTTTCTGCACCGAACCAACCTCGGCAAAAGATTGGACTCTCCTCACTGGGTGGAATGCCCATCAAGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | TTGCCGAGGTTGGTTCGGTGCAGAAACCACCACCGTGTTGCAAATTaGCAGTGCAATAAAGAAGTCCATGATGTACAAAGTCTCCAGCGG | + |
Preference number: 5 (lower is better) Translates to: LPRLVRCRNHHRVAN*QCNKEVHDVQSLQR Trigger: CCGCTGGAGACTTTGTACATCATGGACTTCTTTATTGCACTGGCAATTTGCAACACGGTGGTGGTTTCTGCACCGAACCAACCTCGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | GCTACACATAGAGTGCGCAGCCCTCGTTTGGCATACTCGTCCAGGTaGCTCTGCGTTCTCTCCCTTATTATCATCTGTTGTTCTGGATTT | + |
Preference number: 5 (lower is better) Translates to: ATHRVRSPRLAYSSR*LCVLSLIIICCSGF Trigger: AAATCCAGAACAACAGATGATAATAAGGGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAAACGAGGGCTGCGCACTCTATGTGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 90 bp | TCTGTACAGCAAGCTGAGTTACTGGCCTGGGGGATTTCATCCATTTaGGAAGACTCGTCCTCCATAGGAGGTGACAGTTTTGGTCGACTA | + |
Preference number: 5 (lower is better) Translates to: SVQQAELLAWGISSI*EDSSSIGGDSFGRL Trigger: TAGTCGACCAAAACTGTCACCTCCTATGGAGGACGAGTCTTCCCAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 90 bp | CTGTTTTGTGCCTCTGTTTCTGTACAGCAAGCTGAGTTACTGGCCTaGGGGATTTCATCCATTTGGGAAGACTCGTCCTCCATAGGAGGT | + |
Preference number: 5 (lower is better) Translates to: LFCASVSVQQAELLA*GISSIWEDSSSIGG Trigger: ACCTCCTATGGAGGACGAGTCTTCCCAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGAAACAGAGGCACAAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCGAGGATCCAGTCATCTaGGAGGCCCCAGGTTCAGAG | + |
Preference number: 5 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSEDPVI*EAPGSE Trigger: CTCTGAACCTGGGGCCTCCAAGATGACTGGATCCTC...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | AAATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACGCAGGGATGATCTCATaGCAGGACAGGCGGATGAAG | + |
Preference number: 5 (lower is better) Translates to: KWRQHPSVICHSRNLATDAGMIS*QDRRMK Trigger: CTTCATCCGCCTGTCCTGCAATGAGATCATCCCTGC...GTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | CTTCAGCTCTCTCCTCTGGAGGTAGTCTGTCAAAGTACTTGGCTCTaGGAACTGGAGATGGAAACACGGATCCCTGAAGAACTCGGTAAA | + |
Preference number: 5 (lower is better) Translates to: LQLSPLEVVCQSTWL*ELEMETRIPEELGK Trigger: TTTACCGAGTTCTTCAGGGATCCGTGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACAGACTACCTCCAGAGGAGAGAGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS TCA 90 bp | GTAGGAGTTAAAATGTTAATGAGCCCAAAGCAGCAAAGTCCACCATaGCCTGCTCTGGGGTCCGAGACTGTAAAGTGCAACGGTAAGCTC | + |
Preference number: 5 (lower is better) Translates to: VGVKMLMSPKQQSPP*PALGSETVKCNGKL Trigger: GAGCTTACCGTTGCACTTTACAGTCTCGGACCCCAGAGCAGGTCATGGTGGACTTTGCTGCTTTGGGCTCATTAACATTTTAACTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | TTAAATTGCTCTCTCCATCAAGGCCGGAAGTCTCAATGTGGCAGATaGCATCTGGGTCTGTGGAAAAGAGTAAGACCATGTCTGCAGGGA | + |
Preference number: 5 (lower is better) Translates to: LNCSLHQGRKSQCGR*HLGLWKRVRPCLQG Trigger: TCCCTGCAGACATGGTCTTACTCTTTTCCACAGACCCAGATGGCATCTGCCACATTGAGACTTCCGGCCTTGATGGAGAGAGCAATTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | CAGCTCCGGAGACACTTGAGCTCTCTTCTGAAGTTCTTCCAAAATTaGACTCATCAGCATCCCACAGGCATCCTGACTCTGTGTATTGAG | + |
Preference number: 5 (lower is better) Translates to: QLRRHLSSLLKFFQN*THQHPTGILTLCIE Trigger: CTCAATACACAGAGTCAGGATGCCTGTGGGATGCTGATGAGTGCAATTTTGGAAGAACTTCAGAAGAGAGCTCAAGTGTCTCCGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 90 bp | ATTGGCATGTTCCAGGAAGCCTCGGAATCGGCTGAGGTCATTGTTTaGACTTTCACATTCTATCCTGCTGGAGAACTTCTCCGGATCAAC | + |
Preference number: 5 (lower is better) Translates to: IGMFQEASESAEVIV*TFTFYPAGELLRIN Trigger: GTTGATCCGGAGAAGTTCTCCAGCAGGATAGAATGTGAAAGTCCAAACAATGACCTCAGCCGATTCCGAGGCTTCCTGGAACATGCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCGAGGATCCAGTCATCTaGGAGGCCCCAGGTTCAGAG | + |
Preference number: 5 (lower is better) Translates to: VSISTHISFCGGHNTDKLEDPVI*EAPGSE Trigger: CTCTGAACCTGGGGCCTCCAAGATGACTGGATCCTC...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | CCTTCCCTACAAAGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCATCTCTTCCAAGGACTaGATGGGCATTCCACCCAGT | + |
Preference number: 5 (lower is better) Translates to: PSLQRLLQQKAEMTESDVISSKD*MGIPPS Trigger: ACTGGGTGGAATGCCCATCAAGTCCTTGGAAGAGAT...GACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCTTTGTAGGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCCTCAAGGAACTGCCTTaGCAGACTCTCCTGCAGGGC | + |
Preference number: 5 (lower is better) Translates to: VSISTHISFCGGHNTDKLLKELP*QTLLQG Trigger: GCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAG...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | CCACACGTTCTTTATTGGCATGTTCCAGGAAGCCTCGGAATCGGCTaGGGTCATTGTTTGGACTTTCACATTCTATCCTGCTGGAGAACT | + |
Preference number: 5 (lower is better) Translates to: PHVLYWHVPGSLGIG*GHCLDFHILSCWRT Trigger: AGTTCTCCAGCAGGATAGAATGTGAAAGTCCAAACAATGACCTCAGCCGATTCCGAGGCTTCCTGGAACATGCCAATAAAGAACGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | GATGTTTTTAATCTCTTCCAAGGACTTGATGGGCATTCCACCCAGTaGGGAGAGTCCAATCTTTTGCCGAGGTTGGTTCGGTGCAGAAAC | + |
Preference number: 5 (lower is better) Translates to: DVFNLFQGLDGHSTQ*GESNLLPRLVRCRN Trigger: GTTTCTGCACCGAACCAACCTCGGCAAAAGATTGGACTCTCCTCACTGGGTGGAATGCCCATCAAGTCCTTGGAAGAGATTAAAAACATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | CTGGGGGATTTCATCCATTTGGGAAGACTCGTCCTCCATAGGAGGTaGCAGTTTTGGTCGACTAAAGAAAGAGATTCTGCTCACAAAGGC | + |
Preference number: 5 (lower is better) Translates to: LGDFIHLGRLVLHRR*QFWSTKERDSAHKG Trigger: GCCTTTGTGAGCAGAATCTCTTTCTTTAGTCGACCAAAACTGTCACCTCCTATGGAGGACGAGTCTTCCCAAATGGATGAAATCCCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | ACTAGCAGTTCCTCCCTGTTGTCAATGCTGGTTTCAGCTAGAAAGTaGTTCCTCAGCCACTCTGCATATTCCGTGTCACTCATGACCTTC | + |
Preference number: 5 (lower is better) Translates to: TSSSSLLSMLVSARK*FLSHSAYSVSLMTF Trigger: GAAGGTCATGAGTGACACGGAATATGCAGAGTGGCTGAGGAATCACTTTCTAGCTGAAACCAGCATTGACAACAGGGAGGAACTGCTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 90 bp | CTCTGCTTTAAATTGCTCTCTCCATCAAGGCCGGAAGTCTCAATGTaGCAGATGCCATCTGGGTCTGTGGAAAAGAGTAAGACCATGTCT | + |
Preference number: 5 (lower is better) Translates to: LCFKLLSPSRPEVSM*QMPSGSVEKSKTMS Trigger: AGACATGGTCTTACTCTTTTCCACAGACCCAGATGGCATCTGCCACATTGAGACTTCCGGCCTTGATGGAGAGAGCAATTTAAAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 90 bp | GTCTCATGGCAGATTCAACTAGCAGTTCCTCCCTGTTGTCAATGCTaGTTTCAGCTAGAAAGTGATTCCTCAGCCACTCTGCATATTCCG | + |
Preference number: 5 (lower is better) Translates to: VSWQIQLAVPPCCQC*FQLESDSSATLHIP Trigger: CGGAATATGCAGAGTGGCTGAGGAATCACTTTCTAGCTGAAACCAGCATTGACAACAGGGAGGAACTGCTAGTTGAATCTGCCATGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATGATGTGAAGAGGAGGTaGAAGAAGATCAGCACCCAG | + |
Preference number: 5 (lower is better) Translates to: METASIRDLSQQKPCYRHDVKRR*KKISTQ Trigger: CTGGGTGCTGATCTTCTTCAACCTCCTCTTCACATC...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGTCCTACGGCCCTGTTTaGTGCCTCTGTTTCTGTACA | + |
Preference number: 5 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMSYGPV*CLCFCT Trigger: TGTACAGAAACAGAGGCACAAAACAGGGCCGTAGGA...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | AGGCTACTTCAGCAGAAAGCTGAAATGACAGAGAGTGACGTCAAACACCTTCAGTCTGTTGTTCTGGATTaGTTCCATCTGAGGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: RLLQQKAEMTESDVKHLQSVVLD*FHLRQP Trigger: TGGCTGCCTCAGATGGAACAAATCCAGAACAACAGA...CTGAAGGTGTTTGACGTCACTCTCTGTCATTTCAGCTTTCTGCTGAAGTAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | CTAGTCTCATGGCAGATTCAACTAGCAGTTCCTCCCTGTTGTCAATaGTGGTTTCAGCTAGAAAGTGATTCCTCAGCCACTCTGCATATT | + |
Preference number: 5 (lower is better) Translates to: LVSWQIQLAVPPCCQ*WFQLESDSSATLHI Trigger: AATATGCAGAGTGGCTGAGGAATCACTTTCTAGCTGAAACCAGCATTGACAACAGGGAGGAACTGCTAGTTGAATCTGCCATGAGACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | ATGGAGACAGCATCCATCCGTGATTTGTCACAGCAGAAACCTTGCTACAGACATGAAGCAGACCAGGCTTaGATAAAAGGCATCCAACAA | + |
Preference number: 5 (lower is better) Translates to: METASIRDLSQQKPCYRHEADQA*IKGIQQ Trigger: TTGTTGGATGCCTTTTATCAAAGCCTGGTCTGCTTC...ATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACGGATGGATGCTGTCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTGCCTCTGCTTTAAATaGCTCTCTCCATCAAGGCCG | + |
Preference number: 5 (lower is better) Translates to: DISTLQYVDFSKSLGDSHCLCFK*LSPSRP Trigger: CGGCCTTGATGGAGAGAGCAATTTAAAGCAGAGGCA...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCAGAGGACGTCGGTGTTaGCTCTTCTCTCTAACTTAC | + |
Preference number: 5 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSRGRRC*LFSLTY Trigger: GTAAGTTAGAGAGAAGAGCAAACACCGACGTCCTCT...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACAATCTTTTGCCGAGGTaGGTTCGGTGCAGAAACCAC | + |
Preference number: 5 (lower is better) Translates to: DISTLQYVDFSKSLGDSHNLLPR*VRCRNH Trigger: GTGGTTTCTGCACCGAACCAACCTCGGCAAAAGATT...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACTTGAGGATGAAGAGCTaGTCATCTGGCTCCAGGAGT | + |
Preference number: 5 (lower is better) Translates to: DISTLQYVDFSKSLGDSHLRMKS*SSGSRS Trigger: ACTCCTGGAGCCAGATGACAAGCTCTTCATCCTCAA...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCACATGGTGATTTCCTTTaGGAAGGCTTCTACCAAAGG | + |
Preference number: 5 (lower is better) Translates to: WRAQHRQTLEHCYNYELSHGDFL*EGFYQR Trigger: CCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATG...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | TGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGAACTCTCATGTATACACCACGACTaGTTTGGAAAGAGGATGCCT | + |
Preference number: 5 (lower is better) Translates to: WRAQHRQTLEHCYNYELSCIHHD*FGKRMP Trigger: AGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACA...TGAGAGTTCATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | TCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGCACTGTTACAACTATGCAGAATCAGCGCCTTTaGTATACACCACGACTTGTT | + |
Preference number: 5 (lower is better) Translates to: SFCGGHNTDKLLSTVTTMQNQRL*YTPRLV Trigger: AACAAGTCGTGGTGTATACAAAAGGCGCTGATTCTG...CATAGTTGTAACAGTGCTCAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | CGTGATTTGTCACAGCAGAAACCTTGCTACAGACATCTCTACCCTTCAATATGTTGCACAAGGAGAAGTTaGCTGAGATGTCTGAACTGG | + |
Preference number: 5 (lower is better) Translates to: RDLSQQKPCYRHLYPSICCTRRS*LRCLNW Trigger: CCAGTTCAGACATCTCAGCAAACTTCTCCTTGTGCA...ACATATTGAAGGGTAGAGATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 90 bp | CTTGTCGATTTTGTATTTCCGGTAGTCTTCCAAGCCATCTTTAATTaGAATAATTGTGAGGACCACCACCAGAGGCAGCATGGTGATTTC | + |
Preference number: 5 (lower is better) Translates to: LVDFVFPVVFQAIFN*NNCEDHHQRQHGDF Trigger: GAAATCACCATGCTGCCTCTGGTGGTGGTCCTCACAATTATTGCAATTAAAGATGGCTTGGAAGACTACCGGAAATACAAAATCGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |
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CDS-3UTR CAA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGGAAGCAGACCAGGCTTaGATAAAAGGCATCCAACAA | + |
Preference number: 5 (lower is better) Translates to: SISTHISFCGGHNTDKLLEADQA*IKGIQQ Trigger: TTGTTGGATGCCTTTTATCAAAGCCTGGTCTGCTTC...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGAGTCTGTCAAAGTACTaGGCTCTGAGAACTGGAGAT | + |
Preference number: 5 (lower is better) Translates to: SISTHISFCGGHNTDKLLSLSKY*ALRTGD Trigger: ATCTCCAGTTCTCAGAGCCAAGTACTTTGACAGACT...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | CCAAAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAAAGCAGTTCCTCCCTGTaGTCAATGCTGGTTTCAGCT | + |
Preference number: 5 (lower is better) Translates to: PKPSLMGNKRLLGICPQKSSSSL*SMLVSA Trigger: AGCTGAAACCAGCATTGACAACAGGGAGGAACTGCT...TTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTTTGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACGAAGTTCTTCCAAAATaGCACTCATCAGCATCCCAC | + |
Preference number: 5 (lower is better) Translates to: DISTLQYVDFSKSLGDSHEVLPK*HSSASH Trigger: GTGGGATGCTGATGAGTGCAATTTTGGAAGAACTTC...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | TCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCTTGCCCAATGTCGGCCACTaGTATCATGCTAACATCATT | + |
Preference number: 5 (lower is better) Translates to: SISTHISFCGGHNTDKLLPNVGH*YHANII Trigger: AATGATGTTAGCATGATACAAGTGGCCGACATTGGG...CAAGAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 90 bp | GAGGTTGAAGAAGATCAGCACCCAGTAGTCTGTCATAGATGTTCCTaGAAACCCACAAAAGAACTGGTACCAGAAAAGGAGATTCACATA | + |
Preference number: 5 (lower is better) Translates to: EVEEDQHPVVCHRCS*KPTKELVPEKEIHI Trigger: TATGTGAATCTCCTTTTCTGGTACCAGTTCTTTTGTGGGTTTTCAGGAACATCTATGACAGACTACTGGGTGCTGATCTTCTTCAACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GAGGTTCTTGGTTTTTCCATGCCAAGCAAAATGCTGACATCCCTTGTACAAAGCAAGTTGTTGATCTGCTaGTCGATTTTGTATTTCCGG | + |
Preference number: 5 (lower is better) Translates to: EVLGFSMPSKMLTSLVQSKLLIC*SILYFR Trigger: CCGGAAATACAAAATCGACAAGCAGATCAACAACTT...GCTTTGTACAAGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GACATCTCTACCCTTCAATATGTTGATTTTTCTAAGAGCCTCGGAGATTCCCACCCAAGTAACGTGAGTTaGTTTTCTAGTCTCATGGCA | + |
Preference number: 5 (lower is better) Translates to: DISTLQYVDFSKSLGDSHPSNVS*FSSLMA Trigger: TGCCATGAGACTAGAAAACAAACTCACGTTACTTGG...GTGGGAATCTCCGAGGCTCTTAGAAAAATCAACATATTGAAGGGTAGAGATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | CTTTGTTTACAAATGTGCTCACAGGTATACAATGATAGAGAGGTTCTTGGTTTTGATGTGAAGAGGAGGTaGAAGAAGATCAGCACCCAG | + |
Preference number: 5 (lower is better) Translates to: LCLQMCSQVYNDREVLGFDVKRR*KKISTQ Trigger: CTGGGTGCTGATCTTCTTCAACCTCCTCTTCACATC...AAAACCAAGAACCTCTCTATCATTGTATACCTGTGAGCACATTTGTAAACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | GTATCAATTTCAACCCATATCTCATTCTGTGGAGGGCACAACACAGACAAACTCGTTCAAATAAGTTTCTaGGCACAAAGTTCAGGAGTG | + |
Preference number: 5 (lower is better) Translates to: VSISTHISFCGGHNTDKLVQISF*AQSSGV Trigger: CACTCCTGAACTTTGTGCCAAGAAACTTATTTGAAC...GAGTTTGTCTGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
||
CDS-3UTR CAA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTATACCGTGGCCCACTGTaGTTCAGCATTGCTTTGGTT | + |
Preference number: 5 (lower is better) Translates to: KPSLMGNKRLLGICPQKLYRGPL*FSIALV Trigger: AACCAAAGCAATGCTGAACAACAGTGGGCCACGGTA...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS-3UTR CAA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTAGAAACCACCACCGTGTaGCAAATTGCCAGTGCAATA | + |
Preference number: 5 (lower is better) Translates to: KPSLMGNKRLLGICPQKLETTTV*QIASAI Trigger: TATTGCACTGGCAATTTGCAACACGGTGGTGGTTTC...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
||
CDS-3UTR CAA 90 bp | AAACCTTCTCTCATGGGAAATAAAAGGCTCTTGGGAATTTGTCCTCAAAAATTAAATCGGCTGAGGTCATaGTTTGGACTTTCACATTCT | + |
Preference number: 5 (lower is better) Translates to: KPSLMGNKRLLGICPQKLNRLRS*FGLSHS Trigger: AGAATGTGAAAGTCCAAACAATGACCTCAGCCGATT...TAATTTTTGAGGACAAATTCCCAAGAGCCTTTTATTTCCCATGAGAGAAGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | GGGCTCTCCCATGGCTCAGCCGACGCCAGTGATGTCTaGCCCACTGCAGCAGCTCAGTCATGCCCAAGACGC | + |
Preference number: 6 (lower is better) Translates to: GLSHGSADASDV*PTAAAQSCPRR Trigger: GCGTCTTGGGCATGACTGAGCTGCTGCAGTGGGCCAGACATCACTGGCGTCGGCTGAGCCATGGGAGAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |
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CDS TCA 72 bp | TCCTGCAGCCCTGGGCTCTGGGTCTCGCCATGTTGCTaGGGGAGCCGCCGAGAGTGTCTGTGCATTCCTCCT | + |
Preference number: 6 (lower is better) Translates to: SCSPGLWVSPCC*GSRRECLCIPP Trigger: AGGAGGAATGCACAGACACTCTCGGCGGCTCCCTCAGCAACATGGCGAGACCCAGAGCCCAGGGCTGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | TCTCCATTTCCTACAGCAGAGGTGCTCCCGGAGAGCTaGGCCGAGGGCTTTCCCAGAGGCCCACTGGGAACT | + |
Preference number: 6 (lower is better) Translates to: SPFPTAEVLPES*AEGFPRGPLGT Trigger: AGTTCCCAGTGGGCCTCTGGGAAAGCCCTCGGCTCAGCTCTCCGGGAGCACCTCTGCTGTAGGAAATGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | CTTCCCCAGATCCTTCTCCATTTCCTACAGCAGAGGTaGTCCCGGAGAGCTGAGCCGAGGGCTTTCCCAGAG | + |
Preference number: 6 (lower is better) Translates to: LPQILLHFLQQR*SRRAEPRAFPE Trigger: CTCTGGGAAAGCCCTCGGCTCAGCTCTCCGGGAGCACCTCTGCTGTAGGAAATGGAGAAGGATCTGGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | GCTTGGCACCACGCGGTCAGCTCAAGGAACTGCCTTTaGAGACTCTCCTGCAGGGCAAACTCCAGGGTCTTC | + |
Preference number: 6 (lower is better) Translates to: AWHHAVSSRNCL*RLSCRANSRVF Trigger: GAAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | CTGCTTCATCTGGACTCTCCGCCTCATAGCACAGGTTaGAAGCCGAGGGCGGTGGTCCACTTAGGGCTTCAG | + |
Preference number: 6 (lower is better) Translates to: LLHLDSPPHSTG*KPRAVVHLGLQ Trigger: CTGAAGCCCTAAGTGGACCACCGCCCTCGGCTTCCAACCTGTGCTATGAGGCGGAGAGTCCAGATGAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 90 bp | GCAGATCACAGCTTGGCACCACGCGGTCAGCTCAAGGAACTGCCTTaGCAGACTCTCCTGCAGGGCAAACTCCAGGGTCTTCCCAGTGAT | + |
Preference number: 6 (lower is better) Translates to: ADHSLAPRGQLKELP*QTLLQGKLQGLPSD Trigger: ATCACTGGGAAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCAAGCTGTGATCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | ATCACAGCTTGGCACCACGCGGTCAGCTCAAGGAACTaGCTTTGCAGACTCTCCTGCAGGGCAAACTCCAGG | + |
Preference number: 6 (lower is better) Translates to: ITAWHHAVSSRN*LCRLSCRANSR Trigger: CCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCAAGCTGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | AGGCACAGGGAGTCCCAGAGGATGAATCCTTCCCACTaGCAAGGGACGGTGAACTTGATCTCCGGACGGACA | + |
Preference number: 6 (lower is better) Translates to: RHRESQRMNPSH*QGTVNLISGRT Trigger: TGTCCGTCCGGAGATCAAGTTCACCGTCCCTTGCCAGTGGGAAGGATTCATCCTCTGGGACTCCCTGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | AGCTTGGCACCACGCGGTCAGCTCAAGGAACTGCCTTaGCAGACTCTCCTGCAGGGCAAACTCCAGGGTCTT | + |
Preference number: 6 (lower is better) Translates to: SLAPRGQLKELP*QTLLQGKLQGL Trigger: AAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGCGTGGTGCCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | TCCCCTGTCAGCATCCAGATCTTGATGCCAGCTTGGTaGAGGGCTTCTATAGACTCAGGGACCCCCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: SPVSIQILMPAW*RASIDSGTPSC Trigger: GCAGGAGGGGGTCCCTGAGTCTATAGAAGCCCTTCACCAAGCTGGCATCAAGATCTGGATGCTGACAGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | CCTTCTTTGCTACACATAGAGTGCGCAGCCCTCGTTTaGCATACTCGTCCAGGTGCCTCTGCGTTCTCTCCC | + |
Preference number: 6 (lower is better) Translates to: PSLLHIECAALV*HTRPGASAFSP Trigger: GGGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAAACGAGGGCTGCGCACTCTATGTGTAGCAAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | GCTCATCCCAGCATGGTGTTACCTCGGATCCCAAAGTaGCAAAAGAGAACGGAGCAGAGATCCAAAGGGCGG | + |
Preference number: 6 (lower is better) Translates to: AHPSMVLPRIPK*QKRTEQRSKGR Trigger: CCGCCCTTTGGATCTCTGCTCCGTTCTCTTTTGGCACTTTGGGATCCGAGGTAACACCATGCTGGGATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |
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CDS GCA 72 bp | ATGGGCATTCCACCCAGTGAGGAGAGTCCAATCTTTTaGCGAGGTTGGTTCGGTGCAGAAACCACCACCGTG | + |
Preference number: 6 (lower is better) Translates to: MGIPPSEESPIF*RGWFGAETTTV Trigger: CACGGTGGTGGTTTCTGCACCGAACCAACCTCGGCAAAAGATTGGACTCTCCTCACTGGGTGGAATGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | GCGGTCAGCTCAAGGAACTGCCTTTGCAGACTCTCCTaGAGGGCAAACTCCAGGGTCTTCCCAGTGATAACA | + |
Preference number: 6 (lower is better) Translates to: AVSSRNCLCRLS*RANSRVFPVIT Trigger: TGTTATCACTGGGAAGACCCTGGAGTTTGCCCTGCAGGAGAGTCTGCAAAGGCAGTTCCTTGAGCTGACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | ACCTTCTTTGCTACACATAGAGTGCGCAGCCCTCGTTaGGCATACTCGTCCAGGTGCCTCTGCGTTCTCTCC | + |
Preference number: 6 (lower is better) Translates to: TFFATHRVRSPR*AYSSRCLCVLS Trigger: GGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAAACGAGGGCTGCGCACTCTATGTGTAGCAAAGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | GGCCCTGAGCGTCAGAGGGCTGAGGAAAGTTCTTTCTaGATGATGCCAGCTCCGGAGACACTTGAGCTCTCT | + |
Preference number: 6 (lower is better) Translates to: GPERQRAEESSF*MMPAPETLELS Trigger: AGAGAGCTCAAGTGTCTCCGGAGCTGGCATCATCAAGAAAGAACTTTCCTCAGCCCTCTGACGCTCAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | CTGGGGTCCGAGACTGTAAAGTGCAACGGTAAGCTCTaGCGGCATACACCAAAGCTGCTTCATCTGGACTCT | + |
Preference number: 6 (lower is better) Translates to: LGSETVKCNGKL*RHTPKLLHLDS Trigger: AGAGTCCAGATGAAGCAGCTTTGGTGTATGCCGCCAGAGCTTACCGTTGCACTTTACAGTCTCGGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | AGAGTGCGCAGCCCTCGTTTGGCATACTCGTCCAGGTaGCTCTGCGTTCTCTCCCTTATTATCATCTGTTGT | + |
Preference number: 6 (lower is better) Translates to: RVRSPRLAYSSR*LCVLSLIIICC Trigger: ACAACAGATGATAATAAGGGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAAACGAGGGCTGCGCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | CCACCCAGTGAGGAGAGTCCAATCTTTTGCCGAGGTTaGTTCGGTGCAGAAACCACCACCGTGTTGCAAATT | + |
Preference number: 6 (lower is better) Translates to: PPSEESPIFCRG*FGAETTTVLQI Trigger: AATTTGCAACACGGTGGTGGTTTCTGCACCGAACCAACCTCGGCAAAAGATTGGACTCTCCTCACTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | GAAAAGAGTAAGACCATGTCTGCAGGGATGATCTCATaGCAGGACAGGCGGATGAAGTCCCCGACGGTGACA | + |
Preference number: 6 (lower is better) Translates to: EKSKTMSAGMIS*QDRRMKSPTVT Trigger: TGTCACCGTCGGGGACTTCATCCGCCTGTCCTGCAATGAGATCATCCCTGCAGACATGGTCTTACTCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 90 bp | AAGATGCTCCCAACCGTGACCAGCATGTGGATCCAAGTCAAACTCTaGCTTTCAATCACCAGGTGGAGGAGAATGATGAACAGAGCCGCC | + |
Preference number: 6 (lower is better) Translates to: KMLPTVTSMWIQVKL*LSITRWRRMMNRAA Trigger: GGCGGCTCTGTTCATCATTCTCCTCCACCTGGTGATTGAAAGCAAGAGTTTGACTTGGATCCACATGCTGGTCACGGTTGGGAGCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS CAA 90 bp | TCACTCATGACCTTCTTTGCTACACATAGAGTGCGCAGCCCTCGTTaGGCATACTCGTCCAGGTGCCTCTGCGTTCTCTCCCTTATTATC | + |
Preference number: 6 (lower is better) Translates to: SLMTFFATHRVRSPR*AYSSRCLCVLSLII Trigger: GATAATAAGGGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAAACGAGGGCTGCGCACTCTATGTGTAGCAAAGAAGGTCATGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | ATAGCAGCTGATTGGCTGGCATGCTTAGATGCCACGTaGTTGACCTTTGCTGTCCCTCTCCACCTCTTGAGA | + |
Preference number: 6 (lower is better) Translates to: IAADWLACLDAT*LTFAVPLHLLR Trigger: TCTCAAGAGGTGGAGAGGGACAGCAAAGGTCAATCACGTGGCATCTAAGCATGCCAGCCAATCAGCTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS TCA 72 bp | CTCACGTGTGCTCTGCTCAACAGTAGACACTGTTGCTaGCTTCATTGCAAGGACAGCAGAAGACCCAGGTGT | + |
Preference number: 6 (lower is better) Translates to: LTCALLNSRHCC*LHCKDSRRPRC Trigger: ACACCTGGGTCTTCTGCTGTCCTTGCAATGAAGTCAGCAACAGTGTCTACTGTTGAGCAGAGCACACGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS TCA 72 bp | CATAGACCACAATGCCCACCACAGCCTCTGTGTTTCTaGTGGTGCACCCGCGGAGCAATAAATTCTCTTTGC | + |
Preference number: 6 (lower is better) Translates to: HRPQCPPQPLCF*WCTRGAINSLC Trigger: GCAAAGAGAATTTATTGCTCCGCGGGTGCACCATCAGAAACACAGAGGCTGTGGTGGGCATTGTGGTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | AATCTCTTCCAAGGACTTGATGGGCATTCCACCCAGTaGGGAGAGTCCAATCTTTTGCCGAGGTTGGTTCGG | + |
Preference number: 6 (lower is better) Translates to: NLFQGLDGHSTQ*GESNLLPRLVR Trigger: CCGAACCAACCTCGGCAAAAGATTGGACTCTCCTCACTGGGTGGAATGCCCATCAAGTCCTTGGAAGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | GGCCCTGTTTTGTGCCTCTGTTTCTGTACAGCAAGCTaGGTTACTGGCCTGGGGGATTTCATCCATTTGGGA | + |
Preference number: 6 (lower is better) Translates to: GPVLCLCFCTAS*VTGLGDFIHLG Trigger: TCCCAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGAAACAGAGGCACAAAACAGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | GATTCCTCAGCCACTCTGCATATTCCGTGTCACTCATaGCCTTCTTTGCTACACATAGAGTGCGCAGCCCTC | + |
Preference number: 6 (lower is better) Translates to: DSSATLHIPCHS*PSLLHIECAAL Trigger: GAGGGCTGCGCACTCTATGTGTAGCAAAGAAGGTCATGAGTGACACGGAATATGCAGAGTGGCTGAGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | TCAGCTCTCTCCTCTGGAGGTAGTCTGTCAAAGTACTaGGCTCTGAGAACTGGAGATGGAAACACGGATCCC | + |
Preference number: 6 (lower is better) Translates to: SALSSGGSLSKY*ALRTGDGNTDP Trigger: GGGATCCGTGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACAGACTACCTCCAGAGGAGAGAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS CAA 90 bp | CCGCGGAGCAATAAATTCTCTTTGCTGAGGCCCACACGTTCTTTATaGGCATGTTCCAGGAAGCCTCGGAATCGGCTGAGGTCATTGTTT | + |
Preference number: 6 (lower is better) Translates to: PRSNKFSLLRPTRSL*ACSRKPRNRLRSLF Trigger: AAACAATGACCTCAGCCGATTCCGAGGCTTCCTGGAACATGCCAATAAAGAACGTGTGGGCCTCAGCAAAGAGAATTTATTGCTCCGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | AATAAAGAAGTCCATGATGTACAAAGTCTCCAGCGGTaGACTCTGAGCGGTGCCATCCAGTCCAGTGAGCAG | + |
Preference number: 6 (lower is better) Translates to: NKEVHDVQSLQR*TLSGAIQSSEQ Trigger: CTGCTCACTGGACTGGATGGCACCGCTCAGAGTTCACCGCTGGAGACTTTGTACATCATGGACTTCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | GCTCCGGTAAAGTTCAGGCAGCTGCAGGAGGGTCTCTaGCGAAACATCTTTCTCCAAAACGCCATAAATGAT | + |
Preference number: 6 (lower is better) Translates to: APVKFRQLQEGL*RNIFLQNAIND Trigger: ATCATTTATGGCGTTTTGGAGAAAGATGTTTCGGCAGAGACCCTCCTGCAGCTGCCTGAACTTTACCGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS CAA 72 bp | GCATGTTCCAGGAAGCCTCGGAATCGGCTGAGGTCATaGTTTGGACTTTCACATTCTATCCTGCTGGAGAAC | + |
Preference number: 6 (lower is better) Translates to: ACSRKPRNRLRS*FGLSHSILLEN Trigger: GTTCTCCAGCAGGATAGAATGTGAAAGTCCAAACAATGACCTCAGCCGATTCCGAGGCTTCCTGGAACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | TCTCCTCTGGAGGTAGTCTGTCAAAGTACTTGGCTCTaGGAACTGGAGATGGAAACACGGATCCCTGAAGAA | + |
Preference number: 6 (lower is better) Translates to: SPLEVVCQSTWL*ELEMETRIPEE Trigger: TTCTTCAGGGATCCGTGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACAGACTACCTCCAGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS TCA 72 bp | GTTCCAGAAAACCTTTCGTACTCATCTTTGAAGCACTaGAGGTGGGGAATAACGACGCGGTGCTTTCCTGCA | + |
Preference number: 6 (lower is better) Translates to: VPENLSYSSLKH*RWGITTRCFPA Trigger: TGCAGGAAAGCACCGCGTCGTTATTCCCCACCTTCAGTGCTTCAAAGATGAGTACGAAAGGTTTTCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |
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CDS TCA 72 bp | AAGAGCATGTTCTCATACCTGCTCAGCCATATGCCGTaGCCCAGTGCACCAGTTAAGCACATGACAATCAGA | + |
Preference number: 6 (lower is better) Translates to: KSMFSYLLSHMP*PSAPVKHMTIR Trigger: TCTGATTGTCATGTGCTTAACTGGTGCACTGGGTCACGGCATATGGCTGAGCAGGTATGAGAACATGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | AAAATGTTAATGAGCCCAAAGCAGCAAAGTCCACCATaGCCTGCTCTGGGGTCCGAGACTGTAAAGTGCAAC | + |
Preference number: 6 (lower is better) Translates to: KMLMSPKQQSPP*PALGSETVKCN Trigger: GTTGCACTTTACAGTCTCGGACCCCAGAGCAGGTCATGGTGGACTTTGCTGCTTTGGGCTCATTAACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | TCCTCCCTGTTGTCAATGCTGGTTTCAGCTAGAAAGTaGTTCCTCAGCCACTCTGCATATTCCGTGTCACTC | + |
Preference number: 6 (lower is better) Translates to: SSLLSMLVSARK*FLSHSAYSVSL Trigger: GAGTGACACGGAATATGCAGAGTGGCTGAGGAATCACTTTCTAGCTGAAACCAGCATTGACAACAGGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | AAATTGCTCTCTCCATCAAGGCCGGAAGTCTCAATGTaGCAGATGCCATCTGGGTCTGTGGAAAAGAGTAAG | + |
Preference number: 6 (lower is better) Translates to: KLLSPSRPEVSM*QMPSGSVEKSK Trigger: CTTACTCTTTTCCACAGACCCAGATGGCATCTGCCACATTGAGACTTCCGGCCTTGATGGAGAGAGCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | TTTGTGCCTCTGTTTCTGTACAGCAAGCTGAGTTACTaGCCTGGGGGATTTCATCCATTTGGGAAGACTCGT | + |
Preference number: 6 (lower is better) Translates to: FVPLFLYSKLSY*PGGFHPFGKTR Trigger: ACGAGTCTTCCCAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGAAACAGAGGCACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | AATAAATTCTCTTTGCTGAGGCCCACACGTTCTTTATaGGCATGTTCCAGGAAGCCTCGGAATCGGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: NKFSLLRPTRSL*ACSRKPRNRLR Trigger: CCTCAGCCGATTCCGAGGCTTCCTGGAACATGCCAATAAAGAACGTGTGGGCCTCAGCAAAGAGAATTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | TTTCTGATGGTGCACCCGCGGAGCAATAAATTCTCTTaGCTGAGGCCCACACGTTCTTTATTGGCATGTTCC | + |
Preference number: 6 (lower is better) Translates to: FLMVHPRSNKFS*LRPTRSLLACS Trigger: GGAACATGCCAATAAAGAACGTGTGGGCCTCAGCAAAGAGAATTTATTGCTCCGCGGGTGCACCATCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 90 bp | TCTTTATTGGCATGTTCCAGGAAGCCTCGGAATCGGCTGAGGTCATaGTTTGGACTTTCACATTCTATCCTGCTGGAGAACTTCTCCGGA | + |
Preference number: 6 (lower is better) Translates to: SLLACSRKPRNRLRS*FGLSHSILLENFSG Trigger: TCCGGAGAAGTTCTCCAGCAGGATAGAATGTGAAAGTCCAAACAATGACCTCAGCCGATTCCGAGGCTTCCTGGAACATGCCAATAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 90 bp | CAGCTCCATGATAACAGAATCAGCGCCTTTTGTATACACCACGACTaGTTTGGAAAGAGGATGCCTGACCACGACCGACATTCTTTTCCT | + |
Preference number: 6 (lower is better) Translates to: QLHDNRISAFCIHHD*FGKRMPDHDRHSFP Trigger: AGGAAAAGAATGTCGGTCGTGGTCAGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGGCGCTGATTCTGTTATCATGGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | CTTTATTGGCATGTTCCAGGAAGCCTCGGAATCGGCTaGGGTCATTGTTTGGACTTTCACATTCTATCCTGC | + |
Preference number: 6 (lower is better) Translates to: LYWHVPGSLGIG*GHCLDFHILSC Trigger: GCAGGATAGAATGTGAAAGTCCAAACAATGACCTCAGCCGATTCCGAGGCTTCCTGGAACATGCCAATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | CATAGAGAGAAATGGGGATCAGGACCTGCAGCAAGATaGTCATGGTCCAGAACACATAGAATCCAGTCAGCA | + |
Preference number: 6 (lower is better) Translates to: HREKWGSGPAAR*SWSRTHRIQSA Trigger: TGCTGACTGGATTCTATGTGTTCTGGACCATGATCATCTTGCTGCAGGTCCTGATCCCCATTTCTCTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | CGGTGCAGAAACCACCACCGTGTTGCAAATTGCCAGTaGAATAAAGAAGTCCATGATGTACAAAGTCTCCAG | + |
Preference number: 6 (lower is better) Translates to: RCRNHHRVANCQ*NKEVHDVQSLQ Trigger: CTGGAGACTTTGTACATCATGGACTTCTTTATTGCACTGGCAATTTGCAACACGGTGGTGGTTTCTGCACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | AGACACTTGAGCTCTCTTCTGAAGTTCTTCCAAAATTaGACTCATCAGCATCCCACAGGCATCCTGACTCTG | + |
Preference number: 6 (lower is better) Translates to: RHLSSLLKFFQN*THQHPTGILTL Trigger: CAGAGTCAGGATGCCTGTGGGATGCTGATGAGTGCAATTTTGGAAGAACTTCAGAAGAGAGCTCAAGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | ACAGAATCAGCGCCTTTTGTATACACCACGACTTGTTaGGAAAGAGGATGCCTGACCACGACCGACATTCTT | + |
Preference number: 6 (lower is better) Translates to: TESAPFVYTTTC*ERGCLTTTDIL Trigger: AAGAATGTCGGTCGTGGTCAGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGGCGCTGATTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | GATAACAGAATCAGCGCCTTTTGTATACACCACGACTaGTTTGGAAAGAGGATGCCTGACCACGACCGACAT | + |
Preference number: 6 (lower is better) Translates to: DNRISAFCIHHD*FGKRMPDHDRH Trigger: ATGTCGGTCGTGGTCAGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGGCGCTGATTCTGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | GAGACACTTGAGCTCTCTTCTGAAGTTCTTCCAAAATaGCACTCATCAGCATCCCACAGGCATCCTGACTCT | + |
Preference number: 6 (lower is better) Translates to: ETLELSSEVLPK*HSSASHRHPDS Trigger: AGAGTCAGGATGCCTGTGGGATGCTGATGAGTGCAATTTTGGAAGAACTTCAGAAGAGAGCTCAAGTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | CCTTTTGTATACACCACGACTTGTTTGGAAAGAGGATaGCTGACCACGACCGACATTCTTTTCCTTACAGAG | + |
Preference number: 6 (lower is better) Translates to: PFVYTTTCLERG*LTTTDILFLTE Trigger: CTCTGTAAGGAAAAGAATGTCGGTCGTGGTCAGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CCA 72 bp | ATAAGTTTCTTGGCACAAAGTTCAGGAGTGTGTACTTaGTCGTCCGTATCCGGTTATTCACGTAGGTTCCAG | + |
Preference number: 6 (lower is better) Translates to: ISFLAQSSGVCT*SSVSGYSRRFQ Trigger: CTGGAACCTACGTGAATAACCGGATACGGACGACCAAGTACACACTCCTGAACTTTGTGCCAAGAAACTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |
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CDS CAA 72 bp | GTAGGTAAAGTAAGGCACGAAGAAGCAGACCAGGCTTaGATAAAAGGCATCCAACAAGGTGATCCAGAAGGT | + |
Preference number: 6 (lower is better) Translates to: VGKVRHEEADQA*IKGIQQGDPEG Trigger: ACCTTCTGGATCACCTTGTTGGATGCCTTTTATCAAAGCCTGGTCTGCTTCTTCGTGCCTTACTTTACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094710.8 ENSMUST00000126664.8 |
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CDS CAA 90 bp | TCCATGATAACAGAATCAGCGCCTTTTGTATACACCACGACTTGTTaGGAAAGAGGATGCCTGACCACGACCGACATTCTTTTCCTTACA | + |
Preference number: 6 (lower is better) Translates to: SMITESAPFVYTTTC*ERGCLTTTDILFLT Trigger: TGTAAGGAAAAGAATGTCGGTCGTGGTCAGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGGCGCTGATTCTGTTATCATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | TTGTATACACCACGACTTGTTTGGAAAGAGGATGCCTaGCCACGACCGACATTCTTTTCCTTACAGAGTCAA | + |
Preference number: 6 (lower is better) Translates to: LYTPRLVWKEDA*PRPTFFSLQSQ Trigger: TTGACTCTGTAAGGAAAAGAATGTCGGTCGTGGTCAGGCATCCTCTTTCCAAACAAGTCGTGGTGTATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | CCTTATTATCATCTGTTGTTCTGGATTTGTTCCATCTaGGGCAGCCACAGACAGCAGCTCCATGATAACAGA | + |
Preference number: 6 (lower is better) Translates to: PYYHLLFWICSI*GSHRQQLHDNR Trigger: TCTGTTATCATGGAGCTGCTGTCTGTGGCTGCCTCAGATGGAACAAATCCAGAACAACAGATGATAATAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | GAAGATCAGCACCCAGTAGTCTGTCATAGATGTTCCTaGAAACCCACAAAAGAACTGGTACCAGAAAAGGAG | + |
Preference number: 6 (lower is better) Translates to: EDQHPVVCHRCS*KPTKELVPEKE Trigger: CTCCTTTTCTGGTACCAGTTCTTTTGTGGGTTTTCAGGAACATCTATGACAGACTACTGGGTGCTGATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | TTGGTTCGGTGCAGAAACCACCACCGTGTTGCAAATTaGCAGTGCAATAAAGAAGTCCATGATGTACAAAGT | + |
Preference number: 6 (lower is better) Translates to: LVRCRNHHRVAN*QCNKEVHDVQS Trigger: ACTTTGTACATCATGGACTTCTTTATTGCACTGGCAATTTGCAACACGGTGGTGGTTTCTGCACCGAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS CAA 72 bp | CGATCCTCAATGCCAGTAGCACCAAGTAACGTGAGTTaGTTTTCTAGTCTCATGGCAGATTCAACTAGCAGT | + |
Preference number: 6 (lower is better) Translates to: RSSMPVAPSNVS*FSSLMADSTSS Trigger: ACTGCTAGTTGAATCTGCCATGAGACTAGAAAACAAACTCACGTTACTTGGTGCTACTGGCATTGAGGATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS TCA 72 bp | CCATTTTCTCGTTGTAGAAATCTACATCGCTCTGGATaGAATAGATCTGCCCAAGCTTCACGATCTCAATGG | + |
Preference number: 6 (lower is better) Translates to: PFSRCRNLHRSG*NRSAQASRSQW Trigger: CCATTGAGATCGTGAAGCTTGGGCAGATCTATTTCATCCAGAGCGATGTAGATTTCTACAACGAGAAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126664.8 |
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CDS GCA 72 bp | TTTGTATTTCCGGTAGTCTTCCAAGCCATCTTTAATTaGAATAATTGTGAGGACCACCACCAGAGGCAGCAT | + |
Preference number: 6 (lower is better) Translates to: FVFPVVFQAIFN*NNCEDHHQRQH Trigger: ATGCTGCCTCTGGTGGTGGTCCTCACAATTATTGCAATTAAAGATGGCTTGGAAGACTACCGGAAATACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126664.8 ENSMUST00000169617.3 |