RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATOX1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018585

Ensembl transcript IDs: ENSMUST00000108857.2

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAGCGGGGAAGGCCTGTCTGGGCAGGAACTCCATGGCTGGGCTaGACTGGACTGAGCAGTTGGTGTTCCAGATCTGCCGGGGAGACC +
Preference number: 1 (lower is better)
Translates to: SQRGRPVWAGTPWLG*TGLSSWCSRSAGET
Trigger: GGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCCTGCCCAGACAGGCCTTCCCCGCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR CCA 90 bp GCGGGGAAGGCCTGTCTGGGCAGGAACTCCATGGCTGGGCTGGACTaGACTGAGCAGTTGGTGTTCCAGATCTGCCGGGGAGACCAGATC +
Preference number: 1 (lower is better)
Translates to: AGKACLGRNSMAGLD*TEQLVFQICRGDQI
Trigger: GATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCCTGCCCAGACAGGCCTTCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR CCA 90 bp GTCTGGGCAGGAACTCCATGGCTGGGCTGGACTGGACTGAGCAGTTaGTGTTCCAGATCTGCCGGGGAGACCAGATCAACAGCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: VWAGTPWLGWTGLSS*CSRSAGETRSTACL
Trigger: GAGGCAGGCTGTTGATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCCTGCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR GCA 90 bp TCCATGGCTGGGCTGGACTGGACTGAGCAGTTGGTGTTCCAGATCTaGCGGGGAGACCAGATCAACAGCCTGCCTCTTCAGTTTATATCC +
Preference number: 1 (lower is better)
Translates to: SMAGLDWTEQLVFQI*RGDQINSLPLQFIS
Trigger: GGATATAAACTGAAGAGGCAGGCTGTTGATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR CAA 90 bp TGTCTGGGCAGGAACTCCATGGCTGGGCTGGACTGGACTGAGCAGTaGGTGTTCCAGATCTGCCGGGGAGACCAGATCAACAGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: CLGRNSMAGLDWTEQ*VFQICRGDQINSLP
Trigger: AGGCAGGCTGTTGATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCCTGCCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR-3UTR GCA 90 bp GGAACTCCATGGCTGGGCTGGACTGGACTGAGCAGTTGGTGTTCCAGATCTGCCACCAGATCAACAGCCTaGCTCTTCAGTTTATATCCG +
Preference number: 2 (lower is better)
Translates to: GTPWLGWTGLSSWCSRSATRSTA*LFSLYP
Trigger: CGGATATAAACTGAAGAGGCAGGCTGTTGATCTGGT...GGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR TCA 72 bp TCTGGGCAGGAACTCCATGGCTGGGCTGGACTGGACTaGGCAGTTGGTGTTCCAGATCTGCCGGGGAGACCA +
Preference number: 3 (lower is better)
Translates to: SGQELHGWAGLD*AVGVPDLPGRP
Trigger: TGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCCTGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR GCA 72 bp GGGCTGGACTGGACTGAGCAGTTGGTGTTCCAGATCTaGCGGGGAGACCAGATCAACAGCCTGCCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: GLDWTEQLVFQI*RGDQINSLPLQ
Trigger: CTGAAGAGGCAGGCTGTTGATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
3UTR GCA 72 bp TGTTCCAGATCTGCCGGGGAGACCAGATCAACAGCCTaGCTCTTCAGTTTATATCCGGAAGGACTCGCCCAG +
Preference number: 3 (lower is better)
Translates to: CSRSAGETRSTA*LFSLYPEGLAQ
Trigger: CTGGGCGAGTCCTTCCGGATATAAACTGAAGAGGCAGGCTGTTGATCTGGTCTCCCCGGCAGATCTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR TCA 90 bp GGAACTCCATGGCTGGGCTGGACTGGACTGAGCAGTTGGTGTTCCAGATCTGCCTGCCAGCAGGGTGTCTaGGCTGTGCTCAGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: GTPWLGWTGLSSWCSRSACQQGV*AVLRVD
Trigger: ATCGACTCTGAGCACAGCTCAGACACCCTGCTGGCA...GGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR TCA 90 bp GAGACCAGATCAACAGCCTGCCTCTTCAGTTTATATCCGGAAGGACTCGCCCAGCCTTTCCTGTTTTGTTaGGGGTTGCCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ETRSTACLFSLYPEGLAQPFLFC*GLPAGC
Trigger: ACACCCTGCTGGCAACCCTCAACAAAACAGGAAAGG...CTGGGCGAGTCCTTCCGGATATAAACTGAAGAGGCAGGCTGTTGATCTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR GCA 90 bp GGAGACCAGATCAACAGCCTGCCTCTTCAGTTTATATCCGGAAGGACTCGCCCATGTGCTCAGAGTCGATaGAGACCTTCTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GDQINSLPLQFISGRTRPCAQSR*RPSCWA
Trigger: TGCCCAACAAGAAGGTCTGCATCGACTCTGAGCACA...TGGGCGAGTCCTTCCGGATATAAACTGAAGAGGCAGGCTGTTGATCTGGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR CAA 90 bp CTGGACTGGACTGAGCAGTTGGTGTTCCAGATCTGCCGGGGAGACCAGATCAACTTGGGCAGGTCAATGTaGAACTCCACTCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LDWTEQLVFQICRGDQINLGRSM*NSTPPS
Trigger: GCTGGGAGGAGTGGAGTTCAACATTGACCTGCCCAA...GTTGATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR CAA 90 bp CTTTATTACATGGAAGCTTGCAGGGAGCCAGCGGGGAAGGCCTGTCTGGGCAGGACAGCCTTTCCTGTTTaGTTGAGGGTTGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LYYMEACREPAGKACLGRTAFPV*LRVASR
Trigger: CCTGCTGGCAACCCTCAACAAAACAGGAAAGGCTGT...CCTGCCCAGACAGGCCTTCCCCGCTGGCTCCCTGCAAGCTTCCATGTAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS TCA 90 bp GGAAACAGCCTTTCCTGTTTTGTTGAGGGTTGCCAGCAGGGTGTCTaGGCTGTGCTCAGAGTCGATGCAGACCTTCTTGTTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GNSLSCFVEGCQQGV*AVLRVDADLLVGQV
Trigger: GACCTGCCCAACAAGAAGGTCTGCATCGACTCTGAGCACAGCTCAGACACCCTGCTGGCAACCCTCAACAAAACAGGAAAGGCTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR CAA 90 bp TGTCTGGGCAGGAACTCCATGGCTGGGCTGGACTGGACTGAGCAGTTGGTGTTCATGCAGACCTTCTTGTaGGGCAGGTCAATGTTGAAC +
Preference number: 5 (lower is better)
Translates to: CLGRNSMAGLDWTEQLVFMQTFL*GRSMLN
Trigger: GTTCAACATTGACCTGCCCAACAAGAAGGTCTGCAT...GAACACCAACTGCTCAGTCCAGTCCAGCCCAGCCATGGAGTTCCTGCCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR CAA 90 bp GACTGGACTGAGCAGTTGGTGTTCCAGATCTGCCGGGGAGACCAGATCAACAGCTCGATGCAGACCTTCTaGTTGGGCAGGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: DWTEQLVFQICRGDQINSSMQTF*LGRSML
Trigger: CAACATTGACCTGCCCAACAAGAAGGTCTGCATCGA...GCTGTTGATCTGGTCTCCCCGGCAGATCTGGAACACCAACTGCTCAGTCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS-3UTR CAA 90 bp GAGACCAGATCAACAGCCTGCCTCTTCAGTTTATATCCGGAAGGACTCGCCCAGGCCTTTCCTGTTTTGTaGAGGGTTGCCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ETRSTACLFSLYPEGLAQAFPVL*RVASRV
Trigger: CACCCTGCTGGCAACCCTCAACAAAACAGGAAAGGC...CTGGGCGAGTCCTTCCGGATATAAACTGAAGAGGCAGGCTGTTGATCTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS GCA 90 bp GCCTTTCCTGTTTTGTTGAGGGTTGCCAGCAGGGTGTCTGAGCTGTaGTCAGAGTCGATGCAGACCTTCTTGTTGGGCAGGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: AFPVLLRVASRVSEL*SESMQTFLLGRSML
Trigger: CAACATTGACCTGCCCAACAAGAAGGTCTGCATCGACTCTGAGCACAGCTCAGACACCCTGCTGGCAACCCTCAACAAAACAGGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS GCA 72 bp GTTTTGTTGAGGGTTGCCAGCAGGGTGTCTGAGCTGTaGTCAGAGTCGATGCAGACCTTCTTGTTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: VLLRVASRVSEL*SESMQTFLLGR
Trigger: CCTGCCCAACAAGAAGGTCTGCATCGACTCTGAGCACAGCTCAGACACCCTGCTGGCAACCCTCAACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS CAA 90 bp CTGTGCTCAGAGTCGATGCAGACCTTCTTGTTGGGCAGGTCAATGTaGAACTCCACTCCTCCCAGCTTGTTGAGGACTCTGGAGACGGCT +
Preference number: 6 (lower is better)
Translates to: LCSESMQTFLLGRSM*NSTPPSLLRTLETA
Trigger: AGCCGTCTCCAGAGTCCTCAACAAGCTGGGAGGAGTGGAGTTCAACATTGACCTGCCCAACAAGAAGGTCTGCATCGACTCTGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS CAA 72 bp GAGTCGATGCAGACCTTCTTGTTGGGCAGGTCAATGTaGAACTCCACTCCTCCCAGCTTGTTGAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: ESMQTFLLGRSM*NSTPPSLLRTL
Trigger: CAGAGTCCTCAACAAGCTGGGAGGAGTGGAGTTCAACATTGACCTGCCCAACAAGAAGGTCTGCATCGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2
CDS TCA 72 bp CTTTCCTGTTTTGTTGAGGGTTGCCAGCAGGGTGTCTaGGCTGTGCTCAGAGTCGATGCAGACCTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: LSCFVEGCQQGV*AVLRVDADLLV
Trigger: AACAAGAAGGTCTGCATCGACTCTGAGCACAGCTCAGACACCCTGCTGGCAACCCTCAACAAAACAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108857.2