Pregenerated sensors for ATOH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073043Ensembl transcript IDs: ENSMUST00000101351.6
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTaGAGGGATATTTGTCACGGGGCTTCCCGCGCGCTAGGAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QVVANNDHHRPKIKG*RDICHGASRALGRA Trigger: TGCCCTTCCTAGCGCGCGGGAAGCCCCGTGACAAATATCCCTGCACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR CCA 90 bp | AAGTGCGTGTATTCTGGGTCCGCTAGACACACTGCTGGACACACTTaGTGTCTAAGCTCTACAGATACTCTTATCTGCCCCTGCATTTTA | + |
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Preference number: 1 (lower is better) Translates to: KCVYSGSARHTAGHT*CLSSTDTLICPCIL Trigger: TAAAATGCAGGGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGTCTAGCGGACCCAGAATACACGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR CAA 90 bp | GGAGGAAGGGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTaGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GGRGLEELQPSEVKS*LTTITTDQKLKGAG Trigger: CCCTGCACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCCCTTCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR-3UTR GCA 90 bp | AGTACCCAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCCAAAAATTAAAGGGTaGAGGGATATTTGTCACGGG | + |
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Preference number: 2 (lower is better) Translates to: STQCGSQAVGETTSLTNSPKIKG*RDICHG Trigger: CCCGTGACAAATATCCCTGCACCCTTTAATTTTTGG...GGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTGGGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR-3UTR CCA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTAGCATATTGGCAGCATaGACCATGAAACGATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: QCGSQAVGETTSLTNSLISILAA*TMKRCH Trigger: GTGGCATCGTTTCATGGTCCATGCTGCCAATATGCT...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAGGGTGCAGGGATATTaGTCACGGGGCTTCCCGCGC | + |
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Preference number: 3 (lower is better) Translates to: AAVRSQVVANNDHHRPKIRVQGY*SRGFPR Trigger: GCGCGGGAAGCCCCGTGACAAATATCCCTGCACCCT...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR-3UTR CAA 90 bp | ATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGGAAGGGCATTTGGTaGTCTCAGTTTTCAGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: IGRAAAVRSQVVANNDHHRKGIW*SQFSGS Trigger: GCTCCCTGAAAACTGAGACAACCAAATGCCCTTCCT...GTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCATATTGGCAGCATGGACCATGAAACGATGCCACGTAAAGGTACATATAGTAGGAGGAAGGGGATaGGAAGAGCTGCAGCCGTCC | + |
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Preference number: 3 (lower is better) Translates to: SSILAAWTMKRCHVKVHIVGGRG*EELQPS Trigger: GGACGGCTGCAGCTCTTCCAATCCCCTTCCTCCTAC...TATATGTACCTTTACGTGGCATCGTTTCATGGTCCATGCTGCCAATATGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR GCA 72 bp | GCTAACAACGATCACCACAGACCAAAAATTAAAGGGTaGAGGGATATTTGTCACGGGGCTTCCCGCGCGCTA | + |
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Preference number: 3 (lower is better) Translates to: ANNDHHRPKIKG*RDICHGASRAL Trigger: TAGCGCGCGGGAAGCCCCGTGACAAATATCCCTGCACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR CCA 72 bp | TATTCTGGGTCCGCTAGACACACTGCTGGACACACTTaGTGTCTAAGCTCTACAGATACTCTTATCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: YSGSARHTAGHT*CLSSTDTLICP Trigger: GGGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGTCTAGCGGACCCAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR TCA 72 bp | AATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTaGCTAACTCCCTTATTTGTGAGTGAGCGCAACACG | + |
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Preference number: 3 (lower is better) Translates to: NAGLKQLGKQLH*LTPLFVSERNT Trigger: CGTGTTGCGCTCACTCACAAATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR-3UTR CAA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTCATTTTAGCAGCATATaGGCAGCATGGACCATGAAA | + |
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Preference number: 3 (lower is better) Translates to: QCGSQAVGETTSLTNSLIHFSSI*AAWTMK Trigger: TTTCATGGTCCATGCTGCCAATATGCTGCTAAAATG...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR TCA 72 bp | GAAACAACTTCATTGACTAACTCCCTTATTTGTGAGTaGGCGCAACACGCAAGGATGAACTCCCAAGGTATA | + |
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Preference number: 3 (lower is better) Translates to: ETTSLTNSLICE*AQHARMNSQGI Trigger: TATACCTTGGGAGTTCATCCTTGCGTGTTGCGCTCACTCACAAATAAGGGAGTTAGTCAATGAAGTTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATGGGCGGCGCGTGCCGTaGAGAGGCCCTGCAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KGIGRAAAVRSQVVANNDGRRVP*RGPAKW Trigger: CCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCC...ATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | GATATTTGTCACGGGGCTTCCCGCGCGCTAGGAAGGGCATTTGGTTGTCTCAGTTGGTGCGGCTGGGGATaGCGATGGTGGTCCCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: DICHGASRALGRAFGCLSWCGWG*RWWSPN Trigger: GTTGGGGGACCACCATCGCCATCCCCAGCCGCACCA...ACTGAGACAACCAAATGCCCTTCCTAGCGCGCGGGAAGCCCCGTGACAAATATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | GGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACGGTAGCAGGTGGCTGTaGCGTCAGCGGCGGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: GIGRAAAVRSQVVANNDHGSRWL*RQRRDV Trigger: CACGTCCCGCCGCTGACGCCACAGCCACCTGCTACC...GTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | GATATTTGTCACGGGGCTTCCCGCGCGCTAGGAAGGGCATTTGGTTGTCTCAGTGCCGTGCAGAGGCCCTaGAAAGTGGGAGTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: DICHGASRALGRAFGCLSAVQRP*KVGVSQ Trigger: CTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGC...ACTGAGACAACCAAATGCCCTTCCTAGCGCGCGGGAAGCCCCGTGACAAATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | ACACACTGCTGGACACACTTGGTGTCTAAGCTCTACAGATACTCTTATCTGCCCAGCGGCGGGACGTGGTaGGGCTGGGGATGGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: THCWTHLVSKLYRYSYLPSGGTW*GWGWRW Trigger: CCATCGCCATCCCCAGCCGCACCACGTCCCGCCGCT...GGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | GATATTTGTCACGGGGCTTCCCGCGCGCTAGGAAGGGCATTTGGTTGTCTCAGTTCGAAGGCTGGGAAGTaGAAAGCGTCCAGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: DICHGASRALGRAFGCLSSKAGK*KASSCT Trigger: GGTGCAGCTGGACGCTTTGCACTTCCCAGCCTTCGA...ACTGAGACAACCAAATGCCCTTCCTAGCGCGCGGGAAGCCCCGTGACAAATATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | ACACACTGCTGGACACACTTGGTGTCTAAGCTCTACAGATACTCTTATCTGCCCGGGACGTGGTGCGGCTaGGGATGGCGATGGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: THCWTHLVSKLYRYSYLPGTWCG*GWRWWS Trigger: GGACCACCATCGCCATCCCCAGCCGCACCACGTCCC...GGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGAGGCCCTGCAAAGTaGGAGTCAGCCAGGCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: IGRAAAVRSQVVANNDHHRGPAK*ESARRV Trigger: CACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCT...GTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR TCA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTGCTGTTCCCGTACTTTaGCGGGCCCGGGGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: AAVRSQVVANNDHHRPKIAVPVL*RARGSC Trigger: GCAAGAGCCCCGGGCCCGTCAAAGTACGGGAACAGC...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR TCA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTCCTCCCGGGGCTGGCTaGGCCCCAGCTACCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SEVKSLLTTITTDQKLKGPPGAG*APATAE Trigger: CTCTGCGGTAGCTGGGGCTCAGCCAGCCCCGGGAGG...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATAGGCGCGTGGGTCGGTaGTATCCAGGAGGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: KGIGRAAAVRSQVVANNDRRVGR*YPGGTV Trigger: AACTGTCCCTCCTGGATAGCACCGACCCACGCGCCT...ATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | ACACACTGCTGGACACACTTGGTGTCTAAGCTCTACAGATACTCTTATCTGCCCATACTGGGCGGCGCGTaGCGTGCAGAGGCCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: THCWTHLVSKLYRYSYLPILGGA*RAEALQ Trigger: TTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTAT...GGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | AGTACCCAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCGGGCTCGCTGGCGGCTaGAGCCAAGCTCGTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: STQCGSQAVGETTSLTNSGLAGG*SQARPL Trigger: TAGTGGACGAGCTTGGCTGCAGCCGCCAGCGAGCCC...GGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTGGGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | ATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACTCAGCCCGTGCATCCTaGGCCGTTCCCTTGCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: IGRAAAVRSQVVANNDHHSARAS*AVPLRL Trigger: CAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGA...GTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR TCA 90 bp | GGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACGAGGCGGTGCGAAGGTaGTGGTGGTCATTTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GIGRAAAVRSQVVANNDHEAVRR*WWSFLQ Trigger: CTGCAAAAATGACCACCATCACCTTCGCACCGCCTC...GTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR TCA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAGAGGAAGCTGGGCCTaGGAAGCGAGTCCGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: AAVRSQVVANNDHHRPKIRGSWA*EASPAR Trigger: CCTTGCCGGACTCGCTTCTCAGGCCCAGCTTCCTCT...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTGCGTGGTTCAGCCCGTaGATCCTGCGCCGTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: AAVRSQVVANNDHHRPKIAWFSP*ILRRSL Trigger: AAGGGAACGGCGCAGGATGCACGGGCTGAACCACGC...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAGTCAGCCAGGCGCGTaGGTCGGTGCTATCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AAVRSQVVANNDHHRPKISQPGA*VGAIQE Trigger: CTCCTGGATAGCACCGACCCACGCGCCTGGCTGACT...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTCTGGAAGGGGCTCGCTaGCGGCTGCAGCCAAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QCGSQAVGETTSLTNSLILEGAR*RLQPSS Trigger: CGAGCTTGGCTGCAGCCGCCAGCGAGCCCCTTCCAG...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACCCTGTCCTCGAAGGCTaGGAAGTGCAAAGCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IGRAAAVRSQVVANNDHHPVLEG*EVQSVQ Trigger: CTGGACGCTTTGCACTTCCCAGCCTTCGAGGACAGG...GTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | AGTACCCAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCAGCTGGTCGAAGGCGTaGTTCAGCCCGTGCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: STQCGSQAVGETTSLTNSSWSKA*FSPCIL Trigger: CAGGATGCACGGGCTGAACCACGCCTTCGACCAGCT...GGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTGGGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR TCA 90 bp | ATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACACTCCGACAGAGCGTTaGTGTAGATCTGGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: IGRAAAVRSQVVANNDHHTPTER*CRSGPS Trigger: AGATGGCCCAGATCTACATCAACGCTCTGTCGGAGT...GTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTCCCAGCTCGGGAGAATaGAGCAGATACTGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QCGSQAVGETTSLTNSLIPSSGE*SRYWAA Trigger: CGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGG...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | AGCAGCATATTGGCAGCATGGACCATGAAACGATGCCACGTAAAGGTACATATACAGGAGGGACAGTTCTaGCGGGTAGACGGGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSILAAWTMKRCHVKVHIQEGQF*RVDGKV Trigger: GACCTTCCCGTCTACCCGGCAGAACTGTCCCTCCTG...TATATGTACCTTTACGTGGCATCGTTTCATGGTCCATGCTGCCAATATGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | ACACACTGCTGGACACACTTGGTGTCTAAGCTCTACAGATACTCTTATCTGCCCGATGGTGGTCATTTTTaGAGGAAGCTGTGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: THCWTHLVSKLYRYSYLPDGGHF*RKLWAA Trigger: CGCCGCCCACAGCTTCCTGCAAAAATGACCACCATC...GGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTCATAGGAGGAGGCGGTaGGAAGGTGATGGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: AAVRSQVVANNDHHRPKIHRRRR*EGDGGH Trigger: ATGACCACCATCACCTTCGCACCGCCTCCTCCTATG...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTGAATGCAGCAGATACTaGGCGGCGCGTGCCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SEVKSLLTTITTDQKLKGECSRY*AARAVQ Trigger: CTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTC...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | AAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTGCAGGGATACTTACCAGCTCACCCTaGCTGTCAGCCTCGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KSLLTTITTDQKLKGAGILTSSP*LSASSR Trigger: CCGGGACGAGGCTGACAGCCAGGGTGAGCTGGTAAG...TATCCCTGCACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTCTCAGCCCACTCTTCTaGATGCAGCAGGCGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: QCGSQAVGETTSLTNSLILSPLF*MQQAGH Trigger: ATGTCCCGCCTGCTGCATGCAGAAGAGTGGGCTGAG...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | AAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTGCAGGGATACATTCACCTGTTTGCTaGAAGGGGCTCGCTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KSLLTTITTDQKLKGAGIHSPVC*KGLAGG Trigger: GCCGCCAGCGAGCCCCTTCCAGCAAACAGGTGAATG...TATCCCTGCACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR GCA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTCCCCACCCTTCAGCTTaGACAGCTGTTCCCGTACTT | + |
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Preference number: 4 (lower is better) Translates to: SEVKSLLTTITTDQKLKGPHPSA*TAVPVL Trigger: AAGTACGGGAACAGCTGTGCAAGCTGAAGGGTGGGG...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTATAACGTTGCGCAGCTaGTCGAAGGCGTGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SEVKSLLTTITTDQKLKGITLRS*SKAWFS Trigger: GCTGAACCACGCCTTCGACCAGCTGCGCAACGTTAT...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CCA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTCACTTCTGTGGGATCTaGGAGATGTTTTGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: AAVRSQVVANNDHHRPKIHFCGI*EMFCCC Trigger: ACAACAGCAAAACATCTCCCAGATCCCACAGAAGTG...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| 3UTR CAA 72 bp | AGACCAGAGGCAGAGATACGACATTTTAGCAGCATATaGGCAGCATGGACCATGAAACGATGCCACGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEAEIRHFSSI*AAWTMKRCHVK Trigger: CTTTACGTGGCATCGTTTCATGGTCCATGCTGCCAATATGCTGCTAAAATGTCGTATCTCTGCCTCTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CCA 90 bp | AGTACCCAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCGTAGGGTCTCATATTTaGACAGCTTCTTGTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STQCGSQAVGETTSLTNSVGSHI*TASCRC Trigger: ACAACGACAAGAAGCTGTCCAAATATGAGACCCTAC...GGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTGGGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CCA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTTCTCCGTCACTTCTGTaGGATCTGGGAGATGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSLLTTITTDQKLKGSPSLL*DLGDVL Trigger: CAAAACATCTCCCAGATCCCACAGAAGTGACGGAGA...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | TCGTCCCGGGGCGCCGCGGCCTCGGAGGCACCCAGCTCGGGAGAATaGAGCAGATACTGGGCGGCGCGTGCCGTGCAGAGGCCCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSRGAAASEAPSSGE*SRYWAARAVQRPCK Trigger: TTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGGTGCCTCCGAGGCCGCGGCGCCCCGGGACGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | CGGGTAGACGGGAAGGTCTCTCGCCTGCAGGGTAGCAGGTGGCTGTaGCGTCAGCGGCGGGACGTGGTGCGGCTGGGGATGGCGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVDGKVSRLQGSRWL*RQRRDVVRLGMAMV Trigger: CACCATCGCCATCCCCAGCCGCACCACGTCCCGCCGCTGACGCCACAGCCACCTGCTACCCTGCAGGCGAGAGACCTTCCCGTCTACCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | TTCTGCCGGGTAGACGGGAAGGTCTCTCGCCTGCAGGGTAGCAGGTaGCTGTGGCGTCAGCGGCGGGACGTGGTGCGGCTGGGGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FCRVDGKVSRLQGSR*LWRQRRDVVRLGMA Trigger: CGCCATCCCCAGCCGCACCACGTCCCGCCGCTGACGCCACAGCCACCTGCTACCCTGCAGGCGAGAGACCTTCCCGTCTACCCGGCAGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | GCCGCGGCCTCGGAGGCACCCAGCTCGGGAGAATGCAGCAGATACTaGGCGGCGCGTGCCGTGCAGAGGCCCTGCAAAGTGGGAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAASEAPSSGECSRY*AARAVQRPCKVGVS Trigger: GCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGGTGCCTCCGAGGCCGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS TCA 90 bp | CAAAGCGTCCAGCTGCACCGAGTAACCCCCAGAGGAAGCTGGGCCTaGGAAGCGAGTCCGGCAAGGCCCGGGCGGGGTAGGTCTCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSVQLHRVTPRGSWA*EASPARPGRGRSRA Trigger: GGCCCGAGACCTACCCCGCCCGGGCCTTGCCGGACTCGCTTCTCAGGCCCAGCTTCCTCTGGGGGTTACTCGGTGCAGCTGGACGCTTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | CACCCAGCTCGGGAGAATGCAGCAGATACTGGGCGGCGCGTGCCGTaGAGAGGCCCTGCAAAGTGGGAGTCAGCCAGGCGCGTGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HPARENAADTGRRVP*RGPAKWESARRVGR Trigger: CCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | GGAGGCACCCAGCTCGGGAGAATGCAGCAGATACTGGGCGGCGCGTaGCGTGCAGAGGCCCTGCAAAGTGGGAGTCAGCCAGGCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGTQLGRMQQILGGA*RAEALQSGSQPGAW Trigger: CCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGGTGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | GCGTGCCGTGCAGAGGCCCTGCAAAGTGGGAGTCAGCCAGGCGCGTaGGTCGGTGCTATCCAGGAGGGACAGTTCTGCCGGGTAGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ACRAEALQSGSQPGA*VGAIQEGQFCRVDG Trigger: CCCGTCTACCCGGCAGAACTGTCCCTCCTGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | GCAGCAGATACTGGGCGGCGCGTGCCGTGCAGAGGCCCTGCAAAGTaGGAGTCAGCCAGGCGCGTGGGTCGGTGCTATCCAGGAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AADTGRRVPCRGPAK*ESARRVGRCYPGGT Trigger: TGTCCCTCCTGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | GGAGAATGCAGCAGATACTGGGCGGCGCGTGCCGTGCAGAGGCCCTaGAAAGTGGGAGTCAGCCAGGCGCGTGGGTCGGTGCTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GECSRYWAARAVQRP*KVGVSQARGSVLSR Trigger: CCTGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | AGGGTAGCAGGTGGCTGTGGCGTCAGCGGCGGGACGTGGTGCGGCTaGGGATGGCGATGGTGGTCCCCCAACTCTTTTACCTCAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVAGGCGVSGGTWCG*GWRWWSPNSFTSAH Trigger: GTGGGCTGAGGTAAAAGAGTTGGGGGACCACCATCGCCATCCCCAGCCGCACCACGTCCCGCCGCTGACGCCACAGCCACCTGCTACCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | AGTCAGCCAGGCGCGTGGGTCGGTGCTATCCAGGAGGGACAGTTCTaGCGGGTAGACGGGAAGGTCTCTCGCCTGCAGGGTAGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPGAWVGAIQEGQF*RVDGKVSRLQGSRW Trigger: CCACCTGCTACCCTGCAGGCGAGAGACCTTCCCGTCTACCCGGCAGAACTGTCCCTCCTGGATAGCACCGACCCACGCGCCTGGCTGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | TGCAGAGGCCCTGCAAAGTGGGAGTCAGCCAGGCGCGTGGGTCGGTaGTATCCAGGAGGGACAGTTCTGCCGGGTAGACGGGAAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRGPAKWESARRVGR*YPGGTVLPGRREGL Trigger: GAGACCTTCCCGTCTACCCGGCAGAACTGTCCCTCCTGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | GACGGGATAACGTTGCGCAGCTGGTCGAAGGCGTGGTTCAGCCCGTaGATCCTGCGCCGTTCCCTTGCGTTTGCTGCCAGCCTCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DGITLRSWSKAWFSP*ILRRSLAFAASLLC Trigger: GCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | CCGTGCATCCTGCGCCGTTCCCTTGCGTTTGCTGCCAGCCTCCTTTaGTTCTGTACCCCATTCACCTGTTTGCTGGAAGGGGCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCILRRSLAFAASLL*FCTPFTCLLEGARW Trigger: CCAGCGAGCCCCTTCCAGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | CTGGTCGAAGGCGTGGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTaGGTTTGCTGCCAGCCTCCTTTGCTTCTGTACCCCATTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVEGVVQPVHPAPFP*VCCQPPLLLYPIHL Trigger: CAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | CTGTGGGATCTGGGAGATGTTTTGCTGTTGTCCTCCTGTACAGGCTaGAGGATGCCCCCGGGCAGCGAAGGCGACAGGTCCTTCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LWDLGDVLLLSSCTG*RMPPGSEGDRSFCA Trigger: GGCACAGAAGGACCTGTCGCCTTCGCTGCCCGGGGGCATCCTGCAGCCTGTACAGGAGGACAACAGCAAAACATCTCCCAGATCCCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | TCGTTGTTGAAGGACGGGATAACGTTGCGCAGCTGGTCGAAGGCGTaGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTGCGTTTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLKDGITLRSWSKA*FSPCILRRSLAFAA Trigger: GGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTTCAACAACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | GGCGTGGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTGCGTTTGCTaGCAGCCTCCTTTGCTTCTGTACCCCATTCACCTGTTTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVVQPVHPAPFPCVC*QPPLLLYPIHLFAG Trigger: TCCAGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | AGGAGGCGGTGCGAAGGTGATGGTGGTCATTTTTGCAGGAAGCTGTaGGCGGCGGCGGTTGCTCTCCGACATTGGGAGTCTGCAGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RRRCEGDGGHFCRKL*AAAVALRHWESAAT Trigger: AGTTGCTGCAGACTCCCAATGTCGGAGAGCAACCGCCGCCGCCCACAGCTTCCTGCAAAAATGACCACCATCACCTTCGCACCGCCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | GCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTACGGGCCCGGGGCTCTaGCTGAGGCCGCCACAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAVRSQVVANNDHHRPKITGPGL*LRPPQP Trigger: CGGCTGTGGCGGCCTCAGCAAGAGCCCCGGGCCCGT...AATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | GAAGGCGTGGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTGCGTTTaGTGCCAGCCTCCTTTGCTTCTGTACCCCATTCACCTGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGVVQPVHPAPFPCV*CQPPLLLYPIHLFA Trigger: AGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 90 bp | ATCTGGGAGATGTTTTGCTGTTGTCCTCCTGTACAGGCTGCAGGATaGCCCCGGGCAGCGAAGGCGACAGGTCCTTCTGTGCCATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: IWEMFCCCPPVQAAG*PRAAKATGPSVPSS Trigger: CGATGATGGCACAGAAGGACCTGTCGCCTTCGCTGCCCGGGGGCATCCTGCAGCCTGTACAGGAGGACAACAGCAAAACATCTCCCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | TTGCTGCCAGCCTCCTTTGCTTCTGTACCCCATTCACCTGTTTGCTaGAAGGGGCTCGCTGGCGGCTGCAGCCAAGCTCGTCCACTACAA | + |
|
Preference number: 5 (lower is better) Translates to: LLPASFASVPHSPVC*KGLAGGCSQARPLQ Trigger: TTGTAGTGGACGAGCTTGGCTGCAGCCGCCAGCGAGCCCCTTCCAGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 90 bp | GACAGCTTCTTGTCGTTGTTGAAGGACGGGATAACGTTGCGCAGCTaGTCGAAGGCGTGGTTCAGCCCGTGCATCCTGCGCCGTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSFLSLLKDGITLRS*SKAWFSPCILRRSL Trigger: AAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTTCAACAACGACAAGAAGCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | AAGGGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATACCCCACCCTTCAGCTaGCACAGCTGTTCCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: KGIGRAAAVRSQVVANNDTPPFS*HSCSRT Trigger: AGTACGGGAACAGCTGTGCAAGCTGAAGGGTGGGGT...ATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS-3UTR CAA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTAGCTGTTCCCGTACTTaGACGGGCCCGGGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEVKSLLTTITTDQKLKGSCSRT*TGPGLL Trigger: CAAGAGCCCCGGGCCCGTCAAAGTACGGGAACAGCT...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGCATATTGGCAGCATGGACCATGAAACGATGCCACGTAAAGGTACATATAACCCCATTCACCTGTTaGCTGGAAGGGGCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSILAAWTMKRCHVKVHITPFTC*LEGARW Trigger: CCAGCGAGCCCCTTCCAGCAAACAGGTGAATGGGGT...TATATGTACCTTTACGTGGCATCGTTTCATGGTCCATGCTGCCAATATGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | ACACACTGCTGGACACACTTGGTGTCTAAGCTCTACAGATACTCTTATCTGCCCTGCTGCCAGCCTCCTTaGCTTCTGTACCCCATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: THCWTHLVSKLYRYSYLPCCQPP*LLYPIH Trigger: GTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCA...GGGCAGATAAGAGTATCTGTAGAGCTTAGACACCAAGTGTGTCCAGCAGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | GGGATTGGAAGAGCTGCAGCCGTCCGAAGTCAAGTCGTTGCTAACAACGATCACTATTTGGACAGCTTCTaGTCGTTGTTGAAGGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: GIGRAAAVRSQVVANNDHYLDSF*SLLKDG Trigger: CCCGTCCTTCAACAACGACAAGAAGCTGTCCAAATA...GTGATCGTTGTTAGCAACGACTTGACTTCGGACGGCTGCAGCTCTTCCAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | AAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTGCAGGGATAAAGGACGGGATAACGTaGCGCAGCTGGTCGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KSLLTTITTDQKLKGAGIKDGIT*RSWSKA Trigger: CGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTT...TATCCCTGCACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | AGTACCCAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCGACAGCTTCTTGTCGTaGTTGAAGGACGGGATAACG | + |
|
Preference number: 5 (lower is better) Translates to: STQCGSQAVGETTSLTNSDSFLS*LKDGIT Trigger: CGTTATCCCGTCCTTCAACAACGACAAGAAGCTGTC...GGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTGGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTGATCTGGGAGATGTTTaGCTGTTGTCCTCCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: QCGSQAVGETTSLTNSLIDLGDV*LLSSCT Trigger: TGTACAGGAGGACAACAGCAAAACATCTCCCAGATC...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | TCCGAAGTCAAGTCGTTGCTAACAACGATCACCACAGACCAAAAATTAAAGGGTAGCTTCTTGTCGTTGTaGAAGGACGGGATAACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEVKSLLTTITTDQKLKGSFLSL*KDGITL Trigger: CAACGTTATCCCGTCCTTCAACAACGACAAGAAGCT...ACCCTTTAATTTTTGGTCTGTGGTGATCGTTGTTAGCAACGACTTGACTTCGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS-3UTR CAA 90 bp | CAATGCGGGTCTCAAGCAGTTGGGGAAACAACTTCATTGACTAACTCCCTTATTTGTAGGGTCTCATATTaGGACAGCTTCTTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCGSQAVGETTSLTNSLICRVSY*DSFLSL Trigger: CAACGACAAGAAGCTGTCCAAATATGAGACCCTACA...AATAAGGGAGTTAGTCAATGAAGTTGTTTCCCCAACTGCTTGAGACCCGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 72 bp | GGCGCCGCGGCCTCGGAGGCACCCAGCTCGGGAGAATaGAGCAGATACTGGGCGGCGCGTGCCGTGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GAAASEAPSSGE*SRYWAARAVQR Trigger: CCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGGTGCCTCCGAGGCCGCGGCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 72 bp | AGGCCGCCACAGCCGCTTCTCCTTACCAGCTCACCCTaGCTGTCAGCCTCGTCCCGGGGCGCCGCGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RPPQPLLLTSSP*LSASSRGAAAS Trigger: CGAGGCCGCGGCGCCCCGGGACGAGGCTGACAGCCAGGGTGAGCTGGTAAGGAGAAGCGGCTGTGGCGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 72 bp | GTAGCAGGTGGCTGTGGCGTCAGCGGCGGGACGTGGTaGGGCTGGGGATGGCGATGGTGGTCCCCCAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAGGCGVSGGTW*GWGWRWWSPNS Trigger: AGAGTTGGGGGACCACCATCGCCATCCCCAGCCGCACCACGTCCCGCCGCTGACGCCACAGCCACCTGCTAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 72 bp | AGCAGATACTGGGCGGCGCGTGCCGTGCAGAGGCCCTaGAAAGTGGGAGTCAGCCAGGCGCGTGGGTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRYWAARAVQRP*KVGVSQARGSV Trigger: CACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 72 bp | GTAGACGGGAAGGTCTCTCGCCTGCAGGGTAGCAGGTaGCTGTGGCGTCAGCGGCGGGACGTGGTGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VDGKVSRLQGSR*LWRQRRDVVRL Trigger: CAGCCGCACCACGTCCCGCCGCTGACGCCACAGCCACCTGCTACCCTGCAGGCGAGAGACCTTCCCGTCTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 72 bp | ACTGGGCGGCGCGTGCCGTGCAGAGGCCCTGCAAAGTaGGAGTCAGCCAGGCGCGTGGGTCGGTGCTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRRVPCRGPAK*ESARRVGRCYP Trigger: TGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 72 bp | CGGGAGAATGCAGCAGATACTGGGCGGCGCGTGCCGTaGAGAGGCCCTGCAAAGTGGGAGTCAGCCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RENAADTGRRVP*RGPAKWESARR Trigger: GCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 72 bp | GGTGGCTGTGGCGTCAGCGGCGGGACGTGGTGCGGCTaGGGATGGCGATGGTGGTCCCCCAACTCTTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: GGCGVSGGTWCG*GWRWWSPNSFT Trigger: GGTAAAAGAGTTGGGGGACCACCATCGCCATCCCCAGCCGCACCACGTCCCGCCGCTGACGCCACAGCCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS GCA 72 bp | GGCGCGTGGGTCGGTGCTATCCAGGAGGGACAGTTCTaGCGGGTAGACGGGAAGGTCTCTCGCCTGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAWVGAIQEGQF*RVDGKVSRLQG Trigger: ACCCTGCAGGCGAGAGACCTTCCCGTCTACCCGGCAGAACTGTCCCTCCTGGATAGCACCGACCCACGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
||
| CDS CCA 72 bp | GCAGAGGCCCTGCAAAGTGGGAGTCAGCCAGGCGCGTaGGTCGGTGCTATCCAGGAGGGACAGTTCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AEALQSGSQPGA*VGAIQEGQFCR Trigger: CCGGCAGAACTGTCCCTCCTGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGGGCCTCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CCA 72 bp | TCGGAGGCACCCAGCTCGGGAGAATGCAGCAGATACTaGGCGGCGCGTGCCGTGCAGAGGCCCTGCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SEAPSSGECSRY*AARAVQRPCKV Trigger: CACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTGGGTGCCTCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | CCTGCAAAGTGGGAGTCAGCCAGGCGCGTGGGTCGGTaGTATCCAGGAGGGACAGTTCTGCCGGGTAGACGG | + |
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Preference number: 6 (lower is better) Translates to: PAKWESARRVGR*YPGGTVLPGRR Trigger: CCGTCTACCCGGCAGAACTGTCCCTCCTGGATAGCACCGACCCACGCGCCTGGCTGACTCCCACTTTGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | CAGCTCGGGAGAATGCAGCAGATACTGGGCGGCGCGTaGCGTGCAGAGGCCCTGCAAAGTGGGAGTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QLGRMQQILGGA*RAEALQSGSQP Trigger: TGGCTGACTCCCACTTTGCAGGGCCTCTGCACGGCACGCGCCGCCCAGTATCTGCTGCATTCTCCCGAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | ACGTTGCGCAGCTGGTCGAAGGCGTGGTTCAGCCCGTaGATCCTGCGCCGTTCCCTTGCGTTTGCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLRSWSKAWFSP*ILRRSLAFAAS Trigger: GCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 72 bp | CACAGCTGTTCCCGTACTTTGACGGGCCCGGGGCTCTaGCTGAGGCCGCCACAGCCGCTTCTCCTTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: HSCSRTLTGPGL*LRPPQPLLLTS Trigger: GCTGGTAAGGAGAAGCGGCTGTGGCGGCCTCAGCAAGAGCCCCGGGCCCGTCAAAGTACGGGAACAGCTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 72 bp | ACCCCACCCTTCAGCTTGCACAGCTGTTCCCGTACTTaGACGGGCCCGGGGCTCTTGCTGAGGCCGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TPPFSLHSCSRT*TGPGLLLRPPQ Trigger: CTGTGGCGGCCTCAGCAAGAGCCCCGGGCCCGTCAAAGTACGGGAACAGCTGTGCAAGCTGAAGGGTGGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | GGCGTGGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTaGGTTTGCTGCCAGCCTCCTTTGCTTCTGTACCCC | + |
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Preference number: 6 (lower is better) Translates to: GVVQPVHPAPFP*VCCQPPLLLYP Trigger: GGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | GCAGCTGGTCGAAGGCGTGGTTCAGCCCGTGCATCCTaGGCCGTTCCCTTGCGTTTGCTGCCAGCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: AAGRRRGSARAS*AVPLRLLPASF Trigger: AAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CCA 72 bp | AAGGACGGGATAACGTTGCGCAGCTGGTCGAAGGCGTaGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: KDGITLRSWSKA*FSPCILRRSLA Trigger: CGCAAGGGAACGGCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 90 bp | TTCAGCTTGCACAGCTGTTCCCGTACTTTGACGGGCCCGGGGCTCTaGCTGAGGCCGCCACAGCCGCTTCTCCTTACCAGCTCACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FSLHSCSRTLTGPGL*LRPPQPLLLTSSPW Trigger: CCAGGGTGAGCTGGTAAGGAGAAGCGGCTGTGGCGGCCTCAGCAAGAGCCCCGGGCCCGTCAAAGTACGGGAACAGCTGTGCAAGCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 90 bp | TGGCGGCTGCAGCCAAGCTCGTCCACTACAACCCCACCCTTCAGCTaGCACAGCTGTTCCCGTACTTTGACGGGCCCGGGGCTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WRLQPSSSTTTPPFS*HSCSRTLTGPGLLL Trigger: CAGCAAGAGCCCCGGGCCCGTCAAAGTACGGGAACAGCTGTGCAAGCTGAAGGGTGGGGTTGTAGTGGACGAGCTTGGCTGCAGCCGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | CTGGGAGATGTTTTGCTGTTGTCCTCCTGTACAGGCTaGAGGATGCCCCCGGGCAGCGAAGGCGACAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LGDVLLLSSCTG*RMPPGSEGDRS Trigger: GGACCTGTCGCCTTCGCTGCCCGGGGGCATCCTGCAGCCTGTACAGGAGGACAACAGCAAAACATCTCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 90 bp | CCCGTGCATCCTGCGCCGTTCCCTTGCGTTTGCTGCCAGCCTCCTTaGCTTCTGTACCCCATTCACCTGTTTGCTGGAAGGGGCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVHPAPFPCVCCQPP*LLYPIHLFAGRGSL Trigger: CAGCGAGCCCCTTCCAGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | CATTCACCTGTTTGCTGGAAGGGGCTCGCTGGCGGCTaGAGCCAAGCTCGTCCACTACAACCCCACCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HSPVCWKGLAGG*SQARPLQPHPS Trigger: TGAAGGGTGGGGTTGTAGTGGACGAGCTTGGCTGCAGCCGCCAGCGAGCCCCTTCCAGCAAACAGGTGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | CAGCCCGTGCATCCTGCGCCGTTCCCTTGCGTTTGCTaGCAGCCTCCTTTGCTTCTGTACCCCATTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: QPVHPAPFPCVC*QPPLLLYPIHL Trigger: CAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | GTTCAGCCCGTGCATCCTGCGCCGTTCCCTTGCGTTTaGTGCCAGCCTCCTTTGCTTCTGTACCCCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: VQPVHPAPFPCV*CQPPLLLYPIH Trigger: GTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | TGGTCATTTTTGCAGGAAGCTGTGGGCGGCGGCGGTTaGTCTCCGACATTGGGAGTCTGCAGCAACTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: WSFLQEAVGGGG*SPTLGVCSNSD Trigger: GTCGGAGTTGCTGCAGACTCCCAATGTCGGAGAGCAACCGCCGCCGCCCACAGCTTCCTGCAAAAATGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | ATGTTTTGCTGTTGTCCTCCTGTACAGGCTGCAGGATaGCCCCGGGCAGCGAAGGCGACAGGTCCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: MFCCCPPVQAAG*PRAAKATGPSV Trigger: CACAGAAGGACCTGTCGCCTTCGCTGCCCGGGGGCATCCTGCAGCCTGTACAGGAGGACAACAGCAAAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CCA 72 bp | TTGTCGTTGTTGAAGGACGGGATAACGTTGCGCAGCTaGTCGAAGGCGTGGTTCAGCCCGTGCATCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSLLKDGITLRS*SKAWFSPCILR Trigger: GCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTTCAACAACGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 72 bp | GGTTCAGCCCGTGCATCCTGCGCCGTTCCCTTGCGTTaGCTGCCAGCCTCCTTTGCTTCTGTACCCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: GSARASCAVPLR*LPASFASVPHS Trigger: TGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGGATGCACGGGCTGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 72 bp | GTGGTCATTTTTGCAGGAAGCTGTGGGCGGCGGCGGTaGCTCTCCGACATTGGGAGTCTGCAGCAACTCCGA | + |
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Preference number: 6 (lower is better) Translates to: VVIFAGSCGRRR*LSDIGSLQQLR Trigger: TCGGAGTTGCTGCAGACTCCCAATGTCGGAGAGCAACCGCCGCCGCCCACAGCTTCCTGCAAAAATGACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | CTGCGCCGTTCCCTTGCGTTTGCTGCCAGCCTCCTTTaGTTCTGTACCCCATTCACCTGTTTGCTGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LRRSLAFAASLL*FCTPFTCLLEG Trigger: CCCTTCCAGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CCA 72 bp | TGCGAAGGTGATGGTGGTCATTTTTGCAGGAAGCTGTaGGCGGCGGCGGTTGCTCTCCGACATTGGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: CEGDGGHFCRKL*AAAVALRHWES Trigger: AGACTCCCAATGTCGGAGAGCAACCGCCGCCGCCCACAGCTTCCTGCAAAAATGACCACCATCACCTTCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 72 bp | CCTGCGCCGTTCCCTTGCGTTTGCTGCCAGCCTCCTTaGCTTCTGTACCCCATTCACCTGTTTGCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PAPFPCVCCQPP*LLYPIHLFAGR Trigger: CCTTCCAGCAAACAGGTGAATGGGGTACAGAAGCAAAGGAGGCTGGCAGCAAACGCAAGGGAACGGCGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 72 bp | GACAGCTTCTTGTCGTTGTTGAAGGACGGGATAACGTaGCGCAGCTGGTCGAAGGCGTGGTTCAGCCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: DSFLSLLKDGIT*RSWSKAWFSPC Trigger: GCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTTCAACAACGACAAGAAGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS CAA 90 bp | TCATATTTGGACAGCTTCTTGTCGTTGTTGAAGGACGGGATAACGTaGCGCAGCTGGTCGAAGGCGTGGTTCAGCCCGTGCATCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SYLDSFLSLLKDGIT*RSWSKAWFSPCILR Trigger: GCGCAGGATGCACGGGCTGAACCACGCCTTCGACCAGCTGCGCAACGTTATCCCGTCCTTCAACAACGACAAGAAGCTGTCCAAATATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS GCA 72 bp | ACTCTCCGTCACTTCTGTGGGATCTGGGAGATGTTTTaGTGTTGTCCTCCTGTACAGGCTGCAGGATGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TLRHFCGIWEMF*CCPPVQAAGCP Trigger: GGGGCATCCTGCAGCCTGTACAGGAGGACAACAGCAAAACATCTCCCAGATCCCACAGAAGTGACGGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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| CDS TCA 72 bp | CGACATTGGGAGTCTGCAGCAACTCCGACAGAGCGTTaGTGTAGATCTGGGCCATCTGTAGGGTCTCATATT | + |
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Preference number: 6 (lower is better) Translates to: RHWESAATPTER*CRSGPSVGSHI Trigger: AATATGAGACCCTACAGATGGCCCAGATCTACATCAACGCTCTGTCGGAGTTGCTGCAGACTCCCAATGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101351.6 |
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