Pregenerated sensors for ATN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004263Ensembl transcript IDs: ENSMUST00000088357.12, ENSMUST00000146872.3
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCCTCCCTCTACCCAGCTaGAGGAGCTCTGCAAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPLPLPS*RSSASG Trigger: CCCGCTTGCAGAGCTCCTGCAGCTGGGTAGAGGGAG...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTGGATGAAGGAGCAGTaGGTGCTGTCTGGATCGCAG | + |
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Preference number: 2 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGWMKEQ*VLSGSQ Trigger: CTGCGATCCAGACAGCACCCACTGCTCCTTCATCCA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTGGTCCTCCAAGGTCTaGATGAAGGAGCAGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGWSSKV*MKEQWV Trigger: CACCCACTGCTCCTTCATCCAGACCTTGGAGGACCA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCGGGGCAGCACACAATaGTACGCAAAACAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGRGSTQ*YAKQPH Trigger: ATGTGGCTGTTTTGCGTAGCATTGTGTGCTGCCCCG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| 3UTR-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCCCCCGGGCCCTGACCTaGTCTGTCCCTTCTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPPRALT*SVPSSL Trigger: GAGGGAAGAAGGGACAGACAAGGTCAGGGCCCGGGG...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| 3UTR GCA 72 bp | CAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTaGACTTTCTGCCCCCACCCTTGCCACTTCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: QGIGGGTWSKIL*TFCPHPCHFPP Trigger: AGGTGGGAAGTGGCAAGGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGGATCCGGGTAAGGTaGGACCCTGAGGCCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGIRVR*DPEARG Trigger: CCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGCTAGGGGCACCCACTaGGGAGGCAGCGGCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLARGTH*GGSGSP Trigger: GGGGGAGCCGCTGCCTCCTCAGTGGGTGCCCCTAGC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTGCGCGCGCACGAGTTaGAGCCGCGGTCCAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGCARTS*SRGPSA Trigger: AGCACTTGGACCGCGGCTTCAACTCGTGCGCGCGCA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTCCAGCGCCAAGCGCTaGAGCTCAGCTGACTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGSSAKR*SSADCA Trigger: CGCGCAGTCAGCTGAGCTGCAGCGCTTGGCGCTGGA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGTCCCTGGGCCTGCTaGCGGAGAGGTGCCTCGATA | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGPWAC*RRGASI Trigger: TATCGAGGCACCTCTCCGCCAGCAGGCCCAGGGACC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCCGTTCTCGGGCAGCTaGGTCGCTGCTGTACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGPFSGS*VAAVQG Trigger: GCCCTGTACAGCAGCGACCCAGCTGCCCGAGAACGG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGGGAGGGTCCCAGCTaGGTAGGGGATCCGGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGEGPS*VGDPGK Trigger: CTTACCCGGATCCCCTACCCAGCTGGGACCCTCCCC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGAGGCCCGGCCCCTTaGTCTCAGCTCTTCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGGPAP*SQLFPG Trigger: CCCCGGGAAGAGCTGAGATCAAGGGGCCGGGCCTCC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGACTGGGTGGCTTTGCTaGAGGAGCACCACTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGTGWLC*RSTTGP Trigger: GGGGCCAGTGGTGCTCCTCCAGCAAAGCCACCCAGT...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCCCCTGCCCCATGGCATaGGGAGAGGGCAGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPPCPMA*GEGRCP Trigger: TGGGCATCTGCCCTCTCCCCATGCCATGGGGCAGGG...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGCACTGCTGGATGTGCTaGCCCCTCCAGGGGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLHCWMC*PLQGRP Trigger: GGGCCTCCCCTGGAGGGGTCAGCACATCCAGCAGTG...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTCGGTGAACCTGGTTTaGAGGTCCCTGGGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGSVNLV*RSLGLL Trigger: CAGCAGGCCCAGGGACCTTCAAACCAGGTTCACCGA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGCCCCAGGCTCGGATaGAAAGGGAAAGGATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGPRLG*KGKGCR Trigger: CCTGCATCCTTTCCCTTTTCATCCGAGCCTGGGGCC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTGGGAGTGCTGGTGGTaGTGGGGAGTCACGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGWECWW*WGVTLS Trigger: GCTCAACGTGACTCCCCATCACCACCAGCACTCCCA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGTAAGGTGAGACCCTaGGGCCAGGGGGTCAATGAG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGKVRP*GQGVNE Trigger: CTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGTTCTCGTGCAGAGGGTaGGGAAGAAGGGGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGFSCRG*GRRGLG Trigger: CCCCAACCCCCTTCTTCCTCACCCTCTGCACGAGAA...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGCGCTGCAGCTCAGCTaGCTGCGCGTGCATGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPALQLS*LRVHGL Trigger: CAGGCCATGCACGCGCAGTCAGCTGAGCTGCAGCGC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCGCTCCGGCCCTGCTTaGTGGCCTTTGGGGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPRSGPA*WPLGQR Trigger: CCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCTGGGAAGGGGTAGGATaGTCCTTGGGGGCCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPWEGVG*SLGALG Trigger: TCCCAGGGCCCCCAAGGAGCATCCTACCCCTTCCCA...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGAAGGTCCCTGGGCCTaGTGGCGGAGAGGTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLEGPWA*WRRGAS Trigger: CGAGGCACCTCTCCGCCAGCAGGCCCAGGGACCTTC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGAAGCCCCGGGTCCACTaGCCCCAAGGGCACATAGAA | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGKPRVH*PQGHIE Trigger: TTCTATGTGCCCTTGGGGGCAGTGGACCCGGGGCTT...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGGAAGGAGGGAAGAGTaGAGGTGGGTGGTAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPGRREE*RWVVGA Trigger: CGCCCCTACCACCCACCTCCACTCTTCCCTCCTTCC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCACTGGAGCACTGGGTaGCTTTGCTGGAGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGHWSTG*LCWRST Trigger: GGTGCTCCTCCAGCAAAGCCACCCAGTGCTCCAGTG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCACCCACTGGAGCACTaGGTGGCTTTGCTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGHPLEH*VALLEE Trigger: CTCCTCCAGCAAAGCCACCCAGTGCTCCAGTGGGTG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGCCTCGATAGCCGGGTaGGGTCCCTGTTCTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGASIAG*GPCSEG Trigger: TCCTTCAGAACAGGGACCCCACCCGGCTATCGAGGC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGCTTCTTGGCCAGCTTaGAGCCCTCCAGCGGCACGA | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPASWPA*SPPAAR Trigger: TCGTGCCGCTGGAGGGCTCCAAGCTGGCCAAGAAGC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGGCTCCTGTTTGATCTaGGTGGCGGTCAGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPGSCLI*VAVRGG Trigger: GCCGCCCCTGACCGCCACGCAGATCAAACAGGAGCC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTCCGGCCCTGCTTGCTaGCCTTTGGGGCAGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPSGPAC*PLGQRA Trigger: AGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGGTGACTGGAGGGACTaGTGGGAAGGGGTAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPGDWRD*WEGVGC Trigger: GCATCCTACCCCTTCCCACCAGTCCCTCCAGTCACC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCTTGAACCTGGCTGACTaGCTGGCATGGCTGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPLNLAD*LAWLGT Trigger: CGTGCCCAGCCATGCCAGCCAGTCAGCCAGGTTCAA...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGTCCGCGCGCTTCTTaGCCAGCTTGGAGCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGPRAS*PAWSPP Trigger: TGGAGGGCTCCAAGCTGGCCAAGAAGCGCGCGGACC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAGATGGGCACTCCACTaGAGCACGGCCCTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPRWALH*STALLG Trigger: GCCCAGGAGGGCCGTGCTCCAGTGGAGTGCCCATCT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCCACTGGACCCAGAGATaGGCACTCCACTGGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPHWTQR*ALHWST Trigger: CGTGCTCCAGTGGAGTGCCCATCTCTGGGTCCAGTG...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCAGACCCCAGGGAGGGTaGCATGTTGTAAGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPRPQGG*HVVRVC Trigger: GCACACCCTTACAACATGTCACCCTCCCTGGGGTCT...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGTCGGGCGTATTCACTaGGAGTGCGCAAGGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPVGRIH*ECARPE Trigger: CTCCGGCCTTGCGCACTCTCAGTGAATACGCCCGAC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCAGCTGATGAGCCGCTaGCATTGGAGCAGAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGQLMSR*HWSRKG Trigger: TCCCTTTCTGCTCCAATGTCAGCGGCTCATCAGCTG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGAGTCATTTTCCACGCTaGCCGGGCTGTAGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGSHFPR*PGCRCW Trigger: CCAGCATCTACAGCCCGGGCAGCGTGGAAAATGACT...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGAACTAGAAGAGGCTaGGGCAGAGCTACTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGTRRG*GRATGG Trigger: TCCTCCAGTAGCTCTGCCGCAGCCTCTTCTAGTTCC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGGATGGGGCTCTCTTaGTGTACTGAGGGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGMGLS*CTEGAQ Trigger: CTGGGCCCCCTCAGTACAGCAAGAGAGCCCCATCCC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGGGCAGCTGGGTCGCTaGTGTACAGGGCTGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPGQLGR*CTGLGH Trigger: ATGTCCCAGCCCTGTACAGCAGCGACCCAGCTGCCC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGATCATTGCCCAGGGCTaGCACCCTTTCTGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGIIAQG*HPFCML Trigger: CAGCATGCAGAAAGGGTGGCAGCCCTGGGCAATGAT...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGGGCTAGTGGATCATTaGCCAGGGCTGCCACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPGLVDH*PGLPPF Trigger: AAAGGGTGGCAGCCCTGGGCAATGATCCACTAGCCC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCGGTTTTGGTCTTTTTaGGCGCACTGGTCTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGRFWSF*AHWSPR Trigger: GCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGCTCCCACCACCCACTaGAGCACTGGGTGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPAPTTH*STGWLC Trigger: GCAAAGCCACCCAGTGCTCCAGTGGGTGGTGGGAGC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGAGAAGGGGCCAGGGTTaGACCCTTCTCTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLRRGQG*TLLWAR Trigger: CCTGGCCCAGAGAAGGGTCCAACCCTGGCCCCTTCT...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGAGGATACGCTCCGGGTaGAGGGGGCCCAGAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLRIRSG*RGPRVS Trigger: GGAAACTCTGGGCCCCCTCCACCCGGAGCGTATCCT...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCTGTATCCAGGCGGGGTaGCTGTCTTGTAGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPCIQAG*LSCRTL Trigger: CAGGGTCCTACAAGACAGCCACCCCGCCTGGATACA...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCACTGGCTGGCATGGCTaGGCACGTCCACCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPTGWHG*ARPPPW Trigger: CCAAGGTGGTGGACGTGCCCAGCCATGCCAGCCAGT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCACCTGGCTGACTGGCTaGCATGGCTGGGCACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPTWLTG*HGWARP Trigger: TGGACGTGCCCAGCCATGCCAGCCAGTCAGCCAGGT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGAGGCCGATGGGGCACTaGACCCAGAGATGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLRPMGH*TQRWAL Trigger: GAGTGCCCATCTCTGGGTCCAGTGCCCCATCGGCCT...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAGGCTGAGGCATTGTTaGGGGGTCTCAGGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPRLRHC*GVSGQV Trigger: CACCTGCCCTGAGACCCCTCAACAATGCCTCAGCCT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGCCTTCTTGGCTGTCTaGCTGGACTTCTCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGAFLAV*LDFSAL Trigger: CAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTGCCCGGGCTGTAGATaGTGGGGGATGTGCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPCPGCR*WGMCFG Trigger: ACCGAAGCACATCCCCCAGCATCTACAGCCCGGGCA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAGCACTGGGTGGCTTTaGTGGAGGAGCACCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPSTGWL*WRSTTG Trigger: GCCAGTGGTGCTCCTCCAGCAAAGCCACCCAGTGCT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAGTCCACTCATGCCCTaGCCCATGGCATGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPSPLMP*PMAWGE Trigger: CTCTCCCCATGCCATGGGGCAGGGCATGAGTGGACT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGAGGAAGTCCACTCATaGCCTGCCCCATGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLEEVHS*PAPWHG Trigger: CCCATGCCATGGGGCAGGGCATGAGTGGACTTCCTC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGGGACCATTGGGACCTaGTTGGTTATAGGACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGGTIGT*LVIGHL Trigger: CAGGTGTCCTATAACCAAGCAGGTCCCAATGGTCCC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGGGCCAGTTTCACACTaGGCTCCAGCTCGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPGPVSH*APARAL Trigger: AAGAGCGCGAGCTGGAGCGCAGTGTGAAACTGGCCC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGCATGTAGCCACTGCTaGTGTTCCAGCGCCAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLACSHC*CSSAKR Trigger: GCGCTTGGCGCTGGAACAGCAGCAGTGGCTACATGC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGGAGGAGGTGGACCCTaGCTCCACACAGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPGGGGP*LHTAWD Trigger: ATCCCAAGCTGTGTGGAGCCAGGGTCCACCTCCTCC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGATGGGTGTTGTTGTTaGCCAAGAGGCGGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPDGCCC*PRGGHR Trigger: CCTATGGCCGCCTCTTGGCCAACAACAACACCCATC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCAGGAGGGAAAGGGCCTaGATGGGTGTTGTTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPRRERA*MGVVVG Trigger: GCCAACAACAACACCCATCCAGGCCCTTTCCCTCCT...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCATGTGTAGGGGCTGCTaGGTGGGCTGTAGATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPMCRGC*VGCRLT Trigger: GGTCAATCTACAGCCCACCCAGCAGCCCCTACACAT...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGCTCCTTGGGGGCCCTaGGATGAAGAGGGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLAPWGP*DEEGCE Trigger: TTCACACCCCTCTTCATCCCAGGGCCCCCAAGGAGC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCTGAGGGGGCCCAGGTaGCGAAGCTGTTTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPLRGPR*RSCFVA Trigger: GGCTACAAAACAGCTTCGCCACCTGGGCCCCCTCAG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGTGGTTTGAAGGTCCCTaGGCCTGCTGGCGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLWFEGP*ACWRRG Trigger: ACCTCTCCGCCAGCAGGCCCAGGGACCTTCAAACCA...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGGCTGCTGTACAGGGCTaGGACATTGTAACCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGAAVQG*DIVTQK Trigger: CTTCTGGGTTACAATGTCCCAGCCCTGTACAGCAGC...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCTTATTGAACCTGGCTaGCTGGCTGGCATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPLIEPG*LAGMAG Trigger: CCCAGCCATGCCAGCCAGTCAGCCAGGTTCAATAAG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCAGATGCTGGGGGATGTaGTTCGGTTGTCCTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPRCWGM*FGCPGL Trigger: TAGACCAGGACAACCGAAGCACATCCCCCAGCATCT...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCTGCTTGCTGGCCTTTaGGGCAGAGGGCTCCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPLLAGL*GRGLLY Trigger: ATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGCCGGGCTGTAGATGCTaGGGGATGTGCTTCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLPGCRC*GMCFGC Trigger: ACAACCGAAGCACATCCCCCAGCATCTACAGCCCGG...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGCCAGGTGGTGGGCCCTaGAATAATCTCGATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLPGGGP*NNLDVG Trigger: CCCCACATCGAGATTATTCCAGGGCCCACCACCTGG...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAATTGGGGTAGTGGGTaGGGGGTGTTGCTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPNWGSG*GVLLAS Trigger: GGAGGCAAGCAACACCCCCCACCCACTACCCCAATT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGGTTGGACCCTTCTCTaGGCCAGGAGGAAGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPGWTLL*ARRKST Trigger: AGTGGACTTCCTCCTGGCCCAGAGAAGGGTCCAACC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTGGCTCCACACAGCTTaGGATGGGAGAGAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPWLHTA*DGREGW Trigger: CCAGCCTTCTCTCCCATCCCAAGCTGTGTGGAGCCA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGACAGGCCAGAGGATaGGTCCGAGTCATTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGQARG*VRVIFH Trigger: GTGGAAAATGACTCGGACTCATCCTCTGGCCTGTCC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGCGGCACAGAAGGATaGGGTTCAAAGCCAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGGTEG*GSKPDS Trigger: AGAGTCTGGCTTTGAACCTCATCCTTCTGTGCCGCC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGCCAGGAGACATGACATaGGGTCGGGCGTATTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLPGDMT*GRAYSL Trigger: CAGTGAATACGCCCGACCTCATGTCATGTCTCCTGG...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGCAGCAAAAAGCTGGTaGCGAAGAACTTCGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPAAKSW*RRTSFS Trigger: CGAGAACGAAGTTCTTCGTCACCAGCTTTTTGCTGC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCACCCTTTCTGCATGCTaGCTTTCAGCTGCCAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPTLSAC*LSAANR Trigger: GCGGTTGGCAGCTGAAAGGCAGCATGCAGAAAGGGT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGCTATCCGGGCCTTCTTaGCTGTCTGCCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLLSGPS*LSAWTS Trigger: AGAAGTCCAGGCAGACAGCCAAGAAGGCCCGGATAG...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCTGCGGCAGAGCTACTaGAGGATGAATATGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGLRQSY*RMNMDI Trigger: GATATCCATATTCATCCTCCAGTAGCTCTGCCGCAG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGAGGAATGAGGATAACTaGGCAGGGCCTGGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLRNEDN*AGPGKQ Trigger: CTGCTTCCCAGGCCCTGCCCAGTTATCCTCATTCCT...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCCACACAGCTTGGGATaGGAGAGAAGGCTGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPPHSLG*ERRLGV Trigger: TACACCCAGCCTTCTCTCCCATCCCAAGCTGTGTGG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTGTCTTGTAGGACCCTaGGGATGGGGCTCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPCLVGP*GWGSLA Trigger: AGCAAGAGAGCCCCATCCCCAGGGTCCTACAAGACA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGATTGCCAGGAGACATaGCATGAGGTCGGGCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPDCQET*HEVGRI Trigger: AATACGCCCGACCTCATGTCATGTCTCCTGGCAATC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGAATAATCTCGATGTaGGGGGCTCCATCGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGIISM*GAPSEH Trigger: ATGCTCCGATGGAGCCCCCCACATCGAGATTATTCC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCAAGGGCACATAGAATaGGTGGTTGCGATTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPQGHIE*VVAIAR Trigger: CCTGGCAATCGCAACCACCCATTCTATGTGCCCTTG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGATGCTGCCTTTCAGCTaGCAACCGCTCAGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLMLPFS*QPLSIR Trigger: TCTTATGCTGAGCGGTTGGCAGCTGAAAGGCAGCAT...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGTGCTTCGGTTGTCCTaGTCTATATCTCTAGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPVLRLS*SISLGS Trigger: CGACCCTAGAGATATAGACCAGGACAACCGAAGCAC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAAGACCCGGAAGAGTTaGAAGAAGAAACTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPKTRKS*KKKLGD Trigger: GTCCCCCAGTTTCTTCTTCCAACTCTTCCGGGTCTT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCATGATGGGAGTTACTaGTCTCTAGAGGGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIGGGTWSKILCTFCPHDGSY*SLEGED Trigger: ATCCTCACCCTCTAGAGAGCAGTAACTCCCATCATG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | TCGCGTTCCCGCTCGCGCTCGCGCTCTTTCTCCTCGCGCGCGCGCTaGTCGGCCTCGCGCCGCACTTTCTCCACCAGGTCCGCGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSRSRSRSFSSRAR*SASRRTFSTRSARF Trigger: GAAGCGCGCGGACCTGGTGGAGAAAGTGCGGCGCGAGGCCGAGCAGCGCGCGCGCGAGGAGAAAGAGCGCGAGCGCGAGCGGGAACGCGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | GGGGGCACTGTAGCCACAGCGCTGCCAGGCTCAAAGGGAGGCCGATaGGGCACTGGACCCAGAGATGGGCACTCCACTGGAGCACGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTVATALPGSKGGR*GTGPRDGHSTGARP Trigger: GGGCCGTGCTCCAGTGGAGTGCCCATCTCTGGGTCCAGTGCCCCATCGGCCTCCCTTTGAGCCTGGCAGCGCTGTGGCTACAGTGCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | GGCACTGGACCCAGAGATGGGCACTCCACTGGAGCACGGCCCTCCTaGGCCAGTTTCACACTGCGCTCCAGCTCGCGCTCTTTCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPRDGHSTGARPS*ASFTLRSSSRSFSR Trigger: GCGCGAGAAAGAGCGCGAGCTGGAGCGCAGTGTGAAACTGGCCCAGGAGGGCCGTGCTCCAGTGGAGTGCCCATCTCTGGGTCCAGTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | TTCCCGCTCCCGTTCTCGGGCAGCTGGGTCGCTGCTGTACAGGGCTaGGACATTGTAACCCAGAAGCCCCGGGTCCACTGCCCCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLPFSGSWVAAVQG*DIVTQKPRVHCPQG Trigger: CCCTTGGGGGCAGTGGACCCGGGGCTTCTGGGTTACAATGTCCCAGCCCTGTACAGCAGCGACCCAGCTGCCCGAGAACGGGAGCGGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | CACGTTCACGGGCTTCCCGCTCCCGTTCTCGGGCAGCTGGGTCGCTaGTGTACAGGGCTGGGACATTGTAACCCAGAAGCCCCGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVHGLPAPVLGQLGR*CTGLGHCNPEAPGP Trigger: TGGACCCGGGGCTTCTGGGTTACAATGTCCCAGCCCTGTACAGCAGCGACCCAGCTGCCCGAGAACGGGAGCGGGAAGCCCGTGAACGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | AAAGGGAGGCCGATGGGGCACTGGACCCAGAGATGGGCACTCCACTaGAGCACGGCCCTCCTGGGCCAGTTTCACACTGCGCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGRPMGHWTQRWALH*STALLGQFHTALQL Trigger: GAGCTGGAGCGCAGTGTGAAACTGGCCCAGGAGGGCCGTGCTCCAGTGGAGTGCCCATCTCTGGGTCCAGTGCCCCATCGGCCTCCCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGGGAGGCCCGGCCCCTaGATCTCAGCTCTTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPGRPGP*ISALPG Trigger: CCCGGGAAGAGCTGAGATCAAGGGGCCGGGCCTCCC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | CTGGTCTCCTCGCTCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTaGTTGCTGGCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSSLSLSEISSLRP*LLAFGAEGSSIRAF Trigger: GAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 90 bp | CCTCGCTCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTGCTTGCTaGCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRSHSLRSPRSGPAC*PLGQRAPLSGPSWL Trigger: CAGCCAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 90 bp | ACGGAGGTCACGTTCACGGGCTTCCCGCTCCCGTTCTCGGGCAGCTaGGTCGCTGCTGTACAGGGCTGGGACATTGTAACCCAGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TEVTFTGFPLPFSGS*VAAVQGWDIVTQKP Trigger: GGGCTTCTGGGTTACAATGTCCCAGCCCTGTACAGCAGCGACCCAGCTGCCCGAGAACGGGAGCGGGAAGCCCGTGAACGTGACCTCCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGGGCACGTCCACCACCTaGGGAGGGGGCGAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLGTSTT*GGGEGL Trigger: CAGCCCCTCGCCCCCTCCCAAGGTGGTGGACGTGCC...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCCTGCGCGCGCACGAGTaGAAGCCGCGGTCCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPLRAHE*KPRSKC Trigger: GCACTTGGACCGCGGCTTCAACTCGTGCGCGCGCAG...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | TCTCCTCGCTCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTGCTTaGTGGCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRSHSLRSPRSGPA*WPLGQRAPLSGPSW Trigger: CCAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 90 bp | GCGGGCGAGGGAGCTCCTGCTCGGTTTTGGTCTTTTTGGGCGCACTaGTCTCCTCGCTCTCACTCTCTGAGATCTCCTCGCTCCGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGEGAPARFWSFWAH*SPRSHSLRSPRSGP Trigger: AGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGAGCAGGAGCTCCCTCGCCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGCAGATGCCCAGGGATaGGCTGAGCCCCCATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPADAQG*AEPPCQ Trigger: CTGGCATGGGGGCTCAGCCAATCCCTGGGCATCTGC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | GGCCCTGGGACAGGCCAGAGGATGAGTCCGAGTCATTTTCCACGCTaGCCGGGCTGTAGATGCTGGGGGATGTGCTTCGGTTGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPGTGQRMSPSHFPR*PGCRCWGMCFGCPG Trigger: ACCAGGACAACCGAAGCACATCCCCCAGCATCTACAGCCCGGGCAGCGTGGAAAATGACTCGGACTCATCCTCTGGCCTGTCCCAGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGTCGCTCCGGCCCTGCTaGCTGGCCTTTGGGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLSLRPC*LAFGAE Trigger: CTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGA...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCTGGCTCCACACAGCTaGGGATGGGAGAGAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGLAPHS*GWERRL Trigger: CAGCCTTCTCTCCCATCCCAAGCTGTGTGGAGCCAG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGCCTGGATGGGTGTTGTaGTTGGCCAAGAGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGPGWVL*LAKRRP Trigger: TGGCCGCCTCTTGGCCAACAACAACACCCATCCAGG...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGGGCCTGGATGGGTGTaGTTGTTGGCCAAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPGPGWV*LLAKRR Trigger: CCGCCTCTTGGCCAACAACAACACCCATCCAGGCCC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCAGGTCCGCGCGCTTCTaGGCCAGCTTGGAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQGIGGGTWSKILCTFCPRSARF*ASLEPS Trigger: GGAGGGCTCCAAGCTGGCCAAGAAGCGCGCGGACCT...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | AGGGAGACTGCGGGCGAGGGAGCTCCTGCTCGGTTTTGGTCTTTTTaGGCGCACTGGTCTCCTCGCTCTCACTCTCTGAGATCTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RETAGEGAPARFWSF*AHWSPRSHSLRSPR Trigger: GCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGAGCAGGAGCTCCCTCGCCCGCAGTCTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 90 bp | TGCTGGGTGGGCTGTAGATTGACCCCCAGTAGGAGGGAAAGGGCCTaGATGGGTGTTGTTGTTGGCCAAGAGGCGGCCATAGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CWVGCRLTPSRRERA*MGVVVGQEAAIGRR Trigger: CCTCCTCCCTATGGCCGCCTCTTGGCCAACAACAACACCCATCCAGGCCCTTTCCCTCCTACTGGGGGTCAATCTACAGCCCACCCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGTCGGTGAACCTGGTTaGAAGGTCCCTGGGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPVGEPG*KVPGPA Trigger: AGCAGGCCCAGGGACCTTCAAACCAGGTTCACCGAC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTCCGCCGGCTCCTGTTaGATCTGCGTGGCGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQGIGGGTWSKILCTFCPSAGSC*ICVAVR Trigger: CCTGACCGCCACGCAGATCAAACAGGAGCCGGCGGA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCACCCGATGAGCCGCTGACATaGGAGCAGAAAGGGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GDRRRDLVQDTVHFLPPPDEPLT*EQKGRP Trigger: CGGCCTCCCTTTCTGCTCCAATGTCAGCGGCTCATC...GGGTGGGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | GCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTGGCTGTCTaGCTGGACTTCTCAGCTTTGCCATCACTGCTGGATGTGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: AFGAEGSSIRAFLAV*LDFSALPSLLDVLT Trigger: GGTCAGCACATCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS GCA 90 bp | GCTGTACAGGGCTGGGACATTGTAACCCAGAAGCCCCGGGTCCACTaGCCCCAAGGGCACATAGAATGGGTGGTTGCGATTGCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVQGWDIVTQKPRVH*PQGHIEWVVAIARR Trigger: TCTCCTGGCAATCGCAACCACCCATTCTATGTGCCCTTGGGGGCAGTGGACCCGGGGCTTCTGGGTTACAATGTCCCAGCCCTGTACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | GCTTGCTGGCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTaGCTGTCTGCCTGGACTTCTCAGCTTTGCCATCACTGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ACWPLGQRAPLSGPS*LSAWTSQLCHHCWM Trigger: CATCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 90 bp | GTAACCCAGAAGCCCCGGGTCCACTGCCCCCAAGGGCACATAGAATaGGTGGTTGCGATTGCCAGGAGACATGACATGAGGTCGGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTQKPRVHCPQGHIE*VVAIARRHDMRSGV Trigger: TACGCCCGACCTCATGTCATGTCTCCTGGCAATCGCAACCACCCATTCTATGTGCCCTTGGGGGCAGTGGACCCGGGGCTTCTGGGTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCCCTGCTTGCTGGCCTTaGGGGCAGAGGGCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KQGIGGGTWSKILCTFCPPACWP*GQRAPL Trigger: TAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGG...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AATGTGGGACGGGTAAGGGCACATATCGCCGAGGGAGGGGGTGCACACACAGGGAATATGGATATCGCATaGGAGGCCCAGGGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVGRVRAHIAEGGGAHTGNMDIA*EAQGQR Trigger: CCTCTGCCCCTGGGCCTCCAATGCGATATCCATATT...CCCTGTGTGTGCACCCCCTCCCTCGGCGATATGTGCCCTTACCCGTCCCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGCGGGCTAGTGGATCATaGCCCAGGGCTGCCACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLRASGS*PRAATL Trigger: AAGGGTGGCAGCCCTGGGCAATGATCCACTAGCCCG...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 90 bp | ATCATTGCCCAGGGCTGCCACCCTTTCTGCATGCTGCCTTTCAGCTaGCAACCGCTCAGCATAAGACATGTCAGGACGCAAGGCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IIAQGCHPFCMLPFS*QPLSIRHVRTQGWP Trigger: GGGCCAGCCTTGCGTCCTGACATGTCTTATGCTGAGCGGTTGGCAGCTGAAAGGCAGCATGCAGAAAGGGTGGCAGCCCTGGGCAATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | ATATCCAGTAGGCGGCACAGAAGGATGAGGTTCAAAGCCAGACTCTaGCTGTCGGGGAGTGCTGTCTGGTGGTGGAGGGGAAGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISSRRHRRMRFKARL*LSGSAVWWWRGRRE Trigger: TTCCCTCCTTCCCCTCCACCACCAGACAGCACTCCCCGACAGCCAGAGTCTGGCTTTGAACCTCATCCTTCTGTGCCGCCTACTGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGTCTATCCGGGCCTTCTaGGCTGTCTGCCTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLSIRAF*AVCLDF Trigger: GAAGTCCAGGCAGACAGCCAAGAAGGCCCGGATAGA...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS TCA 90 bp | GGAGGAGGAGGAACTAGAAGAGGCTGCGGCAGAGCTACTGGAGGATaGATATGGATATCGCATTGGAGGCCCAGGGGCAGAGGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGGTRRGCGRATGG*IWISHWRPRGRGRS Trigger: GCTTCTTCCTCTGCCCCTGGGCCTCCAATGCGATATCCATATTCATCCTCCAGTAGCTCTGCCGCAGCCTCTTCTAGTTCCTCCTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTCGGTTTTGGTCTTTTaGGGCGCACTGGTCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KQGIGGGTWSKILCTFCPSVLVF*GALVSS Trigger: CGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGGTTGGGGTGGTCCTCCAAGGTCTGGATGAAGGAGCAGTGGGTGCTGACCATTGGGACCTGCTaGGTTATAGGACACCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VKRLGWSSKVWMKEQWVLTIGTC*VIGHLA Trigger: GGCCAGGTGTCCTATAACCAAGCAGGTCCCAATGGT...CAGCACCCACTGCTCCTTCATCCAGACCTTGGAGGACCACCCCAACCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | GAGAGGAAGACCCGGAAGAGTTGGAAGAAGAAACTGGGGGACCATTaGGACCTGCTTGGTTATAGGACACCTGGCCATGAGGTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERKTRKSWKKKLGDH*DLLGYRTPGHEVEA Trigger: TGCCTCCACCTCATGGCCAGGTGTCCTATAACCAAGCAGGTCCCAATGGTCCCCCAGTTTCTTCTTCCAACTCTTCCGGGTCTTCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCGAAGACCCGGAAGAGTaGGAAGAAGAAACTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KQGIGGGTWSKILCTFCPEDPEE*EEETGG Trigger: TCCCCCAGTTTCTTCTTCCAACTCTTCCGGGTCTTC...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 90 bp | ATAGGAGGCTTGAGAGGAAGACCCGGAAGAGTTGGAAGAAGAAACTaGGGGACCATTGGGACCTGCTTGGTTATAGGACACCTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: IGGLRGRPGRVGRRN*GTIGTCLVIGHLAM Trigger: CATGGCCAGGTGTCCTATAACCAAGCAGGTCCCAATGGTCCCCCAGTTTCTTCTTCCAACTCTTCCGGGTCTTCCTCTCAAGCCTCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGATAGGAGGAGGGACCTGGTCCAAGATACTGTGCACTTTCTGCCCCTCCGTCCACTCCTCATaGACATCGAGTCTTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQGIGGGTWSKILCTFCPSVHSS*TSSLYS Trigger: AGAATAAAGACTCGATGTCAATGAGGAGTGGACGGA...GGGGCAGAAAGTGCACAGTATCTTGGACCAGGTCCCTCCTCCTATCCCCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 72 bp | CGCTCGCGCTCGCGCTCTTTCTCCTCGCGCGCGCGCTaGTCGGCCTCGCGCCGCACTTTCTCCACCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSRSRSFSSRAR*SASRRTFSTRS Trigger: GGACCTGGTGGAGAAAGTGCGGCGCGAGGCCGAGCAGCGCGCGCGCGAGGAGAAAGAGCGCGAGCGCGAGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 90 bp | GGCACCGGACTCTCGGGAGGTTCATACTCTTCCGCCGGCTCCTGTTaGATCTGCGTGGCGGTCAGGGGCGGCCCTGTAGTCGGGGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTGLSGGSYSSAGSC*ICVAVRGGPVVGAA Trigger: TGCGGCCCCGACTACAGGGCCGCCCCTGACCGCCACGCAGATCAAACAGGAGCCGGCGGAAGAGTATGAACCTCCCGAGAGTCCGGTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS TCA 72 bp | CCCAGCTGGGTAGGGGATCCGGGTAAGGTGAGACCCTaGGGCCAGGGGGTCAATGAGAGGGTGCACCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSWVGDPGKVRP*GQGVNERVHRG Trigger: GCCTCGGTGCACCCTCTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCCCTACCCAGCTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | CCGATGGGGCACTGGACCCAGAGATGGGCACTCCACTaGAGCACGGCCCTCCTGGGCCAGTTTCACACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PMGHWTQRWALH*STALLGQFHTA Trigger: CGCAGTGTGAAACTGGCCCAGGAGGGCCGTGCTCCAGTGGAGTGCCCATCTCTGGGTCCAGTGCCCCATCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 72 bp | GGGCTTCCCGCTCCCGTTCTCGGGCAGCTGGGTCGCTaGTGTACAGGGCTGGGACATTGTAACCCAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLPAPVLGQLGR*CTGLGHCNPEA Trigger: GGCTTCTGGGTTACAATGTCCCAGCCCTGTACAGCAGCGACCCAGCTGCCCGAGAACGGGAGCGGGAAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | CACTCTCTGAGATCTCCTCGCTCCGGCCCTGCTTGCTaGCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HSLRSPRSGPAC*PLGQRAPLSGP Trigger: AGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 72 bp | GTAGCCACAGCGCTGCCAGGCTCAAAGGGAGGCCGATaGGGCACTGGACCCAGAGATGGGCACTCCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VATALPGSKGGR*GTGPRDGHSTG Trigger: TCCAGTGGAGTGCCCATCTCTGGGTCCAGTGCCCCATCGGCCTCCCTTTGAGCCTGGCAGCGCTGTGGCTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 72 bp | CTGAGATCTCCTCGCTCCGGCCCTGCTTGCTGGCCTTaGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSPRSGPACWP*GQRAPLSGPSW Trigger: CCAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS TCA 72 bp | GAGAGGTGCCTCGATAGCCGGGTGGGGTCCCTGTTCTaGAGGAGGGTGGTGACCCCGGTTTGTATCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ERCLDSRVGSLF*RRVVTPVCIQA Trigger: CGCCTGGATACAAACCGGGGTCACCACCCTCCTTCAGAACAGGGACCCCACCCGGCTATCGAGGCACCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 72 bp | TCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTGCTTaGTGGCCTTTGGGGCAGAGGGCTCCTCTATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SHSLRSPRSGPA*WPLGQRAPLSG Trigger: CCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 72 bp | GTGCAGAAGGTAAGCTCCCACCACCCACTGGAGCACTaGGTGGCTTTGCTGGAGGAGCACCACTGGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VQKVSSHHPLEH*VALLEEHHWPQ Trigger: CTGGGGCCAGTGGTGCTCCTCCAGCAAAGCCACCCAGTGCTCCAGTGGGTGGTGGGAGCTTACCTTCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | ACGTTCACGGGCTTCCCGCTCCCGTTCTCGGGCAGCTaGGTCGCTGCTGTACAGGGCTGGGACATTGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: TFTGFPLPFSGS*VAAVQGWDIVT Trigger: GGTTACAATGTCCCAGCCCTGTACAGCAGCGACCCAGCTGCCCGAGAACGGGAGCGGGAAGCCCGTGAACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 72 bp | CTCTCGGGAGGTTCATACTCTTCCGCCGGCTCCTGTTaGATCTGCGTGGCGGTCAGGGGCGGCCCTGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSGGSYSSAGSC*ICVAVRGGPVV Trigger: GACTACAGGGCCGCCCCTGACCGCCACGCAGATCAAACAGGAGCCGGCGGAAGAGTATGAACCTCCCGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 90 bp | TCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTGCTTGCTGGCCTTaGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTGGCTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHSLRSPRSGPACWP*GQRAPLSGPSWLSA Trigger: GGCAGACAGCCAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CAA 90 bp | GTCTCCTCGCTCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTGCTaGCTGGCCTTTGGGGCAGAGGGCTCCTCTATCCGGGCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSLSLSEISSLRPC*LAFGAEGSSIRAFL Trigger: CAAGAAGGCCCGGATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CAA 90 bp | TCCTCTATCCGGGCCTTCTTGGCTGTCTGCCTGGACTTCTCAGCTTaGCCATCACTGCTGGATGTGCTGACCCCTCCAGGGGAGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSIRAFLAVCLDFSA*PSLLDVLTPPGEAR Trigger: CCGGGCCTCCCCTGGAGGGGTCAGCACATCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGGATAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS GCA 72 bp | TCGCTCTCACTCTCTGAGATCTCCTCGCTCCGGCCCTaGTTGCTGGCCTTTGGGGCAGAGGGCTCCTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLSEISSLRP*LLAFGAEGSSI Trigger: GATAGAGGAGCCCTCTGCCCCAAAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS GCA 72 bp | TCGCTGCGCGCGCACGAGTTGAAGCCGCGGTCCAAGTaGTTATTGAACCTGGCTGACTGGCTGGCATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRAHELKPRSK*LLNLADWLAWL Trigger: CAGCCATGCCAGCCAGTCAGCCAGGTTCAATAAGCACTTGGACCGCGGCTTCAACTCGTGCGCGCGCAGCGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 72 bp | CAGGGGGTCAATGAGAGGGTGCACCGAGGCAGAGGCTaGGTGGATAGCATCCTGCTGGTGCAGGTGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QGVNERVHRGRG*VDSILLVQVKV Trigger: CACCTTCACCTGCACCAGCAGGATGCTATCCACGCAGCCTCTGCCTCGGTGCACCCTCTCATTGACCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | AGGGAGACTGCGGGCGAGGGAGCTCCTGCTCGGTTTTaGTCTTTTTGGGCGCACTGGTCTCCTCGCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RETAGEGAPARF*SFWAHWSPRSH Trigger: GTGAGAGCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGAGCAGGAGCTCCCTCGCCCGCAGTCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CAA 90 bp | CCATGTAGGGGTTCCAGCTCACTAGGTTTCACCTCAAAGCCAGGCTaGAGCCGGTCACGGAGGTCACGTTCACGGGCTTCCCGCTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PCRGSSSLGFTSKPG*SRSRRSRSRASRSR Trigger: ACGGGAGCGGGAAGCCCGTGAACGTGACCTCCGTGACCGGCTCAAGCCTGGCTTTGAGGTGAAACCTAGTGAGCTGGAACCCCTACATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS TCA 72 bp | CTTTTTGGGCGCACTGGTCTCCTCGCTCTCACTCTCTaGGATCTCCTCGCTCCGGCCCTGCTTGCTGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFGRTGLLALTL*DLLAPALLAGL Trigger: AAGGCCAGCAAGCAGGGCCGGAGCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGACCAGTGCGCCCAAAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS GCA 72 bp | CTGTGGCTGCTGCTGGTGATGGTGATGTGTAGGGGCTaGTGGGTGGGCTGTAGATTGACCCCCAGTAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWLLLVMVMCRG*WVGCRLTPSRR Trigger: CCTCCTACTGGGGGTCAATCTACAGCCCACCCAGCAGCCCCTACACATCACCATCACCAGCAGCAGCCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | GCGGGCGAGGGAGCTCCTGCTCGGTTTTGGTCTTTTTaGGCGCACTGGTCTCCTCGCTCTCACTCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGEGAPARFWSF*AHWSPRSHSLR Trigger: TCTCAGAGAGTGAGAGCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGAGCAGGAGCTCCCTCGCCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 72 bp | AGGCGGCACAGAAGGATGAGGTTCAAAGCCAGACTCTaGCTGTCGGGGAGTGCTGTCTGGTGGTGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRHRRMRFKARL*LSGSAVWWWRG Trigger: TCCCCTCCACCACCAGACAGCACTCCCCGACAGCCAGAGTCTGGCTTTGAACCTCATCCTTCTGTGCCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 72 bp | TGCGGGCGAGGGAGCTCCTGCTCGGTTTTGGTCTTTTaGGGCGCACTGGTCTCCTCGCTCTCACTCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGRGSSCSVLVF*GALVSSLSLSE Trigger: CTCAGAGAGTGAGAGCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGAGCAGGAGCTCCCTCGCCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS GCA 72 bp | ACAGGCCAGAGGATGAGTCCGAGTCATTTTCCACGCTaGCCGGGCTGTAGATGCTGGGGGATGTGCTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGQRMSPSHFPR*PGCRCWGMCFG Trigger: ACCGAAGCACATCCCCCAGCATCTACAGCCCGGGCAGCGTGGAAAATGACTCGGACTCATCCTCTGGCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS GCA 72 bp | GGCTGGGACATTGTAACCCAGAAGCCCCGGGTCCACTaGCCCCAAGGGCACATAGAATGGGTGGTTGCGATT | + |
|
Preference number: 6 (lower is better) Translates to: GWDIVTQKPRVH*PQGHIEWVVAI Trigger: AATCGCAACCACCCATTCTATGTGCCCTTGGGGGCAGTGGACCCGGGGCTTCTGGGTTACAATGTCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | AAGCCCCGGGTCCACTGCCCCCAAGGGCACATAGAATaGGTGGTTGCGATTGCCAGGAGACATGACATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KPRVHCPQGHIE*VVAIARRHDMR Trigger: CCTCATGTCATGTCTCCTGGCAATCGCAACCACCCATTCTATGTGCCCTTGGGGGCAGTGGACCCGGGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 72 bp | GTAAGCTCCCACCACCCACTGGAGCACTGGGTGGCTTaGCTGGAGGAGCACCACTGGCCCCAGAACTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: VSSHHPLEHWVA*LEEHHWPQNLI Trigger: TATCAAGTTCTGGGGCCAGTGGTGCTCCTCCAGCAAAGCCACCCAGTGCTCCAGTGGGTGGTGGGAGCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 72 bp | ATGGTGATGTGTAGGGGCTGCTGGGTGGGCTGTAGATaGACCCCCAGTAGGAGGGAAAGGGCCTGGATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MVMCRGCWVGCR*TPSRRERAWMG Trigger: ACCCATCCAGGCCCTTTCCCTCCTACTGGGGGTCAATCTACAGCCCACCCAGCAGCCCCTACACATCACCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 90 bp | CTGCTGGTGATGGTGATGTGTAGGGGCTGCTGGGTGGGCTGTAGATaGACCCCCAGTAGGAGGGAAAGGGCCTGGATGGGTGTTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVMVMCRGCWVGCR*TPSRRERAWMGVVV Trigger: AACAACAACACCCATCCAGGCCCTTTCCCTCCTACTGGGGGTCAATCTACAGCCCACCCAGCAGCCCCTACACATCACCATCACCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 90 bp | CCCGGAAGAGTTGGAAGAAGAAACTGGGGGACCATTGGGACCTGCTaGGTTATAGGACACCTGGCCATGAGGTGGAGGCAGGTGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRVGRRNWGTIGTC*VIGHLAMRWRQVCW Trigger: CCAGCACACCTGCCTCCACCTCATGGCCAGGTGTCCTATAACCAAGCAGGTCCCAATGGTCCCCCAGTTTCTTCTTCCAACTCTTCCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | AGGGCTCCTCTATCCGGGCCTTCTTGGCTGTCTGCCTaGACTTCTCAGCTTTGCCATCACTGCTGGATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RAPLSGPSWLSA*TSQLCHHCWMC Trigger: GCACATCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGGATAGAGGAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 72 bp | GGAGCTCCTGCTCGGTTTTGGTCTTTTTGGGCGCACTaGTCTCCTCGCTCTCACTCTCTGAGATCTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GAPARFWSFWAH*SPRSHSLRSPR Trigger: GCGAGGAGATCTCAGAGAGTGAGAGCGAGGAGACCAGTGCGCCCAAAAAGACCAAAACCGAGCAGGAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088357.12 ENSMUST00000146872.3 |
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| CDS CCA 72 bp | GGCTGTAGATTGACCCCCAGTAGGAGGGAAAGGGCCTaGATGGGTGTTGTTGTTGGCCAAGAGGCGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: GCRLTPSRRERA*MGVVVGQEAAI Trigger: TATGGCCGCCTCTTGGCCAACAACAACACCCATCCAGGCCCTTTCCCTCCTACTGGGGGTCAATCTACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 90 bp | GTGCAGAAGGTAAGCTCCCACCACCCACTGGAGCACTGGGTGGCTTaGCTGGAGGAGCACCACTGGCCCCAGAACTTGATATTGGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: VQKVSSHHPLEHWVA*LEEHHWPQNLILEL Trigger: CAATTCCAATATCAAGTTCTGGGGCCAGTGGTGCTCCTCCAGCAAAGCCACCCAGTGCTCCAGTGGGTGGTGGGAGCTTACCTTCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS GCA 72 bp | CAGGGCTGCCACCCTTTCTGCATGCTGCCTTTCAGCTaGCAACCGCTCAGCATAAGACATGTCAGGACGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QGCHPFCMLPFS*QPLSIRHVRTQ Trigger: TTGCGTCCTGACATGTCTTATGCTGAGCGGTTGGCAGCTGAAAGGCAGCATGCAGAAAGGGTGGCAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS TCA 72 bp | GGAACTAGAAGAGGCTGCGGCAGAGCTACTGGAGGATaGATATGGATATCGCATTGGAGGCCCAGGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTRRGCGRATGG*IWISHWRPRGR Trigger: TCTGCCCCTGGGCCTCCAATGCGATATCCATATTCATCCTCCAGTAGCTCTGCCGCAGCCTCTTCTAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CAA 72 bp | GTTGGAAGAAGAAACTGGGGGACCATTGGGACCTGCTaGGTTATAGGACACCTGGCCATGAGGTGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGRRNWGTIGTC*VIGHLAMRWRQ Trigger: CTGCCTCCACCTCATGGCCAGGTGTCCTATAACCAAGCAGGTCCCAATGGTCCCCCAGTTTCTTCTTCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | CTTGGGTGGCTGATTAGAGACAGACATACTAGTTGGTaGGGGGAAGGAATGAGGATAACTGGGCAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGWLIRDRHTSW*GEGMRITGQGL Trigger: CAGGCCCTGCCCAGTTATCCTCATTCCTTCCCCCCACCAACTAGTATGTCTGTCTCTAATCAGCCACCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | AGCTTGGGATGGGAGAGAAGGCTGGGTGTACTTGGGTaGCTGATTAGAGACAGACATACTAGTTGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGWERRLGVLG*LIRDRHTSWWG Trigger: CCCCCACCAACTAGTATGTCTGTCTCTAATCAGCCACCCAAGTACACCCAGCCTTCTCTCCCATCCCAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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| CDS CCA 72 bp | ATGAATAGGAGGCTTGAGAGGAAGACCCGGAAGAGTTaGAAGAAGAAACTGGGGGACCATTGGGACCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MNRRLERKTRKS*KKKLGDHWDLL Trigger: AAGCAGGTCCCAATGGTCCCCCAGTTTCTTCTTCCAACTCTTCCGGGTCTTCCTCTCAAGCCTCCTATTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088357.12 |
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