Pregenerated sensors for ATOH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037621Ensembl transcript IDs: ENSMUST00000042646.8, ENSMUST00000206425.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGTGGCAGGTCACTCCTTCCGTTTCTTGGCTCGCCCTTCTGCCTaGAGGGTGCGGGTGCAGCGCTGCACACACTCGGAGAAGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PVAGHSFRFLARPSA*RVRVQRCTHSEKLR Trigger: CCTCAGCTTCTCCGAGTGTGTGCAGCGCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGCCAAGAAACGGAAGGAGTGACCTGCCACAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR GCA 90 bp | CTAGCCTGTGGCAGGTCACTCCTTCCGTTTCTTGGCTCGCCCTTCTaGCTGCAGGGTGCGGGTGCAGCGCTGCACACACTCGGAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LACGRSLLPFLGSPF*LQGAGAALHTLGEA Trigger: AGCTTCTCCGAGTGTGTGCAGCGCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGCCAAGAAACGGAAGGAGTGACCTGCCACAGGCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR GCA 90 bp | CACATCCTGGCCCATTCCCCTGGTCCCTTCCTCCCTAAGTCCTCCTaGCTGGCCTGTCCACAGGCAGCTGCTCTCCAGCAGAGTGCTAAT | + |
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Preference number: 1 (lower is better) Translates to: HILAHSPGPFLPKSS*LACPQAAALQQSAN Trigger: ATTAGCACTCTGCTGGAGAGCAGCTGCCTGTGGACAGGCCAGGCAGGAGGACTTAGGGAGGAAGGGACCAGGGGAATGGGCCAGGATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR GCA 90 bp | CCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGAAGACAACCAGCTaGTCAGGGCCCAGCACAGAGCGAGCACTGGCTTGGAGGGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: PACRGSRKLVSKTTS*SGPSTERALAWRVK Trigger: CTTAACCCTCCAAGCCAGTGCTCGCTCTGTGCTGGGCCCTGAGCAGCTGGTTGTCTTCGAGACAAGCTTCCTAGAGCCACGACAAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR CCA 90 bp | TCTCGAAGACAACCAGCTGCTCAGGGCCCAGCACAGAGCGAGCACTaGCTTGGAGGGTTAAGTGCTTCTGATGGTCACCAGGTGCCCACT | + |
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Preference number: 1 (lower is better) Translates to: SRRQPAAQGPAQSEH*LGGLSASDGHQVPT Trigger: AGTGGGCACCTGGTGACCATCAGAAGCACTTAACCCTCCAAGCCAGTGCTCGCTCTGTGCTGGGCCCTGAGCAGCTGGTTGTCTTCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR TCA 90 bp | GTACACGGGCTGAGTATCTGGCAGCATCTTGAGGAAGACAAGGAATaGGGCTGGTCGTCTCCTGGTGGTCCCAGCTTTCTCCTCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: VHGLSIWQHLEEDKE*GWSSPGGPSFLLSP Trigger: GGGACTGAGGAGAAAGCTGGGACCACCAGGAGACGACCAGCCTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATACTCAGCCCGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR CCA 90 bp | TGGTCCCAGCTTTCTCCTCAGTCCCAACTGGGAAGAGACTCACAGTaGTGTCTGTGGTCTAGCCTGTGGCAGGTCACTCCTTCCGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: WSQLSPQSQLGRDSQ*CLWSSLWQVTPSVS Trigger: AGAAACGGAAGGAGTGACCTGCCACAGGCTAGACCACAGACACCACTGTGAGTCTCTTCCCAGTTGGGACTGAGGAGAAAGCTGGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR TCA 90 bp | GCCCTTGTGCTGGTTCTAAGTGACCCTGAGAGATGGTACACGGGCTaGGTATCTGGCAGCATCTTGAGGAAGACAAGGAATGAGGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: ALVLVLSDPERWYTG*VSGSILRKTRNEAG Trigger: ACCAGCCTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATACTCAGCCCGTGTACCATCTCTCAGGGTCACTTAGAACCAGCACAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR CCA 90 bp | TACTTCAATTTGAAGCAGATGGTTGCACACAGATGTGAACAGCTTTaGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: YFNLKQMVAHRCEQL*PLEHKEQALALNVP Trigger: GGGCACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTGCAACCATCTGCTTCAAATTGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR TCA 90 bp | TTGCCGCTTTTACTTCAATTTGAAGCAGATGGTTGCACACAGATGTaGACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LPLLLQFEADGCTQM*TALASGAQGAGLGF Trigger: AAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTGCAACCATCTGCTTCAAATTGAAGTAAAAGCGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGCTCGCCCTTCTGCCTaGAGGGTGCGGGTGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: QGLGARTVRKISLGHIPGARPSA*RVRVQR Trigger: GCGCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGC...ACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCCACACTCGGAGAAGCTaGGGTTGCTGTGGTCGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GSRAPPSTSSLLVVALGSHTRRS*GCCGRH Trigger: GTGCCGACCACAGCAACCTCAGCTTCTCCGAGTGTG...GCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR CAA 90 bp | GCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTaGTCTCGAAGACAACCAGCTGCTCAGGGCCCAGCACAGAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: APPSTSSLLVVALGS*SRRQPAAQGPAQSE Trigger: CTCGCTCTGTGCTGGGCCCTGAGCAGCTGGTTGTCTTCGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCCAAGGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCCAGGTGCCCACTGCATaGGTTCCTAGCAGTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: EGPRISGSTFHQQPACRGQVPTA*VPSSSA Trigger: AGCACTACTGCTAGGAACCCATGCAGTGGGCACCTG...GCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCCTTGGCCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCGAGGAAGACAAGGAATaGGGCTGGTCGTCTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GSRAPPSTSSLLVVALGSEEDKE*GWSSPG Trigger: ACCAGGAGACGACCAGCCTCATTCCTTGTCTTCCTC...GCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | GGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCCAGGTCAGCCAGCCGTaGCAGGGACAAGATGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: GSRAPPSTSSLLVVALGSQVSQP*QGQDVV Trigger: AACTACATCTTGTCCCTGGCACGGCTGGCTGACCTG...GCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGATGGTCACCAGGTGCCCACTGCATGGGTTCCTAGCAGTAGTGCTAATCCCTGCAGGGTGCGGGTaGAGCGCTGCACACACTCGG | + |
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Preference number: 2 (lower is better) Translates to: LLMVTRCPLHGFLAVVLIPAGCG*SAAHTR Trigger: CCGAGTGTGTGCAGCGCTGCACCCGCACCCTGCAGG...GATTAGCACTACTGCTAGGAACCCATGCAGTGGGCACCTGGTGACCATCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGTCCAAGAAGGAGCCAGGACCCAAAGAGTATCGGGAACAGGAGTCAGAGCTTGGCTCGCCCTTCTaGCTGCAGGGTGCGGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LGSKKEPGPKEYREQESELGSPF*LQGAGA Trigger: TGCACCCGCACCCTGCAGGCAGAAGGGCGAGCCAAG...CTCTGACTCCTGTTCCCGATACTCTTTGGGTCCTGGCTCCTTCTTGGACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGCTGGTCGTCTCCTGGTaGTCCCAGCTTTCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GLGARTVRKISLGHIPGGLVVSW*SQLSPQ Trigger: CTGAGGAGAAAGCTGGGACCACCAGGAGACGACCAG...CCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGAGGCTGGTCGTCTCCTaGTGGTCCCAGCTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RISGSTFHQQPACRGSRKRLVVS*WSQLSP Trigger: AGGAGAAAGCTGGGACCACCAGGAGACGACCAGCCT...CTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTCCCTCCTCTCTCAGGAGGCTTGGGGTCCAAGAAGGAGCCAGGACCCAACAGGAGTCAGAGGTCTaGGTAGCTAATGGGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PLPSSLRRLGVQEGARTQQESEV*VANGKG Trigger: GCCCTTCCCATTAGCTACCCAGACCTCTGACTCCTG...TTGGGTCCTGGCTCCTTCTTGGACCCCAAGCCTCCTGAGAGAGGAGGGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGCCCCTTCCCTCTCTCAGGAGGCTTaGGGTCCAAGAAGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ALASGAQGAGLGFERAPSLSQEA*GPRRSQ Trigger: CTGGCTCCTTCTTGGACCCCAAGCCTCCTGAGAGAG...GGAAGGGGCACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | CTAATGGGAAGGGCCAAGGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGCAGGTGCCCACTGCATaGGTTCCTAGCAGTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LMGRAKDLGLHLPPAACLQVPTA*VPSSSA Trigger: AGCACTACTGCTAGGAACCCATGCAGTGGGCACCTG...CAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCCTTGGCCCTTCCCATTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGCCCCTTCCCCCATTGGTAGGGCAGCAATaGTGTGGTTTTGTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: WPLEHKEQALALNVPLPPLVGQQ*CGFVLL Trigger: CAACAGCACAAAACCACATCATTGCTGCCCTACCAA...TGGGGGAAGGGGCACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR TCA 90 bp | CTAATGGGAAGGGCCAAGGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTTGGTAGGGCAGCAATaGTGTGGTTTTGTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LMGRAKDLGLHLPPAACLLVGQQ*CGFVLL Trigger: CAACAGCACAAAACCACATCATTGCTGCCCTACCAA...CAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCCTTGGCCCTTCCCATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGAAGACAACTGATGGTCACCAGGTaGCCACTGCATGGGTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PSTSSLLVVALGSLSRRQLMVTR*PLHGFL Trigger: TAGGAACCCATGCAGTGGGCACCTGGTGACCATCAG...TTGTCTTCGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAATGATGTGGTTTTGTGCTGTTGGGGCCTCATCCATAATTTCCTTGGACCTTCTGCCTGCAGGGTaGGGGTGCAGCGCTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: AAMMWFCAVGASSIISLDLLPAG*GCSAAH Trigger: GTGTGCAGCGCTGCACCCGCACCCTGCAGGCAGAAG...GTCCAAGGAAATTATGGATGAGGCCCCAACAGCACAAAACCACATCATTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCACCAGGTGCCCACTGCATGGGTTCCTAGCAGTAGTGCTAATCCATCTTTGCTGGTCGTCTCCTGGTaGTCCCAGCTTTCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GHQVPTAWVPSSSANPSLLVVSW*SQLSPQ Trigger: CTGAGGAGAAAGCTGGGACCACCAGGAGACGACCAG...CAAAGATGGATTAGCACTACTGCTAGGAACCCATGCAGTGGGCACCTGGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCAAGAAGGAGCCAGGACCCAAAGAGTATCGGGAACAGGAGTCAGAGGTCTGCAGGAGTCAGAGGTCTaGGTAGCTAATGGGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VQEGARTQRVSGTGVRGLQESEV*VANGKG Trigger: GCCCTTCCCATTAGCTACCCAGACCTCTGACTCCTG...CAGACCTCTGACTCCTGTTCCCGATACTCTTTGGGTCCTGGCTCCTTCTTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTTATCTGGCAGCATCTTaGGGAAGACAAGGAATGAGG | + |
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Preference number: 2 (lower is better) Translates to: QGLGARTVRKISLGHIPGYLAAS*GRQGMR Trigger: CCTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATA...ACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGGTGGTTTTGTGCTGTTaGGGCCTCATCCATAATTTC | + |
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Preference number: 2 (lower is better) Translates to: GSTFHQQPACRGSRKLVSVVLCC*GLIHNF Trigger: GAAATTATGGATGAGGCCCCAACAGCACAAAACCAC...CGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGCCCCTTCCGTGCTAATCCATCTTTaGCTTGAGGTGGACTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: ALASGAQGAGLGFERAPSVLIHL*LEVDLV Trigger: TACCAAGTCCACCTCAAGCCAAAGATGGATTAGCAC...GGAAGGGGCACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGTTAAGTGCTTCTGATGGTCACCAGGTGCCCACTGCATGGGTTCCTAGCTATCTGGCAGCATCTTaGGGAAGACAAGGAATGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGLSASDGHQVPTAWVPSYLAAS*GRQGMR Trigger: CCTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATA...GCTAGGAACCCATGCAGTGGGCACCTGGTGACCATCAGAAGCACTTAACCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTAATGATGTGGTTTTGTaGTGTTGGGGCCTCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: QGLGARTVRKISLGHIPGNDVVL*CWGLIH Trigger: ATGGATGAGGCCCCAACAGCACAAAACCACATCATT...ACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCAAGAAGGAGCCAGGACCCAAAGAGTATCGGGAACAGGAGTCAGAGGTCTGATCCCGGGTGGGGTATaGGGCAATATTGCTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: VQEGARTQRVSGTGVRGLIPGGV*GNIASL Trigger: TAAAGAAGCAATATTGCCCCATACCCCACCCGGGAT...CAGACCTCTGACTCCTGTTCCCGATACTCTTTGGGTCCTGGCTCCTTCTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTGTTGGGGCCTCATCCATAATTTCCTTGGACGATCTCTGTAGAATCTTTAGGCTGGTCGTCTCCTaGTGGTCCCAGCTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CAVGASSIISLDDLCRIFRLVVS*WSQLSP Trigger: AGGAGAAAGCTGGGACCACCAGGAGACGACCAGCCT...AAAGATTCTACAGAGATCGTCCAAGGAAATTATGGATGAGGCCCCAACAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR GCA 72 bp | GCTCGCCCTTCTGCCTGCAGGGTGCGGGTGCAGCGCTaGACACACTCGGAGAAGCTGAGGTTGCTGTGGTCG | + |
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Preference number: 3 (lower is better) Translates to: ARPSACRVRVQR*THSEKLRLLWS Trigger: CGACCACAGCAACCTCAGCTTCTCCGAGTGTGTGCAGCGCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR GCA 72 bp | GCCCATTCCCCTGGTCCCTTCCTCCCTAAGTCCTCCTaGCTGGCCTGTCCACAGGCAGCTGCTCTCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AHSPGPFLPKSS*LACPQAAALQQ Trigger: CTGCTGGAGAGCAGCTGCCTGTGGACAGGCCAGGCAGGAGGACTTAGGGAGGAAGGGACCAGGGGAATGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR GCA 72 bp | GGTCACTCCTTCCGTTTCTTGGCTCGCCCTTCTGCCTaGAGGGTGCGGGTGCAGCGCTGCACACACTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: GHSFRFLARPSA*RVRVQRCTHSE Trigger: CTCCGAGTGTGTGCAGCGCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGCCAAGAAACGGAAGGAGTGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR CCA 72 bp | TGGTCTAGCCTGTGGCAGGTCACTCCTTCCGTTTCTTaGCTCGCCCTTCTGCCTGCAGGGTGCGGGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: WSSLWQVTPSVS*LALLPAGCGCS Trigger: GCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGCCAAGAAACGGAAGGAGTGACCTGCCACAGGCTAGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| 3UTR GCA 72 bp | CGTGGCTCTAGGAAGCTTGTCTCGAAGACAACCAGCTaGTCAGGGCCCAGCACAGAGCGAGCACTGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: RGSRKLVSKTTS*SGPSTERALAW Trigger: CCAAGCCAGTGCTCGCTCTGTGCTGGGCCCTGAGCAGCTGGTTGTCTTCGAGACAAGCTTCCTAGAGCCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR TCA 72 bp | GGCAATAGCCCGCCCCACCAGGCAGAAGGCAAAATCTaGAGTAACCCTGGATGGCAGGAGACGGAGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GNSPPHQAEGKI*SNPGWQETERE Trigger: CTCCCTCTCCGTCTCCTGCCATCCAGGGTTACTTCAGATTTTGCCTTCTGCCTGGTGGGGCGGGCTATTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGTCAGAAAGATTTCCTaGGGGCACATCCCGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QGLGARTVRKISLGHIPGVRKIS*GHIPGG Trigger: CCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGAC...ACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR-3UTR CAA 90 bp | CACACAGATGTGAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTCCTCTCTCAGGAGGCTaGGGGTCCAAGAAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: HTDVNSFGLWSTRSRPWLPLSGG*GSKKEP Trigger: TGGCTCCTTCTTGGACCCCAAGCCTCCTGAGAGAGG...AAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| 3UTR CCA 72 bp | GGACCCAAAGAGTATCGGGAACAGGAGTCAGAGGTCTaGGTAGCTAATGGGAAGGGCCAAGGATCTCGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPKEYREQESEV*VANGKGQGSRA Trigger: AGCCCGAGATCCTTGGCCCTTCCCATTAGCTACCCAGACCTCTGACTCCTGTTCCCGATACTCTTTGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGGTATCTGGCAGCATCTaGAGGAAGACAAGGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: RISGSTFHQQPACRGSRKVSGSI*RKTRNE Trigger: CTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATAC...CTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTAGCAATGATGTGGTTTaGTGCTGTTGGGGCCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: QGLGARTVRKISLGHIPGSNDVV*CCWGLI Trigger: GATGAGGCCCCAACAGCACAAAACCACATCATTGCT...ACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCCCGCCCCACCAGGCAGAAGGCAAAATCTGAAGTAACCCTGGATGGCAGGGTATCTGGCAGCATCTaGAGGAAGACAAGGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: IARPTRQKAKSEVTLDGRVSGSI*RKTRNE Trigger: CTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATAC...CCTGCCATCCAGGGTTACTTCAGATTTTGCCTTCTGCCTGGTGGGGCGGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGAAGACAAAGCAATGATGTGGTTTaGTGCTGTTGGGGCCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: PSTSSLLVVALGSLSRRQSNDVV*CCWGLI Trigger: GATGAGGCCCCAACAGCACAAAACCACATCATTGCT...TTGTCTTCGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR CCA 72 bp | TTGAAGCAGATGGTTGCACACAGATGTGAACAGCTTTaGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LKQMVAHRCEQL*PLEHKEQALAL Trigger: CAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTGCAACCATCTGCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGCGCTTTTACTTCAATTaGAAGCAGATGGTTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: CEQLWPLEHKEQALALNVRFYFN*KQMVAH Trigger: GTGTGCAACCATCTGCTTCAAATTGAAGTAAAAGCG...CACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR TCA 72 bp | CTGGTTCTAAGTGACCCTGAGAGATGGTACACGGGCTaGGTATCTGGCAGCATCTTGAGGAAGACAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVLSDPERWYTG*VSGSILRKTRN Trigger: ATTCCTTGTCTTCCTCAAGATGCTGCCAGATACTCAGCCCGTGTACCATCTCTCAGGGTCACTTAGAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR TCA 72 bp | TGGGTTCCTAGCAGTAGTGCTAATCCATCTTTGGCTTaGGGTGGACTTGGTAGGGCAGCAATGATGTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: WVPSSSANPSLA*GGLGRAAMMWF Trigger: AAACCACATCATTGCTGCCCTACCAAGTCCACCTCAAGCCAAAGATGGATTAGCACTACTGCTAGGAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR TCA 72 bp | TTACTTCAATTTGAAGCAGATGGTTGCACACAGATGTaGACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLQFEADGCTQM*TALASGAQGAG Trigger: GCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTGCAACCATCTGCTTCAAATTGAAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGTCCTCCTGCCTGGCCTGTCCACAGGCAGCTGCTCTCCAGCAGAGTGCTCCTGCAGGGTGCGGGTaGAGCGCTGCACACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSSCLACPQAAALQQSAPAGCG*SAAHTR Trigger: CCGAGTGTGTGCAGCGCTGCACCCGCACCCTGCAGG...AGCACTCTGCTGGAGAGCAGCTGCCTGTGGACAGGCCAGGCAGGAGGACTTAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGCTTGGCTCGCCCTTCTaGCTGCAGGGTGCGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSTFHQQPACRGSRKLVSLGSPF*LQGAGA Trigger: TGCACCCGCACCCTGCAGGCAGAAGGGCGAGCCAAG...CGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGCCCGCGTCCGCTCCCTaGCGTTGGCCAGAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQGLSERFPWGTSRVGYGPASAP*RWPEAS Trigger: GGAGGCTTCTGGCCAACGCCAGGGAGCGGACGCGGG...CCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGTCTGCTGCAGGGCTTTaGTCTCCGTTGAGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGARTVRKISLGHIPGGSAAGL*SPLRRR Trigger: CCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGA...CCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGACAAGGAATGAGGCTGGTCGTCTCCTGGTGGTCCCAGCTTTCTCCTCAGGCTGCGCTGATGGTGTaGACCCGCGTCCGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRQGMRLVVSWWSQLSPQAALMV*TRVRSL Trigger: CAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGC...CTGAGGAGAAAGCTGGGACCACCAGGAGACGACCAGCCTCATTCCTTGTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGCTTTCTCCTCAGTCCCAACTGGGAAGAGACTCACAGTGGTGTCTGTGGCTCGCCCTTCTGCCTaGAGGGTGCGGGTGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VPAFSSVPTGKRLTVVSVARPSA*RVRVQR Trigger: GCGCTGCACCCGCACCCTGCAGGCAGAAGGGCGAGC...CACAGACACCACTGTGAGTCTCTTCCCAGTTGGGACTGAGGAGAAAGCTGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGAAGACAACCCGCGTCCGCTCCCTaGCGTTGGCCAGAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTSSLLVVALGSLSRRQPASAP*RWPEAS Trigger: GGAGGCTTCTGGCCAACGCCAGGGAGCGGACGCGGG...TTGTCTTCGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGTTAAGTGCTTCTGATGGTCACCAGGTGCCCACTGCATGGGTTCCTAGCGGCTTTGATCTCCGTTaGGGCGGCGGTCGCTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLSASDGHQVPTAWVPSGFDLR*GGGRFA Trigger: GGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCC...GCTAGGAACCCATGCAGTGGGCACCTGGTGACCATCAGAAGCACTTAACCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTCCCAGCTTTCTCCTCAGTCCCAACTGGGAAGAGACTCACAGTGGTGTCGGCTTTGATCTCCGTTaGGGCGGCGGTCGCTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGPSFLLSPNWEETHSGVGFDLR*GGGRFA Trigger: GGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCC...GACACCACTGTGAGTCTCTTCCCAGTTGGGACTGAGGAGAAAGCTGGGACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGATGTGAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTCCTCGAAGGCTGCGCTaGTGGTGTGCACCCGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTDVNSFGLWSTRSRPWLPRRLR*WCAPAS Trigger: GGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGG...AAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGGGGCGCACAGCAAGATaGGGGGACGCAGAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQGLSERFPWGTSRVGYGGRTAR*GDAEPA Trigger: AGCAGGCTCTGCGTCCCCGCATCTTGCTGTGCGCCC...CCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGGAGGGTTAAGTGCTTCTGATGGTCACCAGGTGCCCACTGCATGGGTTTGGCGCCGCTGGGGGTaGGAGAGGCGCGGATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLGGLSASDGHQVPTAWVWRRWG*ERRGLC Trigger: ACACAATCCGCGCCTCTCGCACCCCCAGCGGCGCCA...AACCCATGCAGTGGGCACCTGGTGACCATCAGAAGCACTTAACCCTCCAAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGGCAGCGCCTCGAAGGCTaGGCTGATGGTGTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKDCQKDFLGAHPGWGMGQRLEG*ADGVHP Trigger: CGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTG...CCCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGCTTCTGCCTGCAGGGTaGGGGTGCAGCGCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EQGLSERFPWGTSRVGYGLLPAG*GCSAAH Trigger: GTGTGCAGCGCTGCACCCGCACCCTGCAGGCAGAAG...CCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGTCCGCTCCCTGGCGTTaGCCAGAAGCCTCCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQGLSERFPWGTSRVGYGSAPWR*PEASGS Trigger: AGACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGA...CCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| 3UTR CAA 72 bp | GAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTaGGCTTTGAACGTGCCCCTTCCCCCACATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQLWPLEHKEQA*ALNVPLPPHPG Trigger: GCCAGGATGTGGGGGAAGGGGCACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTTGTCTCGTTCAATGCCTGGCTCTaGCTCTGCCCAGCGTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSTFHQQPACRGSRKLVSFNAWL*LCPAYV Trigger: GACGTACGCTGGGCAGAGTCAGAGCCAGGCATTGAA...CGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGGCCCTGGCTGTGTCTGTaGCTCCACCTGGAGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SKDCQKDFLGAHPGWGMGPWLCL*LHLEEP Trigger: CGGTTCCTCCAGGTGGAGGCACAGACACAGCCAGGG...CCCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGAAGGAGCCAGGACCCAAAGAGTATCGGGAACAGGAGTCAGAGGTCTGTGCCAAGCTCTGAGATaGGGGAGGCGGCGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQEGARTQRVSGTGVRGLCQALR*GRRRWR Trigger: ACGCCACCGCCGCCTCCCGCATCTCAGAGCTTGGCA...CAGACCTCTGACTCCTGTTCCCGATACTCTTTGGGTCCTGGCTCCTTCTTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGAGCCTCCGGGTCTGCTaGAGGGCTTTGATCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGARTVRKISLGHIPGGSLRVC*RALISV Trigger: AACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCT...CCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTCCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | GGTCACCAGGTGCCCACTGCATGGGTTCCTAGCAGTAGTGCTAATCCATCTTTGGCTGCGCTGATGGTGTaGACCCGCGTCCGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHQVPTAWVPSSSANPSLAALMV*TRVRSL Trigger: CAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGC...CAAAGATGGATTAGCACTACTGCTAGGAACCCATGCAGTGGGCACCTGGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTCCAAGAAGGAGCCAGGACCCAAAGAGTATCGGGAACAGGAGTCAGAGTCCGCTCCCTGGCGTTaGCCAGAAGCCTCCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSKKEPGPKEYREQESESAPWR*PEASGS Trigger: AGACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGA...CTCTGACTCCTGTTCCCGATACTCTTTGGGTCCTGGCTCCTTCTTGGACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCCCTCCTCTCTCAGGAGGCTTGGGGTCCAAGAAGGAGCCAGGACCCAAGGCACCTTTGTCTCCTaGGTTCAATGCCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPSSLRRLGVQEGARTQGTFVS*VQCLAL Trigger: CAGAGCCAGGCATTGAACCCAGGAGACAAAGGTGCC...TTGGGTCCTGGCTCCTTCTTGGACCCCAAGCCTCCTGAGAGAGGAGGGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
||
| 3UTR CAA 72 bp | TCCACCAGCAGCCTGCTTGTCGTGGCTCTAGGAAGCTaGTCTCGAAGACAACCAGCTGCTCAGGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STSSLLVVALGS*SRRQPAAQGPA Trigger: TGCTGGGCCCTGAGCAGCTGGTTGTCTTCGAGACAAGCTTCCTAGAGCCACGACAAGCAGGCTGCTGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGGTGCGGGTGCAGCGCTaGACACACTCGGAGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CEQLWPLEHKEQALALNVVRVQR*THSEKL Trigger: CAGCTTCTCCGAGTGTGTGCAGCGCTGCACCCGCAC...CACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCAAGAAGGAGCCAGGACCCAAAGAGTATCGGGAACAGGAGTCAGAGGTTGCCCCGGAATTCCCTaGCTGTGTCTGTGCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVQEGARTQRVSGTGVRGCPGIP*LCLCLH Trigger: GTGGAGGCACAGACACAGCCAGGGAATTCCGGGGCA...ACCTCTGACTCCTGTTCCCGATACTCTTTGGGTCCTGGCTCCTTCTTGGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAGTAGTGCTAATCCATCTTTGGCTTGAGGTGGACTTGGTAGGGCAGCAACTCTTGTGGCGCCGCTaGGGGTGCGAGAGGCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAVVLIHLWLEVDLVGQQLLWRR*GCERRG Trigger: TCCGCGCCTCTCGCACCCCCAGCGGCGCCACAAGAG...TTGCTGCCCTACCAAGTCCACCTCAAGCCAAAGATGGATTAGCACTACTGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGATGTGAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTCACACTCGGAGAAGCTaGGGTTGCTGTGGTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTDVNSFGLWSTRSRPWLHTRRS*GCCGRH Trigger: GTGCCGACCACAGCAACCTCAGCTTCTCCGAGTGTG...AAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGGGTCTCCTGGGTTCAATaGCTGGCTCTGACTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKDCQKDFLGAHPGWGMGVSWVQ*LALTLP Trigger: GGGCAGAGTCAGAGCCAGGCATTGAACCCAGGAGAC...CCCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | GTATCTGGCAGCATCTTGAGGAAGACAAGGAATGAGGCTGGTCGTCTCCTGGTGAGAAGCCTCCGGGTCTaGTGCAGGGCTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSGSILRKTRNEAGRLLVRSLRV*CRALIS Trigger: GGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCT...CACCAGGAGACGACCAGCCTCATTCCTTGTCTTCCTCAAGATGCTGCCAGATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGCAATGATGTGGTTTTGTGCTGTTGGGGCCTCATCCATAATTTCCTTGCAGCGCCTCGAAGGCTaGGCTGATGGTGTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAAMMWFCAVGASSIISLQRLEG*ADGVHP Trigger: CGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTG...CAAGGAAATTATGGATGAGGCCCCAACAGCACAAAACCACATCATTGCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGATGGTCACCAGGTGCCCACTGCATGGGTTCCTAGCAGTAGTGCTAATCTGTACACAGCAAGCCTaGTTCCTCAGCGCCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLMVTRCPLHGFLAVVLICTQQA*FLSASK Trigger: CTTCGAGGCGCTGAGGAAGCAGGCTTGCTGTGTACA...GATTAGCACTACTGCTAGGAACCCATGCAGTGGGCACCTGGTGACCATCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGTTGGGGCCTCATCCATAATTTCCTTGGACGATCTCTGTAGAATCTTTGGCGGTCGCTTCGCCTaGCCGTTTCCTAGGCGACGC | + |
|
Preference number: 4 (lower is better) Translates to: CAVGASSIISLDDLCRIFGGRFA*PFPRRR Trigger: GCGTCGCCTAGGAAACGGCCAGGCGAAGCGACCGCC...AAAGATTCTACAGAGATCGTCCAAGGAAATTATGGATGAGGCCCCAACAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGAGGCAATCCTCAGGATaGCCAGTTTGGAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQGLSERFPWGTSRVGYGRQSSG*PVWRAS Trigger: AGAAGCTCTCCAAACTGGCCATCCTGAGGATTGCCT...CCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTTGGGGCCTCATCCATAATTTCCTTGGACGATCTCTGTAGAATCTTTTCTGCTGCAGGGCTTTaGTCTCCGTTGAGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CAVGASSIISLDDLCRIFSAAGL*SPLRRR Trigger: CCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGA...AAAGATTCTACAGAGATCGTCCAAGGAAATTATGGATGAGGCCCCAACAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGCAATGATGTGGTTTTGTGCTGTTGGGGCCTCATCCATAATTTCCTTGAGAAGCCTCCGGGTCTaGTGCAGGGCTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAAMMWFCAVGASSIISLRSLRV*CRALIS Trigger: GGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCT...CAAGGAAATTATGGATGAGGCCCCAACAGCACAAAACCACATCATTGCTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS-3UTR GCA 90 bp | GCAGCAATGATGTGGTTTTGTGCTGTTGGGGCCTCATCCATAATTTCCTTGGACCAGGTCAGCCAGCCGTaGCAGGGACAAGATGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: AAMMWFCAVGASSIISLDQVSQP*QGQDVV Trigger: AACTACATCTTGTCCCTGGCACGGCTGGCTGACCTG...GTCCAAGGAAATTATGGATGAGGCCCCAACAGCACAAAACCACATCATTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| 3UTR CAA 72 bp | TGGTTTTGTGCTGTTGGGGCCTCATCCATAATTTCCTaGGACGATCTCTGTAGAATCTTTGGCAATAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: WFCAVGASSIIS*DDLCRIFGNSP Trigger: CGGGCTATTGCCAAAGATTCTACAGAGATCGTCCAAGGAAATTATGGATGAGGCCCCAACAGCACAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS GCA 90 bp | GAGGCGCGGATTGTGTGGGACGCGCGGGAGGGGCGCACAGCAAGATaGGGGGACGCAGAGCCTGCTCGCGGAAGGAGTGCGCCTCGGGAT | + |
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Preference number: 5 (lower is better) Translates to: EARIVWDAREGRTAR*GDAEPARGRSAPRD Trigger: ATCCCGAGGCGCACTCCTTCCGCGAGCAGGCTCTGCGTCCCCGCATCTTGCTGTGCGCCCCTCCCGCGCGTCCCACACAATCCGCGCCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 90 bp | CACGGCACCTGCTTCCTCAGCGCCTCGAAGGCTGCGCTGATGGTGTaGACCCGCGTCCGCTCCCTGGCGTTGGCCAGAAGCCTCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: HGTCFLSASKAALMV*TRVRSLALARSLRV Trigger: GACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGTGCCGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 90 bp | CAGCAAGCCTGCTTCCTCAGCGCCTCGAAGGCTGCGCTGATGGTGTaGACCCGCGTCCGCTCCCTGGCGTTGGCCAGAAGCCTCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QQACFLSASKAALMV*TRVRSLALARSLRV Trigger: GACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGCTTGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS GCA 90 bp | CCCATAGGAGTAGCACGGCACCTGCTTCCTCAGCGCCTCGAAGGCTaGGCTGATGGTGTGCACCCGCGTCCGCTCCCTGGCGTTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PIGVARHLLPQRLEG*ADGVHPRPLPGVGQ Trigger: CTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGTGCCGTGCTACTCCTATGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS TCA 90 bp | CCTGGCTGTGTCTGTGCCTCCACCTGGAGGAACCGCCGGCGCCACTaGGGCTGGTACTGGGGTCGCGATCGGGAACGGTTGTGTCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PGCVCASTWRNRRRH*GWYWGRDRERLCPV Trigger: GACAGGACACAACCGTTCCCGATCGCGACCCCAGTACCAGCCTCAGTGGCGCCGGCGGTTCCTCCAGGTGGAGGCACAGACACAGCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS TCA 90 bp | GTTGGCCAGAAGCCTCCGGGTCTGCTGCAGGGCTTTGATCTCCGTTaGGGCGGCGGTCGCTTCGCCTGGCCGTTTCCTAGGCGACGCGGA | + |
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Preference number: 5 (lower is better) Translates to: VGQKPPGLLQGFDLR*GGGRFAWPFPRRRG Trigger: TCCGCGTCGCCTAGGAAACGGCCAGGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 90 bp | CAGGCATTGTACACAGCAAGCCTGCTTCCTCAGCGCCTCGAAGGCTaGGCTGATGGTGTGCACCCGCGTCCGCTCCCTGGCGTTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QALYTASLLPQRLEG*ADGVHPRPLPGVGQ Trigger: CTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGCTTGCTGTGTACAATGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS TCA 90 bp | ACGGTTGTGTCCTGTCCCGAAGCCCGTTGGTGGCGGCGGTGGTGCTaGCTGTGGCGCCGAGCTCGGGAGCTTCCAAGTCCAATCGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: TVVSCPEARWWRRWC*LWRRARELPSPIGK Trigger: CTTTCCGATTGGACTTGGAAGCTCCCGAGCTCGGCGCCACAGTCAGCACCACCGCCGCCACCAACGGGCTTCGGGACAGGACACAACCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS TCA 90 bp | CCAGAGCGAAACCGCGTTTGCGCGCGTCAGAGACCTCAGGCGCTCTaGTGCCCCGGAATTCCCTGGCTGTGTCTGTGCCTCCACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PERNRVCARQRPQAL*CPGIPWLCLCLHLE Trigger: CTCCAGGTGGAGGCACAGACACAGCCAGGGAATTCCGGGGCATCAGAGCGCCTGAGGTCTCTGACGCGCGCAAACGCGGTTTCGCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS TCA 90 bp | ATTGTACACAGCAAGCCTGCTTCCTCAGCGCCTCGAAGGCTGCGCTaGTGGTGTGCACCCGCGTCCGCTCCCTGGCGTTGGCCAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: IVHSKPASSAPRRLR*WCAPASAPWRWPEA Trigger: GGCTTCTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGCTTGCTGTGTACAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTTGAACGTGCCCCTTCCCCCAGTCTGCTGCAGGGCTTaGATCTCCGTTGAGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: WPLEHKEQALALNVPLPPVCCRA*ISVEAA Trigger: CGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGAC...TGGGGGAAGGGGCACGTTCAAAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS GCA 90 bp | GGCAGTGGGGACTCAGTTGATGGCAGGCATTGTACACAGCAAGCCTaGTTCCTCAGCGCCTCGAAGGCTGCGCTGATGGTGTGCACCCGC | + |
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Preference number: 5 (lower is better) Translates to: GSGDSVDGRHCTQQA*FLSASKAALMVCTR Trigger: GCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGCTTGCTGTGTACAATGCCTGCCATCAACTGAGTCCCCACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAGGACTGTCAGAAAGATTTCCTTGGGGCACATCCCGGGTGGGGTATGGGCGCCGCACCGGCTCCTaGCCTTTCCGCTTGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: EQGLSERFPWGTSRVGYGRRTGS*PFRLSF Trigger: GAAGCTCAAGCGGAAAGGCAAGGAGCCGGTGCGGCG...CCCATACCCCACCCGGGATGTGCCCCAAGGAAATCTTTCTGACAGTCCTTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 90 bp | GCTGAGGTTGCTGTGGTCGGCACTGTAGTCCAGGTCAGCCAGCCGTaGCAGGGACAAGATGTAGTTACAGGCAATCCTCAGGATGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: AEVAVVGTVVQVSQP*QGQDVVTGNPQDGQ Trigger: CTGGCCATCCTGAGGATTGCCTGTAACTACATCTTGTCCCTGGCACGGCTGGCTGACCTGGACTACAGTGCCGACCACAGCAACCTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCAAGGATCTCGGGCTCCACCTTCCACCAGCAGCCTGCTTGTCGTGGCTTCCGCTTGAGCTTCTaGAGGCCGTTCAGTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: EGPRISGSTFHQQPACRGFRLSF*RPFSSL Trigger: TAAAGAACTGAACGGCCTCAAGAAGCTCAAGCGGAA...GCCACGACAAGCAGGCTGCTGGTGGAAGGTGGAGCCCGAGATCCTTGGCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS CCA 90 bp | CCAGCCGTGCCAGGGACAAGATGTAGTTACAGGCAATCCTCAGGATaGCCAGTTTGGAGAGCTTCTGCCCATAGGAGTAGCACGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: PAVPGTRCSYRQSSG*PVWRASAHRSSTAP Trigger: AGGTGCCGTGCTACTCCTATGGGCAGAAGCTCTCCAAACTGGCCATCCTGAGGATTGCCTGTAACTACATCTTGTCCCTGGCACGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS-3UTR CAA 90 bp | CACACAGATGTGAACAGCTTTGGCCTCTGGAGCACAAGGAGCAGGCCTTGGCTTGCAGTGGGGACTCAGTaGATGGCAGGCATTGTACAC | + |
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Preference number: 5 (lower is better) Translates to: HTDVNSFGLWSTRSRPWLAVGTQ*MAGIVH Trigger: GTGTACAATGCCTGCCATCAACTGAGTCCCCACTGC...AAGCCAAGGCCTGCTCCTTGTGCTCCAGAGGCCAAAGCTGTTCACATCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS-3UTR CAA 90 bp | GCAGCAATGATGTGGTTTTGTGCTGTTGGGGCCTCATCCATAATTTCCTTGGACTCCTTGCCTTTCCGCTaGAGCTTCTTGAGGCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: AAMMWFCAVGASSIISLDSLPFR*SFLRPF Trigger: GAACGGCCTCAAGAAGCTCAAGCGGAAAGGCAAGGA...GTCCAAGGAAATTATGGATGAGGCCCCAACAGCACAAAACCACATCATTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS-3UTR CAA 90 bp | TTGAGGAAGACAAGGAATGAGGCTGGTCGTCTCCTGGTGGTCCCAGCTTTCTCCAAATTACGTGTGAAATaGACGAGTAGGAACTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LRKTRNEAGRLLVVPAFSKLRVK*TSRNFP Trigger: GGGAAAGTTCCTACTCGTCAATTTCACACGTAATTT...GGAGAAAGCTGGGACCACCAGGAGACGACCAGCCTCATTCCTTGTCTTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 72 bp | AGGGCGCACGGGGGACTCTTGTGGCGCCGCTGGGGGTaGGAGAGGCGCGGATTGTGTGGGACGCGCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RAHGGLLWRRWG*ERRGLCGTRGR Trigger: CCTCCCGCGCGTCCCACACAATCCGCGCCTCTCGCACCCCCAGCGGCGCCACAAGAGTCCCCCGTGCGCCCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS CCA 72 bp | GTGGCGCCGCTGGGGGTGCGAGAGGCGCGGATTGTGTaGGACGCGCGGGAGGGGCGCACAGCAAGATGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VAPLGVREARIV*DAREGRTARCG Trigger: CCCGCATCTTGCTGTGCGCCCCTCCCGCGCGTCCCACACAATCCGCGCCTCTCGCACCCCCAGCGGCGCCAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS CAA 90 bp | ACTGGGGTCGCGATCGGGAACGGTTGTGTCCTGTCCCGAAGCCCGTaGGTGGCGGCGGTGGTGCTGACTGTGGCGCCGAGCTCGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: TGVAIGNGCVLSRSP*VAAVVLTVAPSSGA Trigger: AGCTCCCGAGCTCGGCGCCACAGTCAGCACCACCGCCGCCACCAACGGGCTTCGGGACAGGACACAACCGTTCCCGATCGCGACCCCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 72 bp | ATTGTGTGGGACGCGCGGGAGGGGCGCACAGCAAGATaGGGGGACGCAGAGCCTGCTCGCGGAAGGAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: IVWDAREGRTAR*GDAEPARGRSA Trigger: CGCACTCCTTCCGCGAGCAGGCTCTGCGTCCCCGCATCTTGCTGTGCGCCCCTCCCGCGCGTCCCACACAAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 72 bp | GTAGCACGGCACCTGCTTCCTCAGCGCCTCGAAGGCTaGGCTGATGGTGTGCACCCGCGTCCGCTCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VARHLLPQRLEG*ADGVHPRPLPG Trigger: GCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGTGCCGTGCTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS CAA 72 bp | GCGCTGATGGTGTGCACCCGCGTCCGCTCCCTGGCGTaGGCCAGAAGCCTCCGGGTCTGCTGCAGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ALMVCTRVRSLA*ARSLRVCCRAL Trigger: CAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS TCA 72 bp | CGTTGGCCAGAAGCCTCCGGGTCTGCTGCAGGGCTTTaGTCTCCGTTGAGGCGGCGGTCGCTTCGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RWPEASGSAAGL*SPLRRRSLRLA Trigger: GGCCAGGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS TCA 72 bp | AGCAAGCCTGCTTCCTCAGCGCCTCGAAGGCTGCGCTaGTGGTGTGCACCCGCGTCCGCTCCCTGGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SKPASSAPRRLR*WCAPASAPWRW Trigger: CCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGCTTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS GCA 72 bp | GTCCGCTCCCTGGCGTTGGCCAGAAGCCTCCGGGTCTaGTGCAGGGCTTTGATCTCCGTTGAGGCGGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VRSLALARSLRV*CRALISVEAAV Trigger: GACCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS GCA 72 bp | TGCTTCCTCAGCGCCTCGAAGGCTGCGCTGATGGTGTaGACCCGCGTCCGCTCCCTGGCGTTGGCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CFLSASKAALMV*TRVRSLALARS Trigger: GCTTCTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS CAA 72 bp | GCGTTGGCCAGAAGCCTCCGGGTCTGCTGCAGGGCTTaGATCTCCGTTGAGGCGGCGGTCGCTTCGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALARSLRVCCRA*ISVEAAVASPG Trigger: GCCAGGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS CAA 90 bp | CGCTCCCTGGCGTTGGCCAGAAGCCTCCGGGTCTGCTGCAGGGCTTaGATCTCCGTTGAGGCGGCGGTCGCTTCGCCTGGCCGTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: RSLALARSLRVCCRA*ISVEAAVASPGRFL Trigger: TAGGAAACGGCCAGGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAACGCCAGGGAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS GCA 72 bp | TACACAGCAAGCCTGCTTCCTCAGCGCCTCGAAGGCTaGGCTGATGGTGTGCACCCGCGTCCGCTCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: YTASLLPQRLEG*ADGVHPRPLPG Trigger: GCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGAGGCGCTGAGGAAGCAGGCTTGCTGTGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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| CDS CAA 90 bp | TCGAAGGCTGCGCTGATGGTGTGCACCCGCGTCCGCTCCCTGGCGTaGGCCAGAAGCCTCCGGGTCTGCTGCAGGGCTTTGATCTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: SKAALMVCTRVRSLA*ARSLRVCCRALISV Trigger: AACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTTCTGGCCAACGCCAGGGAGCGGACGCGGGTGCACACCATCAGCGCAGCCTTCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS TCA 72 bp | AAGCCTCCGGGTCTGCTGCAGGGCTTTGATCTCCGTTaGGGCGGCGGTCGCTTCGCCTGGCCGTTTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: KPPGLLQGFDLR*GGGRFAWPFPR Trigger: CCTAGGAAACGGCCAGGCGAAGCGACCGCCGCCTCAACGGAGATCAAAGCCCTGCAGCAGACCCGGAGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042646.8 ENSMUST00000206425.2 |
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| CDS CAA 90 bp | CCATTCGCGCGCCGCACCGGCTCCTTGCCTTTCCGCTTGAGCTTCTaGAGGCCGTTCAGTTCTTTAACGCACACAGTCTTCCACGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PFARRTGSLPFRLSF*RPFSSLTHTVFHGP Trigger: CGGGCCGTGGAAGACTGTGTGCGTTAAAGAACTGAACGGCCTCAAGAAGCTCAAGCGGAAAGGCAAGGAGCCGGTGCGGCGCGCGAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS CAA 72 bp | CCATTCGCGCGCCGCACCGGCTCCTTGCCTTTCCGCTaGAGCTTCTTGAGGCCGTTCAGTTCTTTAACGCAC | + |
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Preference number: 6 (lower is better) Translates to: PFARRTGSLPFR*SFLRPFSSLTH Trigger: GTGCGTTAAAGAACTGAACGGCCTCAAGAAGCTCAAGCGGAAAGGCAAGGAGCCGGTGCGGCGCGCGAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS GCA 72 bp | GCTGTGGTCGGCACTGTAGTCCAGGTCAGCCAGCCGTaGCAGGGACAAGATGTAGTTACAGGCAATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AVVGTVVQVSQP*QGQDVVTGNPQ Trigger: CTGAGGATTGCCTGTAACTACATCTTGTCCCTGGCACGGCTGGCTGACCTGGACTACAGTGCCGACCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS CCA 72 bp | CCAGGGACAAGATGTAGTTACAGGCAATCCTCAGGATaGCCAGTTTGGAGAGCTTCTGCCCATAGGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PGTRCSYRQSSG*PVWRASAHRSS Trigger: GCTACTCCTATGGGCAGAAGCTCTCCAAACTGGCCATCCTGAGGATTGCCTGTAACTACATCTTGTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042646.8 |
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| CDS TCA 72 bp | CATATTCACTCAGCCCTTGTACACTGGGCACAAAACTaGCCTCACAAGGCAGTGGGGACTCAGTTGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: HIHSALVHWAQN*PHKAVGTQLMA Trigger: TGCCATCAACTGAGTCCCCACTGCCTTGTGAGGTCAGTTTTGTGCCCAGTGTACAAGGGCTGAGTGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206425.2 |
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