Pregenerated sensors for ATG4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026280Ensembl transcript IDs: ENSMUST00000027502.16, ENSMUST00000149436.8, ENSMUST00000185482.7, ENSMUST00000186811.2, ENSMUST00000187824.7
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGAGCAGGCCCTCGGGACAGAGGTGGCACAGGTGAACAGCACTTaGCAGGGATGGGCTGGGTGGATGGAATGCGGTGACACTGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: AEQALGTEVAQVNST*QGWAGWMECGDTEC Trigger: GCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTGCCAAGTGCTGTTCACCTGTGCCACCTCTGTCCCGAGGGCCTGCTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CCA 90 bp | CCTGGCAGGCCAGATGGGAAGGCTGCTGTTCCACCAGCTCAAACATaGGCAGGGCACCTCCAAGCTGGGATAGCTCATTGCCTGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: PGRPDGKAAVPPAQT*AGHLQAGIAHCLGP Trigger: GGGACCCAGGCAATGAGCTATCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| 3UTR GCA 90 bp | TACCCTACCACCAGTGGGCACGGTGTCTCAAGCATAGAGCAGCTCTaGTCCCTTCCCTTTCCTCCCAGAGGGAAGCTGGGTGGCACGCTA | + |
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Preference number: 1 (lower is better) Translates to: YPTTSGHGVSSIEQL*SLPFPPRGKLGGTL Trigger: TAGCGTGCCACCCAGCTTCCCTCTGGGAGGAAAGGGAAGGGAGCAGAGCTGCTCTATGCTTGAGACACCGTGCCCACTGGTGGTAGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR GCA 90 bp | GTGGAAGCTCTCGTCGGGGATGAAGCAGCTGTCAGTCAGCTCCACTaGAGGCTGTGTAGTGTGGGGGTCCAGATAGATGAGCTCCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: VEALVGDEAAVSQLH*RLCSVGVQIDELLP Trigger: GGGGAGGAGCTCATCTATCTGGACCCCCACACTACACAGCCTGCAGTGGAGCTGACTGACAGCTGCTTCATCCCCGACGAGAGCTTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR GCA 90 bp | GCAATGGACGGGTCAAGCTCTCCAATGCCCATCCTAGAGGGAGGGTaGTGGCAGTGGAAGCTCTCGTCGGGGATGAAGCAGCTGTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: AMDGSSSPMPILEGG*WQWKLSSGMKQLSV Trigger: GACTGACAGCTGCTTCATCCCCGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCATTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR GCA 90 bp | TCTAGGGACAGGTTCAGGACATCCTGGCAGGCCAGATGGGAAGGCTaGTGTTCCACCAGCTCAAACATGGGCAGGGCACCTCCAAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SRDRFRTSWQARWEG*CSTSSNMGRAPPSW Trigger: CCAGCTTGGAGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| 3UTR CCA 90 bp | ACAGAGGTGGCACAGGTGAACAGCACTTGGCAGGGATGGGCTGGGTaGATGGAATGCGGTGACACTGAGTGCCCAAGGCAGGTCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: TEVAQVNSTWQGWAG*MECGDTECPRQVWV Trigger: AACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTGCCAAGTGCTGTTCACCTGTGCCACCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CCA 90 bp | GGCAGTCTGACTCCAAGCATTAAGGCCTCCAGGCACCATAGTCCTTaGTCCATGAGCAGAGCAGGCCCTCGGGACAGAGGTGGCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: GSLTPSIKASRHHSP*SMSRAGPRDRGGTG Trigger: ACCTGTGCCACCTCTGTCCCGAGGGCCTGCTCTGCTCATGGACCAAGGACTATGGTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CCA 90 bp | GGGTCAAGCTCTCCAATGCCCATCCTAGAGGGAGGGTGCTGGCAGTaGAAGCTCTCGTCGGGGATGAAGCAGCTGTCAGTCAGCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: GSSSPMPILEGGCWQ*KLSSGMKQLSVSST Trigger: AGTGGAGCTGACTGACAGCTGCTTCATCCCCGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR CCA 90 bp | ATGGACGGGTCAAGCTCTCCAATGCCCATCCTAGAGGGAGGGTGCTaGCAGTGGAAGCTCTCGTCGGGGATGAAGCAGCTGTCAGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: MDGSSSPMPILEGGC*QWKLSSGMKQLSVS Trigger: GCTGACTGACAGCTGCTTCATCCCCGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR CCA 90 bp | AGAGCAGCTCTGCTCCCTTCCCTTTCCTCCCAGAGGGAAGCTGGGTaGCACGCTAAAAGCAGCAGGCGGTGTGTCATGAAACGCATCAAC | + |
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Preference number: 1 (lower is better) Translates to: RAALLPSLSSQREAG*HAKSSRRCVMKRIN Trigger: GTTGATGCGTTTCATGACACACCGCCTGCTGCTTTTAGCGTGCCACCCAGCTTCCCTCTGGGAGGAAAGGGAAGGGAGCAGAGCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CCA 90 bp | TCAGAAGAGTCTAGGGACAGGTTCAGGACATCCTGGCAGGCCAGATaGGAAGGCTGCTGTTCCACCAGCTCAAACATGGGCAGGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: SEESRDRFRTSWQAR*EGCCSTSSNMGRAP Trigger: AGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGACTCTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| 3UTR GCA 90 bp | GATGGCCTGTTGGTGACTTCAGCTCCAGCAGGGAACCCATTACAGTaGCTCTCTGAATCAGTAGGAAGTGCAGCCGCCCCAACACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: DGLLVTSAPAGNPLQ*LSESVGSAAAPTQG Trigger: TCCCTGTGTTGGGGCGGCTGCACTTCCTACTGATTCAGAGAGGCACTGTAATGGGTTCCCTGCTGGAGCTGAAGTCACCAACAGGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR CCA 90 bp | CTAGGCCTTCTGATGAGCGACTTCATGTGGACAGGCCCTTTGTGTTaGGGTTTAGGCAGTCTGACTCCAAGCATTAAGGCCTCCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LGLLMSDFMWTGPLC*GLGSLTPSIKASRH Trigger: GTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGCCTAAACCCCAACACAAAGGGCCTGTCCACATGAAGTCGCTCATCAGAAGGCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CCA 90 bp | ACCAAAGCTGATGTGCTGACCAGGGCTGGCAGTGTCAGAATCCAGTaGAGAATTCTGGAAGCTCCTGACCCACTGCTCTTCCTGACTAGG | + |
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Preference number: 1 (lower is better) Translates to: TKADVLTRAGSVRIQ*RILEAPDPLLFLTR Trigger: CCTAGTCAGGAAGAGCAGTGGGTCAGGAGCTTCCAGAATTCTCCACTGGATTCTGACACTGCCAGCCCTGGTCAGCACATCAGCTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR TCA 90 bp | AGCTTGAAGGCCCAGAAAGCCAGGGTTAGGTGGCAGGTATGGAAATaGGTGCCAAGGAGGTCTGAACTCTTCACTTGTGAGTGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SLKAQKARVRWQVWK*VPRRSELFTCECLE Trigger: CTCCAGGCACTCACAAGTGAAGAGTTCAGACCTCCTTGGCACTCATTTCCATACCTGCCACCTAACCCTGGCTTTCTGGGCCTTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CCA 90 bp | ACAATTTCCTGTGACCCAGATGGGTTTCTGAGAAGAGAAAGAACATaGAGGAAGGCTCAAGTAGCAGTGTGTACCCTACCACCAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TISCDPDGFLRRERT*RKAQVAVCTLPPVG Trigger: GCCCACTGGTGGTAGGGTACACACTGCTACTTGAGCCTTCCTCCATGTTCTTTCTCTTCTCAGAAACCCATCTGGGTCACAGGAAATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR GCA 90 bp | TACTTTCTCTCCAAAGCAAGTAGCAGCCTTGGGATTCTCTCCATATaGTTTCCCACTGAGGTAGCCCTTGATAAATCACACTGGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: YFLSKASSSLGILSI*FPTEVALDKSHWAE Trigger: CTCTGCCCAGTGTGATTTATCAAGGGCTACCTCAGTGGGAAAGCATATGGAGAGAATCCCAAGGCTGCTACTTGCTTTGGAGAGAAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR GCA 90 bp | ATCTTCTGGAGCTGGGGTTGTAAGCATTACAACTGCAGCCCAGTGTaGAAACAGAACTCTAGTCCCCTAGAACTCTTAACCACTGAACCA | + |
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Preference number: 1 (lower is better) Translates to: IFWSWGCKHYNCSPV*KQNSSPLELLTTEP Trigger: TGGTTCAGTGGTTAAGAGTTCTAGGGGACTAGAGTTCTGTTTGCACACTGGGCTGCAGTTGTAATGCTTACAACCCCAGCTCCAGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | CAGGGATGGGCTGGGTGGATGGAATGCGGTGACACTGAGTGCCCAAGGCAGGTCTGCGGTGACACTGAGTaGCCAAGGCAGGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: QGWAGWMECGDTECPRQVCGDTE*PRQVWV Trigger: AACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCA...GACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAAGGGCACCTCCAAGCTaGGATAGCTCATTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSAQGRSGFSKHPNEGHGRAPPS*DSSLPG Trigger: CCCAGGCAATGAGCTATCCCAGCTTGGAGGTGCCCT...TCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| 3UTR CAA 90 bp | GGGAATCCCAGGACCACAACTCCAGAAGCCCTAGGAGCTTGTCAGTaGCTCCAGGGTTCAGGGGTCCATCCTGTGCCCATGCACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: GNPRTTTPEALGACQ*LQGSGVHPVPMHTD Trigger: ATCAGTGTGCATGGGCACAGGATGGACCCCTGAACCCTGGAGCAACTGACAAGCTCCTAGGGCTTCTGGAGTTGTGGTCCTGGGATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CAA 90 bp | CCTAATGGGGAATCCCAGGACCACAACTCCAGAAGCCCTAGGAGCTaGTCAGTTGCTCCAGGGTTCAGGGGTCCATCCTGTGCCCATGCA | + |
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Preference number: 2 (lower is better) Translates to: PNGESQDHNSRSPRS*SVAPGFRGPSCAHA Trigger: TGCATGGGCACAGGATGGACCCCTGAACCCTGGAGCAACTGACAAGCTCCTAGGGCTTCTGGAGTTGTGGTCCTGGGATTCCCCATTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | GGATGGAATGCGGTGACACTGAGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACGCTGGGTGGATGGAATaGGGTGACACTGAGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GWNAVTLSAQGRSGFSKHAGWME*GDTECP Trigger: TGGGCACTCAGTGTCACCGCATTCCATCCACCCAGC...GTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCTGTGTAGCCCTGGCCGTCCTGGAACTCACTCTAAACCAGGCCGGCCTGTACCCTACCACCAGTaGGCACGGTGTCTCAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SSLCSPGRPGTHSKPGRPVPYHQ*ARCLKH Trigger: ATGCTTGAGACACCGTGCCCACTGGTGGTAGGGTAC...AGGCCGGCCTGGTTTAGAGTGAGTTCCAGGACGGCCAGGGCTACACAGAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR CCA 90 bp | GGATGGAATGCGGTGACACTGAGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACGATGGGCTGGGTGGATaGAATGCGGTGACACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GWNAVTLSAQGRSGFSKHDGLGG*NAVTLS Trigger: ACTCAGTGTCACCGCATTCCATCCACCCAGCCCATC...GTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCTGTGTAGCCCTGGCCGTCCTGGAACTCACTCTAAACCAGGCCGGCCTCGTCTAAGACTGACCTaGGAAGTGCCCCAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: SSLCSPGRPGTHSKPGRPRLRLT*EVPQKF Trigger: GAATTTCTGGGGCACTTCCCAGGTCAGTCTTAGACG...AGGCCGGCCTGGTTTAGAGTGAGTTCCAGGACGGCCAGGGCTACACAGAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGGTTGTAAGCATTACAACTGCAGCCCAGTGTGCAAACAGAACTCTAGTCCCCGCCCAGCAGTATaGGGCCATGATGTGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SWGCKHYNCSPVCKQNSSPRPAV*GHDVAV Trigger: GACAGCCACATCATGGCCTCATACTGCTGGGCGGGG...ACTAGAGTTCTGTTTGCACACTGGGCTGCAGTTGTAATGCTTACAACCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTGGTTTTCTCGAGACAGGGTTTCTTCTCTGTGTAGCCCTGGCCGTCCTGAGCATAGAGCAGCTCTaGTCCCTTCCCTTTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AFGFLETGFLLCVALAVLSIEQL*SLPFPP Trigger: GGGAGGAAAGGGAAGGGAGCAGAGCTGCTCTATGCT...CAGGACGGCCAGGGCTACACAGAGAAGAAACCCTGTCTCGAGAAAACCAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCTCTTGCTACCTTGTGGGCTACTTAGAGCTGCTGCATCTGGAGTAGCTCAGAGGGAAGCTGGGTaGCACGCTAAAAGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDLLLPCGLLRAAASGVAQREAG*HAKSSR Trigger: CCTGCTGCTTTTAGCGTGCCACCCAGCTTCCCTCTG...AGCTACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CAA 90 bp | CTCTCTGAATCAGTAGGAAGTGCAGCCGCCCCAACACAGGGAAGGTaGGCCCTGCATAACCTTCTGATTTCCTCCATCACCACAGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LSESVGSAAAPTQGR*ALHNLLISSITTVL Trigger: CAACACTGTGGTGATGGAGGAAATCAGAAGGTTATGCAGGGCCAACCTTCCCTGTGTTGGGGCGGCTGCACTTCCTACTGATTCAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR-3UTR TCA 90 bp | ATAGATGAGCTCCTCCCCAACATAGCCAATAAAGTAGTGGGCACTGTTGGGCTTCCAGGCGGAGAGGGATaGGAAGCACTAGTGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: IDELLPNIANKVVGTVGLPGGEG*EALVVS Trigger: GGAGACCACTAGTGCTTCTCATCCCTCTCCGCCTGG...AAGCCCAACAGTGCCCACTACTTTATTGGCTATGTTGGGGAGGAGCTCATCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
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| 3UTR-3UTR GCA 90 bp | AGGGATCTCTTGCTACCTTGTGGGCTACTTAGAGCTGCTGCATCTGGAGTAGCTAACCACAGACCCAGGTaGCCAGGAGAAAGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: RDLLLPCGLLRAAASGVANHRPR*PGESRT Trigger: GGTTCTGCTTTCTCCTGGGCACCTGGGTCTGTGGTT...AGCTACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTCCCCACACTGCCATACTCTGCTCATATCTAGGGGGAGGAAAGGTGTTTCAGGGGTCCATCCTGTaGCCATGCACACTGATATCT | + |
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Preference number: 2 (lower is better) Translates to: GPPHTAILCSYLGGGKVFQGSIL*PCTLIS Trigger: AGATATCAGTGTGCATGGGCACAGGATGGACCCCTG...AAACACCTTTCCTCCCCCTAGATATGAGCAGAGTATGGCAGTGTGGGGAGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | CTTAGAGCTGCTGCATCTGGAGTAGCTCTGGCCTCACCCATCTGCGAGTTCTTGCACACTGCCATACTCTaGTCATATCTAGGGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRAAASGVALASPICEFLHTAIL*SYLGGG Trigger: TCCTCCCCCTAGATATGAGCAGAGTATGGCAGTGTG...CAAGAACTCGCAGATGGGTGAGGCCAGAGCTACTCCAGATGCAGCAGCTCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGGTTGTAAGCATTACAACTGCAGCCCAGTGTGCAAACAGAACTCTAGTCAGGTGAACAGCACTTaGCAGGGATGGGCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SWGCKHYNCSPVCKQNSSQVNST*QGWAGW Trigger: CCACCCAGCCCATCCCTGCCAAGTGCTGTTCACCTG...ACTAGAGTTCTGTTTGCACACTGGGCTGCAGTTGTAATGCTTACAACCCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTGGAGCTACCTGCTGTCTAAATGTCTATTGTGCACCAAAAAGCTGTAGTCAGAGGTGGCACAGGTaGACAGCACTTGGCAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: VPGATCCLNVYCAPKSCSQRWHR*TALGRD Trigger: ATCCCTGCCAAGTGCTGTTCACCTGTGCCACCTCTG...ACTACAGCTTTTTGGTGCACAATAGACATTTAGACAGCAGGTAGCTCCAGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGGTTGTAAGCATTACAACTGCAGCCCAGTGTGCAAACAGAACTCTAGTAAGCAGAACCAAAGCTaGTGTGCTGACCAGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SWGCKHYNCSPVCKQNSSKQNQS*CADQGW Trigger: CCAGCCCTGGTCAGCACATCAGCTTTGGTTCTGCTT...ACTAGAGTTCTGTTTGCACACTGGGCTGCAGTTGTAATGCTTACAACCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | AAAAACCTCTCCAGTCTCTCTACATCAGAAGAGTCTAGGGACAGGTTCAGGACATGCGGTGACACTGAGTaGCCAAGGCAGGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KNLSSLSTSEESRDRFRTCGDTE*PRQVWV Trigger: AACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCA...TGTCCTGAACCTGTCCCTAGACTCTTCTGATGTAGAGAGACTGGAGAGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGGTTTTCTCGAGACAGGGTTTCTTCTCTGTGTAGCCCTGGCCGTCCTGCTTGATAAATCACACTaGGCAGAGGAGACAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: AFGFLETGFLLCVALAVLLDKSH*AEETAQ Trigger: TTGGGCTGTCTCCTCTGCCCAGTGTGATTTATCAAG...CAGGACGGCCAGGGCTACACAGAGAAGAAACCCTGTCTCGAGAAAACCAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR CAA 90 bp | GACAAAGCTGGGAACAGGTTGCCTGGAGGGACCCTGAGGCAAGCTTaGTATGAGTGCTTTTCAACACTTTCTCCAACTGAAGAGCTACTG | + |
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Preference number: 2 (lower is better) Translates to: DKAGNRLPGGTLRQA*YECFSTLSPTEELL Trigger: CAGTAGCTCTTCAGTTGGAGAAAGTGTTGAAAAGCACTCATACAAAGCTTGCCTCAGGGTCCCTCCAGGCAACCTGTTCCCAGCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTGGAGCTACCTGCTGTCTAAATGTCTATTGTGCACCAAAAAGCTGTAGTACCCACTGCTCTTCCTaGCTAGGCCTTCTGATGAGC | + |
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Preference number: 2 (lower is better) Translates to: VPGATCCLNVYCAPKSCSTHCSS*LGLLMS Trigger: GCTCATCAGAAGGCCTAGTCAGGAAGAGCAGTGGGT...ACTACAGCTTTTTGGTGCACAATAGACATTTAGACAGCAGGTAGCTCCAGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGATCTCTTGCTACCTTGTGGGCTACTTAGAGCTGCTGCATCTGGAGTAACCCAGATGGGTTTCTaGGAAGAGAAAGAACATGGA | + |
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Preference number: 2 (lower is better) Translates to: GRDLLLPCGLLRAAASGVTQMGF*EEKEHG Trigger: TCCATGTTCTTTCTCTTCTCAGAAACCCATCTGGGT...TACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | AAAAACCTCTCCAGTCTCTCTACATCAGAAGAGTCTAGGGACAGGTTCAGGACAGCCAGATGGGAAGGCTaGTGTTCCACCAGCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: KNLSSLSTSEESRDRFRTARWEG*CSTSSN Trigger: GTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGC...TGTCCTGAACCTGTCCCTAGACTCTTCTGATGTAGAGAGACTGGAGAGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGAGCTGCTGCATCTGGAGTAGCTCTGGCCTCACCCATCTGCGAGTTCTTGAGAAGAGAAAGAACATaGAGGAAGGCTCAAGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LRAAASGVALASPICEFLRRERT*RKAQVA Trigger: TGCTACTTGAGCCTTCCTCCATGTTCTTTCTCTTCT...CAAGAACTCGCAGATGGGTGAGGCCAGAGCTACTCCAGATGCAGCAGCTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTATGAGTGCTTTTCAACACTTTCTCCAACTGAAGAGCTACTGGCTCATCTGGCCTCACCCATCTaGGAGTTCTTGGGAAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ALYECFSTLSPTEELLAHLASPI*EFLGRA Trigger: AGCCCTTCCCAAGAACTCGCAGATGGGTGAGGCCAG...ATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTGAAAAGCACTCATACAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGGATGGGCTGGGTGGATaGAATGCGGTGACACTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LAYYRFLPSRTITSFSCGDGLGG*NAVTLS Trigger: ACTCAGTGTCACCGCATTCCATCCACCCAGCCCATC...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGTCCAGTGGAGAATTCTaGAAGCTCCTGACCCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LAYYRFLPSRTITSFSCGSSGEF*KLLTHC Trigger: GCAGTGGGTCAGGAGCTTCCAGAATTCTCCACTGGA...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGTATGAGTGCTTTTCAACACTTTCTCCAACTGAAGAGCTACTGGCTCATCAGCACAATAGCTCCTaGCCTCAGGAAACAAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ALYECFSTLSPTEELLAHQHNSS*PQETSS Trigger: GGAGCTTGTTTCCTGAGGCCAGGAGCTATTGTGCTG...ATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTGAAAAGCACTCATACAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CCA 90 bp | CAACACTTTCTCCAACTGAAGAGCTACTGGCTCATTTTACATCTATTTCTGTATCAGGGATGGGCTGGGTaGATGGAATGCGGTGACACT | + |
|
Preference number: 2 (lower is better) Translates to: QHFLQLKSYWLILHLFLYQGWAG*MECGDT Trigger: AGTGTCACCGCATTCCATCCACCCAGCCCATCCCTG...ATACAGAAATAGATGTAAAATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR TCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGCTAGGATTGCCCCACTaGGATTTCACTAATAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: LAYYRFLPSRTITSFSCGLGLPH*DFTNRM Trigger: CATCCTATTAGTGAAATCTCAGTGGGGCAATCCTAG...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGTTGGGCCATTGTACTTaGGCCAGCAATTTTCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LAYYRFLPSRTITSFSCGLGHCT*ASNFPL Trigger: TAAAGGAAAATTGCTGGCCCAAGTACAATGGCCCAA...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR TCA 90 bp | GATTTCACTAATAGGATGAGATATTCCTCAAAATCTACTTGTCCCCTAGACAAAAATTCTGGAAGCTCCTaGCCCACTGCTCTTCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: DFTNRMRYSSKSTCPLDKNSGSS*PTALPD Trigger: GTCAGGAAGAGCAGTGGGTCAGGAGCTTCCAGAATT...TTTGTCTAGGGGACAAGTAGATTTTGAGGAATATCTCATCCTATTAGTGAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR TCA 90 bp | GATTTCACTAATAGGATGAGATATTCCTCAAAATCTACTTGTCCCCTAGACAAAGCCTTTCTCAAGCCCTaGGAGTTCCCTCAGGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: DFTNRMRYSSKSTCPLDKAFLKP*EFPQVV Trigger: TACAACCTGAGGGAACTCTCAGGGCTTGAGAAAGGC...TTTGTCTAGGGGACAAGTAGATTTTGAGGAATATCTCATCCTATTAGTGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR TCA 90 bp | GATTTCACTAATAGGATGAGATATTCCTCAAAATCTACTTGTCCCCTAGACAAATGTGCCCATGCACACTaGTATCTTTGGATTTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: DFTNRMRYSSKSTCPLDKCAHAH*YLWIFQ Trigger: TTGGAAAATCCAAAGATATCAGTGTGCATGGGCACA...TTTGTCTAGGGGACAAGTAGATTTTGAGGAATATCTCATCCTATTAGTGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR TCA 72 bp | GCATTAAGGCCTCCAGGCACCATAGTCCTTGGTCCATaGGCAGAGCAGGCCCTCGGGACAGAGGTGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ALRPPGTIVLGP*AEQALGTEVAQ Trigger: CTGTGCCACCTCTGTCCCGAGGGCCTGCTCTGCTCATGGACCAAGGACTATGGTGCCTGGAGGCCTTAATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | GCACAGGTGAACAGCACTTGGCAGGGATGGGCTGGGTaGATGGAATGCGGTGACACTGAGTGCCCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQVNSTWQGWAG*MECGDTECPRQ Trigger: CTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTGCCAAGTGCTGTTCACCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGATGGGCTGGGTGGATGGAATGCGGTGACACTGAGTGCCCAAGGCAGGTCAGCTGGGATAGCTCATaGCCTGGGTCCCCAGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QGWAGWMECGDTECPRQVSWDSS*PGSPEV Trigger: AACTTCTGGGGACCCAGGCAATGAGCTATCCCAGCT...GACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| 3UTR GCA 72 bp | GGATGGGCTGGGTGGATGGAATGCGGTGACACTGAGTaGCCAAGGCAGGTCTGGGTTCTCAAAGCACCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWAGWMECGDTE*PRQVWVLKAPQ Trigger: TTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
||
| 3UTR GCA 72 bp | ACCAGTGGGCACGGTGTCTCAAGCATAGAGCAGCTCTaGTCCCTTCCCTTTCCTCCCAGAGGGAAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TSGHGVSSIEQL*SLPFPPRGKLG Trigger: ACCCAGCTTCCCTCTGGGAGGAAAGGGAAGGGAGCAGAGCTGCTCTATGCTTGAGACACCGTGCCCACTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR GCA 72 bp | AGGTTCAGGACATCCTGGCAGGCCAGATGGGAAGGCTaGTGTTCCACCAGCTCAAACATGGGCAGGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: RFRTSWQARWEG*CSTSSNMGRAP Trigger: AGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| 3UTR CCA 72 bp | CAGCGAGACCCTGGGCGACAGCAGCACAATAGCTCCTaGCCTCAGGAAACAAGCTCCGGGGGAATGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QRDPGRQQHNSS*PQETSSGGMET Trigger: AGTTTCCATTCCCCCGGAGCTTGTTTCCTGAGGCCAGGAGCTATTGTGCTGCTGTCGCCCAGGGTCTCGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR TCA 72 bp | GGCCGTCCTGGAACTCACTCTAAACCAGGCCGGCCTTaGACTCAGAAATCCGACTGCCTCTGCCTCCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GRPGTHSKPGRP*TQKSDCLCLPS Trigger: ACTTGGGAGGCAGAGGCAGTCGGATTTCTGAGTTCAAGGCCGGCCTGGTTTAGAGTGAGTTCCAGGACGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | CTGCTCCCTTCCCTTTCCTCCCAGAGGGAAGCTGGGTaGCACGCTAAAAGCAGCAGGCGGTGTGTCATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLPSLSSQREAG*HAKSSRRCVMK Trigger: TTTCATGACACACCGCCTGCTGCTTTTAGCGTGCCACCCAGCTTCCCTCTGGGAGGAAAGGGAAGGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | CCAGATGGGAAGGCTGCTGTTCCACCAGCTCAAACATaGGCAGGGCACCTCCAAGCTGGGATAGCTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: PDGKAAVPPAQT*AGHLQAGIAHC Trigger: GCAATGAGCTATCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| 3UTR CCA 72 bp | TCTAGGGACAGGTTCAGGACATCCTGGCAGGCCAGATaGGAAGGCTGCTGTTCCACCAGCTCAAACATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRDRFRTSWQAR*EGCCSTSSNMG Trigger: GCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| 3UTR CCA 72 bp | TGCTTTCCCACTGAGGTAGCCCTTGATAAATCACACTaGGCAGAGGAGACAGCCCAAAGCTCACCCCGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CFPTEVALDKSH*AEETAQSSPRP Trigger: TGGGCGGGGTGAGCTTTGGGCTGTCTCCTCTGCCCAGTGTGATTTATCAAGGGCTACCTCAGTGGGAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR TCA 72 bp | GGTGCCCAGGAGAAAGCAGAACCAAAGCTGATGTGCTaGCCAGGGCTGGCAGTGTCAGAATCCAGTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GAQEKAEPKLMC*PGLAVSESSGE Trigger: TTCTCCACTGGATTCTGACACTGCCAGCCCTGGTCAGCACATCAGCTTTGGTTCTGCTTTCTCCTGGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR TCA 72 bp | GCTCTCGACCTGGTTAGCCTGGCTGCCTCTGCCTCCTaGGTAGCTGCCATTGACTTTGTATGCCAGCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALDLVSLAASAS*VAAIDFVCQHY Trigger: GTAATGCTGGCATACAAAGTCAATGGCAGCTACTCAGGAGGCAGAGGCAGCCAGGCTAACCAGGTCGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CAA 90 bp | AACTGCAGCCCAGTGTGCAAACAGAACTCTAGTCCCCTAGAACTCTTAACCACTACAGGTGAACAGCACTaGGCAGGGATGGGCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NCSPVCKQNSSPLELLTTTGEQH*AGMGWV Trigger: CACCCAGCCCATCCCTGCCAAGTGCTGTTCACCTGT...AGTGGTTAAGAGTTCTAGGGGACTAGAGTTCTGTTTGCACACTGGGCTGCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CAA 90 bp | AGGGATCTCTTGCTACCTTGTGGGCTACTTAGAGCTGCTGCATCTGGAGTAGCTGACAGGCCCTTTGTGTaGGGGTTTAGGCAGTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RDLLLPCGLLRAAASGVADRPFV*GFRQSD Trigger: GTCAGACTGCCTAAACCCCAACACAAAGGGCCTGTC...AGCTACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR TCA 72 bp | GCCCAGAAAGCCAGGGTTAGGTGGCAGGTATGGAAATaGGTGCCAAGGAGGTCTGAACTCTTCACTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AQKARVRWQVWK*VPRRSELFTCE Trigger: CTCACAAGTGAAGAGTTCAGACCTCCTTGGCACTCATTTCCATACCTGCCACCTAACCCTGGCTTTCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | CTGATGAGCGACTTCATGTGGACAGGCCCTTTGTGTTaGGGTTTAGGCAGTCTGACTCCAAGCATTAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LMSDFMWTGPLC*GLGSLTPSIKA Trigger: GGCCTTAATGCTTGGAGTCAGACTGCCTAAACCCCAACACAAAGGGCCTGTCCACATGAAGTCGCTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CAA 90 bp | GGGCATCATGAAACAGTGCTTCAGCGTCTCCACATAGGCCTCATTGATGTCTGTCCAACACAGGGAAGGTaGGCCCTGCATAACCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GHHETVLQRLHIGLIDVCPTQGR*ALHNLL Trigger: CAGAAGGTTATGCAGGGCCAACCTTCCCTGTGTTGG...ACAGACATCAATGAGGCCTATGTGGAGACGCTGAAGCACTGTTTCATGATGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| 3UTR CCA 72 bp | ATATTCCTCAAAATCTACTTGTCCCCTAGACAAAGCTaGGAACAGGTTGCCTGGAGGGACCCTGAGGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IFLKIYLSPRQS*EQVAWRDPEAS Trigger: GCTTGCCTCAGGGTCCCTCCAGGCAACCTGTTCCCAGCTTTGTCTAGGGGACAAGTAGATTTTGAGGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | AGGGAGAGGGAAGCCTTCCCCTTGGGCCATTGTACTTaGGCCAGCAATTTTCCTTTATTTGGACTCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: REREAFPLGHCT*ASNFPLFGLKR Trigger: CCTCTTGAGTCCAAATAAAGGAAAATTGCTGGCCCAAGTACAATGGCCCAAGGGGAAGGCTTCCCTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGGTCAGAAGGTGTTAGATCTTCTGGAGCTGGGGTTGTAAGCATTACAACTCTAGGAGCTTGTCAGTaGCTCCAGGGTTCAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MRSEGVRSSGAGVVSITTLGACQ*LQGSGV Trigger: GACCCCTGAACCCTGGAGCAACTGACAAGCTCCTAG...AGTTGTAATGCTTACAACCCCAGCTCCAGAAGATCTAACACCTTCTGACCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | TGCCAAGGAGGTCTGAACTCTTCACTTGTGAGTGCCTaGAGCTACCTGCTGTCTAAATGTCTATTGTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: CQGGLNSSLVSA*SYLLSKCLLCT Trigger: GGTGCACAATAGACATTTAGACAGCAGGTAGCTCCAGGCACTCACAAGTGAAGAGTTCAGACCTCCTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR GCA 72 bp | CTTGTCAGTTGCTCCAGGGTTCAGGGGTCCATCCTGTaGCCATGCACACTGATATCTTTGGATTTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVSCSRVQGSIL*PCTLISLDFPN Trigger: ATTTGGAAAATCCAAAGATATCAGTGTGCATGGGCACAGGATGGACCCCTGAACCCTGGAGCAACTGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR GCA 72 bp | TTGCCTGGAGGGACCCTGAGGCAAGCTTTGTATGAGTaGTTTTCAACACTTTCTCCAACTGAAGAGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LPGGTLRQALYE*FSTLSPTEELL Trigger: CAGTAGCTCTTCAGTTGGAGAAAGTGTTGAAAAGCACTCATACAAAGCTTGCCTCAGGGTCCCTCCAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR GCA 72 bp | TCCAAAGCAAGTAGCAGCCTTGGGATTCTCTCCATATaGTTTCCCACTGAGGTAGCCCTTGATAAATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SKASSSLGILSI*FPTEVALDKSH Trigger: GTGTGATTTATCAAGGGCTACCTCAGTGGGAAAGCATATGGAGAGAATCCCAAGGCTGCTACTTGCTTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR TCA 72 bp | AAGAGGGCAGGTAGGCATCTTCTAGGATTGCCCCACTaGGATTTCACTAATAGGATGAGATATTCCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KRAGRHLLGLPH*DFTNRMRYSSK Trigger: TTTTGAGGAATATCTCATCCTATTAGTGAAATCTCAGTGGGGCAATCCTAGAAGATGCCTACCTGCCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CCA 72 bp | AGTGCTTTTCAACACTTTCTCCAACTGAAGAGCTACTaGCTCATTTTACATCTATTTCTGTATGTACCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SAFQHFLQLKSY*LILHLFLYVPM Trigger: CATGGGTACATACAGAAATAGATGTAAAATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTGAAAAGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR GCA 90 bp | CAGGGATGGGCTGGGTGGATGGAATGCGGTGACACTGAGTGCCCAAGGCAGGTCATCCTAGAGGGAGGGTaGTGGCAGTGGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGWAGWMECGDTECPRQVILEGG*WQWKLS Trigger: CGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGAT...GACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAGGCCATCCCCCAACCCATCCTAGAGGGAGGGTaGTGGCAGTGGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGSQSTPMRAMEAIPQPILEGG*WQWKLS Trigger: CGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGAT...GGGTTGGGGGATGGCCTCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAGGAGGGTGCTGGCAGTaGAAGCTCTCGTCGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRSGFSKHPNEGHGGGCWQ*KLSSGM Trigger: CATCCCCGACGAGAGCTTCCACTGCCAGCACCCTCC...TCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAAACATGGGCAGGGCACCTCCAAGCTGGGATAGCTCATTGCCTGGGTCCCCTAGAGGGAGGGTGCTaGCAGTGGAAGCTCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AQTWAGHLQAGIAHCLGPLEGGC*QWKLSS Trigger: CGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAG...GGGACCCAGGCAATGAGCTATCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| CDS-3UTR TCA 90 bp | CACAGACCCAGGTGCCCAGGAGAAAGCAGAACCAAAGCTGATGTGCTGACCAGGACCCCAGCCTGTGTCTaGAGTAGGGCCAGTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRPRCPGESRTKADVLTRTPACV*SRASSP Trigger: GGGGGAACTGGCCCTACTTCAGACACAGGCTGGGGT...CCTGGTCAGCACATCAGCTTTGGTTCTGCTTTCTCCTGGGCACCTGGGTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | GGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAGGCCATCCCCCAACCCGGGACTGGGGCATCATaGAACAGTGCTTCAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGSQSTPMRAMEAIPQPGTGAS*NSASAS Trigger: AGACGCTGAAGCACTGTTTCATGATGCCCCAGTCCC...GGGTTGGGGGATGGCCTCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAGGCGTCCACACCGAAGCATaGAACCCCAGCCTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAQGRSGFSKHPNEGHGGVHTEA*NPSLCL Trigger: CAGACACAGGCTGGGGTTGCATGCTTCGGTGTGGAC...GCCTCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCTAGGGACAGGTTCAGGACATCCTGGCAGGCCAGATGGGAAGGCTGCTGGAGGGTGCTGGCAGTaGAAGCTCTCGTCGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSLGTGSGHPGRPDGKAAGGCWQ*KLSSGM Trigger: CATCCCCGACGAGAGCTTCCACTGCCAGCACCCTCC...AGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGACTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAGGCCATCCCCCCACATAGGCCTCATTaGTGTCTGTCAGTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSQSTPMRAMEAIPPHRPH*CLSVPG Trigger: GCCTGGGACTGACAGACATCAATGAGGCCTATGTGG...GGGGATGGCCTCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACCTGCCTT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR GCA 90 bp | GGGATGAGAAGCACTAGTGGTCTCCAAGCCGATGGCCTGTTGGTGACTTCAGCTGTCCACACCGAAGCATaGAACCCCAGCCTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GMRSTSGLQADGLLVTSAVHTEA*NPSLCL Trigger: CAGACACAGGCTGGGGTTGCATGCTTCGGTGTGGAC...AGCTGAAGTCACCAACAGGCCATCGGCTTGGAGACCACTAGTGCTTCTCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGGTTTTCTCGAGACAGGGTTTCTTCTCTGTGTAGCCCTGGCCGTCCTGCTAGAGGGAGGGTGCTaGCAGTGGAAGCTCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AFGFLETGFLLCVALAVLLEGGC*QWKLSS Trigger: CGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAG...CAGGACGGCCAGGGCTACACAGAGAAGAAACCCTGTCTCGAGAAAACCAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CAA 72 bp | GAATCCCAGGACCACAACTCCAGAAGCCCTAGGAGCTaGTCAGTTGCTCCAGGGTTCAGGGGTCCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESQDHNSRSPRS*SVAPGFRGPSC Trigger: ACAGGATGGACCCCTGAACCCTGGAGCAACTGACAAGCTCCTAGGGCTTCTGGAGTTGTGGTCCTGGGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTCTTGCTACCTTGTGGGCTACTTAGAGCTGCTGCATCTGGAGTAGCTCCAGGCGGAGAGGGATaGGAAGCACTAGTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLLLPCGLLRAAASGVAPGGEG*EALVVS Trigger: GGAGACCACTAGTGCTTCTCATCCCTCTCCGCCTGG...AGCTACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | GAGCTCCTCCCCAACATAGCCAATAAAGTAGTGGGCACTGTTGGGCTTCCCTCCCGGCATACCAGGGCCTaGGCAAAGATCATCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELLPNIANKVVGTVGLPSRHTRA*AKIICP Trigger: TGGACAGATGATCTTTGCCCAGGCCCTGGTATGCCG...GGAGGGAAGCCCAACAGTGCCCACTACTTTATTGGCTATGTTGGGGAGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAACATAGCCAATAAAGTAGTGGGCACTGTTGGGCTTCCCTCCAATAACGGCTGCCTCTTCCGCTaGGTCCACCTCCAATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPNIANKVVGTVGLPSNNGCLFR*VHLQSR Trigger: TCGAGATTGGAGGTGGACTCAGCGGAAGAGGCAGCC...GTTATTGGAGGGAAGCCCAACAGTGCCCACTACTTTATTGGCTATGTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGCTGTTCCACCAGCTCAAACATGGGCAGGGCACCTCCAAGCTGGGATAGCTACAGACCTTTTTaGCTTGCTGACACCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EGCCSTSSNMGRAPPSWDSYRPF*LADTSR Trigger: ACGACTGGTGTCAGCAAGTCAAAAAGGTCTGTAGCT...ATCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCGGTGACACTGAGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACCCCAAAAAACCCCACAGCAATaGACGGGTCAAGCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ECGDTECPRQVWVLKAPQKTPQQ*TGQALQ Trigger: TTGGAGAGCTTGACCCGTCCATTGCTGTGGGGTTTT...TTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000186811.2 |
||
| 3UTR CAA 72 bp | ATGAGAAGCACTAGTGGTCTCCAAGCCGATGGCCTGTaGGTGACTTCAGCTCCAGCAGGGAACCCATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: MRSTSGLQADGL*VTSAPAGNPLQ Trigger: CTGTAATGGGTTCCCTGCTGGAGCTGAAGTCACCAACAGGCCATCGGCTTGGAGACCACTAGTGCTTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR TCA 90 bp | GCTCAAACATGGGCAGGGCACCTCCAAGCTGGGATAGCTCATTGCCTGGGTCCCACCTTTTTGACTTGCTaGCACCAGTCGTTAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTWAGHLQAGIAHCLGPTFLTC*HQSLKS Trigger: AGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGGT...GGGACCCAGGCAATGAGCTATCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCCCAAGGCAGGTCTGGGTTCTCAAAGCACCCCAATGAGGGCCATGGAGGCAGTTCCCCCAATAGCTaGAAAGTTTCTCCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SAQGRSGFSKHPNEGHGGSSPNS*KVSPVC Trigger: ACATACAGGAGAAACTTTCCAGCTATTGGGGGAACT...GCCTCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CAA 72 bp | GGCCTTCTGATGAGCGACTTCATGTGGACAGGCCCTTaGTGTTGGGGTTTAGGCAGTCTGACTCCAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLLMSDFMWTGP*CWGLGSLTPSI Trigger: AATGCTTGGAGTCAGACTGCCTAAACCCCAACACAAAGGGCCTGTCCACATGAAGTCGCTCATCAGAAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CAA 72 bp | AAGCCAGCTGAGTACAGGGAGAGGGAAGCCTTCCCCTaGGGCCATTGTACTTGGGCCAGCAATTTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPAEYREREAFP*GHCTWASNFPL Trigger: TAAAGGAAAATTGCTGGCCCAAGTACAATGGCCCAAGGGGAAGGCTTCCCTCTCCCTGTACTCAGCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | CCTCCAATAACACCCAGGGACTGGGGCATCATGAAACAGTGCTTCAGCGTCTCCAATCCAAACAGGCTCTaGGGTCTCAGGGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPITPRDWGIMKQCFSVSNPNRL*GLREIF Trigger: GAAGATTTCCCTGAGACCTCAGAGCCTGTTTGGATT...GGAGACGCTGAAGCACTGTTTCATGATGCCCCAGTCCCTGGGTGTTATTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCTGACTCCAAGCATTAAGGCCTCCAGGCACCATAGTCCTTGGTCCATGCACAGTGTTGTCCATTaGTATGTGAACAGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLTPSIKASRHHSPWSMHSVVH*YVNSQG Trigger: TCCTTGGCTGTTCACATAGCAATGGACAACACTGTG...CATGGACCAAGGACTATGGTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTCAGAAGGTGTTAGATCTTCTGGAGCTGGGGTTGTAAGCATTACAACTTCCTGGCAGGCCAGATaGGAAGGCTGCTGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: MRSEGVRSSGAGVVSITTSWQAR*EGCCST Trigger: GGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGA...AGTTGTAATGCTTACAACCCCAGCTCCAGAAGATCTAACACCTTCTGACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CAA 72 bp | CAGGGAGAGGGAAGCCTTCCCCTTGGGCCATTGTACTaGGGCCAGCAATTTTCCTTTATTTGGACTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGEGSLPLGPLY*GQQFSFIWTQE Trigger: CTCTTGAGTCCAAATAAAGGAAAATTGCTGGCCCAAGTACAATGGCCCAAGGGGAAGGCTTCCCTCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTCTTGCTACCTTGTGGGCTACTTAGAGCTGCTGCATCTGGAGTAGCTAATCCAAACAGGCTCTaGGGTCTCAGGGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDLLLPCGLLRAAASGVANPNRL*GLREIF Trigger: GAAGATTTCCCTGAGACCTCAGAGCCTGTTTGGATT...AGCTACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | TACCACAGCAATGGACGGGTCAAGCTCTCCAATGCCCATCCTAGAGGGAGGGTGTTTCGTCCTTCTCTGTaGAAATGCTGTATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YHSNGRVKLSNAHPRGRVFRPSL*KCCIFC Trigger: GCAGAAAATACAGCATTTTCACAGAGAAGGACGAAA...CACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCATTGCTGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR TCA 90 bp | GGCAGTCTGACTCCAAGCATTAAGGCCTCCAGGCACCATAGTCCTTGGTCCATGAGCTTTTTGACTTGCTaGCACCAGTCGTTAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLTPSIKASRHHSPWSMSFLTC*HQSLKS Trigger: AGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGCT...CATGGACCAAGGACTATGGTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | GGCAGTCTGACTCCAAGCATTAAGGCCTCCAGGCACCATAGTCCTTGGTCCATGTTTCGTCCTTCTCTGTaGAAATGCTGTATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLTPSIKASRHHSPWSMFRPSL*KCCIFC Trigger: GCAGAAAATACAGCATTTTCACAGAGAAGGACGAAA...CATGGACCAAGGACTATGGTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | GCTTTGTATGAGTGCTTTTCAACACTTTCTCCAACTGAAGAGCTACTGGCTCATGGGGGTCCAGATAGATaGGCTCCTCCCCAACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALYECFSTLSPTEELLAHGGPDR*APPQHS Trigger: GCTATGTTGGGGAGGAGCTCATCTATCTGGACCCCC...ATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTGAAAAGCACTCATACAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR GCA 90 bp | TACCACAGCAATGGACGGGTCAAGCTCTCCAATGCCCATCCTAGAGGGAGGGTGAAACCAAAGTCTGGATaGAACATCAGACAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YHSNGRVKLSNAHPRGRVKPKSG*NIRQDF Trigger: GAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTT...CACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCATTGCTGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR GCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGGCCAGATGGGAAGGCTaGTGTTCCACCAGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAYYRFLPSRTITSFSCGARWEG*CSTSSN Trigger: GTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGC...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTGTAGTGTGGGGGTCCAGATAGATGAGCTCCTCCCCAACATAGCCAATAGTTCCCCCAATAGCTaGAAAGTTTCTCCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: RLCSVGVQIDELLPNIANSSPNS*KVSPVC Trigger: ACATACAGGAGAAACTTTCCAGCTATTGGGGGAACT...ATTGGCTATGTTGGGGAGGAGCTCATCTATCTGGACCCCCACACTACACAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000185482.7 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGCGGCATACCAGGGCCTaGGCAAAGATCATCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAYYRFLPSRTITSFSCGRHTRA*AKIICP Trigger: TGGACAGATGATCTTTGCCCAGGCCCTGGTATGCCG...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGGAGCTACCTGCTGTCTAAATGTCTATTGTGCACCAAAAAGCTGTAGTATAACACCCAGGGACTaGGGCATCATGAAACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPGATCCLNVYCAPKSCSITPRD*GIMKQC Trigger: GCACTGTTTCATGATGCCCCAGTCCCTGGGTGTTAT...ACTACAGCTTTTTGGTGCACAATAGACATTTAGACAGCAGGTAGCTCCAGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | CAACACTTTCTCCAACTGAAGAGCTACTGGCTCATTTTACATCTATTTCTGTATGGCTGCCTCTTCCGCTaGGTCCACCTCCAATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QHFLQLKSYWLILHLFLYGCLFR*VHLQSR Trigger: TCGAGATTGGAGGTGGACTCAGCGGAAGAGGCAGCC...ATACAGAAATAGATGTAAAATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTCAGAAGGTGTTAGATCTTCTGGAGCTGGGGTTGTAAGCATTACAACTGCTGGGATAGCTTTTTaGCTTGCTGACACCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MRSEGVRSSGAGVVSITTAGIAF*LADTSR Trigger: ACGACTGGTGTCAGCAAGTCAAAAAGCTATCCCAGC...AGTTGTAATGCTTACAACCCCAGCTCCAGAAGATCTAACACCTTCTGACCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCCCCACACTGCCATACTCTGCTCATATCTAGGGGGAGGAAAGGTGTTTAAACCAAAGTCTGGATaGAACATCAGACAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPPHTAILCSYLGGGKVFKPKSG*NIRQDF Trigger: GAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTT...AAACACCTTTCCTCCCCCTAGATATGAGCAGAGTATGGCAGTGTGGGGAGGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | CAACACTTTCTCCAACTGAAGAGCTACTGGCTCATTTTACATCTATTTCTGTATCCACCAGCTCAAACATaGGCAGGGCACCTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHFLQLKSYWLILHLFLYPPAQT*AGHLQA Trigger: AGCTTGGAGGTGCCCTGCCCATGTTTGAGCTGGTGG...ATACAGAAATAGATGTAAAATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR TCA 90 bp | CTAGCTTACTATAGATTTCTGCCCTCTAGGACCATAACAAGTTTCAGCTGTGGGTTGTCCATTGCTATGTaGACAGCCAAGGAACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAYYRFLPSRTITSFSCGLSIAM*TAKELH Trigger: ATGGAGTTCCTTGGCTGTTCACATAGCAATGGACAA...CCCACAGCTGAAACTTGTTATGGTCCTAGAGGGCAGAAATCTATAGTAAGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CCA 90 bp | CAACACTTTCTCCAACTGAAGAGCTACTGGCTCATTTTACATCTATTTCTGTATTTCGGCCCGTACCACTaGCCTATAGACTTGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QHFLQLKSYWLILHLFLYFGPYH*PIDLPS Trigger: CGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAA...ATACAGAAATAGATGTAAAATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| 3UTR CAA 72 bp | AGACTGACCTGGGAAGTGCCCCAGAAATTCATGTCTTaGTTAAACAACTTCAAACAGGGCTTTAATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLTWEVPQKFMS*LNNFKQGFNSK Trigger: TTTGGAATTAAAGCCCTGTTTGAAGTTGTTTAACAAAGACATGAATTTCTGGGGCACTTCCCAGGTCAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CAA 90 bp | CTTAGAGCTGCTGCATCTGGAGTAGCTCTGGCCTCACCCATCTGCGAGTTCTTGCACTGGCCTATAGACTaGCCTTCGCCAACTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LRAAASGVALASPICEFLHWPID*PSPTPI Trigger: AATGGGAGTTGGCGAAGGCAAGTCTATAGGCCAGTG...CAAGAACTCGCAGATGGGTGAGGCCAGAGCTACTCCAGATGCAGCAGCTCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS TCA 90 bp | GTGCAGCCGCCCCAACACAGGGAAGGTTGGCCCTGCATAACCTTCTaGTTTCCTCCATCACCACAGTGTTGTCCATTGCTATGTGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: VQPPQHREGWPCITF*FPPSPQCCPLLCEQ Trigger: CTGTTCACATAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGGTTATGCAGGGCCAACCTTCCCTGTGTTGGGGCGGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS CCA 90 bp | GCCAAGGAACTCCATGTGTCGAATACAGCAAGTTTCTTGAGGACCTaGGCAACAGTGTTCGGCCCGTACCACTGGCCTATAGACTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AKELHVSNTASFLRT*ATVFGPYHWPIDLP Trigger: AGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACATGGAGTTCCTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CAA 90 bp | GCTTTTGGTTTTCTCGAGACAGGGTTTCTTCTCTGTGTAGCCCTGGCCGTCCTGTTCGCCAACTCCCATTaGCGCTATCTGATGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: AFGFLETGFLLCVALAVLFANSH*RYLMDG Trigger: TCCATCCATCAGATAGCGCAAATGGGAGTTGGCGAA...CAGGACGGCCAGGGCTACACAGAGAAGAAACCCTGTCTCGAGAAAACCAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CAA 90 bp | GCTTTTGGTTTTCTCGAGACAGGGTTTCTTCTCTGTGTAGCCCTGGCCGTCCTGAATACAGCAAGTTTCTaGAGGACCTGGGCAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFGFLETGFLLCVALAVLNTASF*RTWATV Trigger: CACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATT...CAGGACGGCCAGGGCTACACAGAGAAGAAACCCTGTCTCGAGAAAACCAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGGTTGTAAGCATTACAACTGCAGCCCAGTGTGCAAACAGAACTCTAGTCCACAGTGTTGTCCATaGCTATGTGAACAGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWGCKHYNCSPVCKQNSSPQCCP*LCEQPR Trigger: CCTTGGCTGTTCACATAGCAATGGACAACACTGTGG...ACTAGAGTTCTGTTTGCACACTGGGCTGCAGTTGTAATGCTTACAACCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CAA 90 bp | CAACACTTTCTCCAACTGAAGAGCTACTGGCTCATTTTACATCTATTTCTGTATCCAACACAGGGAAGGTaGGCCCTGCATAACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHFLQLKSYWLILHLFLYPTQGR*ALHNLL Trigger: CAGAAGGTTATGCAGGGCCAACCTTCCCTGTGTTGG...ATACAGAAATAGATGTAAAATGAGCCAGTAGCTCTTCAGTTGGAGAAAGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS-3UTR CAA 90 bp | AAAAACCTCTCCAGTCTCTCTACATCAGAAGAGTCTAGGGACAGGTTCAGGACAACAGACCTTTTTGACTaGCTGACACCAGTCGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNLSSLSTSEESRDRFRTTDLFD*LTPVVK Trigger: TTTAACGACTGGTGTCAGCAAGTCAAAAAGGTCTGT...TGTCCTGAACCTGTCCCTAGACTCTTCTGATGTAGAGAGACTGGAGAGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
||
| CDS GCA 90 bp | CCCAATAGCTGGAAAGTTTCTCCTGTATGTAAACCAAAGTCTGGATaGAACATCAGACAAGATTTCGTCCTTCTCTGTGAAAATGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PNSWKVSPVCKPKSG*NIRQDFVLLCENAV Trigger: TACAGCATTTTCACAGAGAAGGACGAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTTACATACAGGAGAAACTTTCCAGCTATTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027502.16 ENSMUST00000149436.8 ENSMUST00000185482.7 |
||
| CDS GCA 90 bp | ATCAATAGCTGGAAAGTTTCTCCTGTATGTAAACCAAAGTCTGGATaGAACATCAGACAAGATTTCGTCCTTCTCTGTGAAAATGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: INSWKVSPVCKPKSG*NIRQDFVLLCENAV Trigger: TACAGCATTTTCACAGAGAAGGACGAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTTACATACAGGAGAAACTTTCCAGCTATTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187824.7 |
||
| CDS CCA 72 bp | TTGAGGACCTGGGCAACAGTGTTCGGCCCGTACCACTaGCCTATAGACTTGCCTTCGCCAACTCCCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRTWATVFGPYH*PIDLPSPTPIC Trigger: GCAAATGGGAGTTGGCGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027502.16 ENSMUST00000187824.7 |
||
| CDS CCA 72 bp | CTCCAATCTCGACCTAAGTGCCGGCATACCAGGGCCTaGGCAAAGATCATCTGTCCACACCGAAGCATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQSRPKCRHTRA*AKIICPHRSMQ Trigger: TTGCATGCTTCGGTGTGGACAGATGATCTTTGCCCAGGCCCTGGTATGCCGGCACTTAGGTCGAGATTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027502.16 ENSMUST00000149436.8 ENSMUST00000185482.7 |
||
| CDS CAA 72 bp | GCCAAGGAACTCCATGTGTCGAATACAGCAAGTTTCTaGAGGACCTGGGCAACAGTGTTCGGCCCGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: AKELHVSNTASF*RTWATVFGPYH Trigger: GTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACATGGAGTTCCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS TCA 72 bp | CCAAGGAACTCCATGTGTCGAATACAGCAAGTTTCTTaGGGACCTGGGCAACAGTGTTCGGCCCGTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: PRNSMCRIQQVS*GPGQQCSARTT Trigger: AGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACATGGAGTTCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
||
| CDS CCA 72 bp | CTCCATGTGTCGAATACAGCAAGTTTCTTGAGGACCTaGGCAACAGTGTTCGGCCCGTACCACTGGCCTATA | + |
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Preference number: 6 (lower is better) Translates to: LHVSNTASFLRT*ATVFGPYHWPI Trigger: TATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| CDS TCA 72 bp | CCCCAACACAGGGAAGGTTGGCCCTGCATAACCTTCTaGTTTCCTCCATCACCACAGTGTTGTCCATTGCTA | + |
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Preference number: 6 (lower is better) Translates to: PQHREGWPCITF*FPPSPQCCPLL Trigger: TAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGGTTATGCAGGGCCAACCTTCCCTGTGTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| CDS CAA 72 bp | TGGCTCTGGACAGGGGCAGCTACAGACCTTTTTGACTaGCTGACACCAGTCGTTAAAGTCTTCCTCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: WLWTGAATDLFD*LTPVVKVFLRL Trigger: AAGACGGAGGAAGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGGTCTGTAGCTGCCCCTGTCCAGAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| CDS TCA 72 bp | AGGGCACCTCCAAGCTGGGATAGCTTTTTGACTTGCTaGCACCAGTCGTTAAAGTCTTCCTCCGTCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: RAPPSWDSFLTC*HQSLKSSSVLQ Trigger: CTGTAAGACGGAGGAAGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGCTATCCCAGCTTGGAGGTGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027502.16 |
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| CDS TCA 72 bp | TCTGGACAGGGGCAGCTACAGACCTTTTTGACTTGCTaGCACCAGTCGTTAAAGTCTTCCTCCGTCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: SGQGQLQTFLTC*HQSLKSSSVLQ Trigger: CTGTAAGACGGAGGAAGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGGTCTGTAGCTGCCCCTGTCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186811.2 |
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| CDS CAA 72 bp | CCACTGGCCTATAGACTTGCCTTCGCCAACTCCCATTaGCGCTATCTGATGGATGGAATAGTAGCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLAYRLAFANSH*RYLMDGIVAVL Trigger: AAGGACAGCTACTATTCCATCCATCAGATAGCGCAAATGGGAGTTGGCGAAGGCAAGTCTATAGGCCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027502.16 ENSMUST00000149436.8 ENSMUST00000187824.7 |
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