Pregenerated sensors for ATL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021066Ensembl transcript IDs: ENSMUST00000021466.10, ENSMUST00000223456.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTCTTCTCACTaGGTTGGAAAACCGCAAGCAGAGGCAGCAGTGGTATGCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: ADCEVVRGLQTGSSH*VGKPQAEAAVVCPA Trigger: TGCTGGGCATACCACTGCTGCCTCTGCTTGCGGTTTTCCAACTCAGTGAGAAGAGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR GCA 90 bp | CATGGCTCTGAGACACAGCACAGGCTTCCTGACCACATAGAATACTaGCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: HGSETQHRLPDHIEY*LPSGWAKLPKTTIR Trigger: CCTGATTGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTCAGAGCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 90 bp | TATCTTATTAACATGTTTTCCTACAGATATGACCACATTCTGAAGTaGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: YLINMFSYRYDHILK*ELFQLADLDTYQGM Trigger: CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAATGTGGTCATATCTGTAGGAAAACATGTTAATAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 90 bp | GAAACAGAAGAGGATGAGAGTACATCTGTGATCAGTTGCTACGTGTaGTGTCAAGTGTTTTCTGGAATGAGATGGTTTGACTATTACCAT | + |
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Preference number: 1 (lower is better) Translates to: ETEEDESTSVISCYV*CQVFSGMRWFDYYH Trigger: ATGGTAATAGTCAAACCATCTCATTCCAGAAAACACTTGACACCACACGTAGCAACTGATCACAGATGTACTCTCATCCTCTTCTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 90 bp | AAGCCAATATGGCATATGCTACCAAATGCTGTATTAGGAAACTGCTaGAGACTCTGGACAAAAAGTAGTACAGGAAGAGATTATCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: KPIWHMLPNAVLGNC*RLWTKSSTGRDYQH Trigger: ATGCTGATAATCTCTTCCTGTACTACTTTTTGTCCAGAGTCTCCAGCAGTTTCCTAATACAGCATTTGGTAGCATATGCCATATTGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR TCA 90 bp | TGGGACATTATCAGGGGAAGAGAATTAGTGCGCATACGGCCAGCTGTCTGTAAAGGAGAAACCCTGTCTTaGACCACCACCGCCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: WDIIRGRELVRIRPAVCKGETLS*TTTAPT Trigger: AGTGGGGGCGGTGGTGGTTCAAGACAGGGTTTCTCC...TTTACAGACAGCTGGCCGTATGCGCACTAATTCTCTTCCCCTGATAATGTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CAA 90 bp | ATTGTGAAGTTGTACGAGGCCTACAGACAGGCTCTTCTCACTGAGTaGGAAAACCGCAAGCAGAGGCAGCAGTGGTATGCCCAGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: IVKLYEAYRQALLTE*ENRKQRQQWYAQQH Trigger: ATGCTGCTGGGCATACCACTGCTGCCTCTGCTTGCGGTTTTCCAACTCAGTGAGAAGAGCCTGTCTGTAGGCCTCGTACAACTTCACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGAACATGTTTCTAATTTaGGAGGTGGGCAGGGCCATC | + |
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Preference number: 2 (lower is better) Translates to: ILKWELFQLADLDTYQGMNMFLI*EVGRAI Trigger: GATGGCCCTGCCCACCTCCCAAATTAGAAACATGTT...CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CAA 90 bp | CTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGCTGAAGTaGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAG | + |
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Preference number: 2 (lower is better) Translates to: LFQLADLDTYQGMLK*LFMKELEQIVKLYE Trigger: CTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTTCAGCATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR TCA 90 bp | GACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACAATGCTCACACCACCTTaGGCACCCAGTCTTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: DHIEYCLPSGWAKLPKTTMLTPP*APSLVL Trigger: CAAGACAAGACTGGGTGCTCAAGGTGGTGTGAGCAT...TGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR TCA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGAGGAAACTGCACATTaGCAAATAACCATGCATACA | + |
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Preference number: 2 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWEETAH*QITMHT Trigger: TGTATGCATGGTTATTTGTCAATGTGCAGTTTCCTC...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR TCA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGCACCCAGTCTTGTCTTaGAATGGTATCAGAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWHPVLS*NGIRKK Trigger: TTTCTTTCTGATACCATTTCAAGACAAGACTGGGTG...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAAGTTGAAAGACAGCTTGAGCAAATGCACCTTGAACTaGGGCAGAATAGACCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: VSNLGGGQGHHKLKDSLSKCTLN*GRIDLS Trigger: TGAAAGGTCTATTCTGCCTCAGTTCAAGGTGCATTT...GCTCAAGCTGTCTTTCAACTTGTGATGGCCCTGCCCACCTCCCAAATTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGAGCACTTTGCATGTTTaGATGGAAACAAAAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKSTLHV*METKAL Trigger: CAAAGCTTTTGTTTCCATGCAAACATGCAAAGTGCT...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGATGCATACATACATCTaGTCATTAAACACTGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: ILKWELFQLADLDTYQGMMHTYI*SLNTGV Trigger: TACTCCAGTGTTTAATGAGCAGATGTATGTATGCAT...CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | TTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTGAGCCAGTGAGCATTTaGTTTAATGTTAGGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: FMKELEQIVKLYEAYRQAEPVSI*FNVRKQ Trigger: CTGTTTCCTAACATTAAACCAAATGCTCACTGGCTC...AGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTTGCTAATACGGGACCACATAGAATACTaGCTTCCATCAGGGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: IQDYNKYMPLSAQLLLIRDHIEY*LPSGWA Trigger: AGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC...CCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | GATGCTACAGGTAGCAACATGTTTCTAATTTGGGAGGTGGGCAGGGCCATCACACTGCTCATTAAACACTaGAGTAAAGAAGTAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: DATGSNMFLIWEVGRAITLLIKH*SKEVNC Trigger: ACAGTTTACTTCTTTACTCCAGTGTTTAATGAGCAG...TGTGATGGCCCTGCCCACCTCCCAAATTAGAAACATGTTGCTACCTGTAGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATAGTTCGAGGCCAGCCTaGTTTACAGAGCAAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HKPIMKREAEAKIWLLGHSSRPA*FTEQVP Trigger: TGGAACTTGCTCTGTAAACCAGGCTGGCCTCGAACT...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | GTACCAGGGAATGCTGAAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAACTAAAATATGGCTACTaGGACATTATCAGGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VPGNAEVALHEGTGADCELKYGY*DIIRGR Trigger: TCTTCCCCTGATAATGTCCCAGTAGCCATATTTTAG...TTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTTCAGCATTCCCTGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CAA 90 bp | GAAATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTaGCTAATACGGCTTCCTTCCTTTGAGGCAGAGCACATAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: EIQDYNKYMPLSAQL*LIRLPSFEAEHIST Trigger: TGTACTTATGTGCTCTGCCTCAAAGGAAGGAAGCCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CAA 90 bp | TTTAAGTTTGAAGTGGGATCAGAAATAGTGTATGCTCACACCACCTaGAGCACCCAGTCTTGTCTTGAAATGGTATCAGAAAGAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: FKFEVGSEIVYAHTT*STQSCLEMVSERKC Trigger: GCATTTTCTTTCTGATACCATTTCAAGACAAGACTGGGTGCTCAAGGTGGTGTGAGCATACACTATTTCTGATCCCACTTCAAACTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTTGCTAATACGGGCTGAAGCTAAAATATaGCTACTGGGACATTATCAG | + |
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Preference number: 2 (lower is better) Translates to: IQDYNKYMPLSAQLLLIRAEAKI*LLGHYQ Trigger: CTGATAATGTCCCAGTAGCCATATTTTAGCTTCAGC...CCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGTAAATCTAGAATTCTTGAGCTTCATAGCTCTTCAGTTGTGCTTACAATTTGTGGAAACTGTCTaGTCCTTGAATGCATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PAVNLEFLSFIALQLCLQFVETV*SLNACF Trigger: AAAACATGCATTCAAGGACCAGACAGTTTCCACAAA...TTGTAAGCACAACTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTACAGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 72 bp | TGTACGAGGCCTACAGACAGGCTCTTCTCACTGAGTTaGAAAACCGCAAGCAGAGGCAGCAGTGGTATGCCC | + |
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Preference number: 3 (lower is better) Translates to: CTRPTDRLFSLS*KTASRGSSGMP Trigger: GGGCATACCACTGCTGCCTCTGCTTGCGGTTTTCCAACTCAGTGAGAAGAGCCTGTCTGTAGGCCTCGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTATGCTCACACCACCTaGAGCACCCAGTCTTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKYAHTT*STQSCL Trigger: AAGACAAGACTGGGTGCTCAAGGTGGTGTGAGCATA...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR GCA 72 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTaGCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACG | + |
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Preference number: 3 (lower is better) Translates to: ETQHRLPDHIEY*LPSGWAKLPKT Trigger: CGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 72 bp | CCGCAAGCAGAGGCAGCAGTGGTATGCCCAGCAGCATaGCAAGACGTTCTTAAGTTAACTTATCACAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PQAEAAVVCPAA*QDVLKLTYHKP Trigger: TGGCTTGTGATAAGTTAACTTAAGAACGTCTTGCCATGCTGCTGGGCATACCACTGCTGCCTCTGCTTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | TTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTCAGGGCCATCACAAGTaGAAAGACAGCTTGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: FMKELEQIVKLYEAYRQAQGHHK*KDSLSC Trigger: GCAGCTCAAGCTGTCTTTCAACTTGTGATGGCCCTG...AGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCACCCAGTCTTGTCTaGAAATGGTATCAGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWAPSLV*KWYQKE Trigger: TTCTTTCTGATACCATTTCAAGACAAGACTGGGTGC...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATCGGAGAAACCCTGTCTaGAACCACCACCGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: HKPIMKREAEAKIWLLGHRRNPV*NHHRPH Trigger: GTGGGGGCGGTGGTGGTTCAAGACAGGGTTTCTCCG...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGAAGTTGAAAGACAGCTaGAGCTGCATAGTAAAATCT | + |
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Preference number: 3 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKKLKDS*SCIVKS Trigger: AGATTTTACTATGCAGCTCAAGCTGTCTTTCAACTT...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGGTAAATCTAGAATTCTaGAGCTTCATAGCTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKVNLEF*SFIALQ Trigger: CTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTAC...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR TCA 72 bp | TGGACACACCCTTCTTGTTTAGGAAACAGAAGAGGATaGGAGTACATCTGTGATCAGTTGCTACGTGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: WTHPSCLGNRRG*EYICDQLLRVV Trigger: CACCACACGTAGCAACTGATCACAGATGTACTCTCATCCTCTTCTGTTTCCTAAACAAGAAGGGTGTGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAAGTTGAAAGACAGCTTGAGCAAGCACTTTGCATGTTaGCATGGAAACAAAAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: VSNLGGGQGHHKLKDSLSKHFAC*HGNKSF Trigger: AAAGCTTTTGTTTCCATGCAAACATGCAAAGTGCTT...GCTCAAGCTGTCTTTCAACTTGTGATGGCCCTGCCCACCTCCCAAATTAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR GCA 72 bp | TTTCTGTTCACCATTTCTGAGACAGTTAAAAATGTCTaGTTGGGCTCCCGGGTAGATGAGGCATTACCATTC | + |
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Preference number: 3 (lower is better) Translates to: FLFTISETVKNV*LGSRVDEALPF Trigger: GAATGGTAATGCCTCATCTACCCGGGAGCCCAAGCAGACATTTTTAACTGTCTCAGAAATGGTGAACAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR GCA 72 bp | GAAACAGAAGAGGATGAGAGTACATCTGTGATCAGTTaGTACGTGTGGTGTCAAGTGTTTTCTGGAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: ETEEDESTSVIS*YVWCQVFSGMR Trigger: TCTCATTCCAGAAAACACTTGACACCACACGTAGCAACTGATCACAGATGTACTCTCATCCTCTTCTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR TCA 72 bp | TTGTTTAGGAAACAGAAGAGGATGAGAGTACATCTGTaGTCAGTTGCTACGTGTGGTGTCAAGTGTTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LFRKQKRMRVHL*SVATCGVKCFL Trigger: CAGAAAACACTTGACACCACACGTAGCAACTGATCACAGATGTACTCTCATCCTCTTCTGTTTCCTAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 72 bp | TGGCATATGCTACCAAATGCTGTATTAGGAAACTGCTaGAGACTCTGGACAAAAAGTAGTACAGGAAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: WHMLPNAVLGNC*RLWTKSSTGRD Trigger: ATCTCTTCCTGTACTACTTTTTGTCCAGAGTCTCCAGCAGTTTCCTAATACAGCATTTGGTAGCATATGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR TCA 72 bp | TCAGTTGCTACGTGTGGTGTCAAGTGTTTTCTGGAATaGGATGGTTTGACTATTACCATAGGTATAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SVATCGVKCFLE*DGLTITIGIVQ Trigger: TTGAACTATACCTATGGTAATAGTCAAACCATCTCATTCCAGAAAACACTTGACACCACACGTAGCAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CCA 72 bp | ACAAAAAGAAATATAGACTCCCTGGTTTACATGAACTaGAAGGATGCTACAGGTAGCAACATGTTTCTAATT | + |
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Preference number: 3 (lower is better) Translates to: TKRNIDSLVYMN*KDATGSNMFLI Trigger: AATTAGAAACATGTTGCTACCTGTAGCATCCTTCCAGTTCATGTAAACCAGGGAGTCTATATTTCTTTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR TCA 90 bp | GATGCTACAGGTAGCAACATGTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAGCAGGTAACGCCGGCTaGACTCTTCCCCGCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: DATGSNMFLIWEVGRAITAGNAG*TLPRPS Trigger: AGATGGGCGGGGAAGAGTTCAGCCGGCGTTACCTGC...TGTGATGGCCCTGCCCACCTCCCAAATTAGAAACATGTTGCTACCTGTAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR GCA 90 bp | ATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGCTGGTCCCACAAAGCTaGAGCTACCTGGTCGATTAC | + |
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Preference number: 4 (lower is better) Translates to: ILKWELFQLADLDTYQGMLVPQS*SYLVDY Trigger: GTAATCGACCAGGTAGCTGCAGCTTTGTGGGACCAG...CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| 3UTR CAA 72 bp | TTGTACGAGGCCTACAGACAGGCTCTTCTCACTGAGTaGGAAAACCGCAAGCAGAGGCAGCAGTGGTATGCC | + |
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Preference number: 4 (lower is better) Translates to: LYEAYRQALLTE*ENRKQRQQWYA Trigger: GGCATACCACTGCTGCCTCTGCTTGCGGTTTTCCAACTCAGTGAGAAGAGCCTGTCTGTAGGCCTCGTACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR TCA 90 bp | ATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGAGTGGATGTGCTTCCTaGCGTTCTGCAGCTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ILKWELFQLADLDTYQGMSGCAS*RSAALH Trigger: ATGAAGAGCTGCAGAACGTCAGGAAGCACATCCACT...CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR GCA 90 bp | GACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACACCTGGGACAGAAGGATaGGGTTCAGCGCAGCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: DHIEYCLPSGWAKLPKTTPGTEG*GSAQPR Trigger: ACGAGGCTGCGCTGAACCGCATCCTTCTGTCCCAGG...TGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR TCA 90 bp | AAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACCCACCTCCTTGTCTCTaGCGGCCTGGGACAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLFMKELEQIVKLYEAYPPPCL*RPGTEG Trigger: TCCTTCTGTCCCAGGCCGTCAGAGACAAGGAGGTGG...GTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGAGCAGGAAATGTTGGTaGAGCAGGAGTGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKSRKCW*SRSGCA Trigger: AGCACATCCACTCCTGCTTCACCAACATTTCCTGCT...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGCAGGTGTCTGTGGGTTaGTGCTGCACTGTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWQVSVG*CCTVKL Trigger: AAGCTTTACAGTGCAGCAGCAACCCACAGACACCTG...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAAGTTGAAAGACAGCTTGAGCTTGTTGAGTAGGCTCTaGCTTGGGTGCAGGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSNLGGGQGHHKLKDSLSLLSRL*LGCRES Trigger: GCTTTCCCTGCACCCAAGTCAGAGCCTACTCAACAA...GCTCAAGCTGTCTTTCAACTTGTGATGGCCCTGCCCACCTCCCAAATTAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | TTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTTTGTCTCTGACGGCCTaGGACAGAAGGATGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMKELEQIVKLYEAYRQALSLTA*DRRMRF Trigger: GAACCGCATCCTTCTGTCCCAGGCCGTCAGAGACAA...AGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGGTTTTTCCAAGAACTTaGCGCCACCATCAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKVFPRT*RHHQLH Trigger: ATGGAGCTGATGGTGGCGCCAAGTTCTTGGAAAAAC...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | AGTGCGCAACTGTTGCTAATACGGCTTCCTTCCTTTGAGGCAGAGCACATAAGTTGCAGGTGCTTGCTTTaGAGGTCGTTAGGGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAQLLLIRLPSFEAEHISCRCLL*RSLGAK Trigger: TTTGGCCCCTAACGACCTGCAAAGCAAGCACCTGCA...ACTTATGTGCTCTGCCTCAAAGGAAGGAAGCCGTATTAGCAACAGTTGCGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | GACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACATGCAGCTCTTCATGCTaGTTCCCTGAGACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHIEYCLPSGWAKLPKTTCSSSC*FPETLR Trigger: CCTCAAGGTCTCAGGGAACCAGCATGAAGAGCTGCA...TGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAAGCAGGAGTGGATGTaGTTCCTGACGTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLFMKELEQIVKLYEAYKQEWM*FLTFCS Trigger: GCTGCAGAACGTCAGGAAGCACATCCACTCCTGCTT...GTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | GATGCTACAGGTAGCAACATGTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAAACATGGACTTGGGATaGGGCAATTCTTCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DATGSNMFLIWEVGRAITNMDLG*GNSSPW Trigger: CCAAGGTGAAGAATTGCCGCATCCCAAGTCCATGTT...TGTGATGGCCCTGCCCACCTCCCAAATTAGAAACATGTTGCTACCTGTAGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | GTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAAGTTGAAAGACAGCTTGAGCATAACGCCTCATTTGTaGTTCCCTGGTCCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSNLGGGQGHHKLKDSLSITPHL*FPGPTK Trigger: CTTTGTGGGACCAGGGAAGCACAAATGAGGCGTTAT...GCTCAAGCTGTCTTTCAACTTGTGATGGCCCTGCCCACCTCCCAAATTAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | GATGCTACAGGTAGCAACATGTTTCTAATTTGGGAGGTGGGCAGGGCCATCACACCTGTAACATGGACTTaGGATGCGGCAATTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DATGSNMFLIWEVGRAITPVTWT*DAAILH Trigger: GTGAAGAATTGCCGCATCCCAAGTCCATGTTACAGG...TGTGATGGCCCTGCCCACCTCCCAAATTAGAAACATGTTGCTACCTGTAGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | TTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTCTGTGGCCTGTAACATaGACTTGGGATGCGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FMKELEQIVKLYEAYRQALWPVT*TWDAAI Trigger: AATTGCCGCATCCCAAGTCCATGTTACAGGCCACAG...AGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | TGGGACATTATCAGGGGAAGAGAATTAGTGCGCATACGGCCAGCTGTCTGTAAATCATTTGTGCTTCCCTaGTCCCACAAAGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDIIRGRELVRIRPAVCKSFVLP*SHKAAA Trigger: AGCTGCAGCTTTGTGGGACCAGGGAAGCACAAATGA...TTTACAGACAGCTGGCCGTATGCGCACTAATTCTCTTCCCCTGATAATGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCTAATTTGGGAGGTGGGCAGGGCCATCACAAGTTGAAAGACAGCTTGAGCACTTTTAAGCCAGGATaGGGTAGGAGAAAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSNLGGGQGHHKLKDSLSTFKPG*GRRKQE Trigger: TTCCTGCTTTCTCCTACCTCATCCTGGCTTAAAAGT...GCTCAAGCTGTCTTTCAACTTGTGATGGCCCTGCCCACCTCCCAAATTAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | GACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACATACTCAGTGAAAAGCTaGAGGTGCTGGAGATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DHIEYCLPSGWAKLPKTTYSVKS*RCWRSS Trigger: GGATGATCTCCAGCACCTGCAGCTTTTCACTGAGTA...TGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | AGTGCGCAACTGTTGCTAATACGGCTTCCTTCCTTTGAGGCAGAGCACATAAGTTGGAGATCATCCTCCTaGACATTCTGGGACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAQLLLIRLPSFEAEHISWRSSS*TFWDKL Trigger: CAACTTGTCCCAGAATGTCCAGGAGGATGATCTCCA...ACTTATGTGCTCTGCCTCAAAGGAAGGAAGCCGTATTAGCAACAGTTGCGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | GTACCAGGGAATGCTGAAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAATTGGTGAAGCAGGAGTaGATGTGCTTCCTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPGNAEVALHEGTGADCELVKQE*MCFLTF Trigger: GAACGTCAGGAAGCACATCCACTCCTGCTTCACCAA...TTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTTCAGCATTCCCTGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | TTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTACATGTACCGCAACATaGAGTCCATCAGGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FMKELEQIVKLYEAYRQATCTAT*SPSGRI Trigger: AATCCTTCCTGATGGACTTCATGTTGCGGTACATGT...AGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGGCAATTCTTCACCTTaGTATATCTTTATGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWGNSSP*YIFMYA Trigger: GGCATACATAAAGATATACCAAGGTGAAGAATTGCC...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATTTGACGATGAGGACCTaGACAGGCCCTGCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKPIMKREAEAKIWLLGHLTMRT*TGPAFL Trigger: GAGAAAGGCAGGGCCTGTCCAGGTCCTCATCGTCAA...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | GACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACAACTTCACTCCATATCTaGATTCCTGTGGTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DHIEYCLPSGWAKLPKTTTSLHI*IPVVSR Trigger: ACGAGAAACCACAGGAATCCAGATATGGAGTGAAGT...TGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | TTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTGTTAGGGGCCAAAAATaGTTTATCACCACCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FMKELEQIVKLYEAYRQAVRGQK*FITTTN Trigger: GTTTGTGGTGGTGATAAACCATTTTTGGCCCCTAAC...AGCCTGTCTGTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| 3UTR CAA 72 bp | CTGTTCACCATTTCTGAGACAGTTAAAAATGTCTGCTaGGGCTCCCGGGTAGATGAGGCATTACCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTISETVKNVC*GSRVDEALPFF Trigger: GAAGAATGGTAATGCCTCATCTACCCGGGAGCCCAAGCAGACATTTTTAACTGTCTCAGAAATGGTGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | GACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTGCCAAAAACGACAGTTGTAGACCTGTATTaGGCTTATCATTGTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DHIEYCLPSGWAKLPKTTVVDLY*AYHCAK Trigger: CTTAGCACAATGATAAGCTCAATACAGGTCTACAAC...TGTCGTTTTTGGCAACTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACCAATCAACAGATTCCTaGTTGTACATGTACCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLLFMKELEQIVKLYEAYQSTDS*LYMYRN Trigger: GTTGCGGTACATGTACAACCAGGAATCTGTTGATTG...GTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| 3UTR CAA 72 bp | GAAGTGGGATCAGAAATAGTGTATGCTCACACCACCTaGAGCACCCAGTCTTGTCTTGAAATGGTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVGSEIVYAHTT*STQSCLEMVSE Trigger: TTCTGATACCATTTCAAGACAAGACTGGGTGCTCAAGGTGGTGTGAGCATACACTATTTCTGATCCCACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| 3UTR CAA 72 bp | GACTATAATAAATACATGCCTCTTAGTGCGCAACTGTaGCTAATACGGCTTCCTTCCTTTGAGGCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DYNKYMPLSAQL*LIRLPSFEAEH Trigger: GTGCTCTGCCTCAAAGGAAGGAAGCCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | ATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTTGCTAATACGGCGATCCACCCCTCCATaGAAATCCAGTCAATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQDYNKYMPLSAQLLLIRRSTPP*KSSQWF Trigger: GAACCATTGACTGGATTTTCATGGAGGGGTGGATCG...CCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | GTACCAGGGAATGCTGAAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAACCATCAGCTCCATATaGAAATTCGTATGGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VPGNAEVALHEGTGADCETISSI*KFVWET Trigger: AGTTTCCCATACGAATTTTCATATGGAGCTGATGGT...TTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTTCAGCATTCCCTGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | ATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTTGCTAATACGGAAAAGCTGCAGGTGCTaGAGATCATCCTCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IQDYNKYMPLSAQLLLIRKSCRC*RSSSWT Trigger: TGTCCAGGAGGATGATCTCCAGCACCTGCAGCTTTT...CCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGGACTCAGGAGCCATaGAATCAGTATTTTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLLFMKELEQIVKLYEAYRTQEP*NQYFQV Trigger: AACTTGAAAATACTGATTCCATGGCTCCTGAGTCCT...GTAGGCCTCGTACAACTTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATGTGTCTGTGGGTTGCTaGTGCACTGTAAAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HKPIMKREAEAKIWLLGHVSVGC*CTVKLV Trigger: TACAAGCTTTACAGTGCAGCAGCAACCCACAGACAC...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTAAAATATGGCTACTGGGACATTATCAGGGGAAGAGAATTAGTGCGCATATCTAACTCAAAGGAATaGTCGTCCTTGACGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKYGYWDIIRGRELVRISNSKE*SSLTMR Trigger: CCTCATCGTCAAGGACGACCATTCCTTTGAGTTAGA...TATGCGCACTAATTCTCTTCCCCTGATAATGTCCCAGTAGCCATATTTTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR TCA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATCGAATCTCTCAAAGTTaGCTGACTGTCAAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKPIMKREAEAKIWLLGHRISQS*LTVKGS Trigger: GGAACCTTTGACAGTCAGTCAACTTTGAGAGATTCG...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR GCA 90 bp | ATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTTGCTAATACGGGATTCTTCTTTTAGCTaGAGGTGCTTGCTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQDYNKYMPLSAQLLLIRDSSFS*RCLLCR Trigger: CCTGCAAAGCAAGCACCTGCAGCTAAAAGAAGAATC...CCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGTAAATCTAGAATTCTTGAGCTTCATAGCTCTTCAGTTGTGCTTACAATGTTGTATGTGTCCTTaGCAGTTGCAACAGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PAVNLEFLSFIALQLCLQCCMCP*QLQQLL Trigger: TAGCAGCTGTTGCAACTGCCAAGGACACATACAACA...TTGTAAGCACAACTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTACAGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| 3UTR CAA 72 bp | AAACTTATGGAACTTCCAGCTGTAAATCTAGAATTCTaGAGCTTCATAGCTCTTCAGTTGTGCTTACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLMELPAVNLEF*SFIALQLCLQM Trigger: CATTTGTAAGCACAACTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTACAGCTGGAAGTTCCATAAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS CCA 90 bp | GCTCCAGCAACAGACACAGCAACCACCTCCTTGTCTCTGACGGCCTaGGACAGAAGGATGCGGTTCAGCGCAGCCTCGTCTAACTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: APATDTATTSLSLTA*DRRMRFSAASSNSK Trigger: CTTTGAGTTAGACGAGGCTGCGCTGAACCGCATCCTTCTGTCCCAGGCCGTCAGAGACAAGGAGGTGGTTGCTGTGTCTGTTGCTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
||
| CDS CCA 90 bp | GCCTCGTCTAACTCAAAGGAATGGTCGTCCTTGACGATGAGGACCTaGACAGGCCCTGCCTTTCTCACTGGCTCCTCCTCTTCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSNSKEWSSLTMRT*TGPAFLTGSSSSEL Trigger: GAGCTCAGAAGAGGAGGAGCCAGTGAGAAAGGCAGGGCCTGTCCAGGTCCTCATCGTCAAGGACGACCATTCCTTTGAGTTAGACGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGACAGGTGTCTGTGGGTaGCTGCTGCACTGTAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILKWELFQLADLDTYQGMTGVCG*LLHCKA Trigger: AGCTTTACAGTGCAGCAGCAACCCACAGACACCTGT...CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CAA 90 bp | CAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGCTAAGTTTAGCTGCAGGTGCTaGCTTTGCAGGTCGTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QHRLPDHIEYCLPSGWAKFSCRC*LCRSLG Trigger: CCCTAACGACCTGCAAAGCAAGCACCTGCAGCTAAA...CTTAGCCCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS GCA 90 bp | GATTACAGCACCCAGCTCTCGATATTCGCCAGAGTAGCGGATATATaGCCAGGTGCAGAGGGTGATAAGCGTCAGTCCCATGATCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: DYSTQLSIFARVADI*PGAEGDKRQSHDHV Trigger: AACATGATCATGGGACTGACGCTTATCACCCTCTGCACCTGGGCATATATCCGCTACTCTGGCGAATATCGAGAGCTGGGTGCTGTAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CAA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGGGAATGTTTCTTCCATaGCCAACCTGCCATACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWGMFLP*PTCHTQ Trigger: CTGAGTATGGCAGGTTGGCAATGGAAGAAACATTCC...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CAA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGAGAAAGCAGGAAATGTaGGTGAAGCAGGAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWRKQEM*VKQEWM Trigger: CATCCACTCCTGCTTCACCAACATTTCCTGCTTTCT...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
||
| CDS-3UTR CAA 90 bp | GAGACACAGCACAGGCTTCCTGACCACATAGAATACTGCCTTCCATCAGGGTGGAGTCCCATGATCATGTaGCACAGGCTAGCTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: ETQHRLPDHIEYCLPSGWSPMIM*HRLAMM Trigger: CATCATAGCTAGCCTGTGCAACATGATCATGGGACT...CCACCCTGATGGAAGGCAGTATTCTATGTGGTCAGGAAGCCTGTGCTGTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | GTACCAGGGAATGCTGAAGTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGGGTGCAGGGAAAGCTaGGTGACACAGGTGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: VPGNAEVALHEGTGADCEGCRES*VTQVSV Trigger: CACAGACACCTGTGTCACCAAGCTTTCCCTGCACCC...TTCACAATCTGCTCCAGTTCCTTCATGAAGAGCAACTTCAGCATTCCCTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | ATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGCGGCAATTCTTCACCTaGGTATATCTTTATGTATGC | + |
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Preference number: 5 (lower is better) Translates to: ILKWELFQLADLDTYQGMRQFFT*VYLYVC Trigger: GCATACATAAAGATATACCAAGGTGAAGAATTGCCG...CATTCCCTGGTACGTGTCCAGGTCAGCCAGCTGGAAGAGCTCCCACTTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | AGTGCGCAACTGTTGCTAATACGGCTTCCTTCCTTTGAGGCAGAGCACATAAGTGCCTGTAACATGGACTaGGGATGCGGCAATTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SAQLLLIRLPSFEAEHISACNMD*GCGNSS Trigger: TGAAGAATTGCCGCATCCCAAGTCCATGTTACAGGC...ACTTATGTGCTCTGCCTCAAAGGAAGGAAGCCGTATTAGCAACAGTTGCGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | TGGGACATTATCAGGGGAAGAGAATTAGTGCGCATACGGCCAGCTGTCTGTAAACCGAATCTCTCAAAGTaGACTGACTGTCAAAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: WDIIRGRELVRIRPAVCKPNLSK*TDCQRF Trigger: GAACCTTTGACAGTCAGTCAACTTTGAGAGATTCGG...TTTACAGACAGCTGGCCGTATGCGCACTAATTCTCTTCCCCTGATAATGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | CCAGCTGTAAATCTAGAATTCTTGAGCTTCATAGCTCTTCAGTTGTGCTTACAAAAGGAATGGTCGTCCTaGACGATGAGGACCTGGACA | + |
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Preference number: 5 (lower is better) Translates to: PAVNLEFLSFIALQLCLQKEWSS*TMRTWT Trigger: TGTCCAGGTCCTCATCGTCAAGGACGACCATTCCTT...TTGTAAGCACAACTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTACAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | ATACAGGACTATAATAAATACATGCCTCTTAGTGCGCAACTGTTGCTAATACGGCGTTTTTCCAAGAACTaGGCGCCACCATCAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: IQDYNKYMPLSAQLLLIRRFSKN*APPSAP Trigger: TGGAGCTGATGGTGGCGCCAAGTTCTTGGAAAAACG...CCGTATTAGCAACAGTTGCGCACTAAGAGGCATGTATTTATTATAGTCCTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | AAGCTAAAATATGGCTACTGGGACATTATCAGGGGAAGAGAATTAGTGCGCATAGCAACAGCTGCTAAATaGTTAGCTTCTGCTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KLKYGYWDIIRGRELVRIATAAK*LASAVA Trigger: GGCCACAGCAGAAGCTAACAATTTAGCAGCTGTTGC...TATGCGCACTAATTCTCTTCCCCTGATAATGTCCCAGTAGCCATATTTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | CCAGCTGTAAATCTAGAATTCTTGAGCTTCATAGCTCTTCAGTTGTGCTTACAACTGAGCTCCAGTCACTaGACTTCTCTGAAAACCCAC | + |
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Preference number: 5 (lower is better) Translates to: PAVNLEFLSFIALQLCLQLSSSH*TSLKTH Trigger: GTGGGTTTTCAGAGAAGTCAAGTGACTGGAGCTCAG...TTGTAAGCACAACTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTACAGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | CCAGCTGTAAATCTAGAATTCTTGAGCTTCATAGCTCTTCAGTTGTGCTTACAATGGTTCCCTGAGACCTaGAGGCGTTTTTCCAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: PAVNLEFLSFIALQLCLQWFPET*RRFSKN Trigger: GTTCTTGGAAAAACGCCTCAAGGTCTCAGGGAACCA...TTGTAAGCACAACTGAAGAGCTATGAAGCTCAAGAATTCTAGATTTACAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATTGTATAACGCCTCATTaGTGCTTCCCTGGTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: HKPIMKREAEAKIWLLGHCITPH*CFPGPT Trigger: TGTGGGACCAGGGAAGCACAAATGAGGCGTTATACA...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS-3UTR CAA 90 bp | CACAAGCCTATAATGAAAAGAGAAGCTGAAGCTAAAATATGGCTACTGGGACATCCATCAAAGTTTGGGTaGGTAGCGACTTTTAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: HKPIMKREAEAKIWLLGHPSKFG*VATFKP Trigger: TGGCTTAAAAGTCGCTACCAACCCAAACTTTGATGG...ATGTCCCAGTAGCCATATTTTAGCTTCAGCTTCTCTTTTCATTATAGGCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS TCA 72 bp | CTCCAGCAACAGACACAGCAACCACCTCCTTGTCTCTaGCGGCCTGGGACAGAAGGATGCGGTTCAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LQQQTQQPPPCL*RPGTEGCGSAQ Trigger: CTGCGCTGAACCGCATCCTTCTGTCCCAGGCCGTCAGAGACAAGGAGGTGGTTGCTGTGTCTGTTGCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
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| CDS CCA 72 bp | ACAGACACAGCAACCACCTCCTTGTCTCTGACGGCCTaGGACAGAAGGATGCGGTTCAGCGCAGCCTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: TDTATTSLSLTA*DRRMRFSAASS Trigger: AGACGAGGCTGCGCTGAACCGCATCCTTCTGTCCCAGGCCGTCAGAGACAAGGAGGTGGTTGCTGTGTCTGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
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| CDS CAA 90 bp | ATGCGGTTCAGCGCAGCCTCGTCTAACTCAAAGGAATGGTCGTCCTaGACGATGAGGACCTGGACAGGCCCTGCCTTTCTCACTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: MRFSAASSNSKEWSS*TMRTWTGPAFLTGS Trigger: GGAGCCAGTGAGAAAGGCAGGGCCTGTCCAGGTCCTCATCGTCAAGGACGACCATTCCTTTGAGTTAGACGAGGCTGCGCTGAACCGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
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| CDS CAA 90 bp | TTCCCTTTTCTAAAGGCTCCAGCAACAGACACAGCAACCACCTCCTaGTCTCTGACGGCCTGGGACAGAAGGATGCGGTTCAGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FPFLKAPATDTATTS*SLTAWDRRMRFSAA Trigger: GGCTGCGCTGAACCGCATCCTTCTGTCCCAGGCCGTCAGAGACAAGGAGGTGGTTGCTGTGTCTGTTGCTGGAGCCTTTAGAAAAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
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| CDS CAA 72 bp | AGCGCAGCCTCGTCTAACTCAAAGGAATGGTCGTCCTaGACGATGAGGACCTGGACAGGCCCTGCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAASSNSKEWSS*TMRTWTGPAFL Trigger: GAGAAAGGCAGGGCCTGTCCAGGTCCTCATCGTCAAGGACGACCATTCCTTTGAGTTAGACGAGGCTGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
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| CDS CCA 72 bp | AACTCAAAGGAATGGTCGTCCTTGACGATGAGGACCTaGACAGGCCCTGCCTTTCTCACTGGCTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSKEWSSLTMRT*TGPAFLTGSSS Trigger: AGAGGAGGAGCCAGTGAGAAAGGCAGGGCCTGTCCAGGTCCTCATCGTCAAGGACGACCATTCCTTTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021466.10 ENSMUST00000223456.2 |
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| CDS CAA 90 bp | CTGACTTGGGTGCAGGGAAAGCTTGGTGACACAGGTGTCTGTGGGTaGCTGCTGCACTGTAAAGCTTGTATAACGCCTCATTTGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LTWVQGKLGDTGVCG*LLHCKACITPHLCF Trigger: GAAGCACAAATGAGGCGTTATACAAGCTTTACAGTGCAGCAGCAACCCACAGACACCTGTGTCACCAAGCTTTCCCTGCACCCAAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS CAA 72 bp | GTGCAGGGAAAGCTTGGTGACACAGGTGTCTGTGGGTaGCTGCTGCACTGTAAAGCTTGTATAACGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VQGKLGDTGVCG*LLHCKACITPH Trigger: ATGAGGCGTTATACAAGCTTTACAGTGCAGCAGCAACCCACAGACACCTGTGTCACCAAGCTTTCCCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS CAA 90 bp | GCCTTGAAGTACTCCAGCAGGCCTCGGCAGGTGATTTTATTCCCATaGATCTCTTTAATATCTAGACGCTCAGGACTCAGGAGCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: ALKYSSRPRQVILFP*ISLISRRSGLRSHG Trigger: TCCATGGCTCCTGAGTCCTGAGCGTCTAGATATTAAAGAGATCAATGGGAATAAAATCACCTGCCGAGGCCTGCTGGAGTACTTCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS CAA 90 bp | TATGCCCAGGTGCAGAGGGTGATAAGCGTCAGTCCCATGATCATGTaGCACAGGCTAGCTATGATGTCCAAACCAATGAATCCAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: YAQVQRVISVSPMIM*HRLAMMSKPMNPVT Trigger: TGTGACTGGATTCATTGGTTTGGACATCATAGCTAGCCTGTGCAACATGATCATGGGACTGACGCTTATCACCCTCTGCACCTGGGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS GCA 72 bp | ACGCCTCGGAATAACTTCACAGATTCTTCTTTTAGCTaGAGGTGCTTGCTTTGCAGGTCGTTAGGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TPRNNFTDSSFS*RCLLCRSLGAK Trigger: TTTGGCCCCTAACGACCTGCAAAGCAAGCACCTGCAGCTAAAAGAAGAATCTGTGAAGTTATTCCGAGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS CAA 72 bp | TGGTTCCCTGAGACCTTGAGGCGTTTTTCCAAGAACTaGGCGCCACCATCAGCTCCATATGAAAATTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: WFPETLRRFSKN*APPSAPYENSY Trigger: ATACGAATTTTCATATGGAGCTGATGGTGGCGCCAAGTTCTTGGAAAAACGCCTCAAGGTCTCAGGGAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS CAA 72 bp | GTGCAGAGGGTGATAAGCGTCAGTCCCATGATCATGTaGCACAGGCTAGCTATGATGTCCAAACCAATGAAT | + |
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Preference number: 6 (lower is better) Translates to: VQRVISVSPMIM*HRLAMMSKPMN Trigger: ATTCATTGGTTTGGACATCATAGCTAGCCTGTGCAACATGATCATGGGACTGACGCTTATCACCCTCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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| CDS TCA 72 bp | TCAAAGTTTGGGTTGGTAGCGACTTTTAAGCCAGGATaGGGTAGGAGAAAGCAGGAAATGTTGGTGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SKFGLVATFKPG*GRRKQEMLVKQ Trigger: CTGCTTCACCAACATTTCCTGCTTTCTCCTACCTCATCCTGGCTTAAAAGTCGCTACCAACCCAAACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021466.10 |
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