Pregenerated sensors for ATL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059811Ensembl transcript IDs: ENSMUST00000068282.7, ENSMUST00000112437.8, ENSMUST00000222193.2, ENSMUST00000222415.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCCAGGTTTGAGAAGCAGTTGTGGATGTGCTTCCTGACGTTCTaGAGCTCCTCGTGCTGGTTCTGCTTCACCTGTAATCTCTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: QPRFEKQLWMCFLTF*SSSCWFCFTCNLFS Trigger: TGAGAAGAGATTACAGGTGAAGCAGAACCAGCACGAGGAGCTGCAGAACGTCAGGAAGCACATCCACAACTGCTTCTCAAACCTGGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CCA 90 bp | TTGTTGGATGACAGTCTCTGTCGCTGTGCTGACGAGAGAGCACGGTaGACCCTTCGACGTCTACTGACTTCAAACAGTTTGGCAAACACC | + |
|
Preference number: 1 (lower is better) Translates to: LLDDSLCRCADERAR*TLRRLLTSNSLANT Trigger: GGTGTTTGCCAAACTGTTTGAAGTCAGTAGACGTCGAAGGGTCCACCGTGCTCTCTCGTCAGCACAGCGACAGAGACTGTCATCCAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 90 bp | ATCACCACCGCATACCTGCTCCATACTTTTACAATAGACATCTCTTaGTCCTGCTACTGCTGCCAGGTTATTAGCCTCAGCTGTTGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: ITTAYLLHTFTIDIS*SCYCCQVISLSCCL Trigger: CAGGCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGTATGGAGCAGGTATGCGGTGGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CCA 90 bp | TATGAGACGGATGTGCAATCCATACCCTATGTGCAGCATCAAATCTaGTATGTATACAGCATTATGCAGACCGGCCCAGACGGTCCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: YETDVQSIPYVQHQI*YVYSIMQTGPDGPA Trigger: AGCAGGACCGTCTGGGCCGGTCTGCATAATGCTGTATACATACCAGATTTGATGCTGCACATAGGGTATGGATTGCACATCCGTCTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 90 bp | ACCGCATACCTGCTCCATACTTTTACAATAGACATCTCTTGCTCCTaGTACTGCTGCCAGGTTATTAGCCTCAGCTGTTGCCTGAAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: TAYLLHTFTIDISCS*YCCQVISLSCCLKH Trigger: ATGCTTCAGGCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGTATGGAGCAGGTATGCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 90 bp | CTGCTCCATACTTTTACAATAGACATCTCTTGCTCCTGCTACTGCTaGCAGGTTATTAGCCTCAGCTGTTGCCTGAAGCATAGACTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: LLHTFTIDISCSCYC*QVISLSCCLKHRLW Trigger: CCAAAGTCTATGCTTCAGGCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGTATGGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CCA 90 bp | GACAGCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTaGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGT | + |
|
Preference number: 1 (lower is better) Translates to: DSKEGCKPTNNVHTL*RPSVKPVTLNYFYS Trigger: ACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR GCA 90 bp | GACACCTGGTCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTaGCTTATGTTTTCCTCCATCAAATTATCACCCAGGGGCTTCAAT | + |
|
Preference number: 1 (lower is better) Translates to: DTWSVRPALIEFVTD*LMFSSIKLSPRGFN Trigger: ATTGAAGCCCCTGGGTGATAATTTGATGGAGGAAAACATAAGGCAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGACCAGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222193.2 ENSMUST00000222415.2 |
||
| 3UTR GCA 90 bp | TACCTGCTCCATACTTTTACAATAGACATCTCTTGCTCCTGCTACTaGTGCCAGGTTATTAGCCTCAGCTGTTGCCTGAAGCATAGACTT | + |
|
Preference number: 1 (lower is better) Translates to: YLLHTFTIDISCSCY*CQVISLSCCLKHRL Trigger: AAGTCTATGCTTCAGGCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGTATGGAGCAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR TCA 90 bp | AGAAAGAGAGACTGTTCGGATGGATTCGTTCTGTGTAGGAACAGATaGGAAGGCAGCTGCTTACCACAGACGGAAACAAATACAATCCAT | + |
|
Preference number: 1 (lower is better) Translates to: RKRDCSDGFVLCRNR*EGSCLPQTETNTIH Trigger: ATGGATTGTATTTGTTTCCGTCTGTGGTAAGCAGCTGCCTTCTCATCTGTTCCTACACAGAACGAATCCATCCGAACAGTCTCTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR GCA 90 bp | TACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGGAAGTGTaGCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACAT | + |
|
Preference number: 1 (lower is better) Translates to: YNPYKVGLGQSGREV*QSKQTQTFMHATQH Trigger: ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR CCA 90 bp | AATAGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTaGAAAAATGGTAGCTTTACATATATAGCCCACACGCAAACACAC | + |
|
Preference number: 1 (lower is better) Translates to: NRSDLIGLCKGGYKY*KNGSFTYIAHTQTH Trigger: GTGTGTTTGCGTGTGGGCTATATATGTAAAGCTACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGGTTGGTGGCGACTTTGAGGCCGGGGTGCGGGAGGAGGAAGCAGCCCAGGAACGTTCACACTCTGTaGCGGCCATCTGTGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLVATLRPGCGRRKQPRNVHTL*RPSVKP Trigger: TGGCTTCACAGATGGCCGCCACAGAGTGTGAACGTT...CCTGGGCTGCTTCCTCCTCCCGCACCCCGGCCTCAAAGTCGCCACCAACCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CAA 90 bp | TTAAAGTCTTCATCGATATCTTTCAGTCGTCCATCAAAGCTAGGGTaGGTGGCGACTTTGAGGCCGGGGTGCGGGAGGAGGAAGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LKSSSISFSRPSKLG*VATLRPGCGRRKQP Trigger: GGGCTGCTTCCTCCTCCCGCACCCCGGCCTCAAAGTCGCCACCAACCCTAGCTTTGATGGACGACTGAAAGATATCGATGAAGACTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCACTGTGTAGGAACAGATaGGAAGGCAGCTGCTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: PDAPQAVTESKETAKKAALCRNR*EGSCLP Trigger: TGGTAAGCAGCTGCCTTCTCATCTGTTCCTACACAG...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCACTCTTCTCAAGGAACTaGTTCCCACCTTCCAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PDAPQAVTESKETAKKAALFSRN*FPPSKP Trigger: TGGCTTGGAAGGTGGGAAGCAGTTCCTTGAGAAGAG...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CAA 90 bp | GAGAGAGCACGGTGGACCCTTCGACGTCTACTGACTTCAAACAGTTaGGCAAACACCTTCCTGGGACTCCTCTGTTCCCACAGTGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ERARWTLRRLLTSNS*ANTFLGLLCSHSVS Trigger: TGAAACACTGTGGGAACAGAGGAGTCCCAGGAAGGTGTTTGCCAAACTGTTTGAAGTCAGTAGACGTCGAAGGGTCCACCGTGCTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAATATGCGTTCACACAGTaGCACGAGCCACAAACACTC | + |
|
Preference number: 2 (lower is better) Translates to: APQAVTESKETAKKAANQYAFTQ*HEPQTL Trigger: GAGTGTTTGTGGCTCGTGTCACTGTGTGAACGCATA...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAACAGTGTGGCAGGGGTaGGAGCAGCATAGAAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: APQAVTESKETAKKAANQTVWQG*EQHRRY Trigger: ATATCTTCTATGCTGCTCGCACCCCTGCCACACTGT...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTCTGTCGCTGTGCTGACGAGAGAGCACGGTGGACCCTTCGACGTCTACTGCAAGATCTCTACAAGTaGCTTTCGATCCACTTATCT | + |
|
Preference number: 2 (lower is better) Translates to: SLCRCADERARWTLRRLLQDLYK*LSIHLS Trigger: AGATAAGTGGATCGAAAGTCACTTGTAGAGATCTTG...CAGTAGACGTCGAAGGGTCCACCGTGCTCTCTCGTCAGCACAGCGACAGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCATTTTCGCTCCAAATCTaGAGGTGCAATGTACGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PDAPQAVTESKETAKKAAFSLQI*RCNVRL Trigger: AAGCCGTACATTGCACCTTCAGATTTGGAGCGAAAA...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAAGTGGGAGGGAAGTGTaGCAATCAAAGCAAACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: APQAVTESKETAKKAANQSGREV*QSKQTQ Trigger: CTGAGTTTGCTTTGATTGGCACACTTCCCTCCCACT...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGACCGGCCCAGACGGTCCTGCTTATTGTCCTACATGTGTAAGTGTGAACACTATTGTACAGCAAGCATaGACAAGGGAGAGTGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: QTGPDGPAYCPTCVSVNTIVQQA*TRESGV Trigger: GACTCCACTCTCCCTTGTTCATGCTTGCTGTACAAT...AGTGTTCACACTTACACATGTAGGACAATAAGCAGGACCGTCTGGGCCGGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAGACAGCAAAGAAGGCTaGAAACCAACAAACAACGTT | + |
|
Preference number: 2 (lower is better) Translates to: PDAPQAVTESKETAKKAADSKEG*KPTNNV Trigger: AACGTTGTTTGTTGGTTTGCAGCCTTCTTTGCTGTC...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR CAA 90 bp | TATGCCCAAGTACAAAGGGACGTCAGTGCTAGCCCCATGACGAGGTaGCATAAGACAGCTATAGAGTTTAGGCCAATGAAGCCAGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YAQVQRDVSASPMTR*HKTAIEFRPMKPVS Trigger: ACTGACTGGCTTCATTGGCCTAAACTCTATAGCTGTCTTATGCAACCTCGTCATGGGGCTAGCACTGACGTCCCTTTGTACTTGGGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATCACACACACACACGATaGGAGTGGGGGAAGAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: REVCQSKQTQTFMHATQHHTHTR*EWGKRW Trigger: CCATCTCTTCCCCCACTCCCATCGTGTGTGTGTGTG...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATAACGTTCACACTCTGTaGCGGCCATCTGTGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: REVCQSKQTQTFMHATQHNVHTL*RPSVKP Trigger: TGGCTTCACAGATGGCCGCCACAGAGTGTGAACGTT...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGAATTCTCTTGGGGGTaGGACTGCAGTGCTCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSEFSWG*DCSAQG Trigger: TCCCTGAGCACTGCAGTCTCACCCCCAAGAGAATTC...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTAACCATGGCACAAGTGTGCATGATAACCTGATGCTCCTCAGGCAGTCACCGGACAGCAAAGAAGGCTaGAAACCAACAAACAACGTT | + |
|
Preference number: 2 (lower is better) Translates to: INHGTSVHDNLMLLRQSPDSKEG*KPTNNV Trigger: AACGTTGTTTGTTGGTTTGCAGCCTTCTTTGCTGTC...CGGTGACTGCCTGAGGAGCATCAGGTTATCATGCACACTTGTGCCATGGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGGGGGTGAGACTGCAGTaGTCAGGGAAGATAAATATC | + |
|
Preference number: 2 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRGVRLQ*SGKINI Trigger: GATATTTATCTTCCCTGAGCACTGCAGTCTCACCCC...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCTGAAGGTGCAATGTACGGCTTATCACCACCGCATACCTGCTCCATACTTTGACAGCAAAGAAGGCTaGAAACCAACAAACAACGTT | + |
|
Preference number: 2 (lower is better) Translates to: NLKVQCTAYHHRIPAPYFDSKEG*KPTNNV Trigger: AACGTTGTTTGTTGGTTTGCAGCCTTCTTTGCTGTC...AAAGTATGGAGCAGGTATGCGGTGGTGATAAGCCGTACATTGCACCTTCAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATACTTCACACTGTCTATaGGTTCACACAGTGACACGA | + |
|
Preference number: 2 (lower is better) Translates to: REVCQSKQTQTFMHATQHTSHCL*VHTVTR Trigger: TCGTGTCACTGTGTGAACGCATAGACAGTGTGAAGT...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTTGTGTGAAGATTGTACAGCAAGCATaGACAAGGGAGAGTGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TPQNYLLSYKSSHVICVKIVQQA*TRESGV Trigger: GACTCCACTCTCCCTTGTTCATGCTTGCTGTACAAT...CTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGATAAAACATTCCCATTaGATTCTCTTGGGGGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRIKHSH*ILLGVR Trigger: TCTCACCCCCAAGAGAATTCAATGGGAATGTTTTAT...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR CAA 90 bp | TTTTGTTCCATTAGGTCTGTCAATCACAAACACTTCATTCCAAACTaGTATGCCTGTTGTTTCTCTTTCGCAACCACCTCGCCACGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: FCSIRSVNHKHFIPN*YACCFSFATTSPRK Trigger: TTTACGTGGCGAGGTGGTTGCGAAAGAGAAACAACAGGCATACAAGTTTGGAATGAAGTGTTTGTGATTGACAGACCTAATGGAACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTATTGTACAGCAAGCATaGACAAGGGAGAGTGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGIVQQA*TRESGV Trigger: GACTCCACTCTCCCTTGTTCATGCTTGCTGTACAAT...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGGTAATCTTTAGAAAATaGAAGCTACACGCTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRVIFRK*KLHAVD Trigger: GTCTACAGCGTGTAGCTTTCATTTTCTAAAGATTAC...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATCACAGAACCAGGTTTTaGCATAAACTACAAAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: REVCQSKQTQTFMHATQHHRTRF*HKLQNF Trigger: AAAGTTTTGTAGTTTATGGCAAAACCTGGTTCTGTG...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR CAA 90 bp | TCTACAGTTGATTGTAAACTTTGGTTTATTTTATCTGAGTTCTCATaGTACAGCAAGCATGAACAAGGGAGAGTGGAGTCCATGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: STVDCKLWFILSEFS*YSKHEQGRVESMSR Trigger: TCTGCTCATGGACTCCACTCTCCCTTGTTCATGCTTGCTGTACAATGAGAACTCAGATAAAATAAACCAAAGTTTACAATCAACTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTCACAGAACCAGGTTTTaGCATAAACTACAAAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSHRTRF*HKLQNF Trigger: AAAGTTTTGTAGTTTATGGCAAAACCTGGTTCTGTG...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTGTAATCTTTAGAAAATaGAAGCTACACGCTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGVIFRK*KLHAVD Trigger: GTCTACAGCGTGTAGCTTTCATTTTCTAAAGATTAC...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR CAA 90 bp | TACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTaGTGTGAAGTTTCTGAAACATGCATTTATGTAATACTGGCAATT | + |
|
Preference number: 2 (lower is better) Translates to: YTSELPSQLQEFSCD*CEVSETCIYVILAI Trigger: AATTGCCAGTATTACATAAATGCATGTTTCAGAAACTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR GCA 72 bp | AGGAAGCAGCCCAGGTTTGAGAAGCAGTTGTGGATGTaGTTCCTGACGTTCTGCAGCTCCTCGTGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RKQPRFEKQLWM*FLTFCSSSCWF Trigger: GAACCAGCACGAGGAGCTGCAGAACGTCAGGAAGCACATCCACAACTGCTTCTCAAACCTGGGCTGCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR TCA 72 bp | CTGACGAGAGAGCACGGTGGACCCTTCGACGTCTACTaGCTTCAAACAGTTTGGCAAACACCTTCCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTREHGGPFDVY*LQTVWQTPSWD Trigger: GTCCCAGGAAGGTGTTTGCCAAACTGTTTGAAGTCAGTAGACGTCGAAGGGTCCACCGTGCTCTCTCGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CCA 72 bp | GACAGTCTCTGTCGCTGTGCTGACGAGAGAGCACGGTaGACCCTTCGACGTCTACTGACTTCAAACAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DSLCRCADERAR*TLRRLLTSNSL Trigger: CAAACTGTTTGAAGTCAGTAGACGTCGAAGGGTCCACCGTGCTCTCTCGTCAGCACAGCGACAGAGACTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCGGCCCAGACGGTCCTGCTTATTGTCCTACATGTGTAAGTGTGAACACTAGCCCCATGACGAGGTaGCATAAGACAGCTATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QTGPDGPAYCPTCVSVNTSPMTR*HKTAIE Trigger: CTCTATAGCTGTCTTATGCAACCTCGTCATGGGGCT...AGTGTTCACACTTACACATGTAGGACAATAAGCAGGACCGTCTGGGCCGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR TCA 72 bp | CCATCAAATTATCACCCAGGGGCTTCAATACCTCGCTaGCCTAGAGGAGACATGGACCAAGCCTCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSNYHPGASIPR*PRGDMDQASHL Trigger: CAGATGAGAGGCTTGGTCCATGTCTCCTCTAGGTCAGCGAGGTATTGAAGCCCCTGGGTGATAATTTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222415.2 |
||
| 3UTR TCA 72 bp | GCTACTGCTGCCAGGTTATTAGCCTCAGCTGTTGCCTaGAGCATAGACTTTGGGTGTGGTAGTTCCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ATAARLLASAVA*SIDFGCGSSSP Trigger: AGGAGAGGAACTACCACACCCAAAGTCTATGCTTCAGGCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCTGTCGCTGTGCTGACGAGAGAGCACGGTGGACCCTTCGACGTCTACTGTTATCTGAGTTCTCATaGTACAGCAAGCATGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SLCRCADERARWTLRRLLLSEFS*YSKHEQ Trigger: TTGTTCATGCTTGCTGTACAATGAGAACTCAGATAA...CAGTAGACGTCGAAGGGTCCACCGTGCTCTCTCGTCAGCACAGCGACAGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CCA 72 bp | GAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTaGCGGCCATCTGTGAAGCCAGTTACACTAAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: EGCKPTNNVHTL*RPSVKPVTLNY Trigger: GTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCATTTCTCTTCTTGTTATaGTTGGATGACAGTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PDAPQAVTESKETAKKAAFLFLL*LDDSLC Trigger: ACAGAGACTGTCATCCAACAATAACAAGAAGAGAAA...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGAAGGTGCAATGTACGGCTTATCACCACCGCATACCTGCTCCATACTTTTACAATAGACATCTCTaGCTCCTGCTACTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NLKVQCTAYHHRIPAPYFYNRHL*LLLLLP Trigger: TGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTA...AAAGTATGGAGCAGGTATGCGGTGGTGATAAGCCGTACATTGCACCTTCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR TCA 72 bp | ATATCAAAACTTCACACTGTCTATGCGTTCACACAGTaGCACGAGCCACAAACACTCCTGTCACAGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISKLHTVYAFTQ*HEPQTLLSQDW Trigger: CCAGTCCTGTGACAGGAGTGTTTGTGGCTCGTGTCACTGTGTGAACGCATAGACAGTGTGAAGTTTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR TCA 72 bp | TGCAACAGAGGACAAGTCACAATAAAACATTCCCATTaGATTCTCTTGGGGGTGAGACTGCAGTGCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CNRGQVTIKHSH*ILLGVRLQCSG Trigger: CCCTGAGCACTGCAGTCTCACCCCCAAGAGAATTCAATGGGAATGTTTTATTGTGACTTGTCCTCTGTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR TCA 72 bp | CTGGGACTCCTCTGTTCCCACAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATTTCTCTGAACTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LGLLCSHSVSAI*SIIVPISLNSP Trigger: TGGGGAGTTCAGAGAAATCGGAACAATGATTGATCAGATTGCTGAAACACTGTGGGAACAGAGGAGTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 72 bp | TATAAAGTAGGACTGGGTCAGAGTGGGAGGGAAGTGTaGCAATCAAAGCAAACTCAGACCTTCATGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YKVGLGQSGREV*QSKQTQTFMHA Trigger: TGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCTCCCACTCTGACCCAGTCCTACTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR GCA 72 bp | CTGCTCCATACTTTTACAATAGACATCTCTTGCTCCTaGTACTGCTGCCAGGTTATTAGCCTCAGCTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLHTFTIDISCS*YCCQVISLSCC Trigger: GCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGTATGGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 72 bp | GCATACCTGCTCCATACTTTTACAATAGACATCTCTTaGTCCTGCTACTGCTGCCAGGTTATTAGCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AYLLHTFTIDIS*SCYCCQVISLS Trigger: GCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGTATGGAGCAGGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 72 bp | TGTATACAGCATTATGCAGACCGGCCCAGACGGTCCTaGTTATTGTCCTACATGTGTAAGTGTGAACACTTC | + |
|
Preference number: 3 (lower is better) Translates to: CIQHYADRPRRS*LLSYMCKCEHF Trigger: GAAGTGTTCACACTTACACATGTAGGACAATAAGCAGGACCGTCTGGGCCGGTCTGCATAATGCTGTATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR GCA 72 bp | ATGTGCAGCATCAAATCTGGTATGTATACAGCATTATaGAGACCGGCCCAGACGGTCCTGCTTATTGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: MCSIKSGMYTAL*RPAQTVLLIVL Trigger: TAGGACAATAAGCAGGACCGTCTGGGCCGGTCTGCATAATGCTGTATACATACCAGATTTGATGCTGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTGGCGGCCATCTGTTATCTGAGTTCTCATaGTACAGCAAGCATGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: AKKAANQQTTFTLCGGHLLSEFS*YSKHEQ Trigger: TTGTTCATGCTTGCTGTACAATGAGAACTCAGATAA...CAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 ENSMUST00000222193.2 |
||
| 3UTR GCA 72 bp | ACTTTTACAATAGACATCTCTTGCTCCTGCTACTGCTaGCAGGTTATTAGCCTCAGCTGTTGCCTGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TFTIDISCSCYC*QVISLSCCLKH Trigger: ATGCTTCAGGCAACAGCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATTCGGTAAAGGCTTCATaGTCATTCCCATCTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: REVCQSKQTQTFMHATQHSVKAS*SFPSDS Trigger: AGAATCAGATGGGAATGACAATGAAGCCTTTACCGA...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR GCA 72 bp | TCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTaGCTTATGTTTTCCTCCATCAAATTATCACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVRPALIEFVTD*LMFSSIKLSPR Trigger: CCTGGGTGATAATTTGATGGAGGAAAACATAAGGCAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222193.2 ENSMUST00000222415.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGGAGTTCTCATGTGATTaGTGTGAAGTTTCTGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: TDGNKYNPYKVGLGQSGREFSCD*CEVSET Trigger: TGTTTCAGAAACTTCACACAAATCACATGAGAACTC...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTTGTGTGAAGAAACTTGTATGCCTGTaGTTTCTCTTTCGCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: TPQNYLLSYKSSHVICVKKLVCL*FLFRNH Trigger: GTGGTTGCGAAAGAGAAACAACAGGCATACAAGTTT...CTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CCA 72 bp | GATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTaGAAAAATGGTAGCTTTACATATATAGCCCACACG | + |
|
Preference number: 3 (lower is better) Translates to: DLIGLCKGGYKY*KNGSFTYIAHT Trigger: CGTGTGGGCTATATATGTAAAGCTACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCTGTCGCTGTGCTGACGAGAGAGCACGGTGGACCCTTCGACGTCTACTGCGACGCTCGAGTCGCTaGTCTGTCGCCGGCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCRCADERARWTLRRLLRRSSR*SVAGAS Trigger: TGAGGCGCCGGCGACAGACCAGCGACTCGAGCGTCG...CAGTAGACGTCGAAGGGTCCACCGTGCTCTCTCGTCAGCACAGCGACAGAGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAACGCCTCAGCCCCTGCTaGGGCTGCTGCCTTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQRLSPC*GCCLRA Trigger: AGCGCGAAGGCAGCAGCCGCAGCAGGGGCTGAGGCG...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000222193.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTGGCGGCCATCTGCCCTGCTGCGGCTGCTaGCTTCGCGCTGCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKKAANQQTTFTLCGGHLPCCGC*LRAASS Trigger: GGACGAGGCAGCGCGAAGGCAGCAGCCGCAGCAGGG...CAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000222193.2 |
||
| CDS-3UTR GCA 90 bp | ATTAACCATGGCACAAGTGTGCATGATAACCTGATGCTCCTCAGGCAGTCACCGAGCCCCTGCTGCGGCTaGTGCCTTCGCGCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: INHGTSVHDNLMLLRQSPSPCCG*CLRAAS Trigger: CGAGGCAGCGCGAAGGCAGCAGCCGCAGCAGGGGCT...CGGTGACTGCCTGAGGAGCATCAGGTTATCATGCACACTTGTGCCATGGTTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000222193.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTGGCGGCCATCTGCGACGCTCGAGTCGCTaGTCTGTCGCCGGCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKKAANQQTTFTLCGGHLRRSSR*SVAGAS Trigger: TGAGGCGCCGGCGACAGACCAGCGACTCGAGCGTCG...CAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000222193.2 |
||
| CDS-3UTR GCA 90 bp | GACACCTGGTCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTGCCTTATGCGCCTCAGCCCCTGCTaGGGCTGCTGCCTTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DTWSVRPALIEFVTDCLMRLSPC*GCCLRA Trigger: AGCGCGAAGGCAGCAGCCGCAGCAGGGGCTGAGGCG...CATAAGGCAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGACCAGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR GCA 90 bp | ATGATGAGACACCTGGTCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTGCCCTGCTGCGGCTGCTaGCTTCGCGCTGCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MMRHLVSQACFDRVCYRLPCCGC*LRAASS Trigger: GGACGAGGCAGCGCGAAGGCAGCAGCCGCAGCAGGG...CAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGACCAGGTGTCTCATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| 3UTR CAA 72 bp | TCATCGATATCTTTCAGTCGTCCATCAAAGCTAGGGTaGGTGGCGACTTTGAGGCCGGGGTGCGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSISFSRPSKLG*VATLRPGCGRR Trigger: CCTCCTCCCGCACCCCGGCCTCAAAGTCGCCACCAACCCTAGCTTTGATGGACGACTGAAAGATATCGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGAAGGTGCAATGTACGGCTTATCACCACCGCATACCTGCTCCATACTTTCTGCTGCCTTCGCGCTaGCTCGTCCCCCTCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLKVQCTAYHHRIPAPYFLLPSR*LVPLRH Trigger: ATGGCGGAGGGGGACGAGGCAGCGCGAAGGCAGCAG...AAAGTATGGAGCAGGTATGCGGTGGTGATAAGCCGTACATTGCACCTTCAGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR TCA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAGAAGCAGCCCAGGTTTaGGAAGCAGTTGTGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PDAPQAVTESKETAKKAAEAAQV*EAVVDV Trigger: CACATCCACAACTGCTTCTCAAACCTGGGCTGCTTC...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATCTGCTGCCTTCGCGCTaGCTCGTCCCCCTCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHLLPSR*LVPLRH Trigger: ATGGCGGAGGGGGACGAGGCAGCGCGAAGGCAGCAG...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| 3UTR CAA 72 bp | CGGTGGACCCTTCGACGTCTACTGACTTCAAACAGTTaGGCAAACACCTTCCTGGGACTCCTCTGTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWTLRRLLTSNS*ANTFLGLLCSH Trigger: GTGGGAACAGAGGAGTCCCAGGAAGGTGTTTGCCAAACTGTTTGAAGTCAGTAGACGTCGAAGGGTCCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGACACGAGCCACAAACACTCCTGTCACAGGACTGGACTCAGTAGCCTACGCCTCAGCTGTTGCCTaGAGCATAGACTTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVTRATNTPVTGLDSVAYASAVA*SIDFGC Trigger: ACACCCAAAGTCTATGCTTCAGGCAACAGCTGAGGC...GTAGGCTACTGAGTCCAGTCCTGTGACAGGAGTGTTTGTGGCTCGTGTCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGACACGAGCCACAAACACTCCTGTCACAGGACTGGACTCAGTAGCCTACCTCTTCTCAAGGAACTaGTTCCCACCTTCCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVTRATNTPVTGLDSVAYLFSRN*FPPSKP Trigger: TGGCTTGGAAGGTGGGAAGCAGTTCCTTGAGAAGAG...GTAGGCTACTGAGTCCAGTCCTGTGACAGGAGTGTTTGTGGCTCGTGTCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAATCTTGCTCCTGCTACTaGTGCCAGGTTATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQSCSCY*CQVISL Trigger: GAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGA...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAACAGTCTTTAATGGTTaGCTGGCTATCAAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PDAPQAVTESKETAKKAATVFNG*LAIKGT Trigger: GGTGCCTTTGATAGCCAGTCAACCATTAAAGACTGT...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTGGCGGCCATCTGCTCTTCTCAAGGAACTaGTTCCCACCTTCCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKKAANQQTTFTLCGGHLLFSRN*FPPSKP Trigger: TGGCTTGGAAGGTGGGAAGCAGTTCCTTGAGAAGAG...CAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAGACATCTCTTGCTCCTaGTACTGCTGCCAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQDISCS*YCCQVI Trigger: AATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTC...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGTGCTCCTGCTACTGCTaGCAGGTTATTAGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLCSCYC*QVISLS Trigger: GCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCA...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAACTGGTCAGTCAGGCCTaGTTTGATAGAGTTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQLVSQA*FDRVCY Trigger: GTAACAAACTCTATCAAAGCAGGCCTGACTGACCAG...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAATCTTTAATGGTTGACTaGCTATCAAAGGCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQSLMVD*LSKAPW Trigger: CCAGGGTGCCTTTGATAGCCAGTCAACCATTAAAGA...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAATTTGAGAAGCAGTTGTaGATGTGCTTCCTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQFEKQL*MCFLTF Trigger: GAACGTCAGGAAGCACATCCACAACTGCTTCTCAAA...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAACCTTCCAAGCCATATaGGTGCTCATAAGGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQTFQAI*VLIRIT Trigger: AGTTATCCTTATGAGCACTCATATGGCTTGGAAGGT...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGTGTGGATGTGCTTCCTaGCGTTCTGCAGCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRCGCAS*RSAAPR Trigger: ACGAGGAGCTGCAGAACGTCAGGAAGCACATCCACA...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| 3UTR CAA 72 bp | GTACAAAGGGACGTCAGTGCTAGCCCCATGACGAGGTaGCATAAGACAGCTATAGAGTTTAGGCCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQRDVSASPMTR*HKTAIEFRPMK Trigger: CTTCATTGGCCTAAACTCTATAGCTGTCTTATGCAACCTCGTCATGGGGCTAGCACTGACGTCCCTTTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTGGCGGCCATCTGACCTTCCAAGCCATATaGGTGCTCATAAGGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: AKKAANQQTTFTLCGGHLTFQAI*VLIRIT Trigger: AGTTATCCTTATGAGCACTCATATGGCTTGGAAGGT...CAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCTTCAATACCTCGCTGACCTAGAGGAGACATGGACCAAGCCTCTCATCAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QGLQYLADLEETWTKPLISVSAI*SIIVPI Trigger: AATCGGAACAATGATTGATCAGATTGCTGAAACACT...GATGAGAGGCTTGGTCCATGTCTCCTCTAGGTCAGCGAGGTATTGAAGCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222415.2 |
||
| CDS-3UTR GCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGACAATAGACATCTCTTaGTCCTGCTACTGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLTIDIS*SCYCCQ Trigger: CTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGT...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAAGAGTACTTAACATATaGCCAAGTACAAAGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQRVLNI*PSTKGR Trigger: ACGTCCCTTTGTACTTGGGCATATGTTAAGTACTCT...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAGAGTTTGTTACAGACTaGCTTATGTTTTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQEFVTD*LMFSSI Trigger: GATGGAGGAAAACATAAGGCAGTCTGTAACAAACTC...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGCTATCAAAGGCACCCTaGGTATCCATTAGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLLSKAP*VSISST Trigger: TGTGCTGCTAATGGATACCCAGGGTGCCTTTGATAG...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR TCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTTGTGGATGTGCTTCCTaGCGTTCTGCAGCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSCGCAS*RSAAPR Trigger: ACGAGGAGCTGCAGAACGTCAGGAAGCACATCCACA...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAGGTAGTTCCTCTCCTTaGTATATTTTAATGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: APQAVTESKETAKKAANQGSSSP*YILMYA Trigger: GGCATACATTAAAATATATCAAGGAGAGGAACTACC...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGTTTTCGCTCCAAATCTaGAGGTGCAATGTACGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLFSLQI*RCNVRL Trigger: AAGCCGTACATTGCACCTTCAGATTTGGAGCGAAAA...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATTCTTGCTCCTGCTACTaGTGCCAGGTTATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHSCSCY*CQVISL Trigger: GAGGCTAATAACCTGGCAGCAGTAGCAGGAGCAAGA...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATTGCAGCTCCTCGTGCTaGTTCTGCTTCACCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHCSSSC*FCFTCN Trigger: ATTACAGGTGAAGCAGAACCAGCACGAGGAGCTGCA...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTTCTCATTGTACAGCAAGCATGAACAAGGGAGAGTGGAGTCCATGTGCAGCTCCTCGTGCTaGTTCTGCTTCACCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSEFSLYSKHEQGRVESMCSSSC*FCFTCN Trigger: ATTACAGGTGAAGCAGAACCAGCACGAGGAGCTGCA...CATGGACTCCACTCTCCCTTGTTCATGCTTGCTGTACAATGAGAACTCAGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGAAGCAGCCCAGGTTTaGGAAGCAGTTGTGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSEAAQV*EAVVDV Trigger: CACATCCACAACTGCTTCTCAAACCTGGGCTGCTTC...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGCCTCAGCTGTTGCCTaGAGCATAGACTTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSASAVA*SIDFGC Trigger: ACACCCAAAGTCTATGCTTCAGGCAACAGCTGAGGC...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGGAAGCCAGTCAGTCCTaGGATGATATACATAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLEASQS*DDIHSK Trigger: TTTGCTATGTATATCATCTCAGGACTGACTGGCTTC...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGTCAAGCTCAAAGTTATaGTCATCTTCATGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLSSSKL*SSSWAR Trigger: TCTCGCCCATGAAGATGACCATAACTTTGAGCTTGA...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATAGGAGCAAGCAGCAATaGAACCAGATTTCGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHRSKQQ*NQISKL Trigger: GAGCTTCGAAATCTGGTTCCATTGCTGCTTGCTCCT...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGCAAGATCTCTACAAGTaGCTTTCGATCCACTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLQDLYK*LSIHLS Trigger: AGATAAGTGGATCGAAAGTCACTTGTAGAGATCTTG...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATTTTTCGCTCCAAATCTaGAGGTGCAATGTACGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHFSLQI*RCNVRL Trigger: AAGCCGTACATTGCACCTTCAGATTTGGAGCGAAAA...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGAGACACCTGGTCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTGGAAGCCAGTCAGTCCTaGGATGATATACATAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MMRHLVSQACFDRVCYRLEASQS*DDIHSK Trigger: TTTGCTATGTATATCATCTCAGGACTGACTGGCTTC...CAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGACCAGGTGTCTCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222415.2 |
||
| CDS-3UTR TCA 90 bp | ATTAACCATGGCACAAGTGTGCATGATAACCTGATGCTCCTCAGGCAGTCACCGAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: INHGTSVHDNLMLLRQSPSVSAI*SIIVPI Trigger: AATCGGAACAATGATTGATCAGATTGCTGAAACACT...CGGTGACTGCCTGAGGAGCATCAGGTTATCATGCACACTTGTGCCATGGTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGGAGTTTGTTACAGACTaGCTTATGTTTTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLEFVTD*LMFSSI Trigger: GATGGAGGAAAACATAAGGCAGTCTGTAACAAACTC...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGTCTTTAATGGTTGACTaGCTATCAAAGGCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRSLMVD*LSKAPW Trigger: CCAGGGTGCCTTTGATAGCCAGTCAACCATTAAAGA...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATTTTGAGAAGCAGTTGTaGATGTGCTTCCTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHFEKQL*MCFLTF Trigger: GAACGTCAGGAAGCACATCCACAACTGCTTCTCAAA...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGGGTAGTTCCTCTCCTTaGTATATTTTAATGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSVAAICEASYTKLLLQLGSSSP*YILMYA Trigger: GGCATACATTAAAATATATCAAGGAGAGGAACTACC...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTTCCTCGTGCTGGTTCTaGTTCACCTGTAATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSSSCWF*FTCNLF Trigger: GAAGAGATTACAGGTGAAGCAGAACCAGCACGAGGA...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTTGCTCCTGCTACTGCTaGCAGGTTATTAGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGCSCYC*QVISLS Trigger: GCTGAGGCTAATAACCTGGCAGCAGTAGCAGGAGCA...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTAGGAGCAAGCAGCAATaGAACCAGATTTCGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSRSKQQ*NQISKL Trigger: GAGCTTCGAAATCTGGTTCCATTGCTGCTTGCTCCT...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGCAAGATCTCTACAAGTaGCTTTCGATCCACTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRQDLYK*LSIHLS Trigger: AGATAAGTGGATCGAAAGTCACTTGTAGAGATCTTG...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTACAGTGTGGCAGGGGTaGGAGCAGCATAGAAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGTVWQG*EQHRRY Trigger: ATATCTTCTATGCTGCTCGCACCCCTGCCACACTGT...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGTGTGCCAATCAAAGCAAACTCAGACCTTCATGCATGCAACTCAACATAGAGTACTTAACATATaGCCAAGTACAAAGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: REVCQSKQTQTFMHATQHRVLNI*PSTKGR Trigger: ACGTCCCTTTGTACTTGGGCATATGTTAAGTACTCT...ATGTTGAGTTGCATGCATGAAGGTCTGAGTTTGCTTTGATTGGCACACTTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTGCCTTATGTTTTCCTCAGAGTACTTAACATATaGCCAAGTACAAAGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQACFDRVCYRLPYVFLRVLNI*PSTKGR Trigger: ACGTCCCTTTGTACTTGGGCATATGTTAAGTACTCT...GAGGAAAACATAAGGCAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222415.2 |
||
| CDS-3UTR GCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTCTGGTCAGTCAGGCCTaGTTTGATAGAGTTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSLVSQA*FDRVCY Trigger: GTAACAAACTCTATCAAAGCAGGCCTGACTGACCAG...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGAATCTGTACTGGGCATaGTTTCTTCATAACCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRNLYWA*FLHNLI Trigger: GATGAGGTTATGAAGAAACCATGCCCAGTACAGATT...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| 3UTR CAA 72 bp | ATTAGGTCTGTCAATCACAAACACTTCATTCCAAACTaGTATGCCTGTTGTTTCTCTTTCGCAACCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRSVNHKHFIPN*YACCFSFATTS Trigger: CGAGGTGGTTGCGAAAGAGAAACAACAGGCATACAAGTTTGGAATGAAGTGTTTGTGATTGACAGACCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR TCA 90 bp | ACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTTGTGTGAAGGAAGCCAGTCAGTCCTaGGATGATATACATAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPQNYLLSYKSSHVICVKEASQS*DDIHSK Trigger: TTTGCTATGTATATCATCTCAGGACTGACTGGCTTC...CTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTTCCTCGTGCTGGTTCTaGTTCACCTGTAATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGSSCWF*FTCNLF Trigger: GAAGAGATTACAGGTGAAGCAGAACCAGCACGAGGA...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTGACATCTCTTGCTCCTaGTACTGCTGCCAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGDISCS*YCCQVI Trigger: AATAACCTGGCAGCAGTAGCAGGAGCAAGAGATGTC...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTACAATAGACATCTCTTaGTCCTGCTACTGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGTIDIS*SCYCCQ Trigger: CTGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGT...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTGAAGTCCAGGAGAAATaGTTTCCCTTTACGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGEVQEK*FPFTES Trigger: GCTTTCCGTAAAGGGAAATCATTTCTCCTGGACTTC...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR TCA 90 bp | AGGAGCGATTTAATAGGTCTCTGTAAAGGAGGTTATAAGTACTGGAAAAATGGTACAGTCTTTAATGGTTaGCTGGCTATCAAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSDLIGLCKGGYKYWKNGTVFNG*LAIKGT Trigger: GGTGCCTTTGATAGCCAGTCAACCATTAAAGACTGT...ACCATTTTTCCAGTACTTATAACCTCCTTTACAGAGACCTATTAAATCGCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR GCA 90 bp | ACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTTGTGTGAAGGACAAATTATATACCTaGACAGAGCTGGTCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPQNYLLSYKSSHVICVKDKLYT*TELVIV Trigger: CACTATGACCAGCTCTGTGCAGGTATATAATTTGTC...CTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTTGTGTGAAGGAGAACAATCTGTACTaGGCATGGTTTCTTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPQNYLLSYKSSHVICVKENNLY*AWFLHN Trigger: GTTATGAAGAAACCATGCCCAGTACAGATTGTTCTC...CTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTTTATGGTCATCTTCATaGGCGAGAACAATCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSLWSSS*ARTICT Trigger: AGTACAGATTGTTCTCGCCCATGAAGATGACCATAA...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR TCA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSSVSAI*SIIVPI Trigger: AATCGGAACAATGATTGATCAGATTGCTGAAACACT...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS CCA 90 bp | CACCAATCCAGCTTTGAGAATCCTAGGGAGGTCGTAGACGAGACGTaGTTAACTCCGACGCTCGAGTCGCTGGTCTGTCGCCGGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQSSFENPREVVDET*LTPTLESLVCRRRL Trigger: GAGGCGCCGGCGACAGACCAGCGACTCGAGCGTCGGAGTTAACCACGTCTCGTCTACGACCTCCCTAGGATTCTCAAAGCTGGATTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS-3UTR CAA 90 bp | CCTGATGCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCATTGAGCGCCACTTCCTaGAGATCCAGGTGTTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PDAPQAVTESKETAKKAALSATS*RSRCFR Trigger: GCGAAAACACCTGGATCTCAAGGAAGTGGCGCTCAA...TGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGCATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGCTTCAATACCTCGCTGACCTAGAGGAGACATGGACCAAGCCTCTCATCAGCCCCATGACGAGGTaGCATAAGACAGCTATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGLQYLADLEETWTKPLISPMTR*HKTAIE Trigger: CTCTATAGCTGTCTTATGCAACCTCGTCATGGGGCT...GATGAGAGGCTTGGTCCATGTCTCCTCTAGGTCAGCGAGGTATTGAAGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222415.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCAGGCAGTCACCGAGTCTAAGGAGACAGCAAAGAAGGCTGCAAACCAAAGCCCCATGACGAGGTaGCATAAGACAGCTATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APQAVTESKETAKKAANQSPMTR*HKTAIE Trigger: CTCTATAGCTGTCTTATGCAACCTCGTCATGGGGCT...TTGGTTTGCAGCCTTCTTTGCTGTCTCCTTAGACTCGGTGACTGCCTGAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS GCA 90 bp | AAAGCTCCTGCCACAGACACCACGACTATGTTAAGATCCCGTATGTaGTCCTGCAGCAGGATCTGCTCCAAAGCCTCTTCATCAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAPATDTTTMLRSRM*SCSRICSKASSSSS Trigger: TGAGCTTGATGAAGAGGCTTTGGAGCAGATCCTGCTGCAGGAGCACATACGGGATCTTAACATAGTCGTGGTGTCTGTGGCAGGAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTGACACGAGCCACAAACACTCCTGTCACAGGACTGGACTCAGTAGCCTACTACAATAGACATCTCTaGCTCCTGCTACTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVTRATNTPVTGLDSVAYYNRHL*LLLLLP Trigger: TGGCAGCAGTAGCAGGAGCAAGAGATGTCTATTGTA...GTAGGCTACTGAGTCCAGTCCTGTGACAGGAGTGTTTGTGGCTCGTGTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGAGCCCCATGACGAGGTaGCATAAGACAGCTATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSVAAICEASYTKLLLQLSPMTR*HKTAIE Trigger: CTCTATAGCTGTCTTATGCAACCTCGTCATGGGGCT...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAAGGCTGCAAACCAACAAACAACGTTCACACTCTGTGGCGGCCATCTGTCAGTCAGGCCTGCTTaGATAGAGTTTGTTACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AKKAANQQTTFTLCGGHLSVRPA*IEFVTD Trigger: GTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGA...CAGATGGCCGCCACAGAGTGTGAACGTTGTTTGTTGGTTTGCAGCCTTCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS CCA 90 bp | TGCAGCAGGATCTGCTCCAAAGCCTCTTCATCAAGCTCAAAGTTATaGTCATCTTCATGGGCGAGAACAATCTGTACTGGGCATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSRICSKASSSSSKL*SSSWARTICTGHGF Trigger: GAAACCATGCCCAGTACAGATTGTTCTCGCCCATGAAGATGACCATAACTTTGAGCTTGATGAAGAGGCTTTGGAGCAGATCCTGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAGTTCTCATTGTACAGCAAGCATGAACAAGGGAGAGTGGAGTCCATGGGAAGCAGCCCAGGTTaGAGAAGCAGTTGTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LSEFSLYSKHEQGRVESMGSSPG*RSSCGC Trigger: ACATCCACAACTGCTTCTCAAACCTGGGCTGCTTCC...CATGGACTCCACTCTCCCTTGTTCATGCTTGCTGTACAATGAGAACTCAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGTTGAGCGCCACTTCCTaGAGATCCAGGTGTTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRLSATS*RSRCFR Trigger: GCGAAAACACCTGGATCTCAAGGAAGTGGCGCTCAA...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGTCAGGCCTGCTTTGATAGAGTTTGTTACAGACTGCCTTATGTTTTCCTCCACCAATCCAGCTTaGAGAATCCTAGGGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WSVRPALIEFVTDCLMFSSTNPA*RILGRS Trigger: CGACCTCCCTAGGATTCTCAAAGCTGGATTGGTGGA...GGAAAACATAAGGCAGTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS GCA 90 bp | ACCACGACTATGTTAAGATCCCGTATGTGCTCCTGCAGCAGGATCTaGTCCAAAGCCTCTTCATCAAGCTCAAAGTTATGGTCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TTTMLRSRMCSCSRI*SKASSSSSKLWSSS Trigger: TGAAGATGACCATAACTTTGAGCTTGATGAAGAGGCTTTGGAGCAGATCCTGCTGCAGGAGCACATACGGGATCTTAACATAGTCGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CAA 90 bp | ATTAACCATGGCACAAGTGTGCATGATAACCTGATGCTCCTCAGGCAGTCACCGAAACTTGTATGCCTGTaGTTTCTCTTTCGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: INHGTSVHDNLMLLRQSPKLVCL*FLFRNH Trigger: GTGGTTGCGAAAGAGAAACAACAGGCATACAAGTTT...CGGTGACTGCCTGAGGAGCATCAGGTTATCATGCACACTTGTGCCATGGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS TCA 90 bp | TCACCCAGGGGCTTCAATACCTGTTCCCACAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATTTCTCTGAACTCCCCAGAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPRGFNTCSHSVSAI*SIIVPISLNSPEYL Trigger: TAAGTACTCTGGGGAGTTCAGAGAAATCGGAACAATGATTGATCAGATTGCTGAAACACTGTGGGAACAGGTATTGAAGCCCCTGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS CCA 90 bp | TGCTCCAAAGCCTCTTCATCAAGCTCAAAGTTATGGTCATCTTCATaGGCGAGAACAATCTGTACTGGGCATGGTTTCTTCATAACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSKASSSSSKLWSSS*ARTICTGHGFFITS Trigger: TGAGGTTATGAAGAAACCATGCCCAGTACAGATTGTTCTCGCCCATGAAGATGACCATAACTTTGAGCTTGATGAAGAGGCTTTGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTGGCGGCCATCTGTGAAGCCAGTTACACTAAACTACTTCTACAGTTGCACTTCATTCCAAACTaGTATGCCTGTTGTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSVAAICEASYTKLLLQLHFIPN*YACCFS Trigger: AGAGAAACAACAGGCATACAAGTTTGGAATGAAGTG...CAACTGTAGAAGTAGTTTAGTGTAACTGGCTTCACAGATGGCCGCCACAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CAA 90 bp | CTTACCACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTCCAGTCAAGGGTTCATaGTTTCCACCAATCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTTDGNKYNPYKVGLGQSPVKGS*FPPIQL Trigger: AAGCTGGATTGGTGGAAACAATGAACCCTTGACTGG...ACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGTGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS TCA 90 bp | TTACAGCTTCCATTCTGTTCCTGTTCCCACAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATTTCTCTGAACTCCCCAGAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LQLPFCSCSHSVSAI*SIIVPISLNSPEYL Trigger: TAAGTACTCTGGGGAGTTCAGAGAAATCGGAACAATGATTGATCAGATTGCTGAAACACTGTGGGAACAGGAACAGAATGGAAGCTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222415.2 |
||
| CDS-3UTR CAA 90 bp | ACAGACGGAAACAAATACAATCCATATAAAGTAGGACTGGGTCAGAGTGGGAGGTCCACCAATCCAGCTTaGAGAATCCTTGTTATACAT | + |
|
Preference number: 5 (lower is better) Translates to: TDGNKYNPYKVGLGQSGRSTNPA*RILVIH Trigger: ATGTATAACAAGGATTCTCAAAGCTGGATTGGTGGA...CCTCCCACTCTGACCCAGTCCTACTTTATATGGATTGTATTTGTTTCCGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS-3UTR CAA 90 bp | ACACCTCAGAATTACCTTCTCAGCTACAAGAGTTCTCATGTGATTTGTGTGAAGTCAGTCAGGCCTGCTTaGATAGAGTTTGTTACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TPQNYLLSYKSSHVICVKSVRPA*IEFVTD Trigger: GTCTGTAACAAACTCTATCAAAGCAGGCCTGACTGA...CTTCACACAAATCACATGAGAACTCTTGTAGCTGAGAAGGTAATTCTGAGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||
| CDS GCA 72 bp | CTCGAGTCGCTGGTCTGTCGCCGGCGCCTCAGCCCCTaGTGCGGCTGCTGCCTTCGCGCTGCCTCGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LESLVCRRRLSP*CGCCLRAASSP Trigger: GGGGGACGAGGCAGCGCGAAGGCAGCAGCCGCAGCAGGGGCTGAGGCGCCGGCGACAGACCAGCGACTCGAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000222193.2 |
||
| CDS CCA 72 bp | AGCTTTGAGAATCCTAGGGAGGTCGTAGACGAGACGTaGTTAACTCCGACGCTCGAGTCGCTGGTCTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SFENPREVVDET*LTPTLESLVCR Trigger: GCGACAGACCAGCGACTCGAGCGTCGGAGTTAACCACGTCTCGTCTACGACCTCCCTAGGATTCTCAAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222193.2 |
||
| CDS GCA 72 bp | GCCACAGACACCACGACTATGTTAAGATCCCGTATGTaGTCCTGCAGCAGGATCTGCTCCAAAGCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATDTTTMLRSRM*SCSRICSKASS Trigger: TGAAGAGGCTTTGGAGCAGATCCTGCTGCAGGAGCACATACGGGATCTTAACATAGTCGTGGTGTCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS CCA 72 bp | GCCTCTTCATCAAGCTCAAAGTTATGGTCATCTTCATaGGCGAGAACAATCTGTACTGGGCATGGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSSKLWSSS*ARTICTGHGFF Trigger: GAAGAAACCATGCCCAGTACAGATTGTTCTCGCCCATGAAGATGACCATAACTTTGAGCTTGATGAAGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS CCA 72 bp | ATCTGCTCCAAAGCCTCTTCATCAAGCTCAAAGTTATaGTCATCTTCATGGGCGAGAACAATCTGTACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ICSKASSSSSKL*SSSWARTICTG Trigger: CCCAGTACAGATTGTTCTCGCCCATGAAGATGACCATAACTTTGAGCTTGATGAAGAGGCTTTGGAGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068282.7 |
||
| CDS TCA 72 bp | GGCTTCAATACCTGTTCCCACAGTGTTTCAGCAATCTaGTCAATCATTGTTCCGATTTCTCTGAACTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GFNTCSHSVSAI*SIIVPISLNSP Trigger: TGGGGAGTTCAGAGAAATCGGAACAATGATTGATCAGATTGCTGAAACACTGTGGGAACAGGTATTGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068282.7 ENSMUST00000112437.8 |
||