Pregenerated sensors for ATG4D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002820Ensembl transcript IDs: ENSMUST00000065005.5, ENSMUST00000217269.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGCACTGTGGTGCCCTGCGACTTCGGGCTCAGCACAGAGGAGGTTaGGACCAGGGCCGGCAGGGAAAATTGAGGGAGGGGCAAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PHCGALRLRAQHRGG*DQGRQGKLREGQGT Trigger: AGTCCCTTGCCCCTCCCTCAATTTTCCCTGCCGGCCCTGGTCCCAACCTCCTCTGTGCTGAGCCCGAAGTCGCAGGGCACCACAGTGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR TCA 90 bp | GGGCCGGCAGGGAAAATTGAGGGAGGGGCAAGGGACTGGAGGAGGTaGACACCCTCTGTGAAGAGGTCAGACAGGGAGATCTGGAGTTCG | + |
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Preference number: 1 (lower is better) Translates to: GPAGKIEGGARDWRR*TPSVKRSDREIWSS Trigger: CGAACTCCAGATCTCCCTGTCTGACCTCTTCACAGAGGGTGTTCACCTCCTCCAGTCCCTTGCCCCTCCCTCAATTTTCCCTGCCGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | GACTGGAACTGGGACATGTGGGGTGGACCCGAGCAAGATGGGGCCTaGAGCCAACAGGAGCTGCACTGTGAGGACCCTGACTTTAACGTG | + |
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Preference number: 1 (lower is better) Translates to: DWNWDMWGGPEQDGA*SQQELHCEDPDFNV Trigger: CACGTTAAAGTCAGGGTCCTCACAGTGCAGCTCCTGTTGGCTCCAGGCCCCATCTTGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | CTTTGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTaGGGTGGACCCGAGCAAGATGGGGCCTGGAGCCAACAGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LCLSSVEPDDWNWDM*GGPEQDGAWSQQEL Trigger: CAGCTCCTGTTGGCTCCAGGCCCCATCTTGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | GCAGTGCTGGTCTCACTTTGTCTGTCCTCCGTGGAACCAGATGACTaGAACTGGGACATGTGGGGTGGACCCGAGCAAGATGGGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AVLVSLCLSSVEPDD*NWDMWGGPEQDGAW Trigger: CCAGGCCCCATCTTGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACAAAGTGAGACCAGCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR TCA 90 bp | CAGTGCAGTGCTGGTCTCACTTTGTCTGTCCTCCGTGGAACCAGATaGCTGGAACTGGGACATGTGGGGTGGACCCGAGCAAGATGGGGC | + |
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Preference number: 1 (lower is better) Translates to: QCSAGLTLSVLRGTR*LELGHVGWTRARWG Trigger: GCCCCATCTTGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACAAAGTGAGACCAGCACTGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | AGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTaGTGCCCTGCGACTTCGGGCTCAGCACAGAGGAGGTTGGGACCA | + |
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Preference number: 1 (lower is better) Translates to: RTLSTTCPVVSSTAL*CPATSGSAQRRLGP Trigger: TGGTCCCAACCTCCTCTGTGCTGAGCCCGAAGTCGCAGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | TGGTGCAGTGCAGTGCAGTGCTGGTCTCACTTTGTCTGTCCTCCGTaGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCGAGC | + |
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Preference number: 1 (lower is better) Translates to: WCSAVQCWSHFVCPP*NQMTGTGTCGVDPS Trigger: GCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACAAAGTGAGACCAGCACTGCACTGCACTGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR GCA 90 bp | GCTGAGACCTTAGTATCCAAGGAAGAGGGGTTGGCCCACACATCCTaGCCAGAGAAGCCAGCATCCCAGAAGCAGAAGAGCAAGAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: AETLVSKEEGLAHTS*PEKPASQKQKSKKA Trigger: GGCCTTCTTGCTCTTCTGCTTCTGGGATGCTGGCTTCTCTGGGCAGGATGTGTGGGCCAACCCCTCTTCCTTGGATACTAAGGTCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR TCA 90 bp | AAATTGAGGGAGGGGCAAGGGACTGGAGGAGGTGAACACCCTCTGTaGAGAGGTCAGACAGGGAGATCTGGAGTTCGGTGCTGTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: KLREGQGTGGGEHPL*RGQTGRSGVRCCLC Trigger: ACAGAGACAGCACCGAACTCCAGATCTCCCTGTCTGACCTCTTCACAGAGGGTGTTCACCTCCTCCAGTCCCTTGCCCCTCCCTCAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR GCA 90 bp | TCCTGTAGCTGTCGGTGCTGCTGCCCCTTAGGCCTGCCCTTCCCTTaGAGAAATGTTTTGGAGATGCCTTCTATGGTACTGCGGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCSCRCCCPLGLPFP*RNVLEMPSMVLRRK Trigger: CTTCCTCCGCAGTACCATAGAAGGCATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCCTAAGGGGCAGCAGCACCGACAGCTACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | GACACTTGGAGGTCACAAGTTCAGCAGACAGAGATTGCAGGCCTTTaGTCTCAACCCCAAAAGGCTGCACTTCCGCCAGTTAGGCCGCCA | + |
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Preference number: 1 (lower is better) Translates to: DTWRSQVQQTEIAGL*SQPQKAALPPVRPP Trigger: TGGCGGCCTAACTGGCGGAAGTGCAGCCTTTTGGGGTTGAGACCAAAGGCCTGCAATCTCTGTCTGCTGAACTTGTGACCTCCAAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | CTGAGGCCATCTGGGTTCTGTAGTGAGACAACAAGACCAGGGTTTTaGCTGAGTGGGCAGAGTGCTTCCGTGGCATGTCTAATGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LRPSGFCSETTRPGF*LSGQSASVACLMAW Trigger: CCAGGCCATTAGACATGCCACGGAAGCACTCTGCCCACTCAGCCAAAACCCTGGTCTTGTTGTCTCACTACAGAACCCAGATGGCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | GGAGGCAGGATGGGGTTCACGAGTTTGTTGAGTGTGAAGCCAGCCTaGGCTCCACAGCAACACCCTGCCTTTGCAGGATGTAAAGATTGT | + |
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Preference number: 1 (lower is better) Translates to: GGRMGFTSLLSVKPA*APQQHPAFAGCKDC Trigger: ACAATCTTTACATCCTGCAAAGGCAGGGTGTTGCTGTGGAGCCCAGGCTGGCTTCACACTCAACAAACTCGTGAACCCCATCCTGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR TCA 90 bp | AAACCCCTGAAGAGCTCTGAGTTCAAGGCCAGTGTGGTCTTACAGTaGGTTCCGGCACAGCCAGAGCTACATAGTGAGGCTGTATCACTC | + |
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Preference number: 1 (lower is better) Translates to: KPLKSSEFKASVVLQ*VPAQPELHSEAVSL Trigger: GAGTGATACAGCCTCACTATGTAGCTCTGGCTGTGCCGGAACTCACTGTAAGACCACACTGGCCTTGAACTCAGAGCTCTTCAGGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | CTGCATCTTTATCAGCCACAGTCAGTTCTCCCAGGACAGGACCTTTaGGACCTTGGGACCAGTGACCCAATGCAGGCTACAGAACTTGAA | + |
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Preference number: 1 (lower is better) Translates to: LHLYQPQSVLPGQDL*DLGTSDPMQATELE Trigger: TTCAAGTTCTGTAGCCTGCATTGGGTCACTGGTCCCAAGGTCCCAAAGGTCCTGTCCTGGGAGAACTGACTGTGGCTGATAAAGATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR TCA 90 bp | GTGATGGCAGGGTCTGAATCCTACAGAGATGTAGTAGCTGTTGTGTaGAACCACTGCACCCTAAACAGGAGGTGCTGTGGAAGGTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: VMAGSESYRDVVAVV*NHCTLNRRCCGRSQ Trigger: CTGAGACCTTCCACAGCACCTCCTGTTTAGGGTGCAGTGGTTTCACACAACAGCTACTACATCTCTGTAGGATTCAGACCCTGCCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR GCA 90 bp | ACCTGTATAGACTCAGGGATCATGGTAGCCATGGAGACCCGTGGCTaGAGTGTCCTTGTAGAATCACAACTGTGGCTCAGATATGGATTG | + |
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Preference number: 1 (lower is better) Translates to: TCIDSGIMVAMETRG*SVLVESQLWLRYGL Trigger: CAATCCATATCTGAGCCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCCTGAGTCTATACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | GTATACCTGTATAGACTCAGGGATCATGGTAGCCATGGAGACCCGTaGCTGCAGTGTCCTTGTAGAATCACAACTGTGGCTCAGATATGG | + |
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Preference number: 1 (lower is better) Translates to: VYLYRLRDHGSHGDP*LQCPCRITTVAQIW Trigger: CCATATCTGAGCCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCCTGAGTCTATACAGGTATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | CACACAGGAGACCATTTCTTGGAAGACTCAGGAGCCACACAAAGTTaGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: HTGDHFLEDSGATQS*VCWHELRILALESL Trigger: CAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTGTGTGGCTCCTGAGTCTTCCAAGAAATGGTCTCCTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR TCA 90 bp | ATGTCTAATGGCCTGGGCTCTATGTTAGCACTGTATAAAAACCCCTaGAGAGCTCTGAGTTCAAGGCCAGTGTGGTCTTACAGTGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: MSNGLGSMLALYKNP*RALSSRPVWSYSEF Trigger: GAACTCACTGTAAGACCACACTGGCCTTGAACTCAGAGCTCTTCAGGGGTTTTTATACAGTGCTAACATAGAGCCCAGGCCATTAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CCA 90 bp | AGCATATGCAAATTCTTTATTATGTGCACGATAGGCCTAAAGAGATaGCTCAGCCTTAAAGCGTATTGGCTATTCTTCCAGAAGACCAAC | + |
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Preference number: 1 (lower is better) Translates to: SICKFFIMCTIGLKR*LSLKAYWLFFQKTN Trigger: GTTGGTCTTCTGGAAGAATAGCCAATACGCTTTAAGGCTGAGCCATCTCTTTAGGCCTATCGTGCACATAATAAAGAATTTGCATATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCAACCCCAAAAGGCTGCACTTCCGCCAGTTAGGCCGCCAACGGAAGAAAGGGAGGACGGGGACATaGGGACAGGGGTCCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: GLNPKRLHFRQLGRQRKKGRTGT*GQGSST Trigger: GGTGCTGGACCCCTGTCCTCATGTCCCCGTCCTCCC...TTTCTTCCGTTGGCGGCCTAACTGGCGGAAGTGCAGCCTTTTGGGGTTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCCCCACTCTCCTTCCCTaGCTCCTGAGGAGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLSSVEPDDWNWDMWGGPPTLLP*LLRRQG Trigger: CCCCTGCCTCCTCAGGAGCCAGGGAAGGAGAGTGGG...GGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACTGGGCCGGGGAGGGTaGCAGCAGCCCATGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GIMVAMETRGCSVLVESQLGRGG*QQPMEL Trigger: CAGCTCCATGGGCTGCTGCCACCCTCCCCGGCCCAG...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCGAATTAGGCCCTGAGTaGGTGCCCTGGAGCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: CLSSVEPDDWNWDMWGGPELGPE*VPWSPL Trigger: GAGTGGGCTCCAGGGCACTCACTCAGGGCCTAATTC...GGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCACCTGCATGTACAGGTaGCAGCAGGGAGGTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CLSSVEPDDWNWDMWGGPTCMYR*QQGGGG Trigger: TCCCCCACCTCCCTGCTGTCACCTGTACATGCAGGT...GGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CAA 90 bp | TTCGTGAGGCCCCCACCTCAGGCAAGAGAAAGCGCAAGTCTCCATTaGCAGCTGCAGTGGGGCAGGAGAAGCCCATGTTTGACCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: FVRPPPQARESASLH*QLQWGRRSPCLTLV Trigger: CACCAGGGTCAAACATGGGCTTCTCCTGCCCCACTGCAGCTGCAAATGGAGACTTGCGCTTTCTCTTGCCTGAGGTGGGGGCCTCACGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCTTGGCCCACACATCCTaGCCAGAGAAGCCAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: CLSSVEPDDWNWDMWGGPLAHTS*PEKPAS Trigger: GGATGCTGGCTTCTCTGGGCAGGATGTGTGGGCCAA...GGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CAA 90 bp | CAGAAGACACCCCAGGCTGAGACCTTAGTATCCAAGGAAGAGGGGTaGGCCCACACATCCTGCCCAGAGAAGCCAGCATCCCAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QKTPQAETLVSKEEG*AHTSCPEKPASQKQ Trigger: CTGCTTCTGGGATGCTGGCTTCTCTGGGCAGGATGTGTGGGCCAACCCCTCTTCCTTGGATACTAAGGTCTCAGCCTGGGGTGTCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | CGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCGGACCTTGGGACCAGTaGCCCAATGCAGGCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: RGHYRRPALSFQVPHCGAGPWDQ*PNAGYR Trigger: TCTGTAGCCTGCATTGGGTCACTGGTCCCAAGGTCC...GGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | CGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCTGCTGGGTCCCACGGTaGCACTTGGAGGTCACAAGT | + |
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Preference number: 2 (lower is better) Translates to: RGHYRRPALSFQVPHCGACWVPR*HLEVTS Trigger: ACTTGTGACCTCCAAGTGTCACCGTGGGACCCAGCA...GGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | CGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCAGGGACTGGAGGAGGTaGACACCCTCTGTGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGHYRRPALSFQVPHCGARDWRR*TPSVKR Trigger: CCTCTTCACAGAGGGTGTTCACCTCCTCCAGTCCCT...GGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | GTATCCAAGGAAGAGGGGTTGGCCCACACATCCTGCCCAGAGAAGCCAGCATCCCTGCTGACCAAACTCTaGCTGGCAGCCTACGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VSKEEGLAHTSCPEKPASLLTKL*LAAYES Trigger: GCTTTCGTAGGCTGCCAGGCAGAGTTTGGTCAGCAG...GGATGCTGGCTTCTCTGGGCAGGATGTGTGGGCCAACCCCTCTTCCTTGGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCCCTACGAAAGCTACCTaGAGGAGAGGGCACTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HGMMGQCASWGFEHILPGPTKAT*RRGHCC Trigger: ACAGCAGTGCCCTCTCCTGCAGGTAGCTTTCGTAGG...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACTGTGGTCCTGTAGCTGTCGGTaGTGCTGCCCCTTAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: MVAMETRGCSVLVESQLWSCSCR*CCPLGL Trigger: CAGGCCTAAGGGGCAGCAGCACCGACAGCTACAGGA...CCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCACAAGACCAGGGTTTTaGCTGAGTGGGCAGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CLSSVEPDDWNWDMWGGPTRPGF*LSGQSA Trigger: AGCACTCTGCCCACTCAGCCAAAACCCTGGTCTTGT...GGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | CGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTACAACTAAGCTGCTaGCCAAACTCTGCCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RGHYRRPALSFQVPHCGALQLSC*PNSAWQ Trigger: CTGCCAGGCAGAGTTTGGTCAGCAGCTTAGTTGTAG...GGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACTGTGGAGGTCTCAGCTGTGTTaGGGAGGACGGGGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: MVAMETRGCSVLVESQLWRSQLC*GGRGHE Trigger: CTCATGTCCCCGTCCTCCCCAACACAGCTGAGACCT...CCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACCAGGACAGGACCTTTaGGACCTTGGGACCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GIMVAMETRGCSVLVESQPGQDL*DLGTSD Trigger: GTCACTGGTCCCAAGGTCCCAAAGGTCCTGTCCTGG...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR TCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAAACCCCTGAAGAGCTCTaGGTTCAAGGCCAGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GIMVAMETRGCSVLVESQTPEEL*VQGQCG Trigger: ACCACACTGGCCTTGAACTCAGAGCTCTTCAGGGGT...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR CAA 90 bp | TCAGTCCCTCTTGGTGAGGGGTCATCATGGTTCAGACTTGAGAGATaGAGGGCATGCCTGCAGCACTCAGATAAAGGGTCAGGAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: SVPLGEGSSWFRLER*RACLQHSDKGSGGL Trigger: CAGTCCTCCTGACCCTTTATCTGAGTGCTGCAGGCATGCCCTCAATCTCTCAAGTCTGAACCATGATGACCCCTCACCAAGAGGGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCGGACCAGTGACCCAATaGAGGCTACAGAACTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HGMMGQCASWGFEHILPGGPVTQ*RLQNLN Trigger: ATTCAAGTTCTGTAGCCTGCATTGGGTCACTGGTCC...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCGAGAGATTGAGGGCATaGCTGCAGCACTCAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: HGMMGQCASWGFEHILPGERLRA*LQHSDK Trigger: TTTATCTGAGTGCTGCAGGCATGCCCTCAATCTCTC...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGCGGAGCAGGAGGAGATaGAGGAGCAGCGGGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: QSWVCWHELRILALESLRRSRRR*RSSGCT Trigger: TGTACACCCGCTGCTCCTGCATCTCCTCCTGCTCCG...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAGGCCTGCCCTTCCCTTGCAGAAATGTTTTGGAGATGCCTTCTATGGTAAGTGTGAAGCCAGCCTaGGCTCCACAGCAACACCCT | + |
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Preference number: 2 (lower is better) Translates to: PLGLPFPCRNVLEMPSMVSVKPA*APQQHP Trigger: AGGGTGTTGCTGTGGAGCCCAGGCTGGCTTCACACT...TACCATAGAAGGCATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCCTAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| 3UTR-3UTR CCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCAAGGAACTGAATCGCTaGTGTTCCCTGAAGAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: HGMMGQCASWGFEHILPGKELNR*CSLKKT Trigger: GGTCTTCTTCAGGGAACACCAGCGATTCAGTTCCTT...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCACTTACCACACTTGGGTGGAAGCAAATGGATCACAATGTCAAGGCTAGCGAGCAAGATGGGGCCTaGAGCCAACAGGAGCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SALTTLGWKQMDHNVKASEQDGA*SQQELH Trigger: GTGCAGCTCCTGTTGGCTCCAGGCCCCATCTTGCTC...GCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCACTTACCACACTTGGGTGGAAGCAAATGGATCACAATGTCAAGGCTAGCGAGTTGTGCTGGCATTaGCATGGGGCGGCTGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SALTTLGWKQMDHNVKASELCWH*HGAAEL Trigger: GAGCTCAGCCGCCCCATGCCAATGCCAGCACAACTC...GCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 90 bp | AACAGGAGGTGCTGTGGAAGGTCTCAGCACACAGGAGACCATTTCTaGGAAGACTCAGGAGCCACACAAAGTTGGGTGTGTTGGCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: NRRCCGRSQHTGDHF*EDSGATQSWVCWHE Trigger: CTCATGCCAACACACCCAACTTTGTGTGGCTCCTGAGTCTTCCAAGAAATGGTCTCCTGTGTGCTGAGACCTTCCACAGCACCTCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTATCATGGTTCAGACTTaGGAGATTGAGGGCATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RTLSTTCPVVSSTALWCPIMVQT*EIEGMP Trigger: AGGCATGCCCTCAATCTCTCAAGTCTGAACCATGAT...AGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAATGTCTTGTACAAGGCTaGGTTGTGCTGGCATTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GIMVAMETRGCSVLVESQCLVQG*VVLALA Trigger: TGCCAATGCCAGCACAACTCAGCCTTGTACAAGACA...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR GCA 90 bp | ATCACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTGTCTCCATTTGCAGCTaGAGTGGGGCAGGAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ITTVAQIWIVVLGVVPGFVSICS*SGAGEA Trigger: GGCTTCTCCTGCCCCACTGCAGCTGCAAATGGAGAC...AAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAAGCTGTTCCTAAGCTTTaGAATGAGGCTACCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GIMVAMETRGCSVLVESQAVPKL*NEATRA Trigger: TGCTCTGGTAGCCTCATTTCAAAGCTTAGGAACAGC...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAATGTTTAGAACTGGCCTaGTCTGACCTGCTCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GIMVAMETRGCSVLVESQCLELA*SDLLFL Trigger: CAGAAAGAGCAGGTCAGATCAGGCCAGTTCTAAACA...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTGGTCAACCTGGGGAAACATaGAGTAGCTCGCAGCAATTT | + |
|
Preference number: 2 (lower is better) Translates to: EMVASPAEVNSGDLAEAGQPGET*SSSQQF Trigger: AAATTGCTGCGAGCTACTCCATGTTTCCCCAGGTTG...ACCAGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTAAACAGGAGGTGCTGTaGAAGGTCTCAGCACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ITTVAQIWIVVLGVVPGFKQEVL*KVSAHR Trigger: CCTGTGTGCTGAGACCTTCCACAGCACCTCCTGTTT...AAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTTGGAGCTTCTTAATTCCTTCCCTGGCTCCTaGGGAGGCAGGGGCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: IVCLFKTCVCVVLLELLNSFPGS*GGRGSW Trigger: CCAGCTGCCCCTGCCTCCTCAGGAGCCAGGGAAGGA...ATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | ATCACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTGCACAAGGAGTTGACTaGCATAAATGGCTTCCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ITTVAQIWIVVLGVVPGFAQGVD*HKWLPL Trigger: CAGCGGAAGCCATTTATGTCAGTCAACTCCTTGTGC...AAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTTTGTCAGCAGACAGAGATTaGAGGCCTTTGGTCTCAACC | + |
|
Preference number: 2 (lower is better) Translates to: TTVAQIWIVVLGVVPGFLSADRD*RPLVST Trigger: GGTTGAGACCAAAGGCCTGCAATCTCTGTCTGCTGA...CAAAAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGGGCCTGCCCTTCCCTTaGAGAAATGTTTTGGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: QSWVCWHELRILALESLRGLPFP*RNVLEM Trigger: CATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCC...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTACTACCGTCTGGACTACGAGGACATTATCGACGACCTGCCCTGTCGTTTCAACAAAAAGGGCAGAGTaGGGGAAATCCTTTCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: STTVWTTRTLSTTCPVVSTKRAE*GKSFLN Trigger: GTTCAGAAAGGATTTCCCCCACTCTGCCCTTTTTGT...TGAAACGACAGGGCAGGTCGTCGATAATGTCCTCGTAGTCCAGACGGTAGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGACATGTTCCAAGCCTTaGCCGCAGAGCACATTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QSWVCWHELRILALESLRTCSKP*PQSTFE Trigger: CTCAAATGTGCTCTGCGGCCAAGGCTTGGAACATGT...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTAGGCCTGCCCTTCCCTTGCAGAAATGTTTTGGAGATGCCTTCTATGGTACTGTATAAAAACCCCTaGAGAGCTCTGAGTTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLGLPFPCRNVLEMPSMVLYKNP*RALSSR Trigger: CCTTGAACTCAGAGCTCTTCAGGGGTTTTTATACAG...TACCATAGAAGGCATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCCTAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | ATCACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTAGAACTGGCCTGATCTaGCCTGCTCTTTCTGATAGA | + |
|
Preference number: 2 (lower is better) Translates to: ITTVAQIWIVVLGVVPGFRTGLI*PALSDR Trigger: TCTATCAGAAAGAGCAGGTCAGATCAGGCCAGTTCT...AAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCACGAGTTTGTTGAGTGTGAAGCCAGCCTGGGCTCCACAGCAACACCCTGCCTGTATCACTCCATCCTaGTTTAAAAATAGTTACAGG | + |
|
Preference number: 2 (lower is better) Translates to: FTSLLSVKPAWAPQQHPACITPS*FKNSYR Trigger: CCTGTAACTATTTTTAAAGCAGGATGGAGTGATACA...GGCAGGGTGTTGCTGTGGAGCCCAGGCTGGCTTCACACTCAACAAACTCGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGTACATAGAGTTTAAGGCCAGTCATGAACCCCCTTCTCAAACAAAAAGGGCAGAGATTGCAGGCCTTTaGTCTCAACCCCAAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GYIEFKASHEPPSQTKRAEIAGL*SQPQKA Trigger: AGCCTTTTGGGGTTGAGACCAAAGGCCTGCAATCTC...TGCCCTTTTTGTTTGAGAAGGGGGTTCATGACTGGCCTTAAACTCTATGTACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTAGGCCTGCCCTTCCCTTGCAGAAATGTTTTGGAGATGCCTTCTATGGTATTTCTCCCTGTAGGATaGAAATGTCCACAGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLGLPFPCRNVLEMPSMVFLPVG*KCPQKP Trigger: TGGCTTCTGTGGACATTTCCATCCTACAGGGAGAAA...TACCATAGAAGGCATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCCTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGAAGGCCCAGAACATGTaGAAGAAGAGGCAGATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QSWVCWHELRILALESLRKAQNM*KKRQIF Trigger: GAAGATCTGCCTCTTCTTCCACATGTTCTGGGCCTT...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTTTGTGGAGATGCCTTCTATaGTACTGCGGAGGAAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TTVAQIWIVVLGVVPGFLWRCLL*YCGGRE Trigger: TTCTCTTCCTCCGCAGTACCATAGAAGGCATCTCCA...CAAAAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR GCA 90 bp | GACTTTTCTCCCTGTAGGATGGAAATGTCCACAGAAGCCACAGGAAAGTCACAGAGGCATGTTCAAGTCTaGATCTTTATCAGCCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: DFSPCRMEMSTEATGKSQRHVQV*IFISHS Trigger: ACTGTGGCTGATAAAGATGCAGACTTGAACATGCCT...CTGTGACTTTCCTGTGGCTTCTGTGGACATTTCCATCCTACAGGGAGAAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 90 bp | CTCAATAAAGCAAAAACCTCATTCACACGTCTGCACTTACCACACTaGGGTGGAAGCAAATGGATCACAATGTCAAGGCTAGCCTATGGT | + |
|
Preference number: 2 (lower is better) Translates to: LNKAKTSFTRLHLPH*GGSKWITMSRLAYG Trigger: ACCATAGGCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGACGTGTGAATGAGGTTTTTGCTTTATTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTTGGAGCTTCTTAATTCTCCACAGACAGCCTaGAATGTCAACAACGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IVCLFKTCVCVVLLELLNSPQTA*NVNNAR Trigger: CCTGGCGTTGTTGACATTTCAGGCTGTCTGTGGAGA...ATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | ATTGGCATGGGGCGGCTGAGCTCCTGTAGCTGTCGGTaGTGCTGCCCCTTAGGCCTGCCCTTCCCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IGMGRLSSCSCR*CCPLGLPFPCR Trigger: TCTGCAAGGGAAGGGCAGGCCTAAGGGGCAGCAGCACCGACAGCTACAGGAGCTCAGCCGCCCCATGCCAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | CTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTaGGACTTCGGGCTCAGCACAGAGGAGGTTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LPCRFKYRTVVP*DFGLSTEEVGT Trigger: GGTCCCAACCTCCTCTGTGCTGAGCCCGAAGTCGCAGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | TCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTaGTGCCCTGCGACTTCGGGCTCAGCACAGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: STTCPVVSSTAL*CPATSGSAQRR Trigger: CCTCCTCTGTGCTGAGCCCGAAGTCGCAGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | ACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTaGCCTGCGACTTCGGGCTCAGCACAGAGGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TTCPVVSSTALW*PATSGSAQRRL Trigger: CAACCTCCTCTGTGCTGAGCCCGAAGTCGCAGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | TCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTaGGGTGGACCCGAGCAAGATGGGGCCTGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSVEPDDWNWDM*GGPEQDGAWSQ Trigger: TTGGCTCCAGGCCCCATCTTGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GAGGGGCAAGGGACTGGAGGAGGTGAACACCCTCTGTaGAGAGGTCAGACAGGGAGATCTGGAGTTCGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGQGTGGGEHPL*RGQTGRSGVRC Trigger: GCACCGAACTCCAGATCTCCCTGTCTGACCTCTTCACAGAGGGTGTTCACCTCCTCCAGTCCCTTGCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGATGCAGACTATGACCCCAGCCAACCACGGAAGAAGCTTCGTGAGGCCCCCAAACAAGACCAGGGTTTaGGCTGAGTGGGCAGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WMQTMTPANHGRSFVRPPNKTRV*AEWAEC Trigger: GCACTCTGCCCACTCAGCCAAAACCCTGGTCTTGTT...TGGGGGCCTCACGAAGCTTCTTCCGTGGTTGGCTGGGGTCATAGTCTGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GCTGGTCTCACTTTGTCTGTCCTCCGTGGAACCAGATaGCTGGAACTGGGACATGTGGGGTGGACCCGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AGLTLSVLRGTR*LELGHVGWTRA Trigger: TGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACAAAGTGAGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | CAAGAAGGCCAGGCTGCTGGGTCCCACGGTGACACTTaGAGGTCACAAGTTCAGCAGACAGAGATTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QEGQAAGSHGDT*RSQVQQTEIAG Trigger: GCCTGCAATCTCTGTCTGCTGAACTTGTGACCTCCAAGTGTCACCGTGGGACCCAGCAGCCTGGCCTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGTCCTCCGTGGAACCAGATGACTGGAACTGGGACATGTGGGGTGGACCCAGAGATTGCAGGCCTTaGGTCTCAACCCCAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CLSSVEPDDWNWDMWGGPRDCRP*VSTPKG Trigger: GCCTTTTGGGGTTGAGACCAAAGGCCTGCAATCTCT...GGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | CCACAGGGAGCCAACCTGCCTCTACAACTAAGCTGCTaGCCAAACTCTGCCTGGCAGCCTACGAAAGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: PQGANLPLQLSC*PNSAWQPTKAT Trigger: GGTAGCTTTCGTAGGCTGCCAGGCAGAGTTTGGTCAGCAGCTTAGTTGTAGAGGCAGGTTGGCTCCCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GCATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTaGACACATACTACCCGGCTGTGCATCTCCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AWHDGAVCLMGL*THTTRLCISCA Trigger: TGCACAGGAGATGCACAGCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | GGTGAGGTGCATGGCATGATGGGGCAGTGTGCCTCATaGGGCTTTGAACACATACTACCCGGCTGTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: GEVHGMMGQCAS*GFEHILPGCAS Trigger: AGATGCACAGCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATGCACCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAAGGCCGCAGAGCACATTaGAGGCCAGCATGGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GIMVAMETRGCSVLVESQGRRAH*RPAWVV Trigger: TACAACCCATGCTGGCCTCAAATGTGCTCTGCGGCC...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | AGAAGCCCATGTTTGACCCTGGTGAGGTGCATGGCATaGTGGGGCAGTGTGCCTCATGGGGCTTTGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: RSPCLTLVRCMA*WGSVPHGALNT Trigger: TGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATGCACCTCACCAGGGTCAAACATGGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | CAACCTGCCTCTACAACTAAGCTGCTGACCAAACTCTaGCTGGCAGCCTACGAAAGCTACCTGCAGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPASTTKLLTKL*LAAYESYLQER Trigger: CCTCTCCTGCAGGTAGCTTTCGTAGGCTGCCAGGCAGAGTTTGGTCAGCAGCTTAGTTGTAGAGGCAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | GACAACAAGACCAGGGTTTTGGCTGAGTGGGCAGAGTaGTTCCGTGGCATGTCTAATGGCCTGGGCTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: DNKTRVLAEWAE*FRGMSNGLGSM Trigger: CATAGAGCCCAGGCCATTAGACATGCCACGGAAGCACTCTGCCCACTCAGCCAAAACCCTGGTCTTGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | CATGCCTGCAGCACTCAGATAAAGGGTCAGGAGGACTaGACCCTGGTGCACATCTGTAACCCCAGCATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HACSTQIKGQED*TLVHICNPSIR Trigger: CCTAATGCTGGGGTTACAGATGTGCACCAGGGTGCAGTCCTCCTGACCCTTTATCTGAGTGCTGCAGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | ACTACCGTCTGGACTACGAGGACATTATCGACGACCTaGCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TTVWTTRTLSTT*PVVSSTALWCP Trigger: AGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCGTAGTCCAGACGGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | ATGGGGTTCACGAGTTTGTTGAGTGTGAAGCCAGCCTaGGCTCCACAGCAACACCCTGCCTTTGCAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: MGFTSLLSVKPA*APQQHPAFAGC Trigger: ACATCCTGCAAAGGCAGGGTGTTGCTGTGGAGCCCAGGCTGGCTTCACACTCAACAAACTCGTGAACCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | AGAGGCCAGTCAGTCCCTCTTGGTGAGGGGTCATCATaGTTCAGACTTGAGAGATTGAGGGCATGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGQSVPLGEGSS*FRLERLRACLQ Trigger: CTGCAGGCATGCCCTCAATCTCTCAAGTCTGAACCATGATGACCCCTCACCAAGAGGGACTGACTGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | GTCTCACTTTGTCTGTCCTCCGTGGAACCAGATGACTaGAACTGGGACATGTGGGGTGGACCCGAGCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VSLCLSSVEPDD*NWDMWGGPEQD Trigger: ATCTTGCTCGGGTCCACCCCACATGTCCCAGTTCCAGTCATCTGGTTCCACGGAGGACAGACAAAGTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAAGTGCCTCATGGGGCTTaGAACACATACTACCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GIMVAMETRGCSVLVESQVPHGA*NTYYPA Trigger: AGCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCAC...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | GACTCAGGGATCATGGTAGCCATGGAGACCCGTGGCTaGAGTGTCCTTGTAGAATCACAACTGTGGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSGIMVAMETRG*SVLVESQLWLR Trigger: TCTGAGCCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCCTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGTCCAAGGAAGAGGGGTaGGCCCACACATCCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QSWVCWHELRILALESLRSKEEG*AHTSCP Trigger: TGGGCAGGATGTGTGGGCCAACCCCTCTTCCTTGGA...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCAGCAACACCCTGCCTTaGCAGGATGTAAAGATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HGMMGQCASWGFEHILPGSNTLP*QDVKIV Trigger: CACAATCTTTACATCCTGCAAAGGCAGGGTGTTGCT...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAATTCAGACTTGAGAGATaGAGGGCATGCCTGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GIMVAMETRGCSVLVESQFRLER*RACLQH Trigger: GTGCTGCAGGCATGCCCTCAATCTCTCAAGTCTGAA...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GAGGCTACCAGAGCACTGTCTTCTCCACAGACAGCCTaGAATGTCAACAACGCCAGGCATGTTCAAGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EATRALSSPQTA*NVNNARHVQVC Trigger: GCAGACTTGAACATGCCTGGCGTTGTTGACATTTCAGGCTGTCTGTGGAGAAGACAGTGCTCTGGTAGCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | AAGAGCTCTGAGTTCAAGGCCAGTGTGGTCTTACAGTaGGTTCCGGCACAGCCAGAGCTACATAGTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KSSEFKASVVLQ*VPAQPELHSEA Trigger: AGCCTCACTATGTAGCTCTGGCTGTGCCGGAACTCACTGTAAGACCACACTGGCCTTGAACTCAGAGCTCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | AGGTCACAAGTTCAGCAGACAGAGATTGCAGGCCTTTaGTCTCAACCCCAAAAGGCTGCACTTCCGCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSQVQQTEIAGL*SQPQKAALPPV Trigger: AACTGGCGGAAGTGCAGCCTTTTGGGGTTGAGACCAAAGGCCTGCAATCTCTGTCTGCTGAACTTGTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | TCTGGGTTCTGTAGTGAGACAACAAGACCAGGGTTTTaGCTGAGTGGGCAGAGTGCTTCCGTGGCATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SGFCSETTRPGF*LSGQSASVACL Trigger: TAGACATGCCACGGAAGCACTCTGCCCACTCAGCCAAAACCCTGGTCTTGTTGTCTCACTACAGAACCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACTGTGGTTCAGCAGACAGAGATaGCAGGCCTTTGGTCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: MVAMETRGCSVLVESQLWFSRQR*QAFGLN Trigger: GTTGAGACCAAAGGCCTGCAATCTCTGTCTGCTGAA...CCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTGTCTGTGTAGTCCTCTaGGAGCTTCTTAATGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTLSTTCPVVSSTALWCPVCVVL*ELLNVG Trigger: ACCTACATTAAGAAGCTCCAAGAGGACTACACAGAC...AGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | TCTTCTGGTAGGCCCGCAATAGATGTGTTTCTGTGGTaGTGTGCCCAGCCCCAACTGCCATGTAATTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSGRPAIDVFLW*CAQPQLPCNCE Trigger: CTCACAATTACATGGCAGTTGGGGCTGGGCACATCACCACAGAAACACATCTATTGCGGGCCTACCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | TATAGACTCAGGGATCATGGTAGCCATGGAGACCCGTaGCTGCAGTGTCCTTGTAGAATCACAACTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YRLRDHGSHGDP*LQCPCRITTVA Trigger: AGCCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCCTGAGTCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GGCCTGGGCTCTATGTTAGCACTGTATAAAAACCCCTaGAGAGCTCTGAGTTCAAGGCCAGTGTGGTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GLGSMLALYKNP*RALSSRPVWSY Trigger: GTAAGACCACACTGGCCTTGAACTCAGAGCTCTTCAGGGGTTTTTATACAGTGCTAACATAGAGCCCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GGGGTCTGGATGCTCCAGAAGTGTTTAGAACTGGCCTaGTCTGACCTGCTCTTTCTGATAGATGGATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GVWMLQKCLELA*SDLLFLIDGCR Trigger: TCTGCATCCATCTATCAGAAAGAGCAGGTCAGATCAGGCCAGTTCTAAACACTTCTGGAGCATCCAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GGGTCTGAATCCTACAGAGATGTAGTAGCTGTTGTGTaGAACCACTGCACCCTAAACAGGAGGTGCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GSESYRDVVAVV*NHCTLNRRCCG Trigger: TCCACAGCACCTCCTGTTTAGGGTGCAGTGGTTTCACACAACAGCTACTACATCTCTGTAGGATTCAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GGGTTTTTGTGTGTATTGGGACAGCATCCTATCACCTaGGTTCCAGGCTCAGGCTCATTTTGTAGTCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GFLCVLGQHPIT*VPGSGSFCSPG Trigger: GCCTGGACTACAAAATGAGCCTGAGCCTGGAACTCAGGTGATAGGATGCTGTCCCAATACACACAAAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTCTGCACTTACCACACTaGGGTGGAAGCAAATGGATC | + |
|
Preference number: 3 (lower is better) Translates to: ITTVAQIWIVVLGVVPGFLHLPH*GGSKWI Trigger: GATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAG...AAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | GACATGGCAGCTGCACTAAAGGCACAAGGAGTTGACTaGCATAAATGGCTTCCGCTGGTCCAACTAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DMAAALKAQGVD*HKWLPLVQLIC Trigger: ACAGATTAGTTGGACCAGCGGAAGCCATTTATGTCAGTCAACTCCTTGTGCCTTTAGTGCAGCTGCCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | TTGGAAGACTCAGGAGCCACACAAAGTTGGGTGTGTTaGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEDSGATQSWVC*HELRILALESL Trigger: CAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTGTGTGGCTCCTGAGTCTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR TCA 72 bp | CTGGATGCTCCAGAAGTGTTTAGAACTGGCCTGATCTaGCCTGCTCTTTCTGATAGATGGATGCAGACTATG | + |
|
Preference number: 3 (lower is better) Translates to: LDAPEVFRTGLI*PALSDRWMQTM Trigger: CATAGTCTGCATCCATCTATCAGAAAGAGCAGGTCAGATCAGGCCAGTTCTAAACACTTCTGGAGCATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | AACCTCATTCACACGTCTGCACTTACCACACTTGGGTaGAAGCAAATGGATCACAATGTCAAGGCTAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: NLIHTSALTTLG*KQMDHNVKASL Trigger: TAGGCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGACGTGTGAATGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | GACCATTTCTTGGAAGACTCAGGAGCCACACAAAGTTaGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: DHFLEDSGATQS*VCWHELRILAL Trigger: AAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTGTGTGGCTCCTGAGTCTTCCAAGAAATGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CCA 72 bp | CAGTGTCCTTGTAGAATCACAACTGTGGCTCAGATATaGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QCPCRITTVAQI*IVVLGVVPGFL Trigger: CAAAAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGTGATTCTACAAGGACACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAGGCCTGCCCTTCCCTTGCAGAAATGTTTTGGAGATGCCTTCTATGGTAAAGTACCTTATAGGCTaGTTACAAGGACAGTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PLGLPFPCRNVLEMPSMVKYLIG*LQGQLL Trigger: TAACAACTGTCCTTGTAACAAGCCTATAAGGTACTT...TACCATAGAAGGCATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCCTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTTGGAGCTTCTTAATGCACCACCACTGGAGTaGCAGATCCCATACCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: IVCLFKTCVCVVLLELLNAPPLE*QIPYLT Trigger: TGTCAGGTATGGGATCTGCAACTCCAGTGGTGGTGC...ATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR GCA 72 bp | TTTCTCTCAATAAAGCAAAAACCTCATTCACACGTCTaGACTTACCACACTTGGGTGGAAGCAAATGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: FLSIKQKPHSHV*TYHTWVEANGS Trigger: TGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGACGTGTGAATGAGGTTTTTGCTTTATTGAGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | CGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCGCCCTCGGCAGCGACTaGGAGAGGCTGGCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGHYRRPALSFQVPHCGAALGSD*ERLALA Trigger: TGCCAGGGCCAGCCTCTCCCAGTCGCTGCCGAGGGC...GGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCTCCCCAGCCACAGTCTaGGGTCAGGCTGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGMMGQCASWGFEHILPGSPATV*GQAASS Trigger: GCTGGAGGCAGCCTGACCTCAGACTGTGGCTGGGGA...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | GTATCCAAGGAAGAGGGGTTGGCCCACACATCCTGCCCAGAGAAGCCAGCATCCAAGGTAGCCGCAGTGTaGGCTGGGACAGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSKEEGLAHTSCPEKPASKVAAV*AGTAGC Trigger: GCACCCAGCTGTCCCAGCCCACACTGCGGCTACCTT...GGATGCTGGCTTCTCTGGGCAGGATGTGTGGGCCAACCCCTCTTCCTTGGATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | TTCACGAGTTTGTTGAGTGTGAAGCCAGCCTGGGCTCCACAGCAACACCCTGCCCCCGTACCAGTCTCCTaGCTTCTTGCCCGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTSLLSVKPAWAPQQHPAPVPVS*LLARAP Trigger: CGGAGCTCGGGCAAGAAGGCAGGAGACTGGTACGGG...GGCAGGGTGTTGCTGTGGAGCCCAGGCTGGCTTCACACTCAACAAACTCGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | CCCCAGGCTGAGACCTTAGTATCCAAGGAAGAGGGGTaGGCCCACACATCCTGCCCAGAGAAGCCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PQAETLVSKEEG*AHTSCPEKPAS Trigger: GGATGCTGGCTTCTCTGGGCAGGATGTGTGGGCCAACCCCTCTTCCTTGGATACTAAGGTCTCAGCCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | TGGATGCAGACTATGACCCCAGCCAACCACGGAAGAAGCTTCGTGAGGCCCCCAACACCACCAGGCGGCTaGCTTCTGAGCAACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMQTMTPANHGRSFVRPPTPPGG*LLSNSP Trigger: TGGAGAGTTGCTCAGAAGTCAGCCGCCTGGTGGTGT...TGGGGGCCTCACGAAGCTTCTTCCGTGGTTGGCTGGGGTCATAGTCTGCATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | GAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTGGTGGGCCTGATCCTAGCTaGGATGTCAGGGCGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMVASPAEVNSGDLAEAGGPDPS*DVRAAA Trigger: AGCCGCCGCCCTGACATCTCAGCTAGGATCAGGCCC...ACCAGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| CDS-3UTR GCA 90 bp | TTCACGAGTTTGTTGAGTGTGAAGCCAGCCTGGGCTCCACAGCAACACCCTGCCTCTTGCGGGGCGAGGTaGAGTGAAAGGACTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTSLLSVKPAWAPQQHPASCGAR*SERTPG Trigger: CCCTGGAGTCCTTTCACTGCACCTCGCCCCGCAAGA...GGCAGGGTGTTGCTGTGGAGCCCAGGCTGGCTTCACACTCAACAAACTCGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCACCGAAGGGGGCCCGTaGATGATCAGCGAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGMMGQCASWGFEHILPGTEGGP*MISEPG Trigger: TCCTGGTTCGCTGATCATCCACGGGCCCCCTTCGGT...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | AGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTAGGGGGAAGCTGGGCTaGCTGACATCCACTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLSTTCPVVSSTALWCPRGKLG*LTSTVG Trigger: GCCCACAGTGGATGTCAGCCAGCCCAGCTTCCCCCT...AGGGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACTGTGGGTGGGCTGGGACAGCTaGGTGCAGAGGGCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVAMETRGCSVLVESQLWVGWDS*VQRASR Trigger: CCTGGATGCCCTCTGCACCCAGCTGTCCCAGCCCAC...CCACAGTTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | TGGATGCAGACTATGACCCCAGCCAACCACGGAAGAAGCTTCGTGAGGCCCCCATCTCCACAGCTTTCCTaGGGATGTGTGCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WMQTMTPANHGRSFVRPPSPQLS*GCVPPQ Trigger: CTGTGGTGGCACACATCCTCAGGAAAGCTGTGGAGA...TGGGGGCCTCACGAAGCTTCTTCCGTGGTTGGCTGGGGTCATAGTCTGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | TGGATGCAGACTATGACCCCAGCCAACCACGGAAGAAGCTTCGTGAGGCCCCCACTGCTCCATCTCCAGTaGACCCTGTGTCCATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WMQTMTPANHGRSFVRPPLLHLQ*TLCPSW Trigger: CCAAGATGGACACAGGGTGCACTGGAGATGGAGCAG...TGGGGGCCTCACGAAGCTTCTTCCGTGGTTGGCTGGGGTCATAGTCTGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | CATGGCATGATGGGGCAGTGTGCCTCATGGGGCTTTGAACACATACTACCCGGCACCCCACGGTACAGCTaGGGTCCATCTTGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGMMGQCASWGFEHILPGTPRYS*GPSWQR Trigger: CCTTTGCCAAGATGGACCCCAGCTGTACCGTGGGGT...GCCGGGTAGTATGTGTTCAAAGCCCCATGAGGCACACTGCCCCATCATGCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | CCCCCACCTCAGGCAAGAGAAAGCGCAAGTCTCCATTaGCAGCTGCAGTGGGGCAGGAGAAGCCCATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPPQARESASLH*QLQWGRRSPCL Trigger: CAAACATGGGCTTCTCCTGCCCCACTGCAGCTGCAAATGGAGACTTGCGCTTTCTCTTGCCTGAGGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | AGTACTACCGTCTGGACTACGAGGACATTATCGACGACCTGCCCTGTCGTTTCAGGGAGAGGCTGGCCCTaGCATCTCAGAGGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STTVWTTRTLSTTCPVVSGRGWP*HLRGSQ Trigger: CTGGCTTCCTCTGAGATGCCAGGGCCAGCCTCTCCC...TGAAACGACAGGGCAGGTCGTCGATAATGTCCTCGTAGTCCAGACGGTAGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | CGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTGCCCAACCATACTTaGCGTTGTTCCAGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGHYRRPALSFQVPHCGALPNHT*RCSRLS Trigger: TGACAGCCTGGAACAACGTCAAGTATGGTTGGGCAG...GGCACCACAGTGCGGTACTTGAAACGACAGGGCAGGTCGTCGATAATGTCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAAAAGGGGGCCCGTGGATaGTCAGCGAACCAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GIMVAMETRGCSVLVESQKGARG*SANQET Trigger: TGTTTCCTGGTTCGCTGATCATCCACGGGCCCCCTT...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | TCTGCACTTACCACACTTGGGTGGAAGCAAATGGATCACAATGTCAAGGCTAGCCGGGGCGAGGTGCAGTaGAAGGACTCCAGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SALTTLGWKQMDHNVKASRGEVQ*KDSRGK Trigger: CTTCCCCCTGGAGTCCTTTCACTGCACCTCGCCCCG...GCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | ACAACTGTGGCTCAGATATGGATTGTAGTGTTAGGGGTGGTGCCAGGGTTTTTGTCCAGGCTGTGGTCCTaGGCGTGGCCTTCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TTVAQIWIVVLGVVPGFLSRLWS*AWPSAT Trigger: AGTGGCTGAAGGCCACGCTCAGGACCACAGCCTGGA...CAAAAACCCTGGCACCACCCCTAACACTACAATCCATATCTGAGCCACAGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGGCGACTGGGAGAGGCTaGCCCTGGCATCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSWVCWHELRILALESLRATGRG*PWHLRG Trigger: TCCTCTGAGATGCCAGGGCCAGCCTCTCCCAGTCGC...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | GAGGTCACAAGTTCAGCAGACAGAGATTGCAGGCCTTaGGTCTCAACCCCAAAAGGCTGCACTTCCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVTSSADRDCRP*VSTPKGCTSAS Trigger: ACTGGCGGAAGTGCAGCCTTTTGGGGTTGAGACCAAAGGCCTGCAATCTCTGTCTGCTGAACTTGTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | AGTACTACCGTCTGGACTACGAGGACATTATCGACGACCTGCCCTGTCGTTTCATACACTGTGCAGTCCTaGGAGACGTACACCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTVWTTRTLSTTCPVVSYTVQS*ETYTTR Trigger: CCTGGTGGTGTACGTCTCTCAGGACTGCACAGTGTA...TGAAACGACAGGGCAGGTCGTCGATAATGTCCTCGTAGTCCAGACGGTAGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | TCTCCCTGTAGGATGGAAATGTCCACAGAAGCCACAGGAAAGTCACAGAGCAAGGTACCGTTCCGTGACTaGGGAGGAGCTGAGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPCRMEMSTEATGKSQSKVPFRD*GGAEDP Trigger: AGGATCCTCAGCTCCTCCTCAGTCACGGAACGGTAC...CTTGCTCTGTGACTTTCCTGTGGCTTCTGTGGACATTTCCATCCTACAGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | TCTGCACTTACCACACTTGGGTGGAAGCAAATGGATCACAATGTCAAGGCTAGCAGTCTCCTGCCTTCTTaGCCGAGCTCCGCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SALTTLGWKQMDHNVKASSLLPS*PSSAQA Trigger: AGCTTGGGCGGAGCTCGGGCAAGAAGGCAGGAGACT...GCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGGCCTCCAGCAAGGGGTaGGAAGTCCCGGCGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: QSWVCWHELRILALESLRASSKG*EVPAIC Trigger: ACATATCGCCGGGACTTCCCACCCCTTGCTGGAGGC...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTGTAGGATGGAAATGTCCACAGAAGCCACAGGAAAGTCACAGAGCAAGATGAAGTACAGTGAATaGCGGGGCTTGCCGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPCRMEMSTEATGKSQSKMKYSE*RGLPPM Trigger: CATGGGCGGCAAGCCCCGGCATTCACTGTACTTCAT...CTTGCTCTGTGACTTTCCTGTGGCTTCTGTGGACATTTCCATCCTACAGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR TCA 90 bp | CTCGAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTCACATCTGTCATACTTaGCGTTGTTCCAGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEMVASPAEVNSGDLAEAHICHT*RCSRLS Trigger: TGACAGCCTGGAACAACGTCAAGTATGACAGATGTG...AGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGGCCTGCCCTTCCCTTGCAGAAATGTTTTGGAGATGCCTTCTATGGTACAGGCGTGCTACATCTaGCTTGTACACTGTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLGLPFPCRNVLEMPSMVQACYI*LVHCAV Trigger: GACTGCACAGTGTACAAGGCAGATGTAGCACGCCTG...TACCATAGAAGGCATCTCCAAAACATTTCTGCAAGGGAAGGGCAGGCCTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | CTTGGTGAGGGGTCATCATGGTTCAGACTTGAGAGATaGAGGGCATGCCTGCAGCACTCAGATAAAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGEGSSWFRLER*RACLQHSDKGS Trigger: TGACCCTTTATCTGAGTGCTGCAGGCATGCCCTCAATCTCTCAAGTCTGAACCATGATGACCCCTCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | CAGCAGATGTGTAAGCTAGAGGCCAGTCAGTCCCTCTaGGTGAGGGGTCATCATGGTTCAGACTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQMCKLEASQSL*VRGHHGSDLRD Trigger: ATCTCTCAAGTCTGAACCATGATGACCCCTCACCAAGAGGGACTGACTGGCCTCTAGCTTACACATCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | TGCTGTGGAAGGTCTCAGCACACAGGAGACCATTTCTaGGAAGACTCAGGAGCCACACAAAGTTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCGRSQHTGDHF*EDSGATQSWVC Trigger: ACACACCCAACTTTGTGTGGCTCCTGAGTCTTCCAAGAAATGGTCTCCTGTGTGCTGAGACCTTCCACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGGGTCCGGCTTTTAACTaGCCAACCATACTTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSWVCWHELRILALESLRGPAFN*PTILDV Trigger: AACGTCAAGTATGGTTGGGCAGTTAAAAGCCGGACC...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | GCAAAAACCTCATTCACACGTCTGCACTTACCACACTaGGGTGGAAGCAAATGGATCACAATGTCAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AKTSFTRLHLPH*GGSKWITMSRL Trigger: TAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGACGTGTGAATGAGGTTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTTGGAGCTTCTTAATTCTCTAGGCAGAAAATaGAGGAGCAGGCCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVCLFKTCVCVVLLELLNSLGRK*RSRPWA Trigger: GGCCCAGGGCCTGCTCCTGCATTTTCTGCCTAGAGA...ATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTTGGAGCTTCTTAATTGGCAAAGGCCATCTTaGGGGGCGAGGTGCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVCLFKTCVCVVLLELLNWQRPS*GARCSE Trigger: TTCACTGCACCTCGCCCCGCAAGATGGCCTTTGCCA...ATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CCA 90 bp | ATTGTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTTGGAGCTTCTTAATAGCTGGGGTCCATCTTaGCAAAGGCCATCTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVCLFKTCVCVVLLELLNSWGPS*QRPSCG Trigger: CCCGCAAGATGGCCTTTGCCAAGATGGACCCCAGCT...ATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | GTGTGTTTATTTAAGACTTGTGTCTGTGTAGTCCTCTaGGAGCTTCTTAATGTAGGTCAGGGTGGTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCLFKTCVCVVL*ELLNVGQGGLK Trigger: TTTGAGACCACCCTGACCTACATTAAGAAGCTCCAAGAGGACTACACAGACACAAGTCTTAAATAAACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| 3UTR CAA 72 bp | CTGAACAAAATAAATTCTTACAAGTACCTTATAGGCTaGTTACAAGGACAGTTGTTACCATCATCCCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNKINSYKYLIG*LQGQLLPSSPR Trigger: TCTAGGGGATGATGGTAACAACTGTCCTTGTAACAAGCCTATAAGGTACTTGTAAGAATTTATTTTGTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 90 bp | TGGGGGCCCACGACGACCAGGCCCTCGGCAGCGACTGGGAGAGGCTaGCCCTGGCATCTCAGAGGAAGCCAGGCCTGTGCCTTCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGPTTTRPSAATGRG*PWHLRGSQACAFHP Trigger: TGGGTGGAAGGCACAGGCCTGGCTTCCTCTGAGATGCCAGGGCCAGCCTCTCCCAGTCGCTGCCGAGGGCCTGGTCGTCGTGGGCCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 90 bp | GTGTCCATCTTGGGGGCCCACGACGACCAGGCCCTCGGCAGCGACTaGGAGAGGCTGGCCCTGGCATCTCAGAGGAAGCCAGGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSILGAHDDQALGSD*ERLALASQRKPGLC Trigger: GCACAGGCCTGGCTTCCTCTGAGATGCCAGGGCCAGCCTCTCCCAGTCGCTGCCGAGGGCCTGGTCGTCGTGGGCCCCCAAGATGGACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 90 bp | GTGCCAACGGTCCTGCTCCATCTCCAGTGCACCCTGTGTCCATCTTaGGGGCCCACGACGACCAGGCCCTCGGCAGCGACTGGGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPTVLLHLQCTLCPS*GPTTTRPSAATGRG Trigger: GCCTCTCCCAGTCGCTGCCGAGGGCCTGGTCGTCGTGGGCCCCCAAGATGGACACAGGGTGCACTGGAGATGGAGCAGGACCGTTGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS TCA 90 bp | TTTGAACTTGTCCACCTCGTCGGGCTCGGCGGGGTCTGTCCCAGATaGACCGAGAGCTGCCACTCCGGACCCCGAAGGTCCCAGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FELVHLVGLGGVCPR*TESCHSGPRRSQVA Trigger: AGCAACCTGGGACCTTCGGGGTCCGGAGTGGCAGCTCTCGGTTCATCTGGGACAGACCCCGCCGAGCCCGACGAGGTGGACAAGTTCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065005.5 ENSMUST00000217269.2 |
||
| CDS TCA 90 bp | CGCCCAAGCTCCACTAGCCGATGTAGACCGAAGGGGGCCCGTGGATaGTCAGCGAACCAGGAAACAATCCGCCGGTGCCAACGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPSSTSRCRPKGARG*SANQETIRRCQRSC Trigger: GCAGGACCGTTGGCACCGGCGGATTGTTTCCTGGTTCGCTGATCATCCACGGGCCCCCTTCGGTCTACATCGGCTAGTGGAGCTTGGGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS GCA 90 bp | GGATGTGTGCCACCACAGAGGGCCCGTACCAGTCTCCTGCCTTCTTaGCCGAGCTCCGCCCAAGCTCCACTAGCCGATGTAGACCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCVPPQRARTSLLPS*PSSAQAPLADVDRR Trigger: CCTTCGGTCTACATCGGCTAGTGGAGCTTGGGCGGAGCTCGGGCAAGAAGGCAGGAGACTGGTACGGGCCCTCTGTGGTGGCACACATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS TCA 90 bp | AGCGTGGCCTTCAGCCACTGTGAACATGGGGTACCGTTCCGTGACTaGGGAGGAGCTGAGGATCCTCATCAGCTCCGAGCAGAGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVAFSHCEHGVPFRD*GGAEDPHQLRAECL Trigger: GAGACACTCTGCTCGGAGCTGATGAGGATCCTCAGCTCCTCCTCAGTCACGGAACGGTACCCCATGTTCACAGTGGCTGAAGGCCACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 90 bp | TCTCAAACTCCTTCCTGTTCCCAGCATAGAACCCCACGGTACAGCTaGGGTCCATCTTGGCAAAGGCCATCTTGCGGGGCGAGGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQTPSCSQHRTPRYS*GPSWQRPSCGARCS Trigger: ACTGCACCTCGCCCCGCAAGATGGCCTTTGCCAAGATGGACCCCAGCTGTACCGTGGGGTTCTATGCTGGGAACAGGAAGGAGTTTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGGATGGGGTTCACGAGTTTGTTGAGTGTGAAGCCAGCCTGGGCTCCAACTGCCCAACCATACTaGACGTTGTTCCAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGRMGFTSLLSVKPAWAPTAQPY*TLFQAV Trigger: GACAGCCTGGAACAACGTCAAGTATGGTTGGGCAGT...TGGAGCCCAGGCTGGCTTCACACTCAACAAACTCGTGAACCCCATCCTGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACAGCTGGGGTCCATCTaGGCAAAGGCCATCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GIMVAMETRGCSVLVESQQLGSI*AKAILR Trigger: CCGCAAGATGGCCTTTGCCAAGATGGACCCCAGCTG...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS TCA 90 bp | AGGTCAGGCTGCCTCCAGCAAGGGGTGGGAAGTCCCGGCGATATGTaGGCCATAGTCGAGATACAAAGTCCCTTTGAAACCGCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RSGCLQQGVGSPGDM*AIVEIQSPFETAGC Trigger: ACATCCAGCGGTTTCAAAGGGACTTTGTATCTCGACTATGGCTCACATATCGCCGGGACTTCCCACCCCTTGCTGGAGGCAGCCTGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS GCA 90 bp | CACAGATTTCCACTCCGCTGTAGGATCTGGCCAGGACAGCAGGCGTaGTACATCTGCCTTGTACACTGTGCAGTCCTGAGAGACGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: HRFPLRCRIWPGQQA*YICLVHCAVLRDVH Trigger: GTGTACGTCTCTCAGGACTGCACAGTGTACAAGGCAGATGTAGCACGCCTGCTGTCCTGGCCAGATCCTACAGCGGAGTGGAAATCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 90 bp | TACAGGCACCAGGATGACCACAGATTTCCACTCCGCTGTAGGATCTaGCCAGGACAGCAGGCGTGCTACATCTGCCTTGTACACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRHQDDHRFPLRCRI*PGQQACYICLVHCA Trigger: TGCACAGTGTACAAGGCAGATGTAGCACGCCTGCTGTCCTGGCCAGATCCTACAGCGGAGTGGAAATCTGTGGTCATCCTGGTGCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | GGTCTCAACCCCAAAAGGCTGCACTTCCGCCAGTTAGGCCGCCAACGGAAGAAACAGGCTGTCAGGAACTaGGCTTTGAACTTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLNPKRLHFRQLGRQRKKQAVRN*ALNLST Trigger: GGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTG...TTTCTTCCGTTGGCGGCCTAACTGGCGGAAGTGCAGCCTTTTGGGGTTGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTGGGTGTGTTGGCATGAGCTTAGAATCCTAGCACTTGAGAGTCTGAGGCAGTCTCCTGCCTTCTaGCCCGAGCTCCGCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSWVCWHELRILALESLRQSPAF*PELRPS Trigger: GCTTGGGCGGAGCTCGGGCAAGAAGGCAGGAGACTG...CCTCAGACTCTCAAGTGCTAGGATTCTAAGCTCATGCCAACACACCCAACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | GAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTGGTGTCAGGAACTTGGCTTaGAACTTGTCCACCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EMVASPAEVNSGDLAEAGVRNLA*NLSTSS Trigger: CGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGAC...ACCAGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| CDS-3UTR CAA 90 bp | CTCGAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTCAGGCTGTCAGGAACTaGGCTTTGAACTTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LEMVASPAEVNSGDLAEAQAVRN*ALNLST Trigger: GGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTG...AGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAACAACCATACTTGACGTaGTTCCAGGCTGTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GIMVAMETRGCSVLVESQQPYLT*FQAVRN Trigger: GTTCCTGACAGCCTGGAACAACGTCAAGTATGGTTG...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | CTCGAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTCTGTCATACTTGACGTaGTTCCAGGCTGTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEMVASPAEVNSGDLAEALSYLT*FQAVRN Trigger: GTTCCTGACAGCCTGGAACAACGTCAAGTATGACAG...AGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| CDS-3UTR CAA 90 bp | CTCGAAATGGTAGCATCGCCCGCAGAGGTGAACAGTGGAGATCTTGCTGAAGCTCCACATCTGTCATACTaGACGTTGTTCCAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEMVASPAEVNSGDLAEAPHLSY*TLFQAV Trigger: GACAGCCTGGAACAACGTCAAGTATGACAGATGTGG...AGCTTCAGCAAGATCTCCACTGTTCACCTCTGCGGGCGATGCTACCATTTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCATGGTAGCCATGGAGACCCGTGGCTGCAGTGTCCTTGTAGAATCACAAAGATACAAAGTCCCTTaGAAACCGCTGGATGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GIMVAMETRGCSVLVESQRYKVP*KPLDVT Trigger: GGTGACATCCAGCGGTTTCAAAGGGACTTTGTATCT...TTGTGATTCTACAAGGACACTGCAGCCACGGGTCTCCATGGCTACCATGATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | GGGTACATAGAGTTTAAGGCCAGTCATGAACCCCCTTCTCAAACAAAAAGGGCATCGGAGCTGGGCCTTTaGGCCTTGAGTAGTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GYIEFKASHEPPSQTKRASELGL*ALSSRP Trigger: AGGACGACTACTCAAGGCCAAAAGGCCCAGCTCCGA...TGCCCTTTTTGTTTGAGAAGGGGGTTCATGACTGGCCTTAAACTCTATGTACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTTACCACACTTGGGTGGAAGCAAATGGATCACAATGTCAAGGCTAGCGTCAGGAACTTGGCTTaGAACTTGTCCACCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SALTTLGWKQMDHNVKASVRNLA*NLSTSS Trigger: CGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGAC...GCTAGCCTTGACATTGTGATCCATTTGCTTCCACCCAAGTGTGGTAAGTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 72 bp | TTGGGGGCCCACGACGACCAGGCCCTCGGCAGCGACTaGGAGAGGCTGGCCCTGGCATCTCAGAGGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGAHDDQALGSD*ERLALASQRKP Trigger: TGGCTTCCTCTGAGATGCCAGGGCCAGCCTCTCCCAGTCGCTGCCGAGGGCCTGGTCGTCGTGGGCCCCCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS GCA 72 bp | AATCCGCCGGTGCCAACGGTCCTGCTCCATCTCCAGTaGACCCTGTGTCCATCTTGGGGGCCCACGACGACC | + |
|
Preference number: 6 (lower is better) Translates to: NPPVPTVLLHLQ*TLCPSWGPTTT Trigger: GGTCGTCGTGGGCCCCCAAGATGGACACAGGGTGCACTGGAGATGGAGCAGGACCGTTGGCACCGGCGGATT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CAA 72 bp | GCCACCACAGAGGGCCCGTACCAGTCTCCTGCCTTCTaGCCCGAGCTCCGCCCAAGCTCCACTAGCCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: ATTEGPYQSPAF*PELRPSSTSRC Trigger: ACATCGGCTAGTGGAGCTTGGGCGGAGCTCGGGCAAGAAGGCAGGAGACTGGTACGGGCCCTCTGTGGTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS GCA 72 bp | CCACCACAGAGGGCCCGTACCAGTCTCCTGCCTTCTTaGCCGAGCTCCGCCCAAGCTCCACTAGCCGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPQRARTSLLPS*PSSAQAPLADV Trigger: TACATCGGCTAGTGGAGCTTGGGCGGAGCTCGGGCAAGAAGGCAGGAGACTGGTACGGGCCCTCTGTGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CCA 72 bp | AGTAGTCGTCCTGTGCAAGGTAGCCGCAGTGTGGGCTaGGACAGCTGGGTGCAGAGGGCATCCAGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRPVQGSRSVG*DSWVQRASRLW Trigger: CCACAGCCTGGATGCCCTCTGCACCCAGCTGTCCCAGCCCACACTGCGGCTACCTTGCACAGGACGACTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
||
| CDS CAA 90 bp | AGGATGTGTGCCACCACAGAGGGCCCGTACCAGTCTCCTGCCTTCTaGCCCGAGCTCCGCCCAAGCTCCACTAGCCGATGTAGACCGAAG | + |
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Preference number: 6 (lower is better) Translates to: RMCATTEGPYQSPAF*PELRPSSTSRCRPK Trigger: CTTCGGTCTACATCGGCTAGTGGAGCTTGGGCGGAGCTCGGGCAAGAAGGCAGGAGACTGGTACGGGCCCTCTGTGGTGGCACACATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS GCA 72 bp | GCGAACCAGGAAACAATCCGCCGGTGCCAACGGTCCTaGTCCATCTCCAGTGCACCCTGTGTCCATCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ANQETIRRCQRS*SISSAPCVHLG Trigger: CCCAAGATGGACACAGGGTGCACTGGAGATGGAGCAGGACCGTTGGCACCGGCGGATTGTTTCCTGGTTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CCA 72 bp | CCTTCCTGTTCCCAGCATAGAACCCCACGGTACAGCTaGGGTCCATCTTGGCAAAGGCCATCTTGCGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PSCSQHRTPRYS*GPSWQRPSCGA Trigger: CGCCCCGCAAGATGGCCTTTGCCAAGATGGACCCCAGCTGTACCGTGGGGTTCTATGCTGGGAACAGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS TCA 72 bp | TCCACTAGCCGATGTAGACCGAAGGGGGCCCGTGGATaGTCAGCGAACCAGGAAACAATCCGCCGGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: STSRCRPKGARG*SANQETIRRCQ Trigger: TTGGCACCGGCGGATTGTTTCCTGGTTCGCTGATCATCCACGGGCCCCCTTCGGTCTACATCGGCTAGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS GCA 72 bp | GTAACATACATCCCCAGCCACAGTCTGAGGTCAGGCTaGCTCCAGCAAGGGGTGGGAAGTCCCGGCGATATG | + |
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Preference number: 6 (lower is better) Translates to: VTYIPSHSLRSG*LQQGVGSPGDM Trigger: CATATCGCCGGGACTTCCCACCCCTTGCTGGAGGCAGCCTGACCTCAGACTGTGGCTGGGGATGTATGTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 72 bp | ACGTTGTTCCAGGCTGTCAGGAACTTGGCTTTGAACTaGTCCACCTCGTCGGGCTCGGCGGGGTCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLFQAVRNLALN*STSSGSAGSVP Trigger: TGGGACAGACCCCGCCGAGCCCGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065005.5 ENSMUST00000217269.2 |
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| CDS CAA 90 bp | CCATACTTGACGTTGTTCCAGGCTGTCAGGAACTTGGCTTTGAACTaGTCCACCTCGTCGGGCTCGGCGGGGTCTGTCCCAGATGAACCG | + |
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Preference number: 6 (lower is better) Translates to: PYLTLFQAVRNLALN*STSSGSAGSVPDEP Trigger: CGGTTCATCTGGGACAGACCCCGCCGAGCCCGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS GCA 72 bp | CCACTCCGCTGTAGGATCTGGCCAGGACAGCAGGCGTaGTACATCTGCCTTGTACACTGTGCAGTCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PLRCRIWPGQQA*YICLVHCAVLR Trigger: TCTCAGGACTGCACAGTGTACAAGGCAGATGTAGCACGCCTGCTGTCCTGGCCAGATCCTACAGCGGAGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 90 bp | TCATACTTGACGTTGTTCCAGGCTGTCAGGAACTTGGCTTTGAACTaGTCCACCTCGTCGGGCTCGGCGGGGTCTGTCCCAGATGAACCG | + |
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Preference number: 6 (lower is better) Translates to: SYLTLFQAVRNLALN*STSSGSAGSVPDEP Trigger: CGGTTCATCTGGGACAGACCCCGCCGAGCCCGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
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| CDS TCA 72 bp | TTCAGCCACTGTGAACATGGGGTACCGTTCCGTGACTaGGGAGGAGCTGAGGATCCTCATCAGCTCCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSHCEHGVPFRD*GGAEDPHQLRA Trigger: TGCTCGGAGCTGATGAGGATCCTCAGCTCCTCCTCAGTCACGGAACGGTACCCCATGTTCACAGTGGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 90 bp | TTAACTGCCCAACCATACTTGACGTTGTTCCAGGCTGTCAGGAACTaGGCTTTGAACTTGTCCACCTCGTCGGGCTCGGCGGGGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LTAQPYLTLFQAVRN*ALNLSTSSGSAGSV Trigger: GACAGACCCCGCCGAGCCCGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGGTTGGGCAGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS TCA 72 bp | AAAACACAAAGTCCTCGGAGCTGGGCCTTTTGGCCTTaGGTAGTCGTCCTGTGCAAGGTAGCCGCAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: KTQSPRSWAFWP*VVVLCKVAAVW Trigger: CCACACTGCGGCTACCTTGCACAGGACGACTACTCAAGGCCAAAAGGCCCAGCTCCGAGGACTTTGTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS GCA 72 bp | TGTAGGATCTGGCCAGGACAGCAGGCGTGCTACATCTaGCTTGTACACTGTGCAGTCCTGAGAGACGTACAC | + |
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Preference number: 6 (lower is better) Translates to: CRIWPGQQACYI*LVHCAVLRDVH Trigger: GTGTACGTCTCTCAGGACTGCACAGTGTACAAGGCAGATGTAGCACGCCTGCTGTCCTGGCCAGATCCTACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CCA 72 bp | CAGGATGACCACAGATTTCCACTCCGCTGTAGGATCTaGCCAGGACAGCAGGCGTGCTACATCTGCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: QDDHRFPLRCRI*PGQQACYICLV Trigger: TACAAGGCAGATGTAGCACGCCTGCTGTCCTGGCCAGATCCTACAGCGGAGTGGAAATCTGTGGTCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 72 bp | CAACCATACTTGACGTTGTTCCAGGCTGTCAGGAACTaGGCTTTGAACTTGTCCACCTCGTCGGGCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: QPYLTLFQAVRN*ALNLSTSSGSA Trigger: CGCCGAGCCCGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 72 bp | CTGTCATACTTGACGTTGTTCCAGGCTGTCAGGAACTaGGCTTTGAACTTGTCCACCTCGTCGGGCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LSYLTLFQAVRN*ALNLSTSSGSA Trigger: CGCCGAGCCCGACGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
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| CDS TCA 72 bp | TGCCTCCAGCAAGGGGTGGGAAGTCCCGGCGATATGTaGGCCATAGTCGAGATACAAAGTCCCTTTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: CLQQGVGSPGDM*AIVEIQSPFET Trigger: GGTTTCAAAGGGACTTTGTATCTCGACTATGGCTCACATATCGCCGGGACTTCCCACCCCTTGCTGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS TCA 72 bp | GAGCAGAAAGTCATCCTGATAGCCAATGAAGTACAGTaGATGCCGGGGCTTGCCGCCCATGATGCCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: EQKVILIANEVQ*MPGLAAHDAQT Trigger: TGTCTGGGCATCATGGGCGGCAAGCCCCGGCATTCACTGTACTTCATTGGCTATCAGGATGACTTTCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 72 bp | AAAAACACAAAGTCCTCGGAGCTGGGCCTTTTGGCCTaGAGTAGTCGTCCTGTGCAAGGTAGCCGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: KNTKSSELGLLA*SSRPVQGSRSV Trigger: CACACTGCGGCTACCTTGCACAGGACGACTACTCAAGGCCAAAAGGCCCAGCTCCGAGGACTTTGTGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 90 bp | GGGCGGCGGCTCTGCAAAATCCATGCCACACCACATCTGTCATACTaGACGTTGTTCCAGGCTGTCAGGAACTTGGCTTTGAACTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GRRLCKIHATPHLSY*TLFQAVRNLALNLS Trigger: GGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGACAGATGTGGTGTGGCATGGATTTTGCAGAGCCGCCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
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| CDS CAA 90 bp | CGGCTCTGCAAAATCCATGCCACACCACATCTGTCATACTTGACGTaGTTCCAGGCTGTCAGGAACTTGGCTTTGAACTTGTCCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: RLCKIHATPHLSYLT*FQAVRNLALNLSTS Trigger: CGAGGTGGACAAGTTCAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGACAGATGTGGTGTGGCATGGATTTTGCAGAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
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| CDS TCA 72 bp | CGATATGTGAGCCATAGTCGAGATACAAAGTCCCTTTaGAACCGCTGGATGTCACCCTCTCCCTCGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: RYVSHSRDTKSL*NRWMSPSPSKW Trigger: CCATTTCGAGGGAGAGGGTGACATCCAGCGGTTTCAAAGGGACTTTGTATCTCGACTATGGCTCACATATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065005.5 |
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| CDS CAA 72 bp | CTCTGCAAAATCCATGCCACACCACATCTGTCATACTaGACGTTGTTCCAGGCTGTCAGGAACTTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LCKIHATPHLSY*TLFQAVRNLAL Trigger: CAAAGCCAAGTTCCTGACAGCCTGGAACAACGTCAAGTATGACAGATGTGGTGTGGCATGGATTTTGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217269.2 |
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