Pregenerated sensors for ATG9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038295Ensembl transcript IDs: ENSMUST00000059401.7
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCCTAACACTGAGTTGAACCATGCCTGGGCCCTGGCCCCACCTTaGGGCCACTGGGGTCCTTCCCAGGCAACTGCTCCACAACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: FPNTELNHAWALAPP*GHWGPSQATAPQPA Trigger: GGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGTGGGGCCAGGGCCCAGGCATGGTTCAACTCAGTGTTAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR GCA 90 bp | GGCCCTGGCCCCACCTTGAGGCCACTGGGGTCCTTCCCAGGCAACTaGTCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: GPGPTLRPLGSFPGN*STTSQASVLLSSLV Trigger: CACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGTGGGGCCAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 90 bp | AGGATGAGGAGTCCCACCCACTTCCTCCTGCTATCACAGCAGTGCTaGCGTCCAAAACCAGCAGCCCTCTCTGGTTTTTCCACTCACCCG | + |
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Preference number: 1 (lower is better) Translates to: RMRSPTHFLLLSQQC*RPKPAALSGFSTHP Trigger: CGGGTGAGTGGAAAAACCAGAGAGGGCTGCTGGTTTTGGACGTCAGCACTGCTGTGATAGCAGGAGGAAGTGGGTGGGACTCCTCATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR GCA 90 bp | GGAAATAGGAATGGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATaGCACCCATCAAATTTCCTGCAGCTGGAAAAGCCAGAACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: GNRNGAQKMASSVLP*HPSNFLQLEKPEPE Trigger: CTCAGGTTCTGGCTTTTCCAGCTGCAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCCATTCCTATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTACCATGCCTGGGCCCTaGCCCCACCTTGAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSTMPGP*PHLEAT Trigger: AGTGGCCTCAAGGTGGGGCCAGGGCCCAGGCATGGT...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCTCCTGCTATCACAGCAGTGCTGACGTCCAAAACCAGCAGCCCTCTCTGTCAAGTGTCCTTCCATaGCACCCATCAAATTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TSSCYHSSADVQNQQPSLSSVLP*HPSNFL Trigger: CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGA...CAGAGAGGGCTGCTGGTTTTGGACGTCAGCACTGCTGTGATAGCAGGAGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR CCA 90 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGGCCAAATTTCCTGCAGCTaGAAAAGCCAGAACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: QPARLVFSYPHLWGPSVGQISCS*KSQNLR Trigger: TCTCAGGTTCTGGCTTTTCCAGCTGCAGGAAATTTG...GCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTTTTGACTCCCAGATATaGCCAACTAAAATATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: STTSQASVLLSSLVGPICFDSQI*PTKISW Trigger: CCAGGATATTTTAGTTGGCCATATCTGGGAGTCAAA...ACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTACCCATCAAATTTCCTaGAGCTGGAAAAGCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFTHQIS*SWKSQN Trigger: GTTCTGGCTTTTCCAGCTGCAGGAAATTTGATGGGT...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 72 bp | GGGAGGTCGACAGGAACAACTTCCCTAACACTGAGTTaGACCATGCCTGGGCCCTGGCCCCACCTTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: GRSTGTTSLTLS*TMPGPWPHLEA Trigger: GGCCTCAAGGTGGGGCCAGGGCCCAGGCATGGTTCAACTCAGTGTTAGGGAAGTTGTTCCTGTCGACCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR GCA 72 bp | CCCACCTTGAGGCCACTGGGGTCCTTCCCAGGCAACTaGTCCACAACCAGCCAGGCTAGTGTTCTCTTATCC | + |
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Preference number: 3 (lower is better) Translates to: PTLRPLGSFPGN*STTSQASVLLS Trigger: GGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR CAA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTGGCCCTGGCCCCACCTaGAGGCCACTGGGGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFGPGPT*RPLGSF Trigger: GAAGGACCCCAGTGGCCTCAAGGTGGGGCCAGGGCC...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 72 bp | AGTCCCACCCACTTCCTCCTGCTATCACAGCAGTGCTaGCGTCCAAAACCAGCAGCCCTCTCTGGTTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SPTHFLLLSQQC*RPKPAALSGFS Trigger: GGAAAAACCAGAGAGGGCTGCTGGTTTTGGACGTCAGCACTGCTGTGATAGCAGGAGGAAGTGGGTGGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR CCA 72 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTaGGGCCCATCTGTAGGCTACCTCAGCTCACAATCA | + |
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Preference number: 3 (lower is better) Translates to: QPARLVFSYPHL*GPSVGYLSSQS Trigger: TGATTGTGAGCTGAGGTAGCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTTTCCCTAACACTGAGTaGAACCATGCCTGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSFPNTE*NHAWAL Trigger: CAGGGCCCAGGCATGGTTCAACTCAGTGTTAGGGAA...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR GCA 72 bp | GAGTGGGGCGTGCCAGACATTCCCATGGCAAAGATGTaGAGCTCAACCATGAGCAATTTCTGCTGCTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: EWGVPDIPMAKM*SSTMSNFCCLF Trigger: AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAATGTCTGGCACGCCCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR CCA 72 bp | TGTTCTCCGGGCAAGCCCCTCTTTGACTCCCAGATATaGCCAACTAAAATATCCTGGGCCTGTCATCGGAAA | + |
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Preference number: 3 (lower is better) Translates to: CSPGKPLFDSQI*PTKISWACHRK Trigger: TTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAAAGAGGGGCTTGCCCGGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR GCA 72 bp | AATGGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATaGCACCCATCAAATTTCCTGCAGCTGGAAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: NGAQKMASSVLP*HPSNFLQLEKP Trigger: TGGCTTTTCCAGCTGCAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 72 bp | CAGACATTCCCATGGCAAAGATGTGCAGCTCAACCATaGGCAATTTCTGCTGCTTGTTTCGTACAGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: QTFPWQRCAAQP*AISAACFVQDE Trigger: CTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAATGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 72 bp | AAAAAGTTTCTAACCAGGGACAGACAGTTTTGCGCTTaGGTGAACAGGTGCAGTCCTCAGCTTCCAAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: KKFLTRDRQFCA*VNRCSPQLPRV Trigger: CACTCTTGGAAGCTGAGGACTGCACCTGTTCACTCAAGCGCAAAACTGTCTGTCCCTGGTTAGAAACTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 72 bp | ATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATaGTTGAAAATGAGACTTGTTCAATGCTTTAATGTG | + |
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Preference number: 3 (lower is better) Translates to: MPDAQPKPCELQ*LKMRLVQCFNV Trigger: CACATTAAAGCATTGAACAAGTCTCATTTTCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR TCA 72 bp | ATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTaGGTTACAATGATTGAAAATGAGACTTGTTCAATG | + |
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Preference number: 3 (lower is better) Translates to: IKDHARCPTQTL*VTMIENETCSM Trigger: CATTGAACAAGTCTCATTTTCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | ACCTTGAGGCCACTGGGGTCCTTCCCAGGCAACTGCTCCACAACCAGCCAGGCTCATGTGCGCCAGGGCTaGCTGCAGCAGAAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TLRPLGSFPGNCSTTSQAHVRQG*LQQKLG Trigger: TCCCAGCTTCTGCTGCAGGCAGCCCTGGCGCACATG...AGCCTGGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGGCCTGGCTGTGAAGGGCTaGACCAGGGCCTGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: QPARLVFSYPHLWGPSVGLAVKG*TRAWMG Trigger: CCCCATCCAGGCCCTGGTCCAGCCCTTCACAGCCAG...GCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | ACCTTGAGGCCACTGGGGTCCTTCCCAGGCAACTGCTCCACAACCAGCCAGGCTAGATTCTGGGCCCTCTaGGTGCCCCACTGTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TLRPLGSFPGNCSTTSQARFWAL*VPHCCL Trigger: AAGACAACAGTGGGGCACCCAGAGGGCCCAGAATCT...AGCCTGGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGGCTTAAAGTGGCGAAGCTaGAGGCGGGCCAGGCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QPARLVFSYPHLWGPSVGLKWRS*RRARRD Trigger: GTCCCGCCTGGCCCGCCTGCAGCTTCGCCACTTTAA...GCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | GGCAACTGCTCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGGAGACTGCTCGGTACTaGAGCAGCTGCGCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GNCSTTSQASVLLSSLVGETARY*SSCAIC Trigger: GCAGATGGCGCAGCTGCTTCAGTACCGAGCAGTCTC...CCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | GGCAACTGCTCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGATTGTGGGATGGGCCTaGGTTGAGGGTGTGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GNCSTTSQASVLLSSLVGIVGWA*VEGVVG Trigger: CCCGACCACACCCTCAACGCAGGCCCATCCCACAAT...CCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGGAGGCTGGCTGTGGCTaGAGCAGGGCAGGGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GAQKMASSVLPCHPSNFLEAGCG*SRAGGC Trigger: ACAGCCCCCTGCCCTGCTGCAGCCACAGCCAGCCTC...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCCATCTGTAGGCTACCTCAGCTCACAATCATCTCCTACTTTTTCACTGAGAAGAAGACCAGCTaGCGGGCCAGCAGCGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: VGPICRLPQLTIISYFFTEKKTS*RASSAR Trigger: GCGCGCGCTGCTGGCCCGCCAGCTGGTCTTCTTCTC...AGTGAAAAAGTAGGAGATGATTGTGAGCTGAGGTAGCCTACAGATGGGCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCCATCTGTAGGCTACCTCAGCTCACAATCATCTCCTACTTTTTCACTCAGGGCAGGGGGCTGTaGGACTCAGGTCCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VGPICRLPQLTIISYFFTQGRGL*DSGPSG Trigger: CCCAGAGGGACCTGAGTCCCACAGCCCCCTGCCCTG...AGTGAAAAAGTAGGAGATGATTGTGAGCTGAGGTAGCCTACAGATGGGCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGGCACAAGCTCTGGGAGCTaGGTCAGCTTCTGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QPARLVFSYPHLWGPSVGTSSGS*VSFWPP Trigger: AGGGGGCCAGAAGCTGACCCAGCTCCCAGAGCTTGT...GCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | GGCAACTGCTCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGGGCCGGAGGGAACACTaGAGAGGAGCAGCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GNCSTTSQASVLLSSLVGGRREH*RGAASC Trigger: ACAAGAAGCTGCTCCTCTTCAGTGTTCCCTCCGGCC...CCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | TCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGCAGGCAGTGGCAGTaGCATAGGGAGCAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: STTSQASVLLSSLVGPICSRQWQ*HREQRH Trigger: GTGCCTCTGCTCCCTATGGCACTGCCACTGCCTGCT...ACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GGCAACTGCTCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGTGGAGAAGCAGGCAGTaGCAGTGCCATAGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GNCSTTSQASVLLSSLVGWRSRQ*QCHREQ Trigger: CTGCTCCCTATGGCACTGCCACTGCCTGCTTCTCCA...CCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGAGCTGTGCCCTGGTaGCTGCCATTGTGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: STTSQASVLLSSLVGPICRAVPW*LPLWVC Trigger: GCACACCCACAATGGCAGCCACCAGGGCACAGCTCT...ACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | TCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTGGATGTCCCAGTAGCTaGAGAGGTTGCAGACCGAGC | + |
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Preference number: 4 (lower is better) Translates to: STTSQASVLLSSLVGPICGCPSS*RGCRPS Trigger: GCTCGGTCTGCAACCTCTTCAGCTACTGGGACATCC...ACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGTCTGGGCCCTCTGGGTaGCCCACTGTTGTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GAQKMASSVLPCHPSNFLSGPSG*PTVVLG Trigger: GCCCAAGACAACAGTGGGGCACCCAGAGGGCCCAGA...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GGCAACTGCTCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGAGGGTGTGGTCGGGGTaGGTAAGACATTGTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GNCSTTSQASVLLSSLVGRVWSG*VRHCVE Trigger: CTCCACACAATGTCTTACCCACCCCGACCACACCCT...CCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGAGCAGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTATCCGCAGCCCAGGATaGTCCTGGGGGCGCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFIRSPG*SWGRGQ Trigger: CTGCCCGCGCCCCCAGGACCATCCTGGGCTGCGGAT...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTAGCTGGGTCAGCTTCTaGCCCCCTGTGCCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSSWVSF*PPVPPG Trigger: CCCAGGAGGCACAGGGGGCCAGAAGCTGACCCAGCT...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGAGGGAGCAGAGGCACTaGGCTGGGCCCCAAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLREQRH*AGPQVS Trigger: GGAGACTTGGGGCCCAGCTCAGTGCCTCTGCTCCCT...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTGCCCCCGCGGAAGAGTaGGAAGGGACCGCGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFAPAEE*EGTAEE Trigger: CTCTTCCGCGGTCCCTTCTCACTCTTCCGCGGGGGC...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGTGCACGCTGAGAGAGTaGGGCCTCTGTCTGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GAQKMASSVLPCHPSNFLCTLRE*GLCLSL Trigger: GAGGGACAGACAGAGGCCTCACTCTCTCAGCGTGCA...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTGGGATGTACAGTCACTaGGCACTCCTGGGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSGMYSH*ALLGWG Trigger: CCCCCACCCCAGGAGTGCTCAGTGACTGTACATCCC...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTAGCCCACCGCTCCTCTaGAGTTCCAGGAGGCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSSPPLL*SSRRRD Trigger: GTCTCGCCTCCTGGAACTGCAGAGGAGCGGTGGGCT...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGTCCAGGTTCTGGATGTaGTGCCAGGAACCGCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GAQKMASSVLPCHPSNFLSRFWM*CQEPRS Trigger: ACTCCGCGGTTCCTGGCATCACATCCAGAACCTGGA...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGAAGGCGTGCAATACCTaGCAGGCCAGCACCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLKACNT*QASTSG Trigger: CCCGCTGGTGCTGGCCTGGCAGGTATTGCACGCCTT...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGCCTGCAGCAGAAGCTaGGAGGAACGCCCCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLACSRS*EERPWH Trigger: ATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGC...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTGAAGCCCCTGCCTCCTaGATCACCAGGCAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFEAPAS*ITRQGD Trigger: GTCTCCCTGCCTGGTGATTCAGGAGGCAGGGGCTTC...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGCCATCCTCTGCACGCTaGGAGAGTGAGGCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLPSSAR*ESEASV Trigger: GACAGAGGCCTCACTCTCTCAGCGTGCAGAGGATGG...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCCCAGTTCCCCGGCATaGAGAAGCAGGCAGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFPSSPA*RSRQWQ Trigger: CTGCCACTGCCTGCTTCTCCATGCCGGGGAACTGGG...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTCCTGCGTTGAGGGTGTaGTCGGGGTGGGTAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSPALRV*SGWVRH Trigger: ATGTCTTACCCACCCCGACCACACCCTCAACGCAGG...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | ACCTTGAGGCCACTGGGGTCCTTCCCAGGCAACTGCTCCACAACCAGCCAGGCTTCTTGTATGGTTCTTTaGTTGGTTGTTGAAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TLRPLGSFPGNCSTTSQASCMVL*LVVEEN Trigger: GTTCTCTTCAACAACCAACCAAAGAACCATACAAGA...AGCCTGGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGACGCTACCTGGTAGTTaGTGTAGCGCAGGATGCGGT | + |
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Preference number: 4 (lower is better) Translates to: GAQKMASSVLPCHPSNFLTLPGS*CSAGCG Trigger: ACCGCATCCTGCGCTACACCAACTACCAGGTAGCGT...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTGGCAGCTCGTTAAAGTaGCGAAGCTGCAGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFGSSLK*RSCRRA Trigger: GGCCCGCCTGCAGCTTCGCCACTTTAACGAGCTGCC...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTGAAGAGCAGAAACAATaGGGTCAGGAGTGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: STTSQASVLLSSLVGPICEEQKQ*GQEWRQ Trigger: CTGTCTCCACTCCTGACCCCATTGTTTCTGCTCTTC...ACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGTGGTGGCTGCCATTGTaGGTGTGCCAGGGAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLWWLPL*VCQGEP Trigger: CGGTTCTCCCTGGCACACCCACAATGGCAGCCACCA...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTGCCCCCTGTGCCTCCTaGGGACACACAGCTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SYALMDCRLPLTLSLEYLAPCAS*GHTAGV Trigger: GACCCCAGCTGTGTGTCCCCAGGAGGCACAGGGGGC...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGTGGATAGGGGAGTCTTaGGACCCCTCAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRWIGES*DPSGSQ Trigger: CTGTGACCCTGAGGGGTCTCAAGACTCCCCTATCCA...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGCCTCATCGTAGATGGTaGGCACTAGCAGCGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLPHRRW*ALAARQ Trigger: TTGCCGCGCTGCTAGTGCTCACCATCTACGATGAGG...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGTGGTGTAGCGCAGGATaGGGTGGTGGACGTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRWCSAG*GGGRPV Trigger: AACTGGACGTCCACCACCGCATCCTGCGCTACACCA...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGAGGAACTTAGAGCTGTaGCCTGGTGGCTGCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAQKMASSVLPCHPSNFLRNLEL*PGGCHC Trigger: ACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCT...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | TCCACAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTACAATGAAAATGAACTaGCCCAGCTGGAAGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: STTSQASVLLSSLVGPICTMKMN*PSWKTS Trigger: GGATGTCTTCCAGCTGGGGCAGTTCATTTTCATTGT...ACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTCGCGCACGCAGCTCGTaGGGCAGCTCGTTAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SYALMDCRLPLTLSLEYLRARSS*GSSLKW Trigger: CCACTTTAACGAGCTGCCGCACGAGCTGCGTGCGCG...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGATGAACTGCCCCAGCTaGAAGACATCCTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRMNCPS*KTSSSR Trigger: CCTGCTGGAGGATGTCTTCCAGCTGGGGCAGTTCAT...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR GCA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTAGCACCCCAGGCAGCTaGATCTTGTTGTACCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYALMDCRLPLTLSLEYLSTPGS*ILLYPA Trigger: GGCCGGGTACAACAAGATGCAGCTGCCTGGGGTGCT...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGTGTATCATTGTGGGATaGGCCTGCGTTGAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRCIIVG*ACVEGV Trigger: CACACCCTCAACGCAGGCCCATCCCACAATGATACA...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGAGGTGTGTATCATTGTaGGATGGGCCTGCGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLRCVSL*DGPALR Trigger: CCTCAACGCAGGCCCATCCCACAATGATACACACCT...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTGGCAAGGAAGGCTTCTaGCAGAGGGGATGTACAGTC | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFGKEGF*QRGCTV Trigger: GACTGTACATCCCCTCTGCCAGAAGCCTTCCTTGCC...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTCTGGGGACACACAGCTaGGGTCCTGGACCATTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SYALMDCRLPLTLSLEYLLGTHS*GPGPFV Trigger: CACGAATGGTCCAGGACCCCAGCTGTGTGTCCCCAG...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTGTCCTGGACCATTCGTaGAATAGAGGCAAGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFVLDHS*NRGKEA Trigger: AGCCTCCTTGCCTCTATTTCACGAATGGTCCAGGAC...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGGCAAAGATGTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTACTGGAGCCATCACTTaGCCAAGATGGCTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IPMAKMCSSTMSNFCCLFTGAIT*PRWLLL Trigger: GAGGAGAAGCCATCTTGGTCAAGTGATGGCTCCAGT...AAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCACATCTTTGCCATGGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTTTTGGGAACAGATTCTaGGCCCTCTGGGTGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SYALMDCRLPLTLSLEYLFGNRF*ALWVPH Trigger: GTGGGGCACCCAGAGGGCCCAGAATCTGTTCCCAAA...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTAGCAGAGACAAGCTCTaGGAGCTGGGTCAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SYALMDCRLPLTLSLEYLSRDKL*ELGQLL Trigger: CAGAAGCTGACCCAGCTCCCAGAGCTTGTCTCTGCT...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGGGTCCACGTCTTGTATaGTTCTTTGGTTGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRGPRLV*FFGWLL Trigger: CAACAACCAACCAAAGAACCATACAAGACGTGGACC...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGAGCTGTAGATCTTGGTaGAAAAACTGTCCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSSYALMDCRLPLTLSLSCRSW*KNCPGS Trigger: AGAACCTGGACAGTTTTTTCACCAAGATCTACAGCT...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTGTATGGTTCTTTGGTTaGTTGTTGAAGAGAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSVWFFG*LLKRTL Trigger: CAATGTTCTCTTCAACAACCAACCAAAGAACCATAC...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| 3UTR CAA 72 bp | ATCTTACGTTTAAAGTCTAAGTCATCCCGGTATTTATaGAAAAATTATCATAAAAGACCATGCCAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRLKSKSSRYL*KNYHKRPCQMP Trigger: GGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGACTTAGACTTTAAACGTAAGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | AGTTCCGTCAGCGGCCGCGGCTGCACACACAGCCCACCGCTCCTCTaGAGTTCCAGGAGGCGAGACTGCACCTCGGCCCAGGGTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVSGRGCTHSPPLL*SSRRRDCTSAQGTE Trigger: CTCGGTACCCTGGGCCGAGGTGCAGTCTCGCCTCCTGGAACTGCAGAGGAGCGGTGGGCTGTGTGTGCAGCCGCGGCCGCTGACGGAACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | TGCACACACAGCCCACCGCTCCTCTGCAGTTCCAGGAGGCGAGACTaGACCTCGGCCCAGGGTACCGAGCTGAGCTCCTCTGGGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: CTHSPPLLCSSRRRD*TSAQGTELSSSGGM Trigger: CATTCCCCCAGAGGAGCTCAGCTCGGTACCCTGGGCCGAGGTGCAGTCTCGCCTCCTGGAACTGCAGAGGAGCGGTGGGCTGTGTGTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | GCCAGGGCTGCCTGCAGCAGAAGCTGGGAGGAACGCCCCTGGCATTaGTCTTCTGGAATGAAGGACCTGGCCACAGTGGCTGTGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARAACSRSWEERPWH*SSGMKDLATVAVTP Trigger: CGGGGTCACAGCCACTGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCAGCCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | GACCCTTGTTGGCTAACGCTACCTGGTAGTTGGTGTAGCGCAGGATaGGGTGGTGGACGTCCAGTTCCGTCAGCGGCCGCGGCTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: DPCWLTLPGSWCSAG*GGGRPVPSAAAAAH Trigger: GTGTGCAGCCGCGGCCGCTGACGGAACTGGACGTCCACCACCGCATCCTGCGCTACACCAACTACCAGGTAGCGTTAGCCAACAAGGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | AAGCAGCTGCGCCATCTGCCAGTAAGAGCTGGCTCGAGCACCCGTTaGACCAGGCTCCTCTGGGAGGTAATGCATGTGCGCCAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQLRHLPVRAGSSTR*TRLLWEVMHVRQGC Trigger: GCAGCCCTGGCGCACATGCATTACCTCCCAGAGGAGCCTGGTGCAACGGGTGCTCGAGCCAGCTCTTACTGGCAGATGGCGCAGCTGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | TGCCTGCAGCAGAAGCTGGGAGGAACGCCCCTGGCATTGCTCTTCTaGAATGAAGGACCTGGCCACAGTGGCTGTGACCCCGAGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: CLQQKLGGTPLALLF*NEGPGHSGCDPERR Trigger: ACGGCGCTCGGGGTCACAGCCACTGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | CTGCCAGTAAGAGCTGGCTCGAGCACCCGTTGCACCAGGCTCCTCTaGGAGGTAATGCATGTGCGCCAGGGCTGCCTGCAGCAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPVRAGSSTRCTRLL*EVMHVRQGCLQQKL Trigger: CAGCTTCTGCTGCAGGCAGCCCTGGCGCACATGCATTACCTCCCAGAGGAGCCTGGTGCAACGGGTGCTCGAGCCAGCTCTTACTGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | ATGTGCGCCAGGGCTGCCTGCAGCAGAAGCTGGGAGGAACGCCCCTaGCATTGCTCTTCTGGAATGAAGGACCTGGCCACAGTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MCARAACSRSWEERP*HCSSGMKDLATVAV Trigger: CACAGCCACTGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCAGCCCTGGCGCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | CGGCCCCGAAGGTGTCCAAGGAACTTAGAGCTGTGCCCTGGTGGCTaGCATTGTGGGTGTGCCAGGGAGAACCGCATTAAGGAGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPRRCPRNLELCPGG*HCGCARENRIKESS Trigger: CGAACTCTCCTTAATGCGGTTCTCCCTGGCACACCCACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCTTGGACACCTTCGGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | AGACTGCTCGGTACTGAAGCAGCTGCGCCATCTGCCAGTAAGAGCTaGCTCGAGCACCCGTTGCACCAGGCTCCTCTGGGAGGTAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLGTEAAAPSASKS*LEHPLHQAPLGGNA Trigger: TGCATTACCTCCCAGAGGAGCCTGGTGCAACGGGTGCTCGAGCCAGCTCTTACTGGCAGATGGCGCAGCTGCTTCAGTACCGAGCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | TCTTGTTGTACCCGGCCCCGAAGGTGTCCAAGGAACTTAGAGCTGTaGCCTGGTGGCTGCCATTGTGGGTGTGCCAGGGAGAACCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SCCTRPRRCPRNLEL*PGGCHCGCARENRI Trigger: AATGCGGTTCTCCCTGGCACACCCACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCTTGGACACCTTCGGGGCCGGGTACAACAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | ACCTTGAGGCCACTGGGGTCCTTCCCAGGCAACTGCTCCACAACCAGCCAGGCTTACATGAAGCAAGGGTaGGTGGTCCTCCCCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLRPLGSFPGNCSTTSQAYMKQG*VVLPMD Trigger: ATCCATGGGGAGGACCACCAACCCTTGCTTCATGTA...AGCCTGGCTGGTTGTGGAGCAGTTGCCTGGGAAGGACCCCAGTGGCCTCAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGGCGGCAGCTGCATCTTGTaGTACCCGGCCCCGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPARLVFSYPHLWGPSVGGSCIL*YPAPKV Trigger: CACCTTCGGGGCCGGGTACAACAAGATGCAGCTGCC...GCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | AAGCCAGCAGCCAGGACTAGGAGGAAGACCAACAGGGGACTGTCGTaGATCTTCTCTGCACACTGGGCCGAGGGTAGAATGGCATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KPAARTRRKTNRGLS*IFSAHWAEGRMASD Trigger: GTCAGATGCCATTCTACCCTCGGCCCAGTGTGCAGAGAAGATCCACGACAGTCCCCTGTTGGTCTTCCTCCTAGTCCTGGCTGCTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS TCA 90 bp | GAATGTGCAGGGCCTCCCTGTAAAACACCTGGATGTCCCAGTAGCTaGAGAGGTTGCAGACCGAGCGAAGCAGCTGGAACAGCCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECAGPPCKTPGCPSS*RGCRPSEAAGTARS Trigger: GCTTCTGGCTGTTCCAGCTGCTTCGCTCGGTCTGCAACCTCTTCAGCTACTGGGACATCCAGGTGTTTTACAGGGAGGCCCTGCACATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | AATAATCTCCAGAGCACGGGGGCGGAACCAGAAGAGCAGAAACAATaGGGTCAGGAGTGGAGACAGGAGCTCTTCCAGGAGGGAGACTGC | + |
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Preference number: 5 (lower is better) Translates to: NNLQSTGAEPEEQKQ*GQEWRQELFQEGDC Trigger: GCAGTCTCCCTCCTGGAAGAGCTCCTGTCTCCACTCCTGACCCCATTGTTTCTGCTCTTCTGGTTCCGCCCCCGTGCTCTGGAGATTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTTGGGATGGGCCTGCGTaGAGGGTGTGGTCGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSWDGPA*RVWSGW Trigger: CCACCCCGACCACACCCTCAACGCAGGCCCATCCCA...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | ACTTCCTCCTGCTATCACAGCAGTGCTGACGTCCAAAACCAGCAGCCCTCTCTGATGGATAGGGGAGTCTaGAGACCCCTCAGGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: TSSCYHSSADVQNQQPSLMDRGV*RPLRVT Trigger: TGTGACCCTGAGGGGTCTCAAGACTCCCCTATCCAT...CAGAGAGGGCTGCTGGTTTTGGACGTCAGCACTGCTGTGATAGCAGGAGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGAGCAGCAAGTCCACGTaGAGCGCCAGGCCGCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRSSKST*SARPRL Trigger: CAGCCGCGGCCTGGCGCTCAACGTGGACTTGCTGCT...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | CAACCAGCCAGGCTAGTGTTCTCTTATCCTCACTTGTGGGGCCCATCTGTAGGCGGAACGCCCCTGGCATaGCTCTTCTGGAATGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QPARLVFSYPHLWGPSVGGTPLA*LFWNEG Trigger: TCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCC...GCCTACAGATGGGCCCCACAAGTGAGGATAAGAGAACACTAGCCTGGCTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 90 bp | AGGAGGAAGACCAACAGGGGACTGTCGTGGATCTTCTCTGCACACTaGGCCGAGGGTAGAATGGCATCTGACAAGGTCACTTTGCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: RRKTNRGLSWIFSAH*AEGRMASDKVTLLC Trigger: ACACAGCAAAGTGACCTTGTCAGATGCCATTCTACCCTCGGCCCAGTGTGCAGAGAAGATCCACGACAGTCCCCTGTTGGTCTTCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | TTGACTCCCAGATATGGCCAACTAAAATATCCTGGGCCTGTCATCGGAAATAGGGCAGGCAGCAGACCCTaGTTGGCTAACGCTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: LTPRYGQLKYPGPVIGNRAGSRP*LANATW Trigger: CCAGGTAGCGTTAGCCAACAAGGGTCTGCTGCCTGC...CCTATTTCCGATGACAGGCCCAGGATATTTTAGTTGGCCATATCTGGGAGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | GGAGCTCAGAAGATGGCTTCAAGTGTCCTTCCATGCCACCCATCAAATTTCCTGTCTCCTGAAACCCCTTaGGGAACAGATTCTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GAQKMASSVLPCHPSNFLSPETP*GTDSGP Trigger: GGGCCCAGAATCTGTTCCCAAAGGGGTTTCAGGAGA...CAGGAAATTTGATGGGTGGCATGGAAGGACACTTGAAGCCATCTTCTGAGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | GTGCAGCTCAACCATGAGCAATTTCTGCTGCTTGTTTCGTACAGGATGAGGAGTCAGAGGTGTGTATCATaGTGGGATGGGCCTGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: VQLNHEQFLLLVSYRMRSQRCVS*WDGPAL Trigger: CAACGCAGGCCCATCCCACAATGATACACACCTCTG...ACTCCTCATCCTGTACGAAACAAGCAGCAGAAATTGCTCATGGTTGAGCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 90 bp | CTGCACACTGGGCCGAGGGTAGAATGGCATCTGACAAGGTCACTTTaGTGTGTAATGGTCCACGTCTTGTATGGTTCTTTGGTTGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: LHTGPRVEWHLTRSL*CVMVHVLYGSLVGC Trigger: ACAACCAACCAAAGAACCATACAAGACGTGGACCATTACACAGCAAAGTGACCTTGTCAGATGCCATTCTACCCTCGGCCCAGTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | TCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGTATCTTCCAGGCAGCTGCATCTaGTTGTACCCGGCCCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SYALMDCRLPLTLSLEYLPGSCI*LYPAPK Trigger: CTTCGGGGCCGGGTACAACAAGATGCAGCTGCCTGG...AAGATACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS-3UTR CAA 90 bp | CTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGGATTTACCAAGAGGTaGGCAAGGAAGGCTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LPSSYALMDCRLPLTLSLGFTKR*ARKASG Trigger: GCCAGAAGCCTTCCTTGCCAACCTCTTGGTAAATCC...CAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | AGCGGCCGCGGCTGCACACACAGCCCACCGCTCCTCTaGAGTTCCAGGAGGCGAGACTGCACCTCGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGRGCTHSPPLL*SSRRRDCTSAQ Trigger: CTGGGCCGAGGTGCAGTCTCGCCTCCTGGAACTGCAGAGGAGCGGTGGGCTGTGTGTGCAGCCGCGGCCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 90 bp | CCGCGGAAGAGTGAGAAGGGACCGCGGAAGAGCAGCAAGTCCACGTaGAGCGCCAGGCCGCGGCTGAGGAAGGCGGCGCTGCTCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PRKSEKGPRKSSKST*SARPRLRKAALLPQ Trigger: CTGGGGGAGCAGCGCCGCCTTCCTCAGCCGCGGCCTGGCGCTCAACGTGGACTTGCTGCTCTTCCGCGGTCCCTTCTCACTCTTCCGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | AGTGAGAAGGGACCGCGGAAGAGCAGCAAGTCCACGTaGAGCGCCAGGCCGCGGCTGAGGAAGGCGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEKGPRKSSKST*SARPRLRKAAL Trigger: CAGCGCCGCCTTCCTCAGCCGCGGCCTGGCGCTCAACGTGGACTTGCTGCTCTTCCGCGGTCCCTTCTCACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | AGCCCACCGCTCCTCTGCAGTTCCAGGAGGCGAGACTaGACCTCGGCCCAGGGTACCGAGCTGAGCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SPPLLCSSRRRD*TSAQGTELSSS Trigger: AGAGGAGCTCAGCTCGGTACCCTGGGCCGAGGTGCAGTCTCGCCTCCTGGAACTGCAGAGGAGCGGTGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | AGGCTCCTCTGGGAGGTAATGCATGTGCGCCAGGGCTaGCTGCAGCAGAAGCTGGGAGGAACGCCCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLLWEVMHVRQG*LQQKLGGTPLA Trigger: TGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCAGCCCTGGCGCACATGCATTACCTCCCAGAGGAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 90 bp | CGCCAGGGCTGCCTGCAGCAGAAGCTGGGAGGAACGCCCCTGGCATaGCTCTTCTGGAATGAAGGACCTGGCCACAGTGGCTGTGACCCC | + |
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Preference number: 6 (lower is better) Translates to: RQGCLQQKLGGTPLA*LFWNEGPGHSGCDP Trigger: GGGGTCACAGCCACTGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCAGCCCTGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | TGGCTAACGCTACCTGGTAGTTGGTGTAGCGCAGGATaGGGTGGTGGACGTCCAGTTCCGTCAGCGGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: WLTLPGSWCSAG*GGGRPVPSAAA Trigger: CGCGGCCGCTGACGGAACTGGACGTCCACCACCGCATCCTGCGCTACACCAACTACCAGGTAGCGTTAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | ACCCGGCCCCGAAGGTGTCCAAGGAACTTAGAGCTGTaGCCTGGTGGCTGCCATTGTGGGTGTGCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TRPRRCPRNLEL*PGGCHCGCARE Trigger: CTCCCTGGCACACCCACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCTTGGACACCTTCGGGGCCGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | TGGAGGCTCATCTCAGCAGAGACAAGCTCTGGGAGCTaGGTCAGCTTCTGGCCCCCTGTGCCTCCTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: WRLISAETSSGS*VSFWPPVPPGD Trigger: GTCCCCAGGAGGCACAGGGGGCCAGAAGCTGACCCAGCTCCCAGAGCTTGTCTCTGCTGAGATGAGCCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 90 bp | GAAGCAGCTGCGCCATCTGCCAGTAAGAGCTGGCTCGAGCACCCGTaGCACCAGGCTCCTCTGGGAGGTAATGCATGTGCGCCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EAAAPSASKSWLEHP*HQAPLGGNACAPGL Trigger: CAGCCCTGGCGCACATGCATTACCTCCCAGAGGAGCCTGGTGCAACGGGTGCTCGAGCCAGCTCTTACTGGCAGATGGCGCAGCTGCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | GGTACTGAAGCAGCTGCGCCATCTGCCAGTAAGAGCTaGCTCGAGCACCCGTTGCACCAGGCTCCTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GTEAAAPSASKS*LEHPLHQAPLG Trigger: TCCCAGAGGAGCCTGGTGCAACGGGTGCTCGAGCCAGCTCTTACTGGCAGATGGCGCAGCTGCTTCAGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | GCCCCGAAGGTGTCCAAGGAACTTAGAGCTGTGCCCTaGTGGCTGCCATTGTGGGTGTGCCAGGGAGAACCG | + |
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Preference number: 6 (lower is better) Translates to: APKVSKELRAVP*WLPLWVCQGEP Trigger: CGGTTCTCCCTGGCACACCCACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCTTGGACACCTTCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | GCCTGCAGCAGAAGCTGGGAGGAACGCCCCTGGCATTaGTCTTCTGGAATGAAGGACCTGGCCACAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ACSRSWEERPWH*SSGMKDLATVA Trigger: AGCCACTGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | CACGAGGGGGAAGCAGAGGTGTGTATCATTGTGGGATaGGCCTGCGTTGAGGGTGTGGTCGGGGTGGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: HEGEAEVCIIVG*ACVEGVVGVGK Trigger: CTTACCCACCCCGACCACACCCTCAACGCAGGCCCATCCCACAATGATACACACCTCTGCTTCCCCCTCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | AGGGCTGCCTGCAGCAGAAGCTGGGAGGAACGCCCCTaGCATTGCTCTTCTGGAATGAAGGACCTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RAACSRSWEERP*HCSSGMKDLAT Trigger: TGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | TGCCTGCAGCAGAAGCTGGGAGGAACGCCCCTGGCATaGCTCTTCTGGAATGAAGGACCTGGCCACAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: CLQQKLGGTPLA*LFWNEGPGHSG Trigger: GCCACTGTGGCCAGGTCCTTCATTCCAGAAGAGCAATGCCAGGGGCGTTCCTCCCAGCTTCTGCTGCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | CCGAGTCGAGGGAGCACCCCAGGCAGCTGCATCTTGTaGTACCCGGCCCCGAAGGTGTCCAAGGAACTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSRGSTPGSCIL*YPAPKVSKELR Trigger: TCTAAGTTCCTTGGACACCTTCGGGGCCGGGTACAACAAGATGCAGCTGCCTGGGGTGCTCCCTCGACTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | ACTCCGAGTCGAGGGAGCACCCCAGGCAGCTGCATCTaGTTGTACCCGGCCCCGAAGGTGTCCAAGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: TPSRGSTPGSCI*LYPAPKVSKEL Trigger: AAGTTCCTTGGACACCTTCGGGGCCGGGTACAACAAGATGCAGCTGCCTGGGGTGCTCCCTCGACTCGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS TCA 72 bp | CATGCTCCACGGCCAACACGTCCTCATCGTAGATGGTaGGCACTAGCAGCGCGGCAAAGAGAGCTCCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HAPRPTRPHRRW*ALAARQRELPR Trigger: TCTCGGGAGCTCTCTTTGCCGCGCTGCTAGTGCTCACCATCTACGATGAGGACGTGTTGGCCGTGGAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | CAGAGCACGGGGGCGGAACCAGAAGAGCAGAAACAATaGGGTCAGGAGTGGAGACAGGAGCTCTTCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QSTGAEPEEQKQ*GQEWRQELFQE Trigger: CTCCTGGAAGAGCTCCTGTCTCCACTCCTGACCCCATTGTTTCTGCTCTTCTGGTTCCGCCCCCGTGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | CCGAAGGTGTCCAAGGAACTTAGAGCTGTGCCCTGGTaGCTGCCATTGTGGGTGTGCCAGGGAGAACCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PKVSKELRAVPW*LPLWVCQGEPH Trigger: ATGCGGTTCTCCCTGGCACACCCACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCTTGGACACCTTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | GGGGAAGCAGAGGTGTGTATCATTGTGGGATGGGCCTaGGTTGAGGGTGTGGTCGGGGTGGGTAAGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: GEAEVCIIVGWA*VEGVVGVGKTL Trigger: CAATGTCTTACCCACCCCGACCACACCCTCAACGCAGGCCCATCCCACAATGATACACACCTCTGCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | GCCAGGACTAGGAGGAAGACCAACAGGGGACTGTCGTaGATCTTCTCTGCACACTGGGCCGAGGGTAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: ARTRRKTNRGLS*IFSAHWAEGRM Trigger: CATTCTACCCTCGGCCCAGTGTGCAGAGAAGATCCACGACAGTCCCCTGTTGGTCTTCCTCCTAGTCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | GGAACCGCGGAGTCCTTCGGGTACATGAAGCAAGGGTaGGTGGTCCTCCCCATGGATAGGGGAGTCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTAESFGYMKQG*VVLPMDRGVLR Trigger: TCTCAAGACTCCCCTATCCATGGGGAGGACCACCAACCCTTGCTTCATGTACCCGAAGGACTCCGCGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | TGGGAACAGATTCTGGGCCCTCTGGGTGCCCCACTGTaGTCTTGGGCTAGAAGCAGGACTGGAGCCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: WEQILGPLGAPL*SWARSRTGAIT Trigger: AGTGATGGCTCCAGTCCTGCTTCTAGCCCAAGACAACAGTGGGGCACCCAGAGGGCCCAGAATCTGTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | AGGTGTCCAAGGAACTTAGAGCTGTGCCCTGGTGGCTaGCATTGTGGGTGTGCCAGGGAGAACCGCATTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RCPRNLELCPGG*HCGCARENRIK Trigger: CTTAATGCGGTTCTCCCTGGCACACCCACAATGGCAGCCACCAGGGCACAGCTCTAAGTTCCTTGGACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS TCA 72 bp | GAGAGTGAGGCCTCTGTCTGTCCCTCTGAAAGCCACTaGGGATGCCCGTGGCGCTTCACATCCATTAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESEASVCPSESH*GCPWRFTSINA Trigger: TGCATTAATGGATGTGAAGCGCCACGGGCATCCTCAGTGGCTTTCAGAGGGACAGACAGAGGCCTCACTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | TGTGTATCATTGTGGGATGGGCCTGCGTTGAGGGTGTaGTCGGGGTGGGTAAGACATTGTGTGGAGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CVSLWDGPALRV*SGWVRHCVESE Trigger: CTCAGACTCCACACAATGTCTTACCCACCCCGACCACACCCTCAACGCAGGCCCATCCCACAATGATACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CCA 72 bp | ACCAACAGGGGACTGTCGTGGATCTTCTCTGCACACTaGGCCGAGGGTAGAATGGCATCTGACAAGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: TNRGLSWIFSAH*AEGRMASDKVT Trigger: AGTGACCTTGTCAGATGCCATTCTACCCTCGGCCCAGTGTGCAGAGAAGATCCACGACAGTCCCCTGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | AAGCAGAGGTGTGTATCATTGTGGGATGGGCCTGCGTaGAGGGTGTGGTCGGGGTGGGTAAGACATTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: KQRCVSLWDGPA*RVWSGWVRHCV Trigger: CACACAATGTCTTACCCACCCCGACCACACCCTCAACGCAGGCCCATCCCACAATGATACACACCTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS TCA 72 bp | ATTAAGGAGAGTTCGGTCTTTCCATCCTCTGCACGCTaGGAGAGTGAGGCCTCTGTCTGTCCCTCTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IKESSVFPSSAR*ESEASVCPSES Trigger: GCTTTCAGAGGGACAGACAGAGGCCTCACTCTCTCAGCGTGCAGAGGATGGAAAGACCGAACTCTCCTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 90 bp | TCTGCACACTGGGCCGAGGGTAGAATGGCATCTGACAAGGTCACTTaGCTGTGTAATGGTCCACGTCTTGTATGGTTCTTTGGTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SAHWAEGRMASDKVT*LCNGPRLVWFFGWL Trigger: CAACCAACCAAAGAACCATACAAGACGTGGACCATTACACAGCAAAGTGACCTTGTCAGATGCCATTCTACCCTCGGCCCAGTGTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS GCA 72 bp | GGGCCGAGGGTAGAATGGCATCTGACAAGGTCACTTTaGTGTGTAATGGTCCACGTCTTGTATGGTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GPRVEWHLTRSL*CVMVHVLYGSL Trigger: CAAAGAACCATACAAGACGTGGACCATTACACAGCAAAGTGACCTTGTCAGATGCCATTCTACCCTCGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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| CDS CAA 72 bp | TGGGCCGAGGGTAGAATGGCATCTGACAAGGTCACTTaGCTGTGTAATGGTCCACGTCTTGTATGGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WAEGRMASDKVT*LCNGPRLVWFF Trigger: AAAGAACCATACAAGACGTGGACCATTACACAGCAAAGTGACCTTGTCAGATGCCATTCTACCCTCGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059401.7 |
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