Pregenerated sensors for ATMIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047388Ensembl transcript IDs: ENSMUST00000109099.4
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGAGCAGAGGAGAGCTCGTCCACGAAGCGGGATGAGCCTGAGATaGACAGAACTGAGGGTGTCCACAGTGCGCAGGCATCTCCACAGC | + |
|
Preference number: 1 (lower is better) Translates to: REQRRARPRSGMSLR*TELRVSTVRRHLHS Trigger: GCTGTGGAGATGCCTGCGCACTGTGGACACCCTCAGTTCTGTTCATCTCAGGCTCATCCCGCTTCGTGGACGAGCTCTCCTCTGCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 90 bp | CTTGCTGTTCTCACACTGGCCAGTAACCTCACATTGGGAGAAGGATaGCACACGAAGCTGGCGGCAGTCACAGCTCAGCAGGGAAGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: LAVLTLASNLTLGEG*HTKLAAVTAQQGRD Trigger: GTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGTGTGCCATCCTTCTCCCAATGTGAGGTTACTGGCCAGTGTGAGAACAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 90 bp | CACTGGCCAGTAACCTCACATTGGGAGAAGGATGGCACACGAAGCTaGCGGCAGTCACAGCTCAGCAGGGAAGGGACAGAAGAGACTCAA | + |
|
Preference number: 1 (lower is better) Translates to: HWPVTSHWEKDGTRS*RQSQLSREGTEETQ Trigger: TTGAGTCTCTTCTGTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGTGTGCCATCCTTCTCCCAATGTGAGGTTACTGGCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR GCA 90 bp | CTAGAAGCTCTGGGGTCAACCAGGAACTACCCTCTAGCTACTGTGTaGTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGATT | + |
|
Preference number: 1 (lower is better) Translates to: LEALGSTRNYPLATV*SQLAAVWHMAIPQI Trigger: AATCTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAGAGGGTAGTTCCTGGTTGACCCCAGAGCTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR TCA 90 bp | CTGCCGGGTGTGTTATTAGCCCATTCCCGAGTCCTCTGCATCGGGTaGATGGGACAGGACAGCAGCAATACCAACTTATTTAATGAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: LPGVLLAHSRVLCIG*MGQDSSNTNLFNES Trigger: TGACTCATTAAATAAGTTGGTATTGCTGCTGTCCTGTCCCATTCACCCGATGCAGAGGACTCGGGAATGGGCTAATAACACACCCGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR GCA 90 bp | AGATGGGTCTATTCTACAGTTGCTAGTCTCAGGGTACACATACTATaGTTGCCAGACCTAAGAGCTTCTTTCAGGGAGGAGATGGGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: RWVYSTVASLRVHIL*LPDLRASFREEMGV Trigger: CACCCCCATCTCCTCCCTGAAAGAAGCTCTTAGGTCTGGCAAGCATAGTATGTGTACCCTGAGACTAGCAACTGTAGAATAGACCCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR TCA 90 bp | CTAGCTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGCATTGTCTGAGCATTTaGGGTGCCCTTTACGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LATVCSQLAAVWHMAIPQHCLSI*GALYVE Trigger: CTCCACGTAAAGGGCACCTCAAATGCTCAGACAATG...CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 90 bp | CTGGAAAGGTCCCCAGGCTGGGCTGATTCTGAATTTGCCTCAGAGTaGGGCACCAGCTATGAATCCATGATCTACTTAGCACAGAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LERSPGWADSEFASE*GTSYESMIYLAQSP Trigger: GGGGCTCTGTGCTAAGTAGATCATGGATTCATAGCTGGTGCCCAACTCTGAGGCAAATTCAGAATCAGCCCAGCCTGGGGACCTTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CCA 90 bp | CACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGCAGCTGGCTGCCGTCTaGCACATGGCAATCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HLYLQRATSRHALLLQPEQLAAV*HMAIPQ Trigger: CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTG...CTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR GCA 90 bp | CTAGCTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGCCCTTTACGTGGAGATaGCATTTAAGTGTGCTATAC | + |
|
Preference number: 2 (lower is better) Translates to: LATVCSQLAAVWHMAIPQPFTWR*HLSVLY Trigger: GTATAGCACACTTAAATGGCATCTCCACGTAAAGGG...CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACACGAGTCAGAGGGACATaGCAAGGCAAGGTGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EGLNRCLSVKAVDESKTTRVRGT*QGKVVA Trigger: TGCCACCACCTTGCCTTGTCATGTCCCTCTGACTCG...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR GCA 90 bp | CATCTGGGTAGCATTAGGATGGGGACAAGTCACAGGAGAGACCAAGGAATAATTCCTCTAGCTACTGTGTaGTCACAGCTGGCTGCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: HLGSIRMGTSHRRDQGIIPLATV*SQLAAV Trigger: GACGGCAGCCAGCTGTGAGCACACAGTAGCTAGAGG...AATTATTCCTTGGTCTCTCCTGTGACTTGTCCCCATCCTAATGCTACCCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 90 bp | TGGGTCTATTCTACAGTTGCTAGTCTCAGGGTACACATACTATGCTaGCCAGACCTAAGAGCTTCTTTCAGGGAGGAGATGGGGGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: WVYSTVASLRVHILC*PDLRASFREEMGVG Trigger: ACCCACCCCCATCTCCTCCCTGAAAGAAGCTCTTAGGTCTGGCAAGCATAGTATGTGTACCCTGAGACTAGCAACTGTAGAATAGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR TCA 90 bp | TATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGGCTGCAATCCCACAGATTTaGTCAACACTCTGGAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YIYKEPRADMHFSFSRRAAIPQI*STLWRE Trigger: CTCCCTCCAGAGTGTTGATCAAATCTGTGGGATTGC...AGCCCTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCCCAGTAACCTCACATTaGGAGAAGGATGGCACACGA | + |
|
Preference number: 2 (lower is better) Translates to: KDVCGGGDVMYITTCPHPPVTSH*EKDGTR Trigger: TCGTGTGCCATCCTTCTCCCAATGTGAGGTTACTGG...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CCA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCACCATCCAGGCTAGACTaGAAAGGTCCCCAGGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IAALIFTKSHEQTCTSPSPSRLD*KGPQAG Trigger: CCCAGCCTGGGGACCTTTCCAGTCTAGCCTGGATGG...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR TCA 90 bp | TATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGGCTGCTTTGTGTCTGTTCTaGAACTCACATTCACAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: YIYKEPRADMHFSFSRRAALCLF*NSHSQA Trigger: CGCCTGTGAATGTGAGTTTCAGAACAGACACAAAGC...AGCCCTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGGAAGGGACAGAAGAGACTCAAAACTGTCATAAAAGCTAAAGACAGGTGTAGCAGCCACAAAGCTTaGCCCCTACCACCTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: AGKGQKRLKTVIKAKDRCSSHKA*PLPPAK Trigger: CTTAGCAGGTGGTAGGGGGCAAGCTTTGTGGCTGCT...ACACCTGTCTTTAGCTTTTATGACAGTTTTGAGTCTCTTCTGTCCCTTCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACATGGGTAGCATTAGGATaGGGACAAGTCACAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EGLNRCLSVKAVDESKTTWVALG*GQVTGE Trigger: CTCTCCTGTGACTTGTCCCCATCCTAATGCTACCCA...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 90 bp | TCCCTACCTCCCAACCCACCAGATAGGGTGACACTCAAGGTTAAGTaGATTGCTAATGGTTTAAGCAACTCTCTACCCACACAACAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLPPNPPDRVTLKVK*IANGLSNSLPTQQS Trigger: GCTTTGTTGTGTGGGTAGAGAGTTGCTTAAACCATTAGCAATCAACTTAACCTTGAGTGTCACCCTATCTGGTGGGTTGGGAGGTAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 90 bp | AGCAGACATGCACTTCTCCTTCAGCCGGAGGGCTTAAATAGATGCTaGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACAGAAAATCTA | + |
|
Preference number: 2 (lower is better) Translates to: SRHALLLQPEGLNRC*SVKAVDESKTTENL Trigger: TAGATTTTCTGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTCCGGCTGAAGGAGAAGTGCATGTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR TCA 90 bp | CATCTGGGTAGCATTAGGATGGGGACAAGTCACAGGAGAGACCAAGGAATAATTCAGAAACAGTATCCCTaGGTTCTAGTAAATTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: HLGSIRMGTSHRRDQGIIQKQYP*VLVNSL Trigger: CAGTGAATTTACTAGAACTCAGGGATACTGTTTCTG...AATTATTCCTTGGTCTCTCCTGTGACTTGTCCCCATCCTAATGCTACCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR GCA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAAGACATTGTGGGCCCTaGTTCTCCTATCAAGATAAC | + |
|
Preference number: 2 (lower is better) Translates to: IAALIFTKSHEQTCTSPSRHCGP*FSYQDN Trigger: GTTATCTTGATAGGAGAAGCAGGGCCCACAATGTCT...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCAGAGGTGCCCTTTACGTaGAGATGCCATTTAAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RRDQGIINDRKVGVFSASEVPFT*RCHLSV Trigger: CACACTTAAATGGCATCTCCACGTAAAGGGCACCTC...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCCATTCTTTATCTTGTAACTATTAAGACACATCGCCACAGACACAAAAACTCAGCGTACTTTAGATaGGTCTATTCTACAGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CSILYLVTIKTHRHRHKNSAYFR*VYSTVA Trigger: AGCAACTGTAGAATAGACCCATCTAAAGTACGCTGA...GTTTTTGTGTCTGTGGCGATGTGTCTTAATAGTTACAAGATAAAGAATGGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR TCA 72 bp | AGGAGAGCTCGTCCACGAAGCGGGATGAGCCTGAGATaGACAGAACTGAGGGTGTCCACAGTGCGCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RRARPRSGMSLR*TELRVSTVRRH Trigger: ATGCCTGCGCACTGTGGACACCCTCAGTTCTGTTCATCTCAGGCTCATCCCGCTTCGTGGACGAGCTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR GCA 72 bp | CTGGGGTCAACCAGGAACTACCCTCTAGCTACTGTGTaGTCACAGCTGGCTGCCGTCTGGCACATGGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LGSTRNYPLATV*SQLAAVWHMAI Trigger: GATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAGAGGGTAGTTCCTGGTTGACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | CTCACACTGGCCAGTAACCTCACATTGGGAGAAGGATaGCACACGAAGCTGGCGGCAGTCACAGCTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTLASNLTLGEG*HTKLAAVTAQQ Trigger: CTGCTGAGCTGTGACTGCCGCCAGCTTCGTGTGCCATCCTTCTCCCAATGTGAGGTTACTGGCCAGTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | CCTGCTTCTCCTATCAAGATAACAAGTGCAGCATACTaGCGGGGGCTGGGCAGGAAAGCCTTTCCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PASPIKITSAAY*RGLGRKAFPPP Trigger: GGGTGGGGGAAAGGCTTTCCTGCCCAGCCCCCGCCAGTATGCTGCACTTGTTATCTTGATAGGAGAAGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR TCA 72 bp | CTGGCTGCCGTCTGGCACATGGCAATCCCACAGATTTaGTCAACACTCTGGAGGGAGCAGAGGAGAGCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LAAVWHMAIPQI*STLWREQRRAR Trigger: ACGAGCTCTCCTCTGCTCCCTCCAGAGTGTTGATCAAATCTGTGGGATTGCCATGTGCCAGACGGCAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | GTAACCTCACATTGGGAGAAGGATGGCACACGAAGCTaGCGGCAGTCACAGCTCAGCAGGGAAGGGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VTSHWEKDGTRS*RQSQLSREGTE Trigger: TTCTGTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGTGTGCCATCCTTCTCCCAATGTGAGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | TATGGGAAGCAGTCGGGCAGGCCCCATGGTCTACTGTaGAGCAGGAAGGATGTTTGTGGGGGAGGTGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: YGKQSGRPHGLL*SRKDVCGGGDV Trigger: TACATCACCTCCCCCACAAACATCCTTCCTGCTCCACAGTAGACCATGGGGCCTGCCCGACTGCTTCCCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | TGCTTGCTGTTCTCACACTGGCCAGTAACCTCACATTaGGAGAAGGATGGCACACGAAGCTGGCGGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLLFSHWPVTSH*EKDGTRSWRQS Trigger: TGACTGCCGCCAGCTTCGTGTGCCATCCTTCTCCCAATGTGAGGTTACTGGCCAGTGTGAGAACAGCAAGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | CTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATaGCAATCCCACAGATTTGATCAACACTCTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCAHSWLPSGT*QSHRFDQHSGG Trigger: CCCTCCAGAGTGTTGATCAAATCTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR GCA 72 bp | GAACTACCCTCTAGCTACTGTGTGCTCACAGCTGGCTaGCGTCTGGCACATGGCAATCCCACAGATTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: ELPSSYCVLTAG*RLAHGNPTDLI Trigger: GATCAAATCTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAGAGGGTAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | CCTGCCATTGACACCGAGTGCTTGCTGTTCTCACACTaGCCAGTAACCTCACATTGGGAGAAGGATGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PAIDTECLLFSH*PVTSHWEKDGT Trigger: TGTGCCATCCTTCTCCCAATGTGAGGTTACTGGCCAGTGTGAGAACAGCAAGCACTCGGTGTCAATGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACATCGGTGCCGCTGTCCTaGAGCCCATGTTCTAAACGC | + |
|
Preference number: 3 (lower is better) Translates to: EGLNRCLSVKAVDESKTTSVPLS*SPCSKR Trigger: GCGTTTAGAACATGGGCTCAAGGACAGCGGCACCGA...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGATAATACACTCACATTaGCACACCAATCTTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LATVCSQLAAVWHMAIPQIIHSH*HTNLVV Trigger: GACCACAAGATTGGTGTGCAAATGTGAGTGTATTAT...CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACAAAGTCCTCTGCCCCTTaGCACCCAGCCTACCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EGLNRCLSVKAVDESKTTKSSAP*HPAYPS Trigger: TGAAGGGTAGGCTGGGTGCAAAGGGGCAGAGGACTT...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR TCA 72 bp | GGCATCTCAGGAGTTAGCGGCCACACAAACATTGTCTaGGCATTTGAGGTGCCCTTTACGTGGAGATGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GISGVSGHTNIV*AFEVPFTWRCH Trigger: ATGGCATCTCCACGTAAAGGGCACCTCAAATGCTCAGACAATGTTTGTGTGGCCGCTAACTCCTGAGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR GCA 72 bp | TACCTTCCTCGTACTAAGCCTGCCATTGACACCGAGTaGTTGCTGTTCTCACACTGGCCAGTAACCTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: YLPRTKPAIDTE*LLFSHWPVTSH Trigger: ATGTGAGGTTACTGGCCAGTGTGAGAACAGCAAGCACTCGGTGTCAATGGCAGGCTTAGTACGAGGAAGGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR GCA 72 bp | GATGGGGGTGGGTGGAAGGAAAGACATTGTGGGCCCTaGTTCTCCTATCAAGATAACAAGTGCAGCATACTG | + |
|
Preference number: 3 (lower is better) Translates to: DGGGWKERHCGP*FSYQDNKCSIL Trigger: CAGTATGCTGCACTTGTTATCTTGATAGGAGAAGCAGGGCCCACAATGTCTTTCCTTCCACCCACCCCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | TTGCTTGCTATGAGGTCATTGGTAGCTGGTAGCATCTaGGTAGCATTAGGATGGGGACAAGTCACAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLAMRSLVAGSI*VALGWGQVTGE Trigger: CTCTCCTGTGACTTGTCCCCATCCTAATGCTACCCAGATGCTACCAGCTACCAATGACCTCATAGCAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CCA 72 bp | TGTGTCTGTTCTGAAACTCACATTCACAGGCGACTGTaGCCACAACCACTGTTTAGCTCCTGGGTTGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: CVCSETHIHRRL*PQPLFSSWVAF Trigger: GAATGCAACCCAGGAGCTAAACAGTGGTTGTGGCCACAGTCGCCTGTGAATGTGAGTTTCAGAACAGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR TCA 72 bp | GTGTTATTAGCCCATTCCCGAGTCCTCTGCATCGGGTaGATGGGACAGGACAGCAGCAATACCAACTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLAHSRVLCIG*MGQDSSNTNLF Trigger: AAATAAGTTGGTATTGCTGCTGTCCTGTCCCATTCACCCGATGCAGAGGACTCGGGAATGGGCTAATAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACAAATGTATATCACAACTaGCCCCCACCCCAAAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EGLNRCLSVKAVDESKTTNVYHN*PPPQSL Trigger: AAGACTTTGGGGTGGGGGCAAGTTGTGATATACATT...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR TCA 72 bp | TTGCACCCAGCCTACCCTTCACAGAAACAGTATCCCTaGGTTCTAGTAAATTCACTGAGCACAAAGAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LHPAYPSQKQYP*VLVNSLSTKSV Trigger: CACACTCTTTGTGCTCAGTGAATTTACTAGAACTCAGGGATACTGTTTCTGTGAAGGGTAGGCTGGGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCAGCGGCCACACAAACATaGTCTGAGCATTTGAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RRDQGIINDRKVGVFSASAATQT*SEHLRC Trigger: GCACCTCAAATGCTCAGACAATGTTTGTGTGGCCGC...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCAGGCAATCCCACAGATTaGATCAACACTCTGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRDQGIINDRKVGVFSASGNPTD*INTLEG Trigger: TCCCTCCAGAGTGTTGATCAAATCTGTGGGATTGCC...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | CGGGATGAGCCTGAGATGAACAGAACTGAGGGTGTCCACAGTGCGCAGGCATCTCAGAGAGCAGGCCTCTaGGTCCAGGCTGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDEPEMNRTEGVHSAQASQRAGL*VQAEDQ Trigger: CTGATCCTCAGCCTGGACTCAGAGGCCTGCTCTCTG...AGATGCCTGCGCACTGTGGACACCCTCAGTTCTGTTCATCTCAGGCTCATCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | CTAGCTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGAGCCGTTCTGGGTGCTaGAGTTTAACACGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LATVCSQLAAVWHMAIPQSRSGC*SLTRVQ Trigger: CTGCACCCGTGTTAAACTTCAGCACCCAGAACGGCT...CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | CTAGCTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGGCACTGAGTCGTTTGTaGGGTTCTGCATCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LATVCSQLAAVWHMAIPQALSRL*GSASCW Trigger: CCAGCAGGATGCAGAACCGCACAAACGACTCAGTGC...CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCGAGCCAGCTGGGAGCTaGGCGTCAGGTCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KDVCGGGDVMYITTCPHPEPAGS*ASGPGL Trigger: CAACCCCGGACCTGACGCCCAGCTCCCAGCTGGCTC...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | GCTGGCTGCCGTCTGGCACATGGCAATCCCACAGATTaGATCAACACTCTGGAGGGAGCAGAGGAGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGCRLAHGNPTD*INTLEGAEESS Trigger: CGAGCTCTCCTCTGCTCCCTCCAGAGTGTTGATCAAATCTGTGGGATTGCCATGTGCCAGACGGCAGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | ACGAAGCTGGCGGCAGTCACAGCTCAGCAGGGAAGGGACAGAAGAGACTCAAAACTAGGTGGGTCTCTGTaGTCTGCAGGGATCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKLAAVTAQQGRDRRDSKLGGSL*SAGISW Trigger: CCACGAGATCCCTGCAGAGCACAGAGACCCACCTAG...TTTTGAGTCTCTTCTGTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCTCGCTCACAGTCGGCTaGATCAGCTCCCGGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KDVCGGGDVMYITTCPHPSLTVG*ISSRAG Trigger: ACCGGCCCGGGAGCTGATCCAGCCGACTGTGAGCGA...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | CGGGATGAGCCTGAGATGAACAGAACTGAGGGTGTCCACAGTGCGCAGGCATCTAGGGTCACTCTGAGGTaGCAGACCATGAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDEPEMNRTEGVHSAQASRVTLR*QTMSPC Trigger: ACAGGGACTCATGGTCTGCCACCTCAGAGTGACCCT...AGATGCCTGCGCACTGTGGACACCCTCAGTTCTGTTCATCTCAGGCTCATCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | GTGCTTGCTGTTCTCACACTGGCCAGTAACCTCACATaGGGAGAAGGATGGCACACGAAGCTGGCGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLAVLTLASNLT*GEGWHTKLAAV Trigger: GACTGCCGCCAGCTTCGTGTGCCATCCTTCTCCCAATGTGAGGTTACTGGCCAGTGTGAGAACAGCAAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | CACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGTCCAGAGCAGGCAGGTaGCGAGCAGGGCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLYLQRATSRHALLLQPESRAGR*RAGQAP Trigger: AGGAGCCTGCCCTGCTCGGCACCTGCCTGCTCTGGA...CTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | CCACAGCTGGATACCTTCCTCGTACTAAGCCTGCCATaGACACCGAGTGCTTGCTGTTCTCACACTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLDTFLVLSLP*TPSACCSHTGQ Trigger: CTGGCCAGTGTGAGAACAGCAAGCACTCGGTGTCAATGGCAGGCTTAGTACGAGGAAGGTATCCAGCTGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | GTGTGCCTAGAGAAGGTGTGGAAGTCCTCTGCCCCTTaGCACCCAGCCTACCCTTCACAGAAACAGTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLEKVWKSSAP*HPAYPSQKQYP Trigger: GGGATACTGTTTCTGTGAAGGGTAGGCTGGGTGCAAAGGGGCAGAGGACTTCCACACCTTCTCTAGGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | CGGGATGAGCCTGAGATGAACAGAACTGAGGGTGTCCACAGTGCGCAGGCATCTTTAACCAGAGAAAACTaGGAAAACGGTCGGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDEPEMNRTEGVHSAQASLTREN*ENGRSG Trigger: CCCCGACCGACCGTTTTCTCAGTTTTCTCTGGTTAA...AGATGCCTGCGCACTGTGGACACCCTCAGTTCTGTTCATCTCAGGCTCATCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | CACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGGGATGCTGCAGGCTTaGCCTCCGGAGCATCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLYLQRATSRHALLLQPEGMLQA*PPEHPV Trigger: AACCGGATGCTCCGGAGGTCAAGCCTGCAGCATCCC...CTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | ACGAAGCTGGCGGCAGTCACAGCTCAGCAGGGAAGGGACAGAAGAGACTCAAAATGTCTGCACGTTGCTTaGGGAAATGCTGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKLAAVTAQQGRDRRDSKCLHVA*GNAGPL Trigger: CAGAGGACCAGCATTTCCTCAAGCAACGTGCAGACA...TTTTGAGTCTCTTCTGTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | ACGAAGCTGGCGGCAGTCACAGCTCAGCAGGGAAGGGACAGAAGAGACTCAAAATCCACGGAGCTGAACTaGGACTCCATCGTATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKLAAVTAQQGRDRRDSKSTELN*DSIVFQ Trigger: CTGGAATACGATGGAGTCCCAGTTCAGCTCCGTGGA...TTTTGAGTCTCTTCTGTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | CGGGATGAGCCTGAGATGAACAGAACTGAGGGTGTCCACAGTGCGCAGGCATCTCAGAGGGTATCAAGTTaGCTGAGGCATAGGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDEPEMNRTEGVHSAQASQRVSS*LRHRSD Trigger: ATCTGACCTATGCCTCAGCCAACTTGATACCCTCTG...AGATGCCTGCGCACTGTGGACACCCTCAGTTCTGTTCATCTCAGGCTCATCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | TATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGGCTGGGTTTCCACGGAGCTaGACTGGGACTCCATCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YIYKEPRADMHFSFSRRAGFPRS*TGTPSY Trigger: ATACGATGGAGTCCCAGTTCAGCTCCGTGGAAACCC...AGCCCTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCTCAATCCCAGAATTCTaGGCTGAGCCAGCTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDVCGGGDVMYITTCPHPSIPEF*AEPAGS Trigger: GCTCCCAGCTGGCTCAGCGCAGAATTCTGGGATTGA...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | CACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGACAGCGTGCAGCTCTaGGCATGTCTGGGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLYLQRATSRHALLLQPEDSVQL*ACLGFH Trigger: GTGGAAACCCAGACATGCGCAGAGCTGCACGCTGTC...CTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | CTAGCTACTGTGTGCTCACAGCTGGCTGCCGTCTGGCACATGGCAATCCCACAGGACTTTTCCATGACTTaGCCTAAGATCTTAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LATVCSQLAAVWHMAIPQDFSMT*PKILGS Trigger: TGACCCTAAGATCTTAGGCCAAGTCATGGAAAAGTC...CTGTGGGATTGCCATGTGCCAGACGGCAGCCAGCTGTGAGCACACAGTAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | TATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGGCTAGCCATAGGGCTGTGTaGAGGGATCTGAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YIYKEPRADMHFSFSRRASHRAV*RDLRGG Trigger: TCCTCCTCTCAGATCCCTCCACACAGCCCTATGGCT...AGCCCTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCACCTCTGAGTCCAGGCTaGGGATCAGGGCTCCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: IAALIFTKSHEQTCTSPSPLSPG*GSGLLP Trigger: CGGTAGGAGCCCTGATCCTCAGCCTGGACTCAGAGG...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | GCAGGGAAGGGACAGAAGAGACTCAAAACTGTCATAAAAGCTAAAGACAGGTGTAAGGCCCAGGAAGCCTaGCCCCGCTCTGAAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: AGKGQKRLKTVIKAKDRCKAQEA*PRSEAI Trigger: TATGGCTTCAGAGCGGGGTCAGGCTTCCTGGGCCTT...ACACCTGTCTTTAGCTTTTATGACAGTTTTGAGTCTCTTCTGTCCCTTCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCATGGCGCGGGGCTGCTTaGTCGCTCAGTGGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IAALIFTKSHEQTCTSPSWRGAA*SLSGSV Trigger: CACTGAACCACTGAGCGACCAAGCAGCCCCGCGCCA...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACATGCATCCTGCTGGTCTaGGTTTCCCTGGAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLNRCLSVKAVDESKTTCILLV*VSLETP Trigger: TGGGGTCTCCAGGGAAACCCAGACCAGCAGGATGCA...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | GTGGTGGCATCTCAGGAGTTAGCGGCCACACAAACATaGTCTGAGCATTTGAGGTGCCCTTTACGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVASQELAATQT*SEHLRCPLRGD Trigger: ATCTCCACGTAAAGGGCACCTCAAATGCTCAGACAATGTTTGTGTGGCCGCTAACTCCTGAGATGCCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCGGGTATCAAGTTGGCTaGGGCATAGGTCAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDVCGGGDVMYITTCPHPGYQVG*GIGQIC Trigger: ACAGATCTGACCTATGCCTCAGCCAACTTGATACCC...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCATCTGTCATGGTGTGTaGAGGAAGCAAGCCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KDVCGGGDVMYITTCPHPICHGV*RKQAVL Trigger: CAGAACGGCTTGCTTCCTGCACACACCATGACAGAT...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCATGGTCTGGGTTTCCCTaGAGACCCCACCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IAALIFTKSHEQTCTSPSWSGFP*RPHQAG Trigger: TCCAGCCTGGTGGGGTCTCCAGGGAAACCCAGACCA...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | TCCCCAGGCTGGGCTGATTCTGAATTTGCCTCAGAGTaGGGCACCAGCTATGAATCCATGATCTACTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGWADSEFASE*GTSYESMIYLA Trigger: TGCTAAGTAGATCATGGATTCATAGCTGGTGCCCAACTCTGAGGCAAATTCAGAATCAGCCCAGCCTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | GCACTTCTCCTTCAGCCGGAGGGCTTAAATAGATGCTaGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPEGLNRC*SVKAVDESKTT Trigger: TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTCCGGCTGAAGGAGAAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAAGGGACAGAAGAGACTCAAAACTGTCATAAAAGCTAAAGACAGGTGTCTGGGCACCAACGTCTaGGTGTGGACACTAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGKGQKRLKTVIKAKDRCLGTNV*VWTLTG Trigger: TCCTGTTAGTGTCCACACCCAGACGTTGGTGCCCAG...ACACCTGTCTTTAGCTTTTATGACAGTTTTGAGTCTCTTCTGTCCCTTCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | CATCTGGGTAGCATTAGGATGGGGACAAGTCACAGGAGAGACCAAGGAATAATTTTTACTATGCCATCCTaGAGTCGGTGGCTCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HLGSIRMGTSHRRDQGIIFTMPS*SRWLLT Trigger: CGTCAAGAGCCACCGACTGCAGGATGGCATAGTAAA...AATTATTCCTTGGTCTCTCCTGTGACTTGTCCCCATCCTAATGCTACCCAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCAGGTAACAGCAACTTCTaGGGACACCGGGGAGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRDQGIINDRKVGVFSASGNSNF*GHRGGV Trigger: GACGCCTCCCCGGTGTCCCCAGAAGTTGCTGTTACC...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | AAGGATGTTTGTGGGGGAGGTGATGTAATGTATATCACAACTTGCCCCCACCCCCTCGAGGACATCCTTTaGTTGGACAACAGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: KDVCGGGDVMYITTCPHPLEDIL*LDNSRI Trigger: AATTCTACTGTTGTCCAATCAAAGGATGTCCTCGAG...GGGGTGGGGGCAAGTTGTGATATACATTACATCACCTCCCCCACAAACATCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | GCAGGGAAGGGACAGAAGAGACTCAAAACTGTCATAAAAGCTAAAGACAGGTGTTCACTCTCCTCAGTCTaGGTCTGGATATTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKGQKRLKTVIKAKDRCSLSSV*VWILEA Trigger: AGCCTCCAATATCCAGACTCAGACTGAGGAGAGTGA...ACACCTGTCTTTAGCTTTTATGACAGTTTTGAGTCTCTTCTGTCCCTTCCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCAAGTGTTTCAGGATGCTaGCCAGGGGCAGGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRDQGIINDRKVGVFSASSVSGC*PGAGED Trigger: GTCCTCACCTGCCCCTGGGCAGCATCCTGAAACACT...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | TCTACAGTTGCTAGTCTCAGGGTACACATACTATGCTaGCCAGACCTAAGAGCTTCTTTCAGGGAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: STVASLRVHILC*PDLRASFREEM Trigger: CATCTCCTCCCTGAAAGAAGCTCTTAGGTCTGGCAAGCATAGTATGTGTACCCTGAGACTAGCAACTGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | CCCAACCCACCAGATAGGGTGACACTCAAGGTTAAGTaGATTGCTAATGGTTTAAGCAACTCTCTACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PNPPDRVTLKVK*IANGLSNSLPT Trigger: TGTGGGTAGAGAGTTGCTTAAACCATTAGCAATCAACTTAACCTTGAGTGTCACCCTATCTGGTGGGTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCCATTCTTTATCTTGTAACTATTAAGACACATCGCCACAGACACAAAAACTGCACAGAATATTGGTaGGCACAGCCCGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSILYLVTIKTHRHRHKNCTEYW*AQPGTA Trigger: AGCTGTCCCGGGCTGTGCGCACCAATATTCTGTGCA...GTTTTTGTGTCTGTGGCGATGTGTCTTAATAGTTACAAGATAAAGAATGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCATTGTCGGGTTTACTATaGCATCCTGCAGTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRDQGIINDRKVGVFSASLSGLL*HPAVGG Trigger: GCCACCGACTGCAGGATGGCATAGTAAACCCGACAA...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTTAAATAGATGCTTGAGCGTTAAGGCAGTGGACGAGTCCAAAACAACATGCCGTAGGAATTACTaGACTTACTGCATTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLNRCLSVKAVDESKTTCRRNY*TYCICA Trigger: AGCACAAATGCAGTAAGTGCAGTAATTCCTACGGCA...TGTTGTTTTGGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | TTTAATGAGTCATCACCAGCCCCCTTAGGTTTCATTTaGAAGGTTCAGCTTTTGGCAGCACAAACGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNESSPAPLGFI*KVQLLAAQTYA Trigger: GGCATACGTTTGTGCTGCCAAAAGCTGAACCTTCAAAATGAAACCTAAGGGGGCTGGTGATGACTCATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCATCATCCATTGCTGTCTaGGTTTCGTTGCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRDQGIINDRKVGVFSASSSIAV*VSLLVR Trigger: CCTCACCAGCAACGAAACTCAGACAGCAATGGATGA...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCACGCTCAGTGGTTCAGTaGTTTTACTGGACAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IAALIFTKSHEQTCTSPSRSVVQ*FYWTTF Trigger: AAAAGTTGTCCAGTAAAACCACTGAACCACTGAGCG...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCCATTCTTTATCTTGTAACTATTAAGACACATCGCCACAGACACAAAAACTTTGTGTTTCTGTGCTaGTCAACTGGACCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSILYLVTIKTHRHRHKNFVFLC*STGPCS Trigger: AGAGCAAGGTCCAGTTGAGCAGCACAGAAACACAAA...GTTTTTGTGTCTGTGGCGATGTGTCTTAATAGTTACAAGATAAAGAATGGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCCATTCTTTATCTTGTAACTATTAAGACACATCGCCACAGACACAAAAACTTACCCAAGTTCACTTaGACACCTGTATTCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSILYLVTIKTHRHRHKNLPKFT*TPVFIG Trigger: GCCAATGAATACAGGTGTTCAAGTGAACTTGGGTAA...GTTTTTGTGTCTGTGGCGATGTGTCTTAATAGTTACAAGATAAAGAATGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| 3UTR CAA 72 bp | AGTTCAGGTGACTTAAGATTTTTGTGGGGACAGTTCTaGCACATGAAGGACAATTACATGCTCCATTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGDLRFLWGQF*HMKDNYMLHSL Trigger: TAAAGAATGGAGCATGTAATTGTCCTTCATGTGCAAGAACTGTCCCCACAAAAATCTTAAGTCACCTGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS TCA 90 bp | GCTTTCAAAAATGTCCCCACACAAGCCAGTGTGGCCCACTGGCACTaGGTCGTTTGTGCGGTTCTGCATCCTGCTGGTCTGGGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFKNVPTQASVAHWH*VVCAVLHPAGLGFP Trigger: AGGGAAACCCAGACCAGCAGGATGCAGAACCGCACAAACGACTCAGTGCCAGTGGGCCACACTGGCTTGTGTGGGGACATTTTTGAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS CCA 90 bp | ATATCAAAATCAATCCCAGAATTCTGCGCTGAGCCAGCTGGGAGCTaGGCGTCAGGTCCGGGGTTGGTGTCGGACAAGAGACTCCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ISKSIPEFCAEPAGS*ASGPGLVSDKRLRL Trigger: TAACCGGAGTCTCTTGTCCGACACCAACCCCGGACCTGACGCCCAGCTCCCAGCTGGCTCAGCGCAGAATTCTGGGATTGATTTTGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | CATCTGGGTAGCATTAGGATGGGGACAAGTCACAGGAGAGACCAAGGAATAATTCGGTTCAGCAGCATCTaGGCGCGGGGCTGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLGSIRMGTSHRRDQGIIRFSSI*ARGCLV Trigger: GACCAAGCAGCCCCGCGCCAAGATGCTGCTGAACCG...AATTATTCCTTGGTCTCTCCTGTGACTTGTCCCCATCCTAATGCTACCCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS TCA 90 bp | GTATTCCAGGCCAGATCGGCTAGAAGGAAGTCATCCATTGCTGTCTaGGTTTCGTTGCTGGTGAGGAACAAGTTCCCCAGGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFQARSARRKSSIAV*VSLLVRNKFPRGSK Trigger: CTTCGAGCCCCTGGGGAACTTGTTCCTCACCAGCAACGAAACTCAGACAGCAATGGATGACTTCCTTCTAGCCGATCTGGCCTGGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS GCA 90 bp | AAGCTGCTACTCATGATGGTGTCAGTAGGCACACTGTATGACGCATaGACGCTTTCAAAAATGTCCCCACACAAGCCAGTGTGGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KLLLMMVSVGTLYDA*TLSKMSPHKPVWPT Trigger: AGTGGGCCACACTGGCTTGTGTGGGGACATTTTTGAAAGCGTGCATGCGTCATACAGTGTGCCTACTGACACCATCATGAGTAGCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAACGGTGCACAGAATATaGGTGCGCACAGCCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IAALIFTKSHEQTCTSPSTVHRI*VRTARD Trigger: GTCCCGGGCTGTGCGCACCAATATTCTGTGCACCGT...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGCACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCACTGCTCAACTGGACCTaGCTCTCCAGAGCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IAALIFTKSHEQTCTSPSLLNWT*LSRAGR Trigger: CCTGCCTGCTCTGGAGAGCAAGGTCCAGTTGAGCAG...TGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTGCAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | ACGAAGCTGGCGGCAGTCACAGCTCAGCAGGGAAGGGACAGAAGAGACTCAAAATTTACCCAAGTTCACTaGAACACCTGTATTCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLAAVTAQQGRDRRDSKFTQVH*NTCIHW Trigger: CCAATGAATACAGGTGTTCAAGTGAACTTGGGTAAA...TTTTGAGTCTCTTCTGTCCCTTCCCTGCTGAGCTGTGACTGCCGCCAGCTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGACCAAGGAATAATTAATGATCGAAAGGTTGGGGTATTTTCAGCTTCAGAGCCACCTTGGGCTTaGGTAACAGCAACTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRDQGIINDRKVGVFSASEPPWA*VTATSG Trigger: CCCAGAAGTTGCTGTTACCAAAGCCCAAGGTGGCTC...TGAAGCTGAAAATACCCCAACCTTTCGATCATTAATTATTCCTTGGTCTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | CACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGGGACAACTTTTGGTTTaGCAGGTAGCTTTCCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLYLQRATSRHALLLQPEGQLLV*QVAFHF Trigger: AAAATGGAAAGCTACCTGCAAAACCAAAAGTTGTCC...CTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS-3UTR CAA 90 bp | CACTTATATTTACAAAGAGCCACGAGCAGACATGCACTTCTCCTTCAGCCGGAGTTTACTGGACAACTTTaGGTTTTGCAGGTAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLYLQRATSRHALLLQPEFTGQL*VLQVAF Trigger: GAAAGCTACCTGCAAAACCAAAAGTTGTCCAGTAAA...CTCCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS GCA 72 bp | GGCTGTGTGGAGGGATCTGAGAGGAGGACGTCGGTCTaGGTCTCGATGTCCAGGGACTCCAGGACCGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GCVEGSERRTSV*VSMSRDSRTGS Trigger: TGAGCCGGTCCTGGAGTCCCTGGACATCGAGACGCAGACCGACGTCCTCCTCTCAGATCCCTCCACACAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS TCA 72 bp | CCCCGCTCTGAAGCCATAGGGCTGTGTGGAGGGATCTaGGAGGAGGACGTCGGTCTGCGTCTCGATGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRSEAIGLCGGI*EEDVGLRLDVQ Trigger: CTGGACATCGAGACGCAGACCGACGTCCTCCTCTCAGATCCCTCCACACAGCCCTATGGCTTCAGAGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS GCA 72 bp | GTGTGGCCCACTGGCACTGAGTCGTTTGTGCGGTTCTaGATCCTGCTGGTCTGGGTTTCCCTGGAGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VWPTGTESFVRF*ILLVWVSLETP Trigger: TGGGGTCTCCAGGGAAACCCAGACCAGCAGGATGCAGAACCGCACAAACGACTCAGTGCCAGTGGGCCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS CCA 72 bp | GCATCCGGTTCAGCAGCATCTTGGCGCGGGGCTGCTTaGTCGCTCAGTGGTTCAGTGGTTTTACTGGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASGSAASWRGAA*SLSGSVVLLDN Trigger: GTTGTCCAGTAAAACCACTGAACCACTGAGCGACCAAGCAGCCCCGCGCCAAGATGCTGCTGAACCGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS CCA 72 bp | TGCACGCTTTCAAAAATGTCCCCACACAAGCCAGTGTaGCCCACTGGCACTGAGTCGTTTGTGCGGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CTLSKMSPHKPV*PTGTESFVRFC Trigger: GCAGAACCGCACAAACGACTCAGTGCCAGTGGGCCACACTGGCTTGTGTGGGGACATTTTTGAAAGCGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS TCA 72 bp | GCCAGATCGGCTAGAAGGAAGTCATCCATTGCTGTCTaGGTTTCGTTGCTGGTGAGGAACAAGTTCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARSARRKSSIAV*VSLLVRNKFPR Trigger: CCTGGGGAACTTGTTCCTCACCAGCAACGAAACTCAGACAGCAATGGATGACTTCCTTCTAGCCGATCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS GCA 72 bp | CTCATGATGGTGTCAGTAGGCACACTGTATGACGCATaGACGCTTTCAAAAATGTCCCCACACAAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMMVSVGTLYDA*TLSKMSPHKPV Trigger: CACTGGCTTGTGTGGGGACATTTTTGAAAGCGTGCATGCGTCATACAGTGTGCCTACTGACACCATCATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||
| CDS TCA 72 bp | GCTGCTACTCATGATGGTGTCAGTAGGCACACTGTATaGCGCATGCACGCTTTCAAAAATGTCCCCACACAA | + |
|
Preference number: 6 (lower is better) Translates to: AATHDGVSRHTV*RMHAFKNVPTQ Trigger: TTGTGTGGGGACATTTTTGAAAGCGTGCATGCGTCATACAGTGTGCCTACTGACACCATCATGAGTAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109099.4 |
||