Pregenerated sensors for ATIC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026192Ensembl transcript IDs: ENSMUST00000027384.6
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTTACCTGCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTaGCTCCAGGAGGGAGAGATGCTTTCAGGTTTTGCAGAAACAAGC | + |
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Preference number: 1 (lower is better) Translates to: WLPALRCLTGTFPES*LQEGEMLSGFAETS Trigger: GCTTGTTTCTGCAAAACCTGAAAGCATCTCTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGCAGGTAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGCCACAAGTTAATATCTaGTCACTTTGGGTGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VELCEFQISLSYKFQDSRPQVNI*SLWVKS Trigger: GCTTTTCACCCAAAGTGAGCAGATATTAACTTGTGG...CCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| 3UTR-3UTR CCA 90 bp | TATCTGCTCACTTTGGGTGAAAAGCTCTATGCAGAACGCCAGTCCATTTATAAGCAGCGTGGCTTCTCCTaGTTACCTGCACTTAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: YLLTLGEKLYAERQSIYKQRGFS*LPALRC Trigger: ACACCTAAGTGCAGGTAACCAGGAGAAGCCACGCTG...CTTATAAATGGACTGGCGTTCTGCATAGAGCTTTTCACCCAAAGTGAGCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| 3UTR-3UTR GCA 90 bp | GTGAACAGTGAGGACTATAACCACAGGGACATAGATCCAGTTATGTCCTGCCTGGATGCTTTCAGGTTTTaGAGAAACAAGCCTCACATA | + |
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Preference number: 2 (lower is better) Translates to: VNSEDYNHRDIDPVMSCLDAFRF*RNKPHI Trigger: TATGTGAGGCTTGTTTCTGCAAAACCTGAAAGCATC...CAGGCAGGACATAACTGGATCTATGTCCCTGTGGTTATAGTCCTCACTGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| 3UTR-3UTR GCA 90 bp | TCTATGCAGAACGCCAGTCCATTTATAAGTTTATACCAAACAGGAATACTAAGTTCCAGGAGGGAGAGATaGTTTCAGGTTTTGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SMQNASPFISLYQTGILSSRRER*FQVLQK Trigger: TTTCTGCAAAACCTGAAAGCATCTCTCCCTCCTGGA...ACTTAGTATTCCTGTTTGGTATAAACTTATAAATGGACTGGCGTTCTGCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| 3UTR CCA 72 bp | GCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTaGCTCCAGGAGGGAGAGATGCTTTCAGGTTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: ALRCLTGTFPES*LQEGEMLSGFA Trigger: TGCAAAACCTGAAAGCATCTCTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| 3UTR GCA 72 bp | AAGCTGGCTCCAGGAGGGAGAGATGCTTTCAGGTTTTaGAGAAACAAGCCTCACATAAGGTGTCTTAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: KLAPGGRDAFRF*RNKPHIRCLRL Trigger: TAGCCTAAGACACCTTATGTGAGGCTTGTTTCTGCAAAACCTGAAAGCATCTCTCCCTCCTGGAGCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | CCCAGTTCCCAGGGGATAATGGGAAGCAAACAGTTAAGCTTCCGAGAGGCAGGACCAGGCCAGCATCCCTaGTCGCTTTTGCCGTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSSQGIMGSKQLSFREAGPGQHP*SLLPCL Trigger: GAGGCACGGCAAAAGCGATCAGGGATGCTGGCCTGG...TCCTGCCTCTCGGAAGCTTAACTGTTTGCTTCCCATTATCCCCTGGGAACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | GGGGTGGGGGTGGCATGTCATCATAAGGCAGCGTGGCTTCTCCTGGTTACCTGCATTGAGCGGTATGAGTaGATGCCTTCAAGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GVGVACHHKAAWLLLVTCIERYE*MPSRPS Trigger: ACTTGGCCTTGAAGGCATTCACTCATACCGCTCAAT...GCAGGTAACCAGGAGAAGCCACGCTGCCTTATGATGACATGCCACCCCCACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | GTGAACAGTGAGGACTATAACCACAGGGACATAGATCCAGTTATGTCCTGCCTGCAACGGCCAGGGGCGTaGGGGTCGGGTAGAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VNSEDYNHRDIDPVMSCLQRPGA*GSGRGH Trigger: ATGACCTCTACCCGACCCTCACGCCCCTGGCCGTTG...CAGGCAGGACATAACTGGATCTATGTCCCTGTGGTTATAGTCCTCACTGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | CCCAGTTCCCAGGGGATAATGGGAAGCAAACAGTTAAGCTTCCGAGAGGCAGGAATCCCTGATCGCTTTTaGCGTGCCTCCGGAAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: PSSQGIMGSKQLSFREAGIPDRF*RASGSD Trigger: GTCGCTTCCGGAGGCACGGCAAAAGCGATCAGGGAT...TCCTGCCTCTCGGAAGCTTAACTGTTTGCTTCCCATTATCCCCTGGGAACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | GTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGCCTGCCGGGCTGACGTaGTTGAAAGAAGCAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VELCEFQISLSYKFQDSRPAGLT*LKEAAA Trigger: AGCGGCTGCTTCTTTCAAGCACGTCAGCCCGGCAGG...CCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | GGGGTGGGGGTGGCATGTCATCATAAGGCAGCGTGGCTTCTCCTGGTTACCTGCGTTTGCCTTATCACCTaGAAGGCGAGTGCAGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: GVGVACHHKAAWLLLVTCVCLIT*KASAVY Trigger: ATACACTGCACTCGCCTTGCAGGTGATAAGGCAAAC...GCAGGTAACCAGGAGAAGCCACGCTGCCTTATGATGACATGCCACCCCCACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | CTGCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTGGCTCCAGGAGGGAGAGCACTCGTGGGTGGTaGCGAAGCCACCAAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LHLGVSQGLFLKAGSRRESTRGW*RSHQEF Trigger: AAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCT...CTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | CTGCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTGGCTCCAGGAGGGAGACTGTCACTCGAGCGTaGTTTTTGGCTGCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LHLGVSQGLFLKAGSRRETVTRA*FLAAAL Trigger: GAGAGCTGCAGCCAAAAACCACGCTCGAGTGACAGT...CTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | CAGGTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGCTCTGTCACCAGCTaGCAGGCGTTCAAAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: QVELCEFQISLSYKFQDSSSVTS*QAFKAS Trigger: TGACGCTTTGAACGCCTGGCAGCTGGTGACAGAGCT...GCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | GCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTGGCTCCAGGAGGGAGAGAAGCCACCAAGAGTTTaGCTTATCACCTGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ALRCLTGTFPESWLQEGEKPPRV*LITCKA Trigger: CGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTT...CTCTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | CCCAGTTCCCAGGGGATAATGGGAAGCAAACAGTTAAGCTTCCGAGAGGCAGGACGCATTGGAGATCTCTaGTCTCTTCACCCCGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PSSQGIMGSKQLSFREAGRIGDL*SLHPGF Trigger: AAAGCCGGGGTGAAGAGAGCAGAGATCTCCAATGCG...TCCTGCCTCTCGGAAGCTTAACTGTTTGCTTCCCATTATCCCCTGGGAACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | GCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTGGCTCCAGGAGGGAGAGTACCGCAAGGGCATCTaGGAAATTCCCTTACTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ALRCLTGTFPESWLQEGEYRKGI*EIPLLY Trigger: GTACAGTAAGGGAATTTCTCAGATGCCCTTGCGGTA...CTCTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | GTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGGGTCCACATTATCCCTaGAAGGAAAGAAGGCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VELCEFQISLSYKFQDSRGPHYP*KERRRR Trigger: CCGACGCCTTCTTTCCTTTCAGGGATAATGTGGACC...CCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TGGAGAAAGAAAGAGCAGTCCCAGCATTTAGATCTAGTTAAGGACCCAGTTCCCCCCAACAGCAGCACCTaGCGGGCTGACGTGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: WRKKEQSQHLDLVKDPVPPNSST*RADVLE Trigger: TTCAAGCACGTCAGCCCGGCAGGTGCTGCTGTTGGG...GGGAACTGGGTCCTTAACTAGATCTAAATGCTGGGACTGCTCTTTCTTTCTCCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | CAGGTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCCGTCTTCTGGAATGTTaGGTGCCAAGATCCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QVELCEFQISLSYKFQDSRLLEC*VPRSQH Trigger: ATGCTGGGATCTTGGCACGCAACATTCCAGAAGACG...GCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | AGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGAGCTACAGAGAAACCCCGCATAGTCCTCTaGTTCACAGACGACTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SSRSASVTSSRTAGATEKPRIVL*FTDDCH Trigger: GTGACAGTCGTCTGTGAACCAGAGGACTATGCGGGG...TTTCTCTGTAGCTCCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | CAGGTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCCACACCGAATTAGACTaGGTATACTTGACAGCGACG | + |
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Preference number: 4 (lower is better) Translates to: QVELCEFQISLSYKFQDSHTELD*VYLTAT Trigger: CGTCGCTGTCAAGTATACTCAGTCTAATTCGGTGTG...GCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCACCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TGGAGAAAGAAAGAGCAGTCCCAGCATTTAGATCTAGTTAAGGACCCAGTTCCCCCGAGACTGCTGTCCTaGTCCGATGCCAATAACCTG | + |
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Preference number: 4 (lower is better) Translates to: WRKKEQSQHLDLVKDPVPPRLLS*SDANNL Trigger: CAGGTTATTGGCATCGGAGCAGGACAGCAGTCTCGG...GGGAACTGGGTCCTTAACTAGATCTAAATGCTGGGACTGCTCTTTCTTTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | TATCTGCTCACTTTGGGTGAAAAGCTCTATGCAGAACGCCAGTCCATTTATAAGAGGCCAAGTGGCGCCTaGTCTCTAGGGAGGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YLLTLGEKLYAERQSIYKRPSGA*SLGRCP Trigger: AGGACACCTCCCTAGAGACCAGGCGCCACTTGGCCT...CTTATAAATGGACTGGCGTTCTGCATAGAGCTTTTCACCCAAAGTGAGCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | GGGGTGGGGGTGGCATGTCATCATAAGGCAGCGTGGCTTCTCCTGGTTACCTGCGATAATTTTTGCAGTTaGGACATCACAAATGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GVGVACHHKAAWLLLVTCDNFCS*DITNVR Trigger: TCTGACATTTGTGATGTCCCAACTGCAAAAATTATC...GCAGGTAACCAGGAGAAGCCACGCTGCCTTATGATGACATGCCACCCCCACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTTTGCAGAAACAAGCCTCACATAAGGTGTCTTAGGCTAGAAAGCTCTAGAGCCGTGCATCTCTaGAGCTACCCCCGCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: FRFCRNKPHIRCLRLESSRAVHL*SYPRIV Trigger: GACTATGCGGGGGTAGCTGCAGAGATGCACGGCTCT...AGAGCTTTCTAGCCTAAGACACCTTATGTGAGGCTTGTTTCTGCAAAACCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TGCAGAAACAAGCCTCACATAAGGTGTCTTAGGCTAGAAAGCTCTACCTTTCAGTCTTGCTCTTGCATATaGAACGGCCAGGGGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: CRNKPHIRCLRLESSTFQSCSCI*NGQGRE Trigger: CTCACGCCCCTGGCCGTTGCATATGCAAGAGCAAGA...CTGAAAGGTAGAGCTTTCTAGCCTAAGACACCTTATGTGAGGCTTGTTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | ACTTCCAAGACCCCACACATGATTATCTACGACCAGGAAACAATGTCAGCTAAGAGACACATCTCTGACTaGCAGGCCAGCATCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TSKTPHMIIYDQETMSAKRHISD*QASIPD Trigger: ATCAGGGATGCTGGCCTGGCAGTCAGAGATGTGTCT...CTTAGCTGACATTGTTTCCTGGTCGTAGATAATCATGTGTGGGGTCTTGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | CACATAAGGTGTCTTAGGCTAGAAAGCTCTACCTTTCAGATAAGTAAGACCCACCGCTGGGATGTCTACTaGTCCTCTCAGCTCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HIRCLRLESSTFQISKTHRWDVY*SSQLCH Trigger: GTGACAGAGCTGAGAGGAGCAGTAGACATCCCAGCG...GTGGGTCTTACTTATCTGAAAGGTAGAGCTTTCTAGCCTAAGACACCTTATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | CACATAAGGTGTCTTAGGCTAGAAAGCTCTACCTTTCAGATAAGTAAGACCCACGAGACGCGAGACTTCTaGCAAATTCCACGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HIRCLRLESSTFQISKTHETRDF*QIPRGQ Trigger: CTGGCCTCGTGGAATTTGCCAGAAGTCTCGCGTCTC...GTGGGTCTTACTTATCTGAAAGGTAGAGCTTTCTAGCCTAAGACACCTTATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | GTGGAACTCTGTGAGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGCAAGTTTATGAATCCTaGGGCTCCATTGAGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: VELCEFQISLSYKFQDSRQVYES*GSIENC Trigger: ACAGTTCTCAATGGAGCCCCAGGATTCATAAACTTG...CCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACTCACAGAGTTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | GCCAGTCCATTTATAAGTTTATACCAAACAGGAATACTAAGTAGCCAACAGAGGCATGGACAGCACTCGTaGGTGGTGCCGAAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ASPFISLYQTGILSSQQRHGQHS*VVPKPP Trigger: TGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATG...CCTCTGTTGGCTACTTAGTATTCCTGTTTGGTATAAACTTATAAATGGACTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TGGAGAAAGAAAGAGCAGTCCCAGCATTTAGATCTAGTTAAGGACCCAGTTCCCAATGAGGTCTCTGAGTaGAGACTCCGGCAGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: WRKKEQSQHLDLVKDPVPNEVSE*RLRQIF Trigger: AAAGATCTGCCGGAGTCTGCACTCAGAGACCTCATT...GGGAACTGGGTCCTTAACTAGATCTAAATGCTGGGACTGCTCTTTCTTTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | TCACTTTGGGTGAAAAGCTCTATGCAGAACGCCAGTCCATTTATAAGTTTATACCTCGTCCTCACTGAGTaGAACCCCAACAGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SLWVKSSMQNASPFISLYLVLTE*NPNSST Trigger: GGTGCTGCTGTTGGGGTTCCACTCAGTGAGGACGAG...GTATAAACTTATAAATGGACTGGCGTTCTGCATAGAGCTTTTCACCCAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TATCTGCTCACTTTGGGTGAAAAGCTCTATGCAGAACGCCAGTCCATTTATAAGTTCTGGAATGTTGCGTaGCAAGATCCCAGCATGGAC | + |
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Preference number: 4 (lower is better) Translates to: YLLTLGEKLYAERQSIYKFWNVA*QDPSMD Trigger: GTCCATGCTGGGATCTTGGCACGCAACATTCCAGAA...CTTATAAATGGACTGGCGTTCTGCATAGAGCTTTTCACCCAAAGTGAGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | GCCAGTCCATTTATAAGTTTATACCAAACAGGAATACTAAGTAGCCAACAGAGGAGCTCCTCTTGCTCTTaGATATGCAACGGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASPFISLYQTGILSSQQRSSSCS*ICNGQG Trigger: CCCCTGGCCGTTGCATATGCAAGAGCAAGAGGAGCT...CCTCTGTTGGCTACTTAGTATTCCTGTTTGGTATAAACTTATAAATGGACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | GCCAGTCCATTTATAAGTTTATACCAAACAGGAATACTAAGTAGCCAACAGAGGCAGTGTATCCGAGACTaGTGTCCTGCTCCGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: ASPFISLYQTGILSSQQRQCIRD*CPAPMP Trigger: TGGCATCGGAGCAGGACAGCAGTCTCGGATACACTG...CCTCTGTTGGCTACTTAGTATTCCTGTTTGGTATAAACTTATAAATGGACTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TCACTTTGGGTGAAAAGCTCTATGCAGAACGCCAGTCCATTTATAAGTTTATACCACCTGCAAGGCGAGTaGAGTGTATCCGAGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SLWVKSSMQNASPFISLYHLQGE*SVSETA Trigger: AGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTG...GTATAAACTTATAAATGGACTGGCGTTCTGCATAGAGCTTTTCACCCAAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | AGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGAGCTACAGAGAAAACTGATCAATCGCATTaGAGATCTCTGCTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SSRSASVTSSRTAGATEKTDQSH*RSLLSS Trigger: TGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGT...TTTCTCTGTAGCTCCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | GTGAACAGTGAGGACTATAACCACAGGGACATAGATCCAGTTATGTCCTGCCTGAACAAAATCACCAAATaGAGACATCCTATCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VNSEDYNHRDIDPVMSCLNKITK*RHPISS Trigger: GGAGCTGATAGGATGTCTTCATTTGGTGATTTTGTT...CAGGCAGGACATAACTGGATCTATGTCCCTGTGGTTATAGTCCTCACTGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TATCTGCTCACTTTGGGTGAAAAGCTCTATGCAGAACGCCAGTCCATTTATAAGAACCTCTTCGAACAGTaGTTCCCATTTCACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: YLLTLGEKLYAERQSIYKNLFEQ*FPFHQV Trigger: GACCTGGTGAAATGGGAAGCACTGTTCGAAGAGGTT...CTTATAAATGGACTGGCGTTCTGCATAGAGCTTTTCACCCAAAGTGAGCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR TCA 90 bp | TCTATGCAGAACGCCAGTCCATTTATAAGTTTATACCAAACAGGAATACTAAGTAACTGGGCAGGAGTCTaGTGGGGGTTCATCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: SMQNASPFISLYQTGILSNWAGV*WGFIPY Trigger: GTATGGGATGAACCCCCATCAGACTCCTGCCCAGTT...ACTTAGTATTCCTGTTTGGTATAAACTTATAAATGGACTGGCGTTCTGCATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR GCA 90 bp | TGGAGAAAGAAAGAGCAGTCCCAGCATTTAGATCTAGTTAAGGACCCAGTTCCCTCTGGAGATAATTTTTaGAGTTGGGACATCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: WRKKEQSQHLDLVKDPVPSGDNF*SWDITN Trigger: ATTTGTGATGTCCCAACTGCAAAAATTATCTCCAGA...GGGAACTGGGTCCTTAACTAGATCTAAATGCTGGGACTGCTCTTTCTTTCTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | CACATAAGGTGTCTTAGGCTAGAAAGCTCTACCTTTCAGATAAGTAAGACCCACAACTTCATTTTCATCTaGTTTGTAGGACTGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HIRCLRLESSTFQISKTHNFIFI*FVGLVH Trigger: ATGGACCAGTCCTACAAACCAGATGAAAATGAAGTT...GTGGGTCTTACTTATCTGAAAGGTAGAGCTTTCTAGCCTAAGACACCTTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CCA 90 bp | TCTATGCAGAACGCCAGTCCATTTATAAGTTTATACCAAACAGGAATACTAAGTCCATTATTTCTCTTCTaGCTTAAACGAAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SMQNASPFISLYQTGILSPLFLF*LKRRPK Trigger: CTTTGGTCTTCGTTTAAGCCAGAAGAGAAATAATGG...ACTTAGTATTCCTGTTTGGTATAAACTTATAAATGGACTGGCGTTCTGCATAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 90 bp | TCCTATCAGCTCCTCTTGCTCTTGCATATGCAACGGCCAGGGGCGTaGGGGTCGGGTAGAGGTCATAGACCATGCAGACTCTGGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SYQLLLLLHMQRPGA*GSGRGHRPCRLWPR Trigger: ACGAGGCCAGAGTCTGCATGGTCTATGACCTCTACCCGACCCTCACGCCCCTGGCCGTTGCATATGCAAGAGCAAGAGGAGCTGATAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | CACTCGTGGGTGGTGCCGAAGCCACCAAGAGTTTGCCTTATCACCTaGAAGGCGAGTGCAGTGTATCCGAGACTGCTGTCCTGCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSWVVPKPPRVCLIT*KASAVYPRLLSCSD Trigger: ATCGGAGCAGGACAGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | GCAGCCGCTGGGATGTCTACTGCTCCTCTCAGCTCTGTCACCAGCTaGCAGGCGTTCAAAGCGTCACACAAGTTTATGAATCCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAAGMSTAPLSSVTS*QAFKASHKFMNPGA Trigger: AGCCCCAGGATTCATAAACTTGTGTGACGCTTTGAACGCCTGGCAGCTGGTGACAGAGCTGAGAGGAGCAGTAGACATCCCAGCGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | CTTCATGGACAGCACTCGTGGGTGGTGCCGAAGCCACCAAGAGTTTaGCTTATCACCTGCAAGGCGAGTGCAGTGTATCCGAGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHGQHSWVVPKPPRV*LITCKASAVYPRLL Trigger: CAGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CAA 90 bp | GGGGTGGGGGTGGCATGTCATCATAAGGCAGCGTGGCTTCTCCTGGTTACCTGCAATCCTGGGGCTCCATaGAGAACTGTGATGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVGVACHHKAAWLLLVTCNPGAP*RTVMGS Trigger: ACTTCCCATCACAGTTCTCAATGGAGCCCCAGGATT...GCAGGTAACCAGGAGAAGCCACGCTGCCTTATGATGACATGCCACCCCCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | CTTATCACCTGCAAGGCGAGTGCAGTGTATCCGAGACTGCTGTCCTaGTCCGATGCCAATAACCTGCCCATCCTTGGCATAGCACACCGA | + |
|
Preference number: 5 (lower is better) Translates to: LITCKASAVYPRLLS*SDANNLPILGIAHR Trigger: TCGGTGTGCTATGCCAAGGATGGGCAGGTTATTGGCATCGGAGCAGGACAGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | CTCTTCACCCCGGCTTTAAACTTCATGGACAGCACTCGTGGGTGGTaGCGAAGCCACCAAGAGTTTGCCTTATCACCTGCAAGGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFTPALNFMDSTRGW*RSHQEFALSPARRV Trigger: CACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGTTTAAAGCCGGGGTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 90 bp | GCTCTCTTCACCCCGGCTTTAAACTTCATGGACAGCACTCGTGGGTaGTGCCGAAGCCACCAAGAGTTTGCCTTATCACCTGCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ALFTPALNFMDSTRG*CRSHQEFALSPARR Trigger: TCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGTTTAAAGCCGGGGTGAAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 90 bp | CTCTGCTCTCTTCACCCCGGCTTTAAACTTCATGGACAGCACTCGTaGGTGGTGCCGAAGCCACCAAGAGTTTGCCTTATCACCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCSLHPGFKLHGQHS*VVPKPPRVCLITCK Trigger: CTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGTTTAAAGCCGGGGTGAAGAGAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 90 bp | CTCGTCGCACGCCTCAATCACAACCTTGTCAGCAGTAGATCCAGATaGAGCGACAATGTAGGCCACACCACTCCTTTTAGCTCGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVARLNHNLVSSRSR*SDNVGHTTPFSSVH Trigger: GTGGACCGAGCTAAAAGGAGTGGTGTGGCCTACATTGTCGCTCCATCTGGATCTACTGCTGACAAGGTTGTGATTGAGGCGTGCGACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CAA 90 bp | CTGCACTTAGGTGTCTCACAGGGACTTTTCCTGAAAGCTGGCTCCAGGAGGGAGTCCTATCAGCTCCTCTaGCTCTTGCATATGCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: LHLGVSQGLFLKAGSRRESYQLL*LLHMQR Trigger: CCGTTGCATATGCAAGAGCAAGAGGAGCTGATAGGA...CTCCCTCCTGGAGCCAGCTTTCAGGAAAAGTCCCTGTGAGACACCTAAGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 90 bp | CATTTCACCAGGTCTTCGCCCTCACCGATAGTGCCGGTCACATACTaGTCAATCGCATTGGAGATCTCTGCTCTCTTCACCCCGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HFTRSSPSPIVPVTY*SIALEISALFTPAL Trigger: TAAAGCCGGGGTGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGTATGTGACCGGCACTATCGGTGAGGGCGAAGACCTGGTGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | ACCGATAGTGCCGGTCACATACTGATCAATCGCATTGGAGATCTCTaGTCTCTTCACCCCGGCTTTAAACTTCATGGACAGCACTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TDSAGHILINRIGDL*SLHPGFKLHGQHSW Trigger: CCACGAGTGCTGTCCATGAAGTTTAAAGCCGGGGTGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGTATGTGACCGGCACTATCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CAA 90 bp | TGGAGAAAGAAAGAGCAGTCCCAGCATTTAGATCTAGTTAAGGACCCAGTTCCCGACACGCCGCTCAGCTaGTCCACCCATTCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: WRKKEQSQHLDLVKDPVPDTPLS*STHSFF Trigger: GAAGAAGGAATGGGTGGACAAGCTGAGCGGCGTGTC...GGGAACTGGGTCCTTAACTAGATCTAAATGCTGGGACTGCTCTTTCTTTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 90 bp | TCTTCACGAAGGGGTACAGGTTACAGACCACAACCCTTACAAGGTTaGAATCAAGCCTGGCCATGTCTGCAGCGTCTTCTGGAATGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRRGTGYRPQPLQG*NQAWPCLQRLLECC Trigger: GCAACATTCCAGAAGACGCTGCAGACATGGCCAGGCTTGATTTCAACCTTGTAAGGGTTGTGGTCTGTAACCTGTACCCCTTCGTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CAA 90 bp | GTGAACAGTGAGGACTATAACCACAGGGACATAGATCCAGTTATGTCCTGCCTGACTCGAGCGTGGTTTTaGGCTGCAGCTCTCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VNSEDYNHRDIDPVMSCLTRAWF*AAALSN Trigger: ATTACTGAGAGCTGCAGCCAAAAACCACGCTCGAGT...CAGGCAGGACATAACTGGATCTATGTCCCTGTGGTTATAGTCCTCACTGTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 90 bp | GCCACCAATATCAATTTGTTCAACAGCTGCCTCAACAGTTACATCTaGAGAAGCCACAGTCTTCACGAAGGGGTACAGGTTACAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ATNINLFNSCLNSYI*RSHSLHEGVQVTDH Trigger: GTGGTCTGTAACCTGTACCCCTTCGTGAAGACTGTGGCTTCTCCAGATGTAACTGTTGAGGCAGCTGTTGAACAAATTGATATTGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 90 bp | CATAGTCCTCTGGTTCACAGACGACTGTCACTCGAGCGTGGTTTTTaGCTGCAGCTCTCAGTAATGTCACGCCACCAATATCAATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSPLVHRRLSLERGF*LQLSVMSRHQYQFV Trigger: AACAAATTGATATTGGTGGCGTGACATTACTGAGAGCTGCAGCCAAAAACCACGCTCGAGTGACAGTCGTCTGTGAACCAGAGGACTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS-3UTR CAA 90 bp | AGTTCCAGATCAGCCTCAGTTACAAGTTCCAGGACAGCAGGAGCTACAGAGAAAACAACCCTTACAAGGTaGAAATCAAGCCTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSRSASVTSSRTAGATEKTTLTR*KSSLAM Trigger: CATGGCCAGGCTTGATTTCAACCTTGTAAGGGTTGT...TTTCTCTGTAGCTCCTGCTGTCCTGGAACTTGTAACTGAGGCTGATCTGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 90 bp | CTGAGTATACTTGACAGCGACGGTGGCGACAATGAGGTCTCTGAGTaGAGACTCCGGCAGATCTTTATTCTTGGTGACAATATTGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSILDSDGGDNEVSE*RLRQIFILGDNIAK Trigger: TTTAGCAATATTGTCACCAAGAATAAAGATCTGCCGGAGTCTGCACTCAGAGACCTCATTGTCGCCACCGTCGCTGTCAAGTATACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 90 bp | AGTTGGGACATCACAAATGTCAGACAATGCAACAAAATCACCAAATaGAGACATCCTATCAGCTCCTCTTGCTCTTGCATATGCAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWDITNVRQCNKITK*RHPISSSCSCICNG Trigger: GCCGTTGCATATGCAAGAGCAAGAGGAGCTGATAGGATGTCTTCATTTGGTGATTTTGTTGCATTGTCTGACATTTGTGATGTCCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | AGTGGAACCCCAACAGCAGCACCTGCCGGGCTGACGTaGTTGAAAGAAGCAGCCGCTGGGATGTCTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: SGTPTAAPAGLT*LKEAAAGMSTA Trigger: AGCAGTAGACATCCCAGCGGCTGCTTCTTTCAAGCACGTCAGCCCGGCAGGTGCTGCTGTTGGGGTTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | GCGTCTTCTGGAATGTTGCGTGCCAAGATCCCAGCATaGACCGCAGGGTGCAAGGTTTTCACGCGTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ASSGMLRAKIPA*TAGCKVFTRPP Trigger: AGGGGGACGCGTGAAAACCTTGCACCCTGCGGTCCATGCTGGGATCTTGGCACGCAACATTCCAGAAGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | ACCTGCCGGGCTGACGTGCTTGAAAGAAGCAGCCGCTaGGATGTCTACTGCTCCTCTCAGCTCTGTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TCRADVLERSSR*DVYCSSQLCHQ Trigger: CTGGTGACAGAGCTGAGAGGAGCAGTAGACATCCCAGCGGCTGCTTCTTTCAAGCACGTCAGCCCGGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 72 bp | AAGAAGGCGTCGGAGCTGACAGACACGCCGCTCAGCTaGTCCACCCATTCCTTCTTCTCCGCCTCCGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: KKASELTDTPLS*STHSFFSASVS Trigger: ACTCACGGAGGCGGAGAAGAAGGAATGGGTGGACAAGCTGAGCGGCGTGTCTGTCAGCTCCGACGCCTTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 72 bp | CTCCTCTTGCTCTTGCATATGCAACGGCCAGGGGCGTaGGGGTCGGGTAGAGGTCATAGACCATGCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: LLLLLHMQRPGA*GSGRGHRPCRL Trigger: GAGTCTGCATGGTCTATGACCTCTACCCGACCCTCACGCCCCTGGCCGTTGCATATGCAAGAGCAAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | CAGCACTCGTGGGTGGTGCCGAAGCCACCAAGAGTTTaGCTTATCACCTGCAAGGCGAGTGCAGTGTATCCG | + |
|
Preference number: 6 (lower is better) Translates to: QHSWVVPKPPRV*LITCKASAVYP Trigger: CGGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 90 bp | CTGAAAGGAAAGAAGGCGTCGGAGCTGACAGACACGCCGCTCAGCTaGTCCACCCATTCCTTCTTCTCCGCCTCCGTGAGTAACTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LKGKKASELTDTPLS*STHSFFSASVSNSG Trigger: TCCTGAGTTACTCACGGAGGCGGAGAAGAAGGAATGGGTGGACAAGCTGAGCGGCGTGTCTGTCAGCTCCGACGCCTTCTTTCCTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | ATGTTGCGTGCCAAGATCCCAGCATGGACCGCAGGGTaGAAGGTTTTCACGCGTCCCCCTAACATTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MLRAKIPAWTAG*KVFTRPPNISG Trigger: CCCTGAAATGTTAGGGGGACGCGTGAAAACCTTGCACCCTGCGGTCCATGCTGGGATCTTGGCACGCAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | GCCACCAAGAGTTTGCCTTATCACCTGCAAGGCGAGTaGAGTGTATCCGAGACTGCTGTCCTGCTCCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ATKSLPYHLQGE*SVSETAVLLRC Trigger: GCATCGGAGCAGGACAGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | GTGGTGCCGAAGCCACCAAGAGTTTGCCTTATCACCTaGAAGGCGAGTGCAGTGTATCCGAGACTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VVPKPPRVCLIT*KASAVYPRLLS Trigger: GGACAGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | GCCGTGCATCTCTGCAGCTACCCCCGCATAGTCCTCTaGTTCACAGACGACTGTCACTCGAGCGTGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AVHLCSYPRIVL*FTDDCHSSVVF Trigger: AAAAACCACGCTCGAGTGACAGTCGTCTGTGAACCAGAGGACTATGCGGGGGTAGCTGCAGAGATGCACGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 72 bp | ACAGCACTCGTGGGTGGTGCCGAAGCCACCAAGAGTTaGCCTTATCACCTGCAAGGCGAGTGCAGTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: TALVGGAEATKS*PYHLQGECSVS Trigger: GGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 90 bp | ACTTCATGGACAGCACTCGTGGGTGGTGCCGAAGCCACCAAGAGTTaGCCTTATCACCTGCAAGGCGAGTGCAGTGTATCCGAGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSWTALVGGAEATKS*PYHLQGECSVSETA Trigger: AGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | TGCAAGGCGAGTGCAGTGTATCCGAGACTGCTGTCCTaGTCCGATGCCAATAACCTGCCCATCCTTGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: CKASAVYPRLLS*SDANNLPILGI Trigger: TATGCCAAGGATGGGCAGGTTATTGGCATCGGAGCAGGACAGCAGTCTCGGATACACTGCACTCGCCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | TTATCACCTGCAAGGCGAGTGCAGTGTATCCGAGACTaGTGTCCTGCTCCGATGCCAATAACCTGCCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LSPARRVQCIRD*CPAPMPITCPS Trigger: GGATGGGCAGGTTATTGGCATCGGAGCAGGACAGCAGTCTCGGATACACTGCACTCGCCTTGCAGGTGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | CCGGCTTTAAACTTCATGGACAGCACTCGTGGGTGGTaGCGAAGCCACCAAGAGTTTGCCTTATCACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PALNFMDSTRGW*RSHQEFALSPA Trigger: TGCAGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGTTTAAAGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | ACCCCGGCTTTAAACTTCATGGACAGCACTCGTGGGTaGTGCCGAAGCCACCAAGAGTTTGCCTTATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TPALNFMDSTRG*CRSHQEFALSP Trigger: AGGTGATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGTTTAAAGCCGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | CTTCACCCCGGCTTTAAACTTCATGGACAGCACTCGTaGGTGGTGCCGAAGCCACCAAGAGTTTGCCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: LHPGFKLHGQHS*VVPKPPRVCLI Trigger: GATAAGGCAAACTCTTGGTGGCTTCGGCACCACCCACGAGTGCTGTCCATGAAGTTTAAAGCCGGGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 72 bp | AGGTCTTCGCCCTCACCGATAGTGCCGGTCACATACTaGTCAATCGCATTGGAGATCTCTGCTCTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: RSSPSPIVPVTY*SIALEISALFT Trigger: GGTGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGTATGTGACCGGCACTATCGGTGAGGGCGAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS TCA 72 bp | AGGGGTACAGGTTACAGACCACAACCCTTACAAGGTTaGAATCAAGCCTGGCCATGTCTGCAGCGTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGTGYRPQPLQG*NQAWPCLQRLL Trigger: CAGAAGACGCTGCAGACATGGCCAGGCTTGATTTCAACCTTGTAAGGGTTGTGGTCTGTAACCTGTACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | AACCCTTACAAGGTTGAAATCAAGCCTGGCCATGTCTaGAGCGTCTTCTGGAATGTTGCGTGCCAAGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: NPYKVEIKPGHV*SVFWNVACQDP Trigger: GGGATCTTGGCACGCAACATTCCAGAAGACGCTGCAGACATGGCCAGGCTTGATTTCAACCTTGTAAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | CGCCTCAATCACAACCTTGTCAGCAGTAGATCCAGATaGAGCGACAATGTAGGCCACACCACTCCTTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLNHNLVSSRSR*SDNVGHTTPFS Trigger: GCTAAAAGGAGTGGTGTGGCCTACATTGTCGCTCCATCTGGATCTACTGCTGACAAGGTTGTGATTGAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 72 bp | TCTGGTTCACAGACGACTGTCACTCGAGCGTGGTTTTaGGCTGCAGCTCTCAGTAATGTCACGCCACCAATA | + |
|
Preference number: 6 (lower is better) Translates to: SGSQTTVTRAWF*AAALSNVTPPI Trigger: TATTGGTGGCGTGACATTACTGAGAGCTGCAGCCAAAAACCACGCTCGAGTGACAGTCGTCTGTGAACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 90 bp | GTCTTCACGAAGGGGTACAGGTTACAGACCACAACCCTTACAAGGTaGAAATCAAGCCTGGCCATGTCTGCAGCGTCTTCTGGAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VFTKGYRLQTTTLTR*KSSLAMSAASSGML Trigger: CAACATTCCAGAAGACGCTGCAGACATGGCCAGGCTTGATTTCAACCTTGTAAGGGTTGTGGTCTGTAACCTGTACCCCTTCGTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS GCA 72 bp | GCCGGTCACATACTGATCAATCGCATTGGAGATCTCTaGTCTCTTCACCCCGGCTTTAAACTTCATGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: AGHILINRIGDL*SLHPGFKLHGQ Trigger: CTGTCCATGAAGTTTAAAGCCGGGGTGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGTATGTGACCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | ACGAAGACCAAAGAGTGTTCGAACTTCATTTTCATCTaGTTTGTAGGACTGGTCCATCTGAAGAACACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TKTKECSNFIFI*FVGLVHLKNTV Trigger: TACTGTGTTCTTCAGATGGACCAGTCCTACAAACCAGATGAAAATGAAGTTCGAACACTCTTTGGTCTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 72 bp | AGGTCTCTGAGTGCAGACTCCGGCAGATCTTTATTCTaGGTGACAATATTGCTAAATAATGACTTGTCAACG | + |
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Preference number: 6 (lower is better) Translates to: RSLSADSGRSLF*VTILLNNDLST Trigger: CGTTGACAAGTCATTATTTAGCAATATTGTCACCAAGAATAAAGATCTGCCGGAGTCTGCACTCAGAGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 90 bp | TCTCTGAGTGCAGACTCCGGCAGATCTTTATTCTTGGTGACAATATaGCTAAATAATGACTTGTCAACGACACCATTATTTCTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLSADSGRSLFLVTI*LNNDLSTTPLFLFW Trigger: CCAGAAGAGAAATAATGGTGTCGTTGACAAGTCATTATTTAGCAATATTGTCACCAAGAATAAAGATCTGCCGGAGTCTGCACTCAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | ACCATCCGACACTTCTCTGGAGATAATTTTTGCAGTTaGGACATCACAAATGTCAGACAATGCAACAAAATC | + |
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Preference number: 6 (lower is better) Translates to: TIRHFSGDNFCS*DITNVRQCNKI Trigger: GATTTTGTTGCATTGTCTGACATTTGTGATGTCCCAACTGCAAAAATTATCTCCAGAGAAGTGTCGGATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 90 bp | TCCGGCAGATCTTTATTCTTGGTGACAATATTGCTAAATAATGACTaGTCAACGACACCATTATTTCTCTTCTGGCTTAAACGAAGACCA | + |
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Preference number: 6 (lower is better) Translates to: SGRSLFLVTILLNND*STTPLFLFWLKRRP Trigger: TGGTCTTCGTTTAAGCCAGAAGAGAAATAATGGTGTCGTTGACAAGTCATTATTTAGCAATATTGTCACCAAGAATAAAGATCTGCCGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CCA 72 bp | AATAATGACTTGTCAACGACACCATTATTTCTCTTCTaGCTTAAACGAAGACCAAAGAGTGTTCGAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: NNDLSTTPLFLF*LKRRPKSVRTS Trigger: TGAAGTTCGAACACTCTTTGGTCTTCGTTTAAGCCAGAAGAGAAATAATGGTGTCGTTGACAAGTCATTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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| CDS CAA 72 bp | GCAGACTCCGGCAGATCTTTATTCTTGGTGACAATATaGCTAAATAATGACTTGTCAACGACACCATTATTT | + |
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Preference number: 6 (lower is better) Translates to: ADSGRSLFLVTI*LNNDLSTTPLF Trigger: AAATAATGGTGTCGTTGACAAGTCATTATTTAGCAATATTGTCACCAAGAATAAAGATCTGCCGGAGTCTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027384.6 |
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