Pregenerated sensors for ATG16L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026289Ensembl transcript IDs: ENSMUST00000027512.13, ENSMUST00000113186.8, ENSMUST00000113190.3, ENSMUST00000144047.8
Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTaGTCGGCCACCTGCTGTGCACGTGCAGTGATGCAGGGTAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: THRQWLASPLSAPGE*SATCCARAVMQGKD Trigger: ATCTTTACCCTGCATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR GCA 90 bp | CTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGCAGAACTaGTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LGAKQQVGFGQGRQN*CPSSRAPALMLSLL Trigger: CAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGTTCTGCCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | GTAGGCTTCTCTTACCAACACTGCACTGCACGCACAGGCAGTGGCTaGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: VGFSYQHCTARTGSG*PHHSLLQVSARPPA Trigger: AGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAAGAGAAGCCTAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | CTAGGTAGGCTTCTCTTACCAACACTGCACTGCACGCACAGGCAGTaGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: LGRLLLPTLHCTHRQ*LASPLSAPGECSAT Trigger: GGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAAGAGAAGCCTACCTAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR TCA 90 bp | GGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTaGGCCCCCTGGGTAAGTGACTCCACAGAAAGGGGGCGAGCATCA | + |
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Preference number: 1 (lower is better) Translates to: GGQARIWFPLTQCLQ*APWVSDSTERGRAS Trigger: TGATGCTCGCCCCCTTTCTGTGGAGTCACTTACCCAGGGGGCTCACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | CTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTaGGGTTGTCCTTGGCACTGTGTCCAGTGGGGAGACCCAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: LWKDGKSTGDPIPGV*GCPWHCVQWGDPAG Trigger: CCCTGCTGGGTCTCCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR GCA 90 bp | TGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCACCTaGTGTGCACGTGCAGTGATGCAGGGTAAAGATGTGTTTCTCACC | + |
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Preference number: 1 (lower is better) Translates to: WLASPLSAPGECSAT*CARAVMQGKDVFLT Trigger: GGTGAGAAACACATCTTTACCCTGCATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | TCTCAACTTCCAACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTaGGTTTCGGGCAGGGCAGGCAGAACTGCTGTCCCTCTTCCCGAG | + |
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Preference number: 1 (lower is better) Translates to: SQLPTPQTLWEQSNR*VSGRAGRTAVPLPE Trigger: CTCGGGAAGAGGGACAGCAGTTCTGCCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTTGGAAGTTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | TGTGCCCTGGCCAGCGAATCTCAACTTCCAACGCCACAAACTCTCTaGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: CALASESQLPTPQTL*EQSNRWVSGRAGRT Trigger: AGTTCTGCCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTTGGAAGTTGAGATTCGCTGGCCAGGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR TCA 90 bp | TTGGTTTCCACTGACCCAGTGCCTACAGTGAGCCCCCTGGGTAAGTaGCTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTG | + |
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Preference number: 1 (lower is better) Translates to: LVSTDPVPTVSPLGK*LHRKGASIRLQQTL Trigger: CAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGTCACTTACCCAGGGGGCTCACTGTAGGCACTGGGTCAGTGGAAACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | AGTGACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTaGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SDSTERGRASGYNRL*KDGKSTGDPIPGVW Trigger: CCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | AAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCTaGGAGGACACATCATTCTCCAAGATGGGCCGTGGGGTCCCACGG | + |
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Preference number: 1 (lower is better) Translates to: KFSRKLRHHMASALF*EDTSFSKMGRGVPR Trigger: CCGTGGGACCCCACGGCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR TCA 90 bp | TCTCTGCTCCAGGTGAGTGCTCGGCCACCTGCTGTGCACGTGCAGTaGTGCAGGGTAAAGATGTGTTTCTCACCTCTGCTGCAAATTCTA | + |
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Preference number: 1 (lower is better) Translates to: SLLQVSARPPAVHVQ*CRVKMCFSPLLQIL Trigger: TAGAATTTGCAGCAGAGGTGAGAAACACATCTTTACCCTGCATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | TCCAGTGGGGAGACCCAGCAGGGACCCTGTACTCCCCATGAGGTATaGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATGCAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: SSGETQQGPCTPHEV*KVRVSSVSHPNADK Trigger: TTTGTCTGCATTTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGGTCCCTGCTGGGTCTCCCCACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | TTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATaGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGG | + |
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Preference number: 1 (lower is better) Translates to: LETLSQSSQESYGTT*LQLFSGRTHHSPRW Trigger: CCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR CCA 90 bp | TCTGAACCTCTGCTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTaGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SEPLLGTCRVSLVQC*FFSAIRDLKSKFSR Trigger: TCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAGTGTGGGGTTGTCCTTaGCACTGTGTCCAGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RTGSGWPHHSLLQVSARPVWGCP*HCVQWG Trigger: TCCCCACTGGACACAGTGCCAAGGACAACCCCACAC...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAATACCCGGTGTGTaGGGTTGTCCTTGGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: ARTGSGWPHHSLLQVSARPIPGV*GCPWHC Trigger: ACAGTGCCAAGGACAACCCCACACACCGGGTATTGG...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR TCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCCCCCTGGGTAAGTaGCTCCACAGAAAGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: CTGEQDRECFPSPAFIITSPLGK*LHRKGA Trigger: CGCCCCCTTTCTGTGGAGTCACTTACCCAGGGGGCT...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCAGACTTTGGAAAGATaGGAAGAGCACAGGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: ARTGSGWPHHSLLQVSARQTLER*EEHRGP Trigger: GGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTG...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGGCTATGTGCAAGTGTTaGCAGGAAGGGAGTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ARTGSGWPHHSLLQVSARAMCKC*QEGSSG Trigger: CCCTGAACTCCCTTCCTGCCAACACTTGCACATAGC...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCACAGGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTGAGCCCCCTGGGTAAGTaGCTCCACAGAAAGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: CHRRTGPDLVSTDPVPTVSPLGK*LHRKGA Trigger: CGCCCCCTTTCTGTGGAGTCACTTACCCAGGGGGCT...CACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR TCA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGGGAGTTCAGGGTTCTaGGGGCCAGCTGAAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: ARASRTENAFPAQPSSSPGSSGF*GPAEDA Trigger: TGCATCTTCAGCTGGCCCTCAGAACCCTGAACTCCC...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAACACACAAAGCTATGTaGAAGTGTTGGCAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RTGSGWPHHSLLQVSARPTHKAM*KCWQEG Trigger: CCCTTCCTGCCAACACTTGCACATAGCTTTGTGTGT...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAGTTTCTCACCTCTGCTaGAAATTCTACCAGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: RTGSGWPHHSLLQVSARPVSHLC*KFYQTG Trigger: CCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCTGCACGCACAGGCAGTaGCTGGCCTCACCACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: MCTGEQDRECFPSPAFIICTHRQ*LASPLS Trigger: AGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCA...GATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGCTTCAGCTCTTTTCTaGGAGGACACATCATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PTLHCTHRQWLASPLSAPASALF*EDTSFS Trigger: GGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGC...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTAGCTACGGCACCACATaGCTTCAGCTCTTTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPTLHCTHRQWLASPLSASYGTT*LQLFSG Trigger: CCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCT...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGGCTATGTGCAAGTGTTaGCAGGAAGGGAGTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TAVPLPELQHSCCPCCPEAMCKC*QEGSSG Trigger: CCCTGAACTCCCTTCCTGCCAACACTTGCACATAGC...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAAACTCTCTGCTCCAGGTaGGTGCTCGGCCACCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKTLCSR*VLGHLL Trigger: CAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGT...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCATGTTTCCCACCCAAATaGAGACAAAAATCTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: RTGSGWPHHSLLQVSARPCFPPK*RQKSEP Trigger: AGGTTCAGATTTTTGTCTGCATTTGGGTGGGAAACA...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTAGCTACGGCACCACATaGCTTCAGCTCTTTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLSYGTT*LQLFSG Trigger: CCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCT...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGCAGACAGGGAAAGGTTaGCACAGTCCTTTCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: TAVPLPELQHSCCPCCPEQTGKG*HSPFLT Trigger: TGTGAGGAAAGGACTGTGCCAACCTTTCCCTGTCTG...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAACACACAAAGCTATGTaGAAGTGTTGGCAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: ARASRTENAFPAQPSSSPTHKAM*KCWQEG Trigger: CCCTTCCTGCCAACACTTGCACATAGCTTTGTGTGT...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGGTTTCTCACCTCTGCTaGAAATTCTACCAGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: NATNSLGAKQQVGFGQGRVSHLC*KFYQTG Trigger: CCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATACCCTGTACTCCCCATaGGGTATGGAAGGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GFSSETRHTTSPENSSTHTLYSP*GMEGQS Trigger: ACTCTGACCTTCCATACCTCATGGGGAGTACAGGGT...ATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCATGTTTCCCACCCAAATaGAGACAAAAATCTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: PTLHCTHRQWLASPLSAPCFPPK*RQKSEP Trigger: AGGTTCAGATTTTTGTCTGCATTTGGGTGGGAAACA...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGACTCCCCATGAGGTATaGAAGGTCAGAGTTAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TAVPLPELQHSCCPCCPETPHEV*KVRVSS Trigger: ACTACTAACTCTGACCTTCCATACCTCATGGGGAGT...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGGGCTACAACAGACTTTaGAAAGATGGGAAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: TAVPLPELQHSCCPCCPEGYNRL*KDGKST Trigger: TGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCC...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGTGTGTTTCTCACCTCTaGTGCAAATTCTACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: TAVPLPELQHSCCPCCPECVSHL*CKFYQT Trigger: TGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACA...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCGCTTCAGCTCTTTTCTaGGAGGACACATCATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GEHQATTDFGKMGRAQGTASALF*EDTSFS Trigger: GGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGC...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACTCCCCATGAGGTATaGAAGGTCAGAGTTAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: MCTGEQDRECFPSPAFIITPHEV*KVRVSS Trigger: ACTACTAACTCTGACCTTCCATACCTCATGGGGAGT...GATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAAGGATTTGGTTTCCACTaGCCCAGTGCCTACAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKGFGFH*PSAYSE Trigger: CTCACTGTAGGCACTGGGTCAGTGGAAACCAAATCC...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR GCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGTGTTTCCCACCCAAATaGAGACAAAAATCTGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: NATNSLGAKQQVGFGQGRCFPPK*RQKSEP Trigger: AGGTTCAGATTTTTGTCTGCATTTGGGTGGGAAACA...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR GCA 90 bp | GCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCTCCTTGTGTTTCTCACCTCTaGTGCAAATTCTACCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: ASRTENAFPAQPSSSPAPCVSHL*CKFYQT Trigger: TGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACA...AGGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTAGTTTGGTTCAGTGTTaGTTCTTCTCAGCCATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLSLVQC*FFSAIR Trigger: TCTAATGGCTGAGAAGAACCAACACTGAACCAAACT...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAATGCAGACAAAAATCTaGACCTCTGCTAGGGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: PCTPHEVWKVRVSSVSHPMQTKI*TSARDL Trigger: CAAGTCCCTAGCAGAGGTTCAGATTTTTGTCTGCAT...TGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCAGCTACGGCACCACATaGCTTCAGCTCTTTTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: KDVFLTSAANSTRQGKVGSYGTT*LQLFSG Trigger: CCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCT...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAAATGCAGACAAAAATCTaGACCTCTGCTAGGGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKMQTKI*TSARDL Trigger: CAAGTCCCTAGCAGAGGTTCAGATTTTTGTCTGCAT...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATGCAGACAAAAGTTTGGTTCAGTGTTaGTTCTTCTCAGCCATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HEVWKVRVSSVSHPNADKSLVQC*FFSAIR Trigger: TCTAATGGCTGAGAAGAACCAACACTGAACCAAACT...TTTGTCTGCATTTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR TCA 72 bp | CAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTaGGTGCTCGGCCACCTGCTGTGCACGTGCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QAVAGLTTLCSR*VLGHLLCTCSD Trigger: ATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR GCA 72 bp | CAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTaGTCGGCCACCTGCTGTGCACGTGCAGTGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QWLASPLSAPGE*SATCCARAVMQ Trigger: CTGCATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | GATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTaGGGTTGTCCTTGGCACTGTGTCCAGTGGGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DGKSTGDPIPGV*GCPWHCVQWGD Trigger: GTCTCCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | TCTTACCAACACTGCACTGCACGCACAGGCAGTGGCTaGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SYQHCTARTGSG*PHHSLLQVSAR Trigger: CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR TCA 72 bp | GCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTaGGCCCCCTGGGTAAGTGACTCCACAGAAAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARIWFPLTQCLQ*APWVSDSTERG Trigger: CCCCCTTTCTGTGGAGTCACTTACCCAGGGGGCTCACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR GCA 72 bp | GCTCAGACCATGTGCACGGGCGAGCAGGACAGAGAATaGTTTCCCAGCCCAGCCTTCATCATCACCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AQTMCTGEQDRE*FPSPAFIITSS Trigger: GGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACATGGTCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR GCA 72 bp | AAGCAACAGGTGGGTTTCGGGCAGGGCAGGCAGAACTaGTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KQQVGFGQGRQN*CPSSRAPALML Trigger: CAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGTTCTGCCTGCCCTGCCCGAAACCCACCTGTTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | CTTCTCTTACCAACACTGCACTGCACGCACAGGCAGTaGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLPTLHCTHRQ*LASPLSAPGEC Trigger: GCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAAGAGAAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGAGGCTACAACAGACTTaGGAAAGATGGGAAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ARTGSGWPHHSLLQVSARRLQQT*ERWEEH Trigger: GTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCT...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAAGGACAGGCCCGGATTaGGTTTCCACTGACCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARASRTENAFPAQPSSSPRTGPD*VSTDPV Trigger: CACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCT...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCACCCGGTGTGTGGGGTaGTCCTTGGCACTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GEHQATTDFGKMGRAQGTTRCVG*SLALCP Trigger: TGGACACAGTGCCAAGGACAACCCCACACACCGGGT...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGCCAGACAGGGAAAGGTaGGCACAGTCCTTTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NATNSLGAKQQVGFGQGRPDRER*AQSFPH Trigger: GTGAGGAAAGGACTGTGCCAACCTTTCCCTGTCTGG...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR TCA 72 bp | ACTGACCCAGTGCCTACAGTGAGCCCCCTGGGTAAGTaGCTCCACAGAAAGGGGGCGAGCATCAGGCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: TDPVPTVSPLGK*LHRKGASIRLQ Trigger: TTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGTCACTTACCCAGGGGGCTCACTGTAGGCACTGGGTCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR GCA 72 bp | TCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCACCTaGTGTGCACGTGCAGTGATGCAGGGTAAAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPLSAPGECSAT*CARAVMQGKDV Trigger: CACATCTTTACCCTGCATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACAACCCGGTGTGTGGGGTaGTCCTTGGCACTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTTRCVG*SLALCP Trigger: TGGACACAGTGCCAAGGACAACCCCACACACCGGGT...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR TCA 72 bp | CAGGTGAGTGCTCGGCCACCTGCTGTGCACGTGCAGTaGTGCAGGGTAAAGATGTGTTTCTCACCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVSARPPAVHVQ*CRVKMCFSPLL Trigger: CAGCAGAGGTGAGAAACACATCTTTACCCTGCATCACTGCACGTGCACAGCAGGTGGCCGAGCACTCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | GGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATaGGAAGAGCACAGGGGACCCAATACCCGGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GASIRLQQTLER*EEHRGPNTRCV Trigger: CACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGACCTCTGCTAGGGACTaGCAGAGTCAGTTTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAVPLPELQHSCCPCCPETSARD*QSQFGS Trigger: TGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGT...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAGGACAGGCCCGGATTaGGTTTCCACTGACCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PAEDAGFSSETRHTTSPERTGPD*VSTDPV Trigger: CACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCT...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR TCA 72 bp | ATGTGCAAGTGTTGGCAGGAAGGGAGTTCAGGGTTCTaGGGGCCAGCTGAAGATGCAGGTTTCAGCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MCKCWQEGSSGF*GPAEDAGFSSE Trigger: CTCACTGCTGAAACCTGCATCTTCAGCTGGCCCTCAGAACCCTGAACTCCCTTCCTGCCAACACTTGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | AGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCTaGGAGGACACATCATTCTCCAAGATGGGCCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RKLRHHMASALF*EDTSFSKMGRG Trigger: CCCACGGCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | ACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTaGAAAGATGGGAAGAGCACAGGGGACCCAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: TERGRASGYNRL*KDGKSTGDPIP Trigger: GGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAAAGGACAGGCCCGGATTaGGTTTCCACTGACCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKRTGPD*VSTDPV Trigger: CACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCT...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAACCTCTGCTAGGGACTaGCAGAGTCAGTTTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TPQKGGEHQATTDFGKMGTSARD*QSQFGS Trigger: TGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGT...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAAAGCTATGTGCAAGTGTaGGCAGGAAGGGAGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKSYVQV*AGREFR Trigger: CCTGAACTCCCTTCCTGCCAACACTTGCACATAGCT...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTAGCTATGTGCAAGTGTaGGCAGGAAGGGAGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPSYVQV*AGREFR Trigger: CCTGAACTCCCTTCCTGCCAACACTTGCACATAGCT...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | CACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTaGCACAGTCCTTTCCTCACACACACACAAAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: HLCCKFYQTGKG*HSPFLTHTQSY Trigger: ATAGCTTTGTGTGTGTGTGAGGAAAGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | CTGCTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTaGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLGTCRVSLVQC*FFSAIRDLKSK Trigger: CTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR TCA 72 bp | TTAGTAGTGTTTCCCACCCAAATGCAGACAAAAATCTaGACCTCTGCTAGGGACTTGCAGAGTCAGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LVVFPTQMQTKI*TSARDLQSQFG Trigger: ACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTCAGATTTTTGTCTGCATTTGGGTGGGAAACACTACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CCA 72 bp | TTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATaGCTTCAGCTCTTTTCTGGGAGGACACATCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQSSQESYGTT*LQLFSGRTHHS Trigger: AGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR GCA 72 bp | AAATGCAGACAAAAATCTGAACCTCTGCTAGGGACTTaGAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KCRQKSEPLLGT*RVSLVQCWFFS Trigger: TGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTCAGATTTTTGTCTGCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCATCGAACGCCTGCCTCTaGAGTCGGTCCCGGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGSGWPHHSLLQVSARPSNACL*SRSRRL Trigger: GAGGCGCCGGGACCGACTGCAGAGGCAGGCGTTCGA...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCATTCTGCAGCCGTGCTTaGCGCCTCCTGGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGSGWPHHSLLQVSARPFCSRA*RLLESF Trigger: GAAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAA...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGGGAGATCCCAGAGTTTaGGGGTCCGGTCGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARGDPRV*GSGRDF Trigger: GAAGTCACGACCGGACCCTCAAACTCTGGGATCTCC...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TGTCACAGGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTGCCAGCGGGGAAAGTCTaGGGCGCGCAGGCCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: CHRRTGPDLVSTDPVPTVPAGKV*GAQARR Trigger: TCGTCGGGCCTGCGCGCCGCAGACTTTCCCCGCTGG...CACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTTCGAACGCCTGCCTCTaGAGTCGGTCCCGGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLHCTHRQWLASPLSASNACL*SRSRRL Trigger: GAGGCGCCGGGACCGACTGCAGAGGCAGGCGTTCGA...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAATCTCCTCGAACGCCTaGCTCTGCAGTCGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLHCTHRQWLASPLSAPISSNA*LCSRSR Trigger: CCGGGACCGACTGCAGAGGCAGGCGTTCGAGGAGAT...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGGCACTGTGTCCAGTGGGGATCTCCTCGAACGCCTaGCTCTGCAGTCGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPNTRCVGLSLALCPVGISSNA*LCSRSR Trigger: CCGGGACCGACTGCAGAGGCAGGCGTTCGAGGAGAT...CCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGGAGCCTGGACTGAACTaGACTGCGTTGACCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSAREPGLN*TALTSP Trigger: CGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTC...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCCAAAGTTTCACCCTaGGGTCCATGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARPKVSP*GPCLQW Trigger: CCACTGGAGGCATGGACCGCAGGGTGAAACTTTGGG...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCAGGATGAGTGTCCATaGTATCCTGGGGGACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARQDECP*YPGGLG Trigger: TCCCAGTCCCCCAGGATATCATGGACACTCATCCTG...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATCCTTCCAGCGGGGAAAGTCTaGGGCGCGCAGGCCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPDIPPALKTAPPILPAGKV*GAQARR Trigger: TCGTCGGGCCTGCGCGCCGCAGACTTTCCCCGCTGG...AAGGATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTCCTGCAGTTTGGTaGGCAGGTCCAGGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLHCTHRQWLASPLSAPGPAVW*AGPGSL Trigger: CAAACTGCCTGGACCTGCGCACCAAACTGCAGGACC...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGTTCCTTTGCTGCTTCTaGAAGCTCCTTCTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARFLCCF*KLLLQP Trigger: CGGCTGCAGAAGGAGCTTGCAGAAGCAGCAAAGGAA...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCATCACCCTGCGGTCCATaGCTCCAGTGGCCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ARASRTENAFPAQPSSSPSPCGP*LQWPAT Trigger: GGTTGCTGGCCACTGGAGGCATGGACCGCAGGGTGA...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCTCCTGGTCCATGCCTCCAGTaGCCAGCAACCGGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASRTENAFPAQPSSSPAPGPCLQ*PATGSL Trigger: CAGGCTCCCGGTTGCTGGCCACTGGAGGCATGGACC...AGGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGGCTCTTCCTGGTGTTTaGTCCTCAACTGGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARALPGV*SSTGPF Trigger: AAATGGCCCAGTTGAGGATCAAACACCAGGAAGAGC...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTTCACCCTGCGGTCCATaGCTCCAGTGGCCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLSPCGP*LQWPAT Trigger: GGTTGCTGGCCACTGGAGGCATGGACCGCAGGGTGA...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTAGTTCCTCCGCGATGTaGCGCTTCCAGCGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLSSSAM*RFQRGK Trigger: CTTTCCCCGCTGGAAGCGTCACATCGCGGAGGAACT...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAACCAGCGGGGAAAGTCTaGGGCGCGCAGGCCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKPAGKV*GAQARR Trigger: TCGTCGGGCCTGCGCGCCGCAGACTTTCCCCGCTGG...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGGGTCCTGCAGTTTGGTaGGCAGGTCCAGGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NATNSLGAKQQVGFGQGRGPAVW*AGPGSL Trigger: CAAACTGCCTGGACCTGCGCACCAAACTGCAGGACC...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGAGGCCTCCAGCAGGCTaGGAGAGTCGCTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NATNSLGAKQQVGFGQGRRPPAG*ESRLVA Trigger: AGCTACTAAGCGACTCTCGCAGCCTGCTGGAGGCCT...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027512.13 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGGCACTGTGTCCAGTGGGGTGGACTGAACTGCACTaGGTTGACCTCTCCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RGPNTRCVGLSLALCPVGWTELH*VDLSVM Trigger: CATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCA...CCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCCCTTCAGGGTCTGGTTaGCTACCTCGAGGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITPSGSG*LPRGPA Trigger: TGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGG...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGCCTTCAGGGTCTGGTTaGCTACCTCGAGGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAVPLPELQHSCCPCCPEPSGSG*LPRGPA Trigger: TGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGG...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGTGCTTGACGCCTCCTaGAGTCCTTCTCATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLHCTHRQWLASPLSAPVLDAS*SPSHSL Trigger: CAGAGAATGAGAAGGACTCCAGGAGGCGTCAAGCAC...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGCAGGATGAGTGTCCATaGTATCCTGGGGGACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAVPLPELQHSCCPCCPEQDECP*YPGGLG Trigger: TCCCAGTCCCCCAGGATATCATGGACACTCATCCTG...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR TCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCTTGAGGGTCCGGTCGTaGCTTCCTGAGACAATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITLRVRS*LPETIR Trigger: ACGGATTGTCTCAGGAAGTCACGACCGGACCCTCAA...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGATCTCCTTGTCCTTCTaGTGCATTTGGTTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARISLSF*CIWLFR Trigger: CCTGAACAACCAAATGCAGCAGAAGGACAAGGAGAT...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCGAGCCTGGACTGAACTaGACTGCGTTGACCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MCTGEQDRECFPSPAFIIEPGLN*TALTSP Trigger: CGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTC...GATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | GGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATTCACCCTGCGGTCCATaGCTCCAGTGGCCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSETRHTTSPENSSTHSPCGP*LQWPAT Trigger: GGTTGCTGGCCACTGGAGGCATGGACCGCAGGGTGA...ATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | GCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCTCCTCCCAAAGTTTCACCCTaGGGTCCATGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASRTENAFPAQPSSSPAPPKVSP*GPCLQW Trigger: CCACTGGAGGCATGGACCGCAGGGTGAAACTTTGGG...AGGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAGAATGTCTGTTTGACTaGATTTGTCCGGAGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTGSGWPHHSLLQVSARPECLFD*ICPEVD Trigger: ATCGACCTCCGGACAAATGCAGTCAAACAGACATTC...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR TCA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCATGGTATACTGCAGAATaGTCTCCTCGAACGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARASRTENAFPAQPSSSPWYTAE*SPRTPA Trigger: GGCAGGCGTTCGAGGAGATCATTCTGCAGTATACCA...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAAGGTCTCATCCACAATaGCTTCAATGTCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTGSGWPHHSLLQVSARPRSHPQ*LQCHHP Trigger: AGGATGATGACATTGAAGTCATTGTGGATGAGACCT...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGAGCAACTTGGTATACTaGAGAATGATCTCCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARSNLVY*RMISSN Trigger: GTTCGAGGAGATCATTCTGCAGTATACCAAGTTGCT...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCGGTCCTGCAGTTTGGTaGGCAGGTCCAGGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEHQATTDFGKMGRAQGTGPAVW*AGPGSL Trigger: CAAACTGCCTGGACCTGCGCACCAAACTGCAGGACC...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR GCA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGTGCAAACAATGTCATTaGAGCTGGATCCTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ARTGSGWPHHSLLQVSARCKQCH*SWILQT Trigger: TGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCA...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGGCGATTGGCTTCTTaGGCCTTCTCAGCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITRRLAS*AFSAIH Trigger: ATGGATGGCTGAGAAGGCCCAAGAAGCCAATCGCCT...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCAGGACTTTCCCGCTGTaGCCTGTGAGTGTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GEHQATTDFGKMGRAQGTRTFPL*PVSVCR Trigger: ACGGCACACACTCACAGGCCACAGCGGGAAAGTCCT...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGGCACTGTGTCCAGTGGGGAGACAGAGCGTCTCCTaGCAGCATCAGAAGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPNTRCVGLSLALCPVGRQSVS*QHQKND Trigger: ATCATTCTTCTGATGCTGCCAGGAGACGCTCTGTCT...CCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCTCTCATTCTCTGCATTaGGGCGATTGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITSHSLH*GDWLLG Trigger: CCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGA...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CTACGGCACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGTTCTGCAGCCGTGCTTaGCGCCTCCTGGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRHHMASALFWEDTSFSKFCSRA*RLLESF Trigger: GAAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAA...CTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGCTCTTCTGTGTGGTCTaGGGTCTCATCCACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NATNSLGAKQQVGFGQGRLFCVV*GLIHND Trigger: GTCATTGTGGATGAGACCTCAGACCACACAGAAGAG...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCCTCTTCTGTGTGGTCTaGGGTCTCATCCACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITLFCVV*GLIHND Trigger: GTCATTGTGGATGAGACCTCAGACCACACAGAAGAG...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATGGAGATCCCAGAGTTTaGGGGTCCGGTCGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSETRHTTSPENSSTHGDPRV*GSGRDF Trigger: GAAGTCACGACCGGACCCTCAAACTCTGGGATCTCC...ATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAATCTCCTTGTCCTTCTaGTGCATTTGGTTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLHCTHRQWLASPLSAPISLSF*CIWLFR Trigger: CCTGAACAACCAAATGCAGCAGAAGGACAAGGAGAT...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGTCGGTCAGCTCTTCCTaGTGTTTGATCCTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NATNSLGAKQQVGFGQGRSVSSS*CLILNW Trigger: CCAGTTGAGGATCAAACACCAGGAAGAGCTGACCGA...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCGTGCTTGACGCCTCCTaGAGTCCTTCTCATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCTGEQDRECFPSPAFIIVLDAS*SPSHSL Trigger: CAGAGAATGAGAAGGACTCCAGGAGGCGTCAAGCAC...GATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCGTGTCCATGATATCCTaGGGGACTGGGATGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MCTGEQDRECFPSPAFIIVSMIS*GTGMEE Trigger: CTCTTCCATCCCAGTCCCCCAGGATATCATGGACAC...GATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CAA 72 bp | CATACCACCAGCCCTGAAAACAGCTCCACCCATCCTTaGTCACAGGAGGACAGGCCCGGATTTGGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTTSPENSSTHP*SQEDRPGFGFH Trigger: GTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACAAAGGATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTAGTTCCTCCGCGATGTaGCGCTTCCAGCGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPSSSAM*RFQRGK Trigger: CTTTCCCCGCTGGAAGCGTCACATCGCGGAGGAACT...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGCTCTTCCTGGTGTTTaGTCCTCAACTGGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLALPGV*SSTGPF Trigger: AAATGGCCCAGTTGAGGATCAAACACCAGGAAGAGC...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAATTCTGCAGCCGTGCTTaGCGCCTCCTGGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQFCSRA*RLLESF Trigger: GAAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAA...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACATTGAGGGTCCGGTCGTaGCTTCCTGAGACAATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTLRVRS*LPETIR Trigger: ACGGATTGTCTCAGGAAGTCACGACCGGACCCTCAA...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCACTATTTGGCATGTCATaGTTTTCTGCTTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGSGWPHHSLLQVSARPLFGMS*FSACSF Trigger: GAAACTACAAGCAGAAAAGCATGACATGCCAAATAG...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTGTCCTTCTCATTCTCTaGATTGAGGCGATTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLHCTHRQWLASPLSAVLLIL*IEAIGF Trigger: GAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGAC...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGTCCTTCTCATTCTCTaGATTGAGGCGATTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARASRTENAFPAQPSSSPVLLIL*IEAIGF Trigger: GAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGAC...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGGACTGAACTGCACTaGGTTGACCTCTCCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGWTELH*VDLSVM Trigger: CATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCA...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCCCCAAAGTTTCACCCTaGGGTCCATGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGPKVSP*GPCLQW Trigger: CCACTGGAGGCATGGACCGCAGGGTGAAACTTTGGG...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCCTGGTGACCAGTTCCTaGTTCTCCTCAGTAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITLVTSS*FSSVVF Trigger: GAAAACTACTGAGGAGAACCAGGAACTGGTCACCAG...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | TGTCACAGGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTGGAGGTCTCTTCTGTGTaGTCTGAGGTCTCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CHRRTGPDLVSTDPVPTVEVSSV*SEVSST Trigger: TGTGGATGAGACCTCAGACCACACAGAAGAGACCTC...CACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCCAGCAACCGGGAGCCTaGACTGAACTGCACTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGQQPGA*TELHCV Trigger: AACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTG...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGACAGCAACCGGGAGCCTaGACTGAACTGCACTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPQKGGEHQATTDFGKMGQQPGA*TELHCV Trigger: AACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTG...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CAA 72 bp | CACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTaGGAAAGATGGGAAGAGCACAGGGGACCCAATACC | + |
|
Preference number: 4 (lower is better) Translates to: HRKGASIRLQQT*ERWEEHRGPNT Trigger: GGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CAA 72 bp | AACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTaGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NCCPSSRAPALM*SLLSREQCGSK Trigger: TTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATTGGTATACTGCAGAATaGTCTCCTCGAACGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSETRHTTSPENSSTHWYTAE*SPRTPA Trigger: GGCAGGCGTTCGAGGAGATCATTCTGCAGTATACCA...ATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTCTCATTCTCTGCATTaGGGCGATTGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGSHSLH*GDWLLG Trigger: CCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGA...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCCCGGTCGTGACTTCCTaGGACAATCCGTGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGPVVTS*DNPCIV Trigger: GACAATGCACGGATTGTCTCAGGAAGTCACGACCGG...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCACCGGTCGTGACTTCCTaGGACAATCCGTGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTPHEVWKVRVSSVSHPPVVTS*DNPCIV Trigger: GACAATGCACGGATTGTCTCAGGAAGTCACGACCGG...TGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTAAGAGAACCCTCGGCTaGGCCTGCTGCCACGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPKRTLG*ACCHVT Trigger: AGTTACGTGGCAGCAGGCTCAGCCGAGGGTTCTCTT...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCCAGTGGGGAGACCCAGCAGGGACCCTGTACTCCCCATGAGGTATGGAAGCAACTTGGTATACTaGAGAATGATCTCCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCPVGRPSRDPVLPMRYGSNLVY*RMISSN Trigger: GTTCGAGGAGATCATTCTGCAGTATACCAAGTTGCT...TCCATACCTCATGGGGAGTACAGGGTCCCTGCTGGGTCTCCCCACTGGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCCAGTGGGGAGACCCAGCAGGGACCCTGTACTCCCCATGAGGTATGGACCAGGACTTATTTCATaGCTATTTGGCATGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCPVGRPSRDPVLPMRYGPGLIS*LFGMSC Trigger: GCATGACATGCCAAATAGGCATGAAATAAGTCCTGG...TCCATACCTCATGGGGAGTACAGGGTCCCTGCTGGGTCTCCCCACTGGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTTCCTTGTCCTTCTGCTaGATTTGGTTGTTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLHCTHRQWLASPLSASLSFC*IWLFRS Trigger: TGACCTGAACAACCAAATGCAGCAGAAGGACAAGGA...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGTCCTTCTCATTCTCTaGATTGAGGCGATTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLVLLIL*IEAIGF Trigger: GAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGAC...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAATTCCTTTGCTGCTTCTaGAAGCTCCTTCTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAEDAGFSSETRHTTSPEFLCCF*KLLLQP Trigger: CGGCTGCAGAAGGAGCTTGCAGAAGCAGCAAAGGAA...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTAGGCCTCCAGCAGGCTaGGAGAGTCGCTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPRPPAG*ESRLVA Trigger: AGCTACTAAGCGACTCTCGCAGCCTGCTGGAGGCCT...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027512.13 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGGAATGTCTGTTTGACTaGATTTGTCCGGAGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAVPLPELQHSCCPCCPEECLFD*ICPEVD Trigger: ATCGACCTCCGGACAAATGCAGTCAAACAGACATTC...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCTCGGTCAGCTCTTCCTaGTGTTTGATCCTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEHQATTDFGKMGRAQGTSVSSS*CLILNW Trigger: CCAGTTGAGGATCAAACACCAGGAAGAGCTGACCGA...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGATCATCCTTCAGGGTCTaGTTGGCTACCTCGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPQKGGEHQATTDFGKMGSSFRV*LATSRS Trigger: GGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGA...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAGTGCTTGACGCCTCCTaGAGTCCTTCTCATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAEDAGFSSETRHTTSPEVLDAS*SPSHSL Trigger: CAGAGAATGAGAAGGACTCCAGGAGGCGTCAAGCAC...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTGAGGTCTCTTCTGTGTaGTCTGAGGTCTCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGEVSSV*SEVSST Trigger: TGTGGATGAGACCTCAGACCACACAGAAGAGACCTC...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAACAGCAACCGGGAGCCTaGACTGAACTGCACTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQQQPGA*TELHCV Trigger: AACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTG...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCGGTCCATGCCTCCAGTaGCCAGCAACCGGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSKFSRKLRHHMASALFGPCLQ*PATGSL Trigger: CAGGCTCCCGGTTGCTGGCCACTGGAGGCATGGACC...GAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCGGTCCATGCCTCCAGTaGCCAGCAACCGGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPLETLSQSSQESYGGPCLQ*PATGSL Trigger: CAGGCTCCCGGTTGCTGGCCACTGGAGGCATGGACC...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGAAGTTCCTCCGCGATGTaGCGCTTCCAGCGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRSSSAM*RFQRGK Trigger: CTTTCCCCGCTGGAAGCGTCACATCGCGGAGGAACT...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATTCTCATTCTCTGCATTaGGGCGATTGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSETRHTTSPENSSTHSHSLH*GDWLLG Trigger: CCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGA...ATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | AACGCCACAAACTCTCTGGGAGCAAAGCAACAGGTGGGTTTCGGGCAGGGCAGGAGAGCTGTGCTGTTTTaGAAGAACCTTCTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NATNSLGAKQQVGFGQGRRAVLF*KNLLHF Trigger: AAAGTGGAGAAGGTTCTTTCAAAACAGCACAGCTCT...CCTGCCCTGCCCGAAACCCACCTGTTGCTTTGCTCCCAGAGAGTTTGTGGCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACATTCCTTTGTCCACACTaGCAACATGTAAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTFLCPH*QHVSPR Trigger: CCTCGGGCTTACATGTTGTCAGTGTGGACAAAGGAA...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTGCAGCATCAGAAGAATaGTGTCCCAAAAGGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGAASEE*CPKRGD Trigger: ATCTCCCCTTTTGGGACATCATTCTTCTGATGCTGC...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATGCAGACAAAATCTCCTCGAACGCCTaGCTCTGCAGTCGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HEVWKVRVSSVSHPNADKISSNA*LCSRSR Trigger: CCGGGACCGACTGCAGAGGCAGGCGTTCGAGGAGAT...TTTGTCTGCATTTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGGCACTGTGTCCAGTGGGGCTATTTGGCATGTCATaGTTTTCTGCTTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGPNTRCVGLSLALCPVGLFGMS*FSACSF Trigger: GAAACTACAAGCAGAAAAGCATGACATGCCAAATAG...CCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCTTTTTATGCAGACTTTaGTGCGGAGATCCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITFLCRL*CGDPRV Trigger: AACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAA...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCCAGTGGGGAGACCCAGCAGGGACCCTGTACTCCCCATGAGGTATGGACAAACACTGTTTTTATaGAGACTTTGCTGCGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPVGRPSRDPVLPMRYGQTLFL*RLCCGD Trigger: ATCTCCGCAGCAAAGTCTGCATAAAAACAGTGTTTG...TCCATACCTCATGGGGAGTACAGGGTCCCTGCTGGGTCTCCCCACTGGACACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCTGCAAACAATGTCATTaGAGCTGGATCCTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITCKQCH*SWILQT Trigger: TGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCA...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCATATTTCATGCCTATTTaGCATGTCATGCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLHCTHRQWLASPLSAPYFMPI*HVMLFC Trigger: GCAGAAAAGCATGACATGCCAAATAGGCATGAAATA...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAGTGTCCATGATATCCTaGGGGACTGGGATGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPQKGGEHQATTDFGKMGVSMIS*GTGMEE Trigger: CTCTTCCATCCCAGTCCCCCAGGATATCATGGACAC...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCCAATGTCATTGCAGCTaGATCCTGCAAACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGEQDRECFPSPAFIITQCHCS*ILQTLF Trigger: AAACAGTGTTTGCAGGATCCAGCTGCAATGACATTG...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCTCCTTGGGTCAATACTGAATaGAGATCTGACTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRTENAFPAQPSSSPAPWVNTE*RSDFSS Trigger: GCTGGAAAAGTCAGATCTTCATTCAGTATTGACCCA...AGGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAGCTCTTCCTGGTGTTTaGTCCTCAACTGGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PCTPHEVWKVRVSSVSHPALPGV*SSTGPF Trigger: AAATGGCCCAGTTGAGGATCAAACACCAGGAAGAGC...TGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCCTCTTCTGTGTGGTCTaGGGTCTCATCCACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGLFCVV*GLIHND Trigger: GTCATTGTGGATGAGACCTCAGACCACACAGAAGAG...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GAACCTCTGCTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCACCGGTCGTGACTTCCTaGGACAATCCGTGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPLLGTCRVSLVQCWFFSPVVTS*DNPCIV Trigger: GACAATGCACGGATTGTCTCAGGAAGTCACGACCGG...TGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCAAGAGAACCCTCGGCTaGGCCTGCTGCCACGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: KDVFLTSAANSTRQGKVGKRTLG*ACCHVT Trigger: AGTTACGTGGCAGCAGGCTCAGCCGAGGGTTCTCTT...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCATTCCTTTGTCCACACTaGCAACATGTAAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCTPHEVWKVRVSSVSHPFLCPH*QHVSPR Trigger: CCTCGGGCTTACATGTTGTCAGTGTGGACAAAGGAA...TGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTAGCAACTTGGTATACTaGAGAATGATCTCCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLSNLVY*RMISSN Trigger: GTTCGAGGAGATCATTCTGCAGTATACCAAGTTGCT...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCGAGCCTGGACTGAACTaGACTGCGTTGACCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KDVFLTSAANSTRQGKVGEPGLN*TALTSP Trigger: CGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTC...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TGTCACAGGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTGTTTTTATGCAGACTTTaGTGCGGAGATCCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CHRRTGPDLVSTDPVPTVFLCRL*CGDPRV Trigger: AACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAA...CACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTGAATGTCTGTTTGACTaGATTTGTCCGGAGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGECLFD*ICPEVD Trigger: ATCGACCTCCGGACAAATGCAGTCAAACAGACATTC...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTTCTCCAGGTCAGAGATaGTCTGTAAATACTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLSPGQR*SVNTPK Trigger: TTTCGGAGTATTTACAGACCATCTCTGACCTGGAGA...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GAACCTCTGCTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCATCATCCTTCAGGGTCTaGTTGGCTACCTCGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPLLGTCRVSLVQCWFFSSSFRV*LATSRS Trigger: GGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGA...TGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAAGTGTCCATGATATCCTaGGGGACTGGGATGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKVSMIS*GTGMEE Trigger: CTCTTCCATCCCAGTCCCCCAGGATATCATGGACAC...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CCA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCAGGACTTTCCCGCTGTaGCCTGTGAGTGTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KDVFLTSAANSTRQGKVGRTFPL*PVSVCR Trigger: ACGGCACACACTCACAGGCCACAGCGGGAAAGTCCT...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR TCA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCTGGGTCAATACTGAATaGAGATCTGACTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEHQATTDFGKMGRAQGTWVNTE*RSDFSS Trigger: GCTGGAAAAGTCAGATCTTCATTCAGTATTGACCCA...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGACAGGATGAGTGTCCATaGTATCCTGGGGGACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRQDECP*YPGGLG Trigger: TCCCAGTCCCCCAGGATATCATGGACACTCATCCTG...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR TCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCCAGACAGGGAGCCCTTaGATTCACATTTATCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGQTGSP*IHIYLR Trigger: TCGGAGATAAATGTGAATTCAAGGGCTCCCTGTCTG...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGACAGACAGGGAGCCCTTaGATTCACATTTATCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPQKGGEHQATTDFGKMGQTGSP*IHIYLR Trigger: TCGGAGATAAATGTGAATTCAAGGGCTCCCTGTCTG...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR TCA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGATTGAGGGTCCGGTCGTaGCTTCCTGAGACAATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRLRVRS*LPETIR Trigger: ACGGATTGTCTCAGGAAGTCACGACCGGACCCTCAA...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCGGAGATCCCAGAGTTTaGGGGTCCGGTCGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPLETLSQSSQESYGGDPRV*GSGRDF Trigger: GAAGTCACGACCGGACCCTCAAACTCTGGGATCTCC...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCAAGAGAACCCTCGGCTaGGCCTGCTGCCACGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPLETLSQSSQESYGKRTLG*ACCHVT Trigger: AGTTACGTGGCAGCAGGCTCAGCCGAGGGTTCTCTT...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATCCTTGCAGTAAAAGTAATCTaGAGGGCGTCATACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPDIPPALKTAPPILAVKVI*RASYSS Trigger: GGATGAGTATGACGCCCTGCAGATTACTTTTACTGC...AAGGATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAGCAGTAAAAGTAATCTaGAGGGCGTCATACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PAEDAGFSSETRHTTSPEAVKVI*RASYSS Trigger: GGATGAGTATGACGCCCTGCAGATTACTTTTACTGC...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GAACCTCTGCTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCATGGACTGAACTGCACTaGGTTGACCTCTCCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: EPLLGTCRVSLVQCWFFSWTELH*VDLSVM Trigger: CATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCA...TGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTCAAACACTGTTTTTATaGAGACTTTGCTGCGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKMGRAQGTQYPVCGVVLQTLFL*RLCCGD Trigger: ATCTCCGCAGCAAAGTCTGCATAAAAACAGTGTTTG...AAGGACAACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CTACGGCACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGCTGGTGACCAGTTCCTaGTTCTCCTCAGTAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRHHMASALFWEDTSFSKLVTSS*FSSVVF Trigger: GAAAACTACTGAGGAGAACCAGGAACTGGTCACCAG...CTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCAGGACTTTCCCGCTGTaGCCTGTGAGTGTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPLETLSQSSQESYGRTFPL*PVSVCR Trigger: ACGGCACACACTCACAGGCCACAGCGGGAAAGTCCT...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAATGGGTCAATACTGAATaGAGATCTGACTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAEDAGFSSETRHTTSPEWVNTE*RSDFSS Trigger: GCTGGAAAAGTCAGATCTTCATTCAGTATTGACCCA...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATCCTTCCAGGACTTATTTCATaGCTATTTGGCATGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPDIPPALKTAPPILPGLIS*LFGMSC Trigger: GCATGACATGCCAAATAGGCATGAAATAAGTCCTGG...AAGGATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCTCCTTGTCCTTCTGCTaGATTTGGTTGTTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGSLSFC*IWLFRS Trigger: TGACCTGAACAACCAAATGCAGCAGAAGGACAAGGA...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACATGCAAACAATGTCATTaGAGCTGGATCCTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTCKQCH*SWILQT Trigger: TGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCA...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACATCTCCAGGTCAGAGATaGTCTGTAAATACTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTSPGQR*SVNTPK Trigger: TTTCGGAGTATTTACAGACCATCTCTGACCTGGAGA...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCAGGTCTCATCCACAATaGCTTCAATGTCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGRSHPQ*LQCHHP Trigger: AGGATGATGACATTGAAGTCATTGTGGATGAGACCT...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTCTATTTGGCATGTCATaGTTTTCTGCTTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGLFGMS*FSACSF Trigger: GAAACTACAAGCAGAAAAGCATGACATGCCAAATAG...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCACCAGGACTTATTTCATaGCTATTTGGCATGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PCTPHEVWKVRVSSVSHPPGLIS*LFGMSC Trigger: GCATGACATGCCAAATAGGCATGAAATAAGTCCTGG...TGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTTCCTTGTCCTTCTGCTaGATTTGGTTGTTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPSLSFC*IWLFRS Trigger: TGACCTGAACAACCAAATGCAGCAGAAGGACAAGGA...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATCTCCTTGTCCTTCTaGTGCATTTGGTTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQISLSF*CIWLFR Trigger: CCTGAACAACCAAATGCAGCAGAAGGACAAGGAGAT...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGATTTTTATGCAGACTTTaGTGCGGAGATCCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPQKGGEHQATTDFGKMGFLCRL*CGDPRV Trigger: AACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAA...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCAGGCGATTGGCTTCTTaGGCCTTCTCAGCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPLETLSQSSQESYGRRLAS*AFSAIH Trigger: ATGGATGGCTGAGAAGGCCCAAGAAGCCAATCGCCT...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTAGGTCTCATCCACAATaGCTTCAATGTCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPRSHPQ*LQCHHP Trigger: AGGATGATGACATTGAAGTCATTGTGGATGAGACCT...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGACAGACAGGGAGCCCTTaGATTCACATTTATCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRQTGSP*IHIYLR Trigger: TCGGAGATAAATGTGAATTCAAGGGCTCCCTGTCTG...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAAGAGCTGTGCTGTTTTaGAAGAACCTTCTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQRAVLF*KNLLHF Trigger: AAAGTGGAGAAGGTTCTTTCAAAACAGCACAGCTCT...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR TCA 90 bp | CATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATGCAGACAAATTCCTTTGTCCACACTaGCAACATGTAAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HEVWKVRVSSVSHPNADKFLCPH*QHVSPR Trigger: CCTCGGGCTTACATGTTGTCAGTGTGGACAAAGGAA...TTTGTCTGCATTTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | TGTTGGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACCTTCAGGGTCTGGTTaGCTACCTCGAGGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWFFSAIRDLKSKFSRKLPSGSG*LPRGPA Trigger: TGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGG...TAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAACAATGTCATTGCAGCTaGATCCTGCAAACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQQCHCS*ILQTLF Trigger: AAACAGTGTTTGCAGGATCCAGCTGCAATGACATTG...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAACAAACACTGTTTTTATaGAGACTTTGCTGCGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQQTLFL*RLCCGD Trigger: ATCTCCGCAGCAAAGTCTGCATAAAAACAGTGTTTG...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGATGGGCTTACACATTGTTCAGTaGAAACAATGTCATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHMASALFWEDTSFSKMGLHIVQ*KQCHCS Trigger: GCTGCAATGACATTGTTTGCACTGAACAATGTGTAA...GCCCATCTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCCTGGTGACCAGTTCCTaGTTCTCCTCAGTAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPLETLSQSSQESYGLVTSS*FSSVVF Trigger: GAAAACTACTGAGGAGAACCAGGAACTGGTCACCAG...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| 3UTR CAA 72 bp | AAATCTGAACCTCTGCTAGGGACTTGCAGAGTCAGTTaGGTTCAGTGTTGGTTCTTCTCAGCCATTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSEPLLGTCRVS*VQCWFFSAIRD Trigger: GTCTCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTCAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAATACTCCGAAATCTTTaGTTCATTCATCTGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTPHEVWKVRVSSVSHPILRNL*FIHLYL Trigger: GAGATACAGATGAATGAAGCAAAGATTTCGGAGTAT...TGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAATACTCCGAAATCTTTaGTTCATTCATCTGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPQKGGEHQATTDFGKMGILRNL*FIHLYL Trigger: GAGATACAGATGAATGAAGCAAAGATTTCGGAGTAT...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCGCAGTAAAAGTAATCTaGAGGGCGTCATACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LKSKFSRKLRHHMASALFAVKVI*RASYSS Trigger: GGATGAGTATGACGCCCTGCAGATTACTTTTACTGC...GAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAATATTTCATGCCTATTTaGCATGTCATGCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKYFMPI*HVMLFC Trigger: GCAGAAAAGCATGACATGCCAAATAGGCATGAAATA...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGACAATGTCATTGCAGCTaGATCCTGCAAACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRQCHCS*ILQTLF Trigger: AAACAGTGTTTGCAGGATCCAGCTGCAATGACATTG...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATACTCCGAAATCTTTaGTTCATTCATCTGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVLPMRYGRSELVVFPTQILRNL*FIHLYL Trigger: GAGATACAGATGAATGAAGCAAAGATTTCGGAGTAT...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | GAACCTCTGCTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCATTACACATTGTTCAGTaGAAACAATGTCATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPLLGTCRVSLVQCWFFSLHIVQ*KQCHCS Trigger: GCTGCAATGACATTGTTTGCACTGAACAATGTGTAA...TGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAGCAGAGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATGCAGACAAATCTCCAGGTCAGAGATaGTCTGTAAATACTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HEVWKVRVSSVSHPNADKSPGQR*SVNTPK Trigger: TTTCGGAGTATTTACAGACCATCTCTGACCTGGAGA...TTTGTCTGCATTTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCTATTTCATGCCTATTTaGCATGTCATGCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSKFSRKLRHHMASALFYFMPI*HVMLFC Trigger: GCAGAAAAGCATGACATGCCAAATAGGCATGAAATA...GAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTATTACACATTGTTCAGTaGAAACAATGTCATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CWFFSAIRDLKSKFSRKLLHIVQ*KQCHCS Trigger: GCTGCAATGACATTGTTTGCACTGAACAATGTGTAA...TAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACCAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS TCA 90 bp | GCCTGCCTCTGCAGTCGGTCCCGGCGCCTCAGTTCCTCCGCGATGTaGCGCTTCCAGCGGGGAAAGTCTGCGGCGCGCAGGCCCGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: ACLCSRSRRLSSSAM*RFQRGKSAARRPDD Trigger: GTCGTCGGGCCTGCGCGCCGCAGACTTTCCCCGCTGGAAGCGTCACATCGCGGAGGAACTGAGGCGCCGGGACCGACTGCAGAGGCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCAGCAGGTCCAGGCAGTTaGTCTCCAGGTCAGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RTGSGWPHHSLLQVSARPAGPGS*SPGQRW Trigger: CCATCTCTGACCTGGAGACAAACTGCCTGGACCTGC...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGCCACTGAACTGCACTGCGTaGACCTCTCCGTCATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTGSGWPHHSLLQVSARPLNCTA*TSPSCA Trigger: TGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAG...TGGCCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGGCCCACGCCACCGCATaGATAGAAGAGCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARTGSGWPHHSLLQVSARAHATA*IEELCC Trigger: ACAGCACAGCTCTTCTATCAATGCGGTGGCGTGGGC...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCACTTCTGCAGCCGTGCTaGACGCCTCCTGGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PTLHCTHRQWLASPLSAPLLQPC*TPPGVL Trigger: AAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAAG...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 90 bp | CGGTCCATGCCTCCAGTGGCCAGCAACCGGGAGCCTGGACTGAACTaGACTGCGTTGACCTCTCCGTCATGCGCATCGAAGACATACGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSMPPVASNREPGLN*TALTSPSCASKTYE Trigger: CTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACTGGAGGCATGGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS CCA 90 bp | TTTCACCCTGCGGTCCATGCCTCCAGTGGCCAGCAACCGGGAGCCTaGACTGAACTGCACTGCGTTGACCTCTCCGTCATGCGCATCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHPAVHASSGQQPGA*TELHCVDLSVMRIE Trigger: TTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACTGGAGGCATGGACCGCAGGGTGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 90 bp | CATGCCTCCAGTGGCCAGCAACCGGGAGCCTGGACTGAACTGCACTaGGTTGACCTCTCCGTCATGCGCATCGAAGACATACGAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HASSGQQPGAWTELH*VDLSVMRIEDIRGS Trigger: ACTGCCTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACTGGAGGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTTCCTTCAGGGTCTGGTaGGCTACCTCGAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPTLHCTHRQWLASPLSASFRVW*ATSRSC Trigger: GCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGA...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCACTTCTGCAGCCGTGCTaGACGCCTCCTGGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARASRTENAFPAQPSSSPLLQPC*TPPGVL Trigger: AAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAAG...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCGCCCACGCCACCGCATaGATAGAAGAGCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTGEQDRECFPSPAFIITAHATA*IEELCC Trigger: ACAGCACAGCTCTTCTATCAATGCGGTGGCGTGGGC...GGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCAGGTGAGTGCTCGGACAGCTCTGCTTCCTTaGTCCACACTGACAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: ARTGSGWPHHSLLQVSARTALLP*STLTTC Trigger: ACATGTTGTCAGTGTGGACAAAGGAAGCAGAGCTGT...CCGAGCACTCACCTGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTTCCTTCAGGGTCTGGTaGGCTACCTCGAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGSFRVW*ATSRSC Trigger: GCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGA...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTTTGTCCAGCAGGAACTaGGCAGAGAGGACTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPTLHCTHRQWLASPLSALSSRN*AERTFP Trigger: CGGGAAAGTCCTCTCTGCCAAGTTCCTGCTGGACAA...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS TCA 90 bp | CACTTTCCCTGTCAGCACACTCCAGACATAAAGAGAACCCTCGGCTaGGCCTGCTGCCACGTAACTGCCATCAGGGCTGAAGACAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: HFPCQHTPDIKRTLG*ACCHVTAIRAEDNP Trigger: CGGGTTGTCTTCAGCCCTGATGGCAGTTACGTGGCAGCAGGCTCAGCCGAGGGTTCTCTTTATGTCTGGAGTGTGCTGACAGGGAAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCGCAGGTCCAGGCAGTTaGTCTCCAGGTCAGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GEHQATTDFGKMGRAQGTAGPGS*SPGQRW Trigger: CCATCTCTGACCTGGAGACAAACTGCCTGGACCTGC...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCAGGTAGAGGTTCCTTaGCTGCTTCTGCAAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTLHCTHRQWLASPLSAQVEVP*LLLQAP Trigger: AGGAGCTTGCAGAAGCAGCAAAGGAACCTCTACCTG...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TGTCACAGGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTGTTGTCCAGCAGGAACTaGGCAGAGAGGACTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CHRRTGPDLVSTDPVPTVLSSRN*AERTFP Trigger: CGGGAAAGTCCTCTCTGCCAAGTTCCTGCTGGACAA...CACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGGAGACAATCCGTGCATaGTCCAGCAGGAACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAVPLPELQHSCCPCCPEETIRA*SSRNLA Trigger: TGCCAAGTTCCTGCTGGACAATGCACGGATTGTCTC...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | AGGGGACCCAATACCCGGTGTGTGGGGTTGTCCTTGGCACTGTGTCCAGTGGGGGTGCAAACAATGTCATaGCAGCTGGATCCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RGPNTRCVGLSLALCPVGVQTMS*QLDPAN Trigger: GTTTGCAGGATCCAGCTGCAATGACATTGTTTGCAC...CCCCACTGGACACAGTGCCAAGGACAACCCCACACACCGGGTATTGGGTCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 90 bp | AACCGGGAGCCTGGACTGAACTGCACTGCGTTGACCTCTCCGTCATaGGCATCGAAGACATACGAGGCAGTAGTTGGGACTCTCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: NREPGLNCTALTSPS*ASKTYEAVVGTLTS Trigger: AGATGTGAGAGTCCCAACTACTGCCTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS CCA 90 bp | GCAGTAAAAGTAATCTGCAGGGCGTCATACTCATCCTTCAGGGTCTaGTTGGCTACCTCGAGGTCCTGCAGTTTGGTGCGCAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVKVICRASYSSFRV*LATSRSCSLVRRSR Trigger: CCTGGACCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGAGTATGACGCCCTGCAGATTACTTTTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGATCCTTCAGGGTCTGGTaGGCTACCTCGAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPQKGGEHQATTDFGKMGSFRVW*ATSRSC Trigger: GCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGA...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCCAGTGGGGAGACCCAGCAGGGACCCTGTACTCCCCATGAGGTATGGATTCTCATTCTCTGCATaGAGGCGATTGGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCPVGRPSRDPVLPMRYGFSFSA*RRLASW Trigger: CCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAA...TCCATACCTCATGGGGAGTACAGGGTCCCTGCTGGGTCTCCCCACTGGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCACCAGACAGGGAGCCCTaGAATTCACATTTATCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARASRTENAFPAQPSSSPPDREP*NSHLSP Trigger: CGGAGATAAATGTGAATTCAAGGGCTCCCTGTCTGG...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCACAGTCCAGATTCGGCTaGCAAAATCATTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTLHCTHRQWLASPLSAPQSRFG*QNHLKL Trigger: CAGCTTCAAATGATTTTGCAAGCCGAATCTGGACTG...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TGTCACAGGAGGACAGGCCCGGATTTGGTTTCCACTGACCCAGTGCCTACAGTGGAGACAATCCGTGCATaGTCCAGCAGGAACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CHRRTGPDLVSTDPVPTVETIRA*SSRNLA Trigger: TGCCAAGTTCCTGCTGGACAATGCACGGATTGTCTC...CACTGTAGGCACTGGGTCAGTGGAAACCAAATCCGGGCCTGTCCTCCTGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCTCCTCAGTCAGAGCCGCATTaGAATCCAGGCGCACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASRTENAFPAQPSSSPAPQSEPH*NPGALN Trigger: ATTCAGTGCGCCTGGATTCAAATGCGGCTCTGACTG...AGGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATCCTTGCCCACGCCACCGCATaGATAGAAGAGCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAVRPDIPPALKTAPPILAHATA*IEELCC Trigger: ACAGCACAGCTCTTCTATCAATGCGGTGGCGTGGGC...AAGGATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 90 bp | CTCCCAAAGATATTAGTGATAGAATCCAGAAGGCCTCCAGCAGGCTaGGAGAGTCGCTTAGTAGCTGCTCTGCTGACAGCTCGGACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPKILVIESRRPPAG*ESRLVAALLTARTG Trigger: TCCCGTCCGAGCTGTCAGCAGAGCAGCTACTAAGCGACTCTCGCAGCCTGCTGGAGGCCTTCTGGATTCTATCACTAATATCTTTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027512.13 |
||
| CDS CCA 90 bp | CTCCTGGAGTCCTTCTCATTCTCTGCATTGAGGCGATTGGCTTCTTaGGCCTTCTCAGCCATCCATCTGGTGACCAGTTCCTGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLESFSFSALRRLAS*AFSAIHLVTSSWFS Trigger: GGAGAACCAGGAACTGGTCACCAGATGGATGGCTGAGAAGGCCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGACTCCAGGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGCACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGGCAGGTCCAGGCAGTTaGTCTCCAGGTCAGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: LRHHMASALFWEDTSFSKAGPGS*SPGQRW Trigger: CCATCTCTGACCTGGAGACAAACTGCCTGGACCTGC...CTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACATTGTCCAGCAGGAACTaGGCAGAGAGGACTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTLSSRN*AERTFP Trigger: CGGGAAAGTCCTCTCTGCCAAGTTCCTGCTGGACAA...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAACAGCTCTGCTTCCTTaGTCCACACTGACAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: ARASRTENAFPAQPSSSPTALLP*STLTTC Trigger: ACATGTTGTCAGTGTGGACAAAGGAAGCAGAGCTGT...TGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 90 bp | AGCAGCTCAGGAGCTCAGTTCTCTCAGGGTTTAGGTCCAGAGCAGTaGTCTTCCCTAACAGTTCCATCTCTCGGACCACACTCTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSGAQFSQGLGPEQ*SSLTVPSLGPHSLT Trigger: GGTCAGAGAGTGTGGTCCGAGAGATGGAACTGTTAGGGAAGATCACTGCTCTGGACCTAAACCCTGAGAGAACTGAGCTCCTGAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 90 bp | AGACCAAAGATATTAGTGATAGAATCCAGAAGGCCTCCAGCAGGCTaGGAGAGTCGCTTAGTAGCTGCTCTGCTGACAGCTCGGACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPKILVIESRRPPAG*ESRLVAALLTARTG Trigger: TCCCGTCCGAGCTGTCAGCAGAGCAGCTACTAAGCGACTCTCGCAGCCTGCTGGAGGCCTTCTGGATTCTATCACTAATATCTTTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113190.3 |
||
| CDS CCA 90 bp | ATCTTTACCAGAAGCAGGATGAGTGTCCATGATATCCTGGGGGACTaGGATGGAAGAGACAGAGCGTCTCGTAGCTGCTCTGCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IFTRSRMSVHDILGD*DGRDRASRSCSADS Trigger: GCTGTCAGCAGAGCAGCTACGAGACGCTCTGTCTCTTCCATCCCAGTCCCCCAGGATATCATGGACACTCATCCTGCTTCTGGTAAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113186.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAACTGAACTGCACTGCGTaGACCTCTCCGTCATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVLPMRYGRSELVVFPTQLNCTA*TSPSCA Trigger: TGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAG...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | ATGTGCACGGGCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCGTTTTTATGCAGACTTaGCTGCGGAGATCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MCTGEQDRECFPSPAFIIVFMQT*LRRSQS Trigger: ACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAAC...GATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGCCCGTGCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | CCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTCCATCCACTCATTACACATaGTTCAGTGCAAACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTLHCTHRQWLASPLSAPSTHYT*FSANNV Trigger: GACATTGTTTGCACTGAACAATGTGTAATGAGTGGA...TGGAGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAACAGTCAGAGCCGCATTaGAATCCAGGCGCACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PAEDAGFSSETRHTTSPEQSEPH*NPGALN Trigger: ATTCAGTGCGCCTGGATTCAAATGCGGCTCTGACTG...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATCCTTCCAGACAGGGAGCCCTaGAATTCACATTTATCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVRPDIPPALKTAPPILPDREP*NSHLSP Trigger: CGGAGATAAATGTGAATTCAAGGGCTCCCTGTCTGG...AAGGATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS TCA 90 bp | TCCTTGTCCTTCTGCTGCATTTGGTTGTTCAGGTCAATCACCAACTaGGCTAACTCCCCACGCTTCTTGTGCAGTTCGGTCAGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSFCCIWLFRSITN*ANSPRFLCSSVSSS Trigger: GGAAGAGCTGACCGAACTGCACAAGAAGCGTGGGGAGTTAGCTCAGTTGGTGATTGACCTGAACAACCAAATGCAGCAGAAGGACAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CCA 90 bp | ATCTTTACCAGAAGCAGGATGAGTGTCCATGATATCCTGGGGGACTaGGATGGAAGAGACAGAGCGTCTCCTGGCAGCATCAGAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: IFTRSRMSVHDILGD*DGRDRASPGSIRRM Trigger: CATTCTTCTGATGCTGCCAGGAGACGCTCTGTCTCTTCCATCCCAGTCCCCCAGGATATCATGGACACTCATCCTGCTTCTGGTAAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTACGGCACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGAGCTCTTCCTGGTGTTaGATCCTCAACTGGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LRHHMASALFWEDTSFSKSSSWC*ILNWAI Trigger: AATGGCCCAGTTGAGGATCAAACACCAGGAAGAGCT...CTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCCTTCTGCAGCCGTGCTaGACGCCTCCTGGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSQPLETLSQSSQESYGLLQPC*TPPGVL Trigger: AAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAAG...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCACAGTCCTCAGGTAGAGGTTCCTTaGCTGCTTCTGCAAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSHLCCKFYQTGKGWHSPQVEVP*LLLQAP Trigger: AGGAGCTTGCAGAAGCAGCAAAGGAACCTCTACCTG...AGGACTGTGCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGAACAGTGTGGAAGCAAAAACAGGTAGAGGTTCCTTaGCTGCTTCTGCAAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSTHVVPAVQRTVWKQKQVEVP*LLLQAP Trigger: AGGAGCTTGCAGAAGCAGCAAAGGAACCTCTACCTG...TTTTTGCTTCCACACTGTTCTCTGGACAGCAGGGACAACATGAGTGCTGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGTCCCTCTTCCCGAGCTCCAGCACTCATGTTGTCCCTGCTGTCCAGAGGGCTTGCAAAATCATTaGAAGCTGCTAATAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAVPLPELQHSCCPCCPEGLQNH*KLLIGK Trigger: CTTACCTATTAGCAGCTTCAAATGATTTTGCAAGCC...CTCTGGACAGCAGGGACAACATGAGTGCTGGAGCTCGGGAAGAGGGACAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | AGACTTTGGAAAGATGGGAAGAGCACAGGGGACCCAATACCCGGTGTGTGGGGTCAGTCCAGATTCGGCTaGCAAAATCATTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLWKDGKSTGDPIPGVWGQSRFG*QNHLKL Trigger: CAGCTTCAAATGATTTTGCAAGCCGAATCTGGACTG...ACCCCACACACCGGGTATTGGGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACAGTTTTTATGCAGACTTaGCTGCGGAGATCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTVFMQT*LRRSQS Trigger: ACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAAC...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS TCA 90 bp | CAAACACTGTTTTTATGCAGACTTTGCTGCGGAGATCCCAGAGTTTaGGGGTCCGGTCGTGACTTCCTGAGACAATCCGTGCATTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QTLFLCRLCCGDPRV*GSGRDFLRQSVHCP Trigger: TGGACAATGCACGGATTGTCTCAGGAAGTCACGACCGGACCCTCAAACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAACAGTGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS CCA 90 bp | TTGGCTTCTTGGGCCTTCTCAGCCATCCATCTGGTGACCAGTTCCTaGTTCTCCTCAGTAGTTTTCCTCAGTTTCTCTTCTAGGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LASWAFSAIHLVTSS*FSSVVFLSFSSRAV Trigger: TACTGCCCTAGAAGAGAAACTGAGGAAAACTACTGAGGAGAACCAGGAACTGGTCACCAGATGGATGGCTGAGAAGGCCCAAGAAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS CCA 90 bp | GTTGACCTCTCCGTCATGCGCATCGAAGACATACGAGGCAGTAGTTaGGACTCTCACATCTTTACCAGAAGCAGGATGAGTGTCCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VDLSVMRIEDIRGSS*DSHIFTRSRMSVHD Trigger: ATCATGGACACTCATCCTGCTTCTGGTAAAGATGTGAGAGTCCCAACTACTGCCTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TTACCAACACTGCACTGCACGCACAGGCAGTGGCTGGCCTCACCACTCTCTGCTTTATTTCATGCCTATTaGGCATGTCATGCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPTLHCTHRQWLASPLSALFHAY*ACHAFL Trigger: CAGAAAAGCATGACATGCCAAATAGGCATGAAATAA...AGCAGAGAGTGGTGAGGCCAGCCACTGCCTGTGCGTGCAGTGCAGTGTTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCCCAGCCTTCATCATCACCAGCTCCTAGGTAGGCTTCTCTTACCAACATTCTGCTGCATTTGGTaGTTCAGGTCAATCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SQPSLHHHQLLGRLLLPTFCCIW*FRSITN Trigger: GTTGGTGATTGACCTGAACAACCAAATGCAGCAGAA...TGTTGGTAAGAGAAGCCTACCTAGGAGCTGGTGATGATGAAGGCTGGGCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | ACTCCACAGAAAGGGGGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGATTCTCATTCTCTGCATaGAGGCGATTGGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPQKGGEHQATTDFGKMGFSFSA*RRLASW Trigger: CCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAA...TCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCCCCCTTTCTGTGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCCTGAACTGCACTGCGTaGACCTCTCCGTCATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSKFSRKLRHHMASALFLNCTA*TSPSCA Trigger: TGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAG...GAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | GCGAGCAGGACAGAGAATGCTTTCCCAGCCCAGCCTTCATCATCACCAGCTCCTGGCTTGCAAAATCATTaGAAGCTGCTAATAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASRTENAFPAQPSSSPAPGLQNH*KLLIGK Trigger: CTTACCTATTAGCAGCTTCAAATGATTTTGCAAGCC...AGGAGCTGGTGATGATGAAGGCTGGGCTGGGAAAGCATTCTCTGTCCTGCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCTGAAGATGCAGGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAACAGTCCAGATTCGGCTaGCAAAATCATTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAEDAGFSSETRHTTSPEQSRFG*QNHLKL Trigger: CAGCTTCAAATGATTTTGCAAGCCGAATCTGGACTG...TTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACCTGCATCTTCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTACGGCACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGGTGCAAACAATGTCATaGCAGCTGGATCCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRHHMASALFWEDTSFSKVQTMS*QLDPAN Trigger: GTTTGCAGGATCCAGCTGCAATGACATTGTTTGCAC...CTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 90 bp | GGACGGGAGAGGTCTCTTCTGTGTGGTCTGAGGTCTCATCCACAATaGCTTCAATGTCATCATCCTGTTCAACAGGTAGAGGTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRERSLLCGLRSHPQ*LQCHHPVQQVEVPL Trigger: CAAAGGAACCTCTACCTGTTGAACAGGATGATGACATTGAAGTCATTGTGGATGAGACCTCAGACCACACAGAAGAGACCTCTCCCGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTACGGCACCACATGGCTTCAGCTCTTTTCTGGGAGGACACATCATTCTCCAAGTTCATCTGTATCTCCTaGTCCTTCTGCTGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRHHMASALFWEDTSFSKFICIS*SFCCIW Trigger: CCAAATGCAGCAGAAGGACAAGGAGATACAGATGAA...CTTGGAGAATGATGTGTCCTCCCAGAAAAGAGCTGAAGCCATGTGGTGCCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 90 bp | TCAGTAGTTTTCCTCAGTTTCTCTTCTAGGGCAGTAAAAGTAATCTaGAGGGCGTCATACTCATCCTTCAGGGTCTGGTTGGCTACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVVFLSFSSRAVKVI*RASYSSFRVWLATS Trigger: CGAGGTAGCCAACCAGACCCTGAAGGATGAGTATGACGCCCTGCAGATTACTTTTACTGCCCTAGAAGAGAAACTGAGGAAAACTACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS-3UTR CAA 90 bp | GGCGAGCATCAGGCTACAACAGACTTTGGAAAGATGGGAAGAGCACAGGGGACCTTATTTCATGCCTATTaGGCATGTCATGCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GEHQATTDFGKMGRAQGTLFHAY*ACHAFL Trigger: CAGAAAAGCATGACATGCCAAATAGGCATGAAATAA...GGTCCCCTGTGCTCTTCCCATCTTTCCAAAGTCTGTTGTAGCCTGATGCTCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAATTCTGCTGCATTTGGTaGTTCAGGTCAATCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PVLPMRYGRSELVVFPTQFCCIW*FRSITN Trigger: GTTGGTGATTGACCTGAACAACCAAATGCAGCAGAA...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTACTCCCCATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAATTCATCTGTATCTCCTaGTCCTTCTGCTGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVLPMRYGRSELVVFPTQFICIS*SFCCIW Trigger: CCAAATGCAGCAGAAGGACAAGGAGATACAGATGAA...TTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATGGGGAGTACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCCCAGACAGGGAGCCCTaGAATTCACATTTATCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KDVFLTSAANSTRQGKVGPDREP*NSHLSP Trigger: CGGAGATAAATGTGAATTCAAGGGCTCCCTGTCTGG...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCCAGTCAGAGCCGCATTaGAATCCAGGCGCACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKSKFSRKLRHHMASALFQSEPH*NPGALN Trigger: ATTCAGTGCGCCTGGATTCAAATGCGGCTCTGACTG...GAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS CCA 90 bp | GCAGTTTGGTGCGCAGGTCCAGGCAGTTTGTCTCCAGGTCAGAGATaGTCTGTAAATACTCCGAAATCTTTGCTTCATTCATCTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: AVWCAGPGSLSPGQR*SVNTPKSLLHSSVS Trigger: AGATACAGATGAATGAAGCAAAGATTTCGGAGTATTTACAGACCATCTCTGACCTGGAGACAAACTGCCTGGACCTGCGCACCAAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CCA 90 bp | ATCTTTACCAGAAGCAGGATGAGTGTCCATGATATCCTGGGGGACTaGGATGGAAGAGACAGAGCGTCTCCCAAAGATATTAGTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: IFTRSRMSVHDILGD*DGRDRASPKDISDR Trigger: TCTATCACTAATATCTTTGGGAGACGCTCTGTCTCTTCCATCCCAGTCCCCCAGGATATCATGGACACTCATCCTGCTTCTGGTAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027512.13 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGCAGTGAGACCAGACATACCACCAGCCCTGAAAACAGCTCCACCCATTTATTTCATGCCTATTaGGCATGTCATGCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFSSETRHTTSPENSSTHLFHAY*ACHAFL Trigger: CAGAAAAGCATGACATGCCAAATAGGCATGAAATAA...ATGGGTGGAGCTGTTTTCAGGGCTGGTGGTATGTCTGGTCTCACTGCTGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | CTTAAGTCAAAGTTCTCAAGAAAGCTACGGCACCACATGGCTTCAGCTCTTTTCAGCTCTTCCTGGTGTTaGATCCTCAACTGGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LKSKFSRKLRHHMASALFSSSWC*ILNWAI Trigger: AATGGCCCAGTTGAGGATCAAACACCAGGAAGAGCT...GAAAAGAGCTGAAGCCATGTGGTGCCGTAGCTTTCTTGAGAACTTTGACTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCGTTTTTATGCAGACTTaGCTGCGGAGATCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDVFLTSAANSTRQGKVGVFMQT*LRRSQS Trigger: ACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAAC...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGAGTGCAAACAATGTCATaGCAGCTGGATCCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRVQTMS*QLDPAN Trigger: GTTTGCAGGATCCAGCTGCAATGACATTGTTTGCAC...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGAACAGCTCTGCTTCCTTaGTCCACACTGACAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRTALLP*STLTTC Trigger: ACATGTTGTCAGTGTGGACAAAGGAAGCAGAGCTGT...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS-3UTR CAA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGATTCTGCTGCATTTGGTaGTTCAGGTCAATCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRFCCIW*FRSITN Trigger: GTTGGTGATTGACCTGAACAACCAAATGCAGCAGAA...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | AAAGATGTGTTTCTCACCTCTGCTGCAAATTCTACCAGACAGGGAAAGGTTGGCTTCATCTGTATCTCCTaGTCCTTCTGCTGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDVFLTSAANSTRQGKVGFICIS*SFCCIW Trigger: CCAAATGCAGCAGAAGGACAAGGAGATACAGATGAA...GCCAACCTTTCCCTGTCTGGTAGAATTTGCAGCAGAGGTGAGAAACACATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | TGTTGGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTAGAGACAATCCGTGCATaGTCCAGCAGGAACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CWFFSAIRDLKSKFSRKLETIRA*SSRNLA Trigger: TGCCAAGTTCCTGCTGGACAATGCACGGATTGTCTC...TAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CCA 90 bp | GTCCACTCATTACACATTGTTCAGTGCAAACAATGTCATTGCAGCTaGATCCTGCAAACACTGTTTTTATGCAGACTTTGCTGCGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHSLHIVQCKQCHCS*ILQTLFLCRLCCGD Trigger: ATCTCCGCAGCAAAGTCTGCATAAAAACAGTGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCACTGAACAATGTGTAATGAGTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | CTAGGGACTTGCAGAGTCAGTTTGGTTCAGTGTTGGTTCTTCTCAGCCATTAGAGGCTTGCAAAATCATTaGAAGCTGCTAATAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGTCRVSLVQCWFFSAIRGLQNH*KLLIGK Trigger: CTTACCTATTAGCAGCTTCAAATGATTTTGCAAGCC...TCTAATGGCTGAGAAGAACCAACACTGAACCAAACTGACTCTGCAAGTCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | TGTTGGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTATTCTCATTCTCTGCATaGAGGCGATTGGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWFFSAIRDLKSKFSRKLFSFSA*RRLASW Trigger: CCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAA...TAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | GGTTCTTCTCAGCCATTAGAGACCTTAAGTCAAAGTTCTCAAGAAAGCTACGGCTCCACTCATTACACATaGTTCAGTGCAAACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSSQPLETLSQSSQESYGSTHYT*FSANNV Trigger: GACATTGTTTGCACTGAACAATGTGTAATGAGTGGA...GCCGTAGCTTTCTTGAGAACTTTGACTTAAGGTCTCTAATGGCTGAGAAGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS-3UTR CAA 90 bp | CATGAGGTATGGAAGGTCAGAGTTAGTAGTGTTTCCCACCCAAATGCAGACAAATCCACTCATTACACATaGTTCAGTGCAAACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: HEVWKVRVSSVSHPNADKSTHYT*FSANNV Trigger: GACATTGTTTGCACTGAACAATGTGTAATGAGTGGA...TTTGTCTGCATTTGGGTGGGAAACACTACTAACTCTGACCTTCCATACCTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 90 bp | CAAAATGTCCACTCATTACACATTGTTCAGTGCAAACAATGTCATTaGAGCTGGATCCTGCAAACACTGTTTTTATGCAGACTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNVHSLHIVQCKQCH*SWILQTLFLCRLCC Trigger: GCAGCAAAGTCTGCATAAAAACAGTGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCACTGAACAATGTGTAATGAGTGGACATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 72 bp | TGCAGTCGGTCCCGGCGCCTCAGTTCCTCCGCGATGTaGCGCTTCCAGCGGGGAAAGTCTGCGGCGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSRSRRLSSSAM*RFQRGKSAARR Trigger: CCTGCGCGCCGCAGACTTTCCCCGCTGGAAGCGTCACATCGCGGAGGAACTGAGGCGCCGGGACCGACTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CCA 72 bp | GCGGTCCATGCCTCCAGTGGCCAGCAACCGGGAGCCTaGACTGAACTGCACTGCGTTGACCTCTCCGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: AVHASSGQQPGA*TELHCVDLSVM Trigger: CATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACTGGAGGCATGGACCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 72 bp | CCTCCAGTGGCCAGCAACCGGGAGCCTGGACTGAACTaGACTGCGTTGACCTCTCCGTCATGCGCATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPVASNREPGLN*TALTSPSCASK Trigger: CTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 72 bp | GTATACTGCAGAATGATCTCCTCGAACGCCTGCCTCTaGAGTCGGTCCCGGCGCCTCAGTTCCTCCGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: VYCRMISSNACL*SRSRRLSSSAM Trigger: CATCGCGGAGGAACTGAGGCGCCGGGACCGACTGCAGAGGCAGGCGTTCGAGGAGATCATTCTGCAGTATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CCA 72 bp | TCAGGGTCTGGTTGGCTACCTCGAGGTCCTGCAGTTTaGTGCGCAGGTCCAGGCAGTTTGTCTCCAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSGWLPRGPAV*CAGPGSLSPGQ Trigger: CTGACCTGGAGACAAACTGCCTGGACCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CAA 72 bp | GCCAGCAACCGGGAGCCTGGACTGAACTGCACTGCGTaGACCTCTCCGTCATGCGCATCGAAGACATACGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASNREPGLNCTA*TSPSCASKTYE Trigger: CTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 90 bp | CCTCCAGTGGCCAGCAACCGGGAGCCTGGACTGAACTGCACTGCGTaGACCTCTCCGTCATGCGCATCGAAGACATACGAGGCAGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PPVASNREPGLNCTA*TSPSCASKTYEAVV Trigger: AACTACTGCCTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 72 bp | AACTTGGTATACTGCAGAATGATCTCCTCGAACGCCTaGCTCTGCAGTCGGTCCCGGCGCCTCAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLVYCRMISSNA*LCSRSRRLSSS Trigger: GGAGGAACTGAGGCGCCGGGACCGACTGCAGAGGCAGGCGTTCGAGGAGATCATTCTGCAGTATACCAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 72 bp | AGTGGCCAGCAACCGGGAGCCTGGACTGAACTGCACTaGGTTGACCTCTCCGTCATGCGCATCGAAGACATA | + |
|
Preference number: 6 (lower is better) Translates to: SGQQPGAWTELH*VDLSVMRIEDI Trigger: TATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGGCTCCCGGTTGCTGGCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS CCA 72 bp | TCTGCAGGGCGTCATACTCATCCTTCAGGGTCTGGTTaGCTACCTCGAGGTCCTGCAGTTTGGTGCGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAGRHTHPSGSG*LPRGPAVWCAG Trigger: ACCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGAGTATGACGCCCTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS CAA 72 bp | TTCAGGGTCTGGTTGGCTACCTCGAGGTCCTGCAGTTaGGTGCGCAGGTCCAGGCAGTTTGTCTCCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FRVWLATSRSCS*VRRSRQFVSRS Trigger: TGACCTGGAGACAAACTGCCTGGACCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS CAA 72 bp | ATCTGCAGGGCGTCATACTCATCCTTCAGGGTCTGGTaGGCTACCTCGAGGTCCTGCAGTTTGGTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ICRASYSSFRVW*ATSRSCSLVRR Trigger: CCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGAGTATGACGCCCTGCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
||
| CDS GCA 72 bp | CCGTGCTTGACGCCTCCTGGAGTCCTTCTCATTCTCTaGATTGAGGCGATTGGCTTCTTGGGCCTTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCLTPPGVLLIL*IEAIGFLGLLS Trigger: GCTGAGAAGGCCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGACTCCAGGAGGCGTCAAGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
||
| CDS GCA 72 bp | CACATTTATCTCCGAATGCTTCCCAAAGTTTCACCCTaGGGTCCATGCCTCCAGTGGCCAGCAACCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIYLRMLPKVSP*GPCLQWPATGS Trigger: GCTCCCGGTTGCTGGCCACTGGAGGCATGGACCGCAGGGTGAAACTTTGGGAAGCATTCGGAGATAAATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CCA 72 bp | GTAATCTGCAGGGCGTCATACTCATCCTTCAGGGTCTaGTTGGCTACCTCGAGGTCCTGCAGTTTGGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: VICRASYSSFRV*LATSRSCSLVR Trigger: GCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGAGTATGACGCCCTGCAGATTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CAA 90 bp | GTAAAAGTAATCTGCAGGGCGTCATACTCATCCTTCAGGGTCTGGTaGGCTACCTCGAGGTCCTGCAGTTTGGTGCGCAGGTCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VKVICRASYSSFRVW*ATSRSCSLVRRSRQ Trigger: CTGCCTGGACCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCAACCAGACCCTGAAGGATGAGTATGACGCCCTGCAGATTACTTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS TCA 72 bp | CTTGACGCCTCCTGGAGTCCTTCTCATTCTCTGCATTaGGGCGATTGGCTTCTTGGGCCTTCTCAGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: LDASWSPSHSLH*GDWLLGPSQPS Trigger: GGATGGCTGAGAAGGCCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGACTCCAGGAGGCGTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 72 bp | GAGATCCCAGAGTTTGAGGGTCCGGTCGTGACTTCCTaGGACAATCCGTGCATTGTCCAGCAGGAACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: EIPEFEGPVVTS*DNPCIVQQELG Trigger: GCCAAGTTCCTGCTGGACAATGCACGGATTGTCTCAGGAAGTCACGACCGGACCCTCAAACTCTGGGATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 72 bp | TTCCTTTGCTGCTTCTGCAAGCTCCTTCTGCAGCCGTaGTTGACGCCTCCTGGAGTCCTTCTCATTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLCCFCKLLLQP*LTPPGVLLILC Trigger: GCAGAGAATGAGAAGGACTCCAGGAGGCGTCAAGCACGGCTGCAGAAGGAGCTTGCAGAAGCAGCAAAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 72 bp | CCTGGACTGAACTGCACTGCGTTGACCTCTCCGTCATaGGCATCGAAGACATACGAGGCAGTAGTTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: PGLNCTALTSPS*ASKTYEAVVGT Trigger: AGTCCCAACTACTGCCTCGTATGTCTTCGATGCGCATGACGGAGAGGTCAACGCAGTGCAGTTCAGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 72 bp | CGAGGTCCTGCAGTTTGGTGCGCAGGTCCAGGCAGTTaGTCTCCAGGTCAGAGATGGTCTGTAAATACTCCG | + |
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Preference number: 6 (lower is better) Translates to: RGPAVWCAGPGS*SPGQRWSVNTP Trigger: CGGAGTATTTACAGACCATCTCTGACCTGGAGACAAACTGCCTGGACCTGCGCACCAAACTGCAGGACCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS TCA 72 bp | GGAACTTGGCAGAGAGGACTTTCCCGCTGTGGCCTGTaGGTGTGTGCCGTAATCGATAATCATCCACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: GTWQRGLSRCGL*VCAVIDNHPQS Trigger: GGACTGTGGATGATTATCGATTACGGCACACACTCACAGGCCACAGCGGGAAAGTCCTCTCTGCCAAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 72 bp | GGAGCTCAGTTCTCTCAGGGTTTAGGTCCAGAGCAGTaGTCTTCCCTAACAGTTCCATCTCTCGGACCACAC | + |
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Preference number: 6 (lower is better) Translates to: GAQFSQGLGPEQ*SSLTVPSLGPH Trigger: GTGTGGTCCGAGAGATGGAACTGTTAGGGAAGATCACTGCTCTGGACCTAAACCCTGAGAGAACTGAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CCA 72 bp | TCCTTCTCATTCTCTGCATTGAGGCGATTGGCTTCTTaGGCCTTCTCAGCCATCCATCTGGTGACCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SFSFSALRRLAS*AFSAIHLVTSS Trigger: GGAACTGGTCACCAGATGGATGGCTGAGAAGGCCCAAGAAGCCAATCGCCTCAATGCAGAGAATGAGAAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CAA 90 bp | TGGCTACCTCGAGGTCCTGCAGTTTGGTGCGCAGGTCCAGGCAGTTaGTCTCCAGGTCAGAGATGGTCTGTAAATACTCCGAAATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WLPRGPAVWCAGPGS*SPGQRWSVNTPKSL Trigger: CAAAGATTTCGGAGTATTTACAGACCATCTCTGACCTGGAGACAAACTGCCTGGACCTGCGCACCAAACTGCAGGACCTCGAGGTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS TCA 72 bp | TTTTTATGCAGACTTTGCTGCGGAGATCCCAGAGTTTaGGGGTCCGGTCGTGACTTCCTGAGACAATCCGTG | + |
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Preference number: 6 (lower is better) Translates to: FLCRLCCGDPRV*GSGRDFLRQSV Trigger: CACGGATTGTCTCAGGAAGTCACGACCGGACCCTCAAACTCTGGGATCTCCGCAGCAAAGTCTGCATAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 72 bp | GAAGAGACAGAGCGTCTCCTGGCAGCATCAGAAGAATaGTGTCCCAAAAGGGGAGATTCGGACAGACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: EETERLLAASEE*CPKRGDSDRPK Trigger: CTTTGGTCTGTCCGAATCTCCCCTTTTGGGACATCATTCTTCTGATGCTGCCAGGAGACGCTCTGTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113190.3 |
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| CDS TCA 72 bp | TTCTGCTGCATTTGGTTGTTCAGGTCAATCACCAACTaGGCTAACTCCCCACGCTTCTTGTGCAGTTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: FCCIWLFRSITN*ANSPRFLCSSV Trigger: GACCGAACTGCACAAGAAGCGTGGGGAGTTAGCTCAGTTGGTGATTGACCTGAACAACCAAATGCAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS TCA 72 bp | GTAGTTGGGACTCTCACATCTTTACCAGAAGCAGGATaGGTGTCCATGATATCCTGGGGGACTGGGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: VVGTLTSLPEAG*VSMISWGTGME Trigger: TTCCATCCCAGTCCCCCAGGATATCATGGACACTCATCCTGCTTCTGGTAAAGATGTGAGAGTCCCAACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CCA 72 bp | TCCGTCATGCGCATCGAAGACATACGAGGCAGTAGTTaGGACTCTCACATCTTTACCAGAAGCAGGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: SVMRIEDIRGSS*DSHIFTRSRMS Trigger: ACTCATCCTGCTTCTGGTAAAGATGTGAGAGTCCCAACTACTGCCTCGTATGTCTTCGATGCGCATGACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS TCA 72 bp | AGGTCTCTTCTGTGTGGTCTGAGGTCTCATCCACAATaGCTTCAATGTCATCATCCTGTTCAACAGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSLLCGLRSHPQ*LQCHHPVQQVE Trigger: CTCTACCTGTTGAACAGGATGATGACATTGAAGTCATTGTGGATGAGACCTCAGACCACACAGAAGAGACCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 72 bp | CCAGGTCAGAGATGGTCTGTAAATACTCCGAAATCTTaGCTTCATTCATCTGTATCTCCTTGTCCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGQRWSVNTPKS*LHSSVSPCPSA Trigger: AGCAGAAGGACAAGGAGATACAGATGAATGAAGCAAAGATTTCGGAGTATTTACAGACCATCTCTGACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CAA 90 bp | TATCATTCCACGCACCATCATGTCCAGGACTTATTTCATGCCTATTaGGCATGTCATGCTTTTCTGCTTGTAGTTTCTGGGTCAATACTG | + |
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Preference number: 6 (lower is better) Translates to: YHSTHHHVQDLFHAY*ACHAFLLVVSGSIL Trigger: CAGTATTGACCCAGAAACTACAAGCAGAAAAGCATGACATGCCAAATAGGCATGAAATAAGTCCTGGACATGATGGTGCGTGGAATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 90 bp | TCTCGGACCACACTCTCTGACCGGATATCCCAGAAACGAATTTTCTaGTCAAAATGTCCACTCATTACACATTGTTCAGTGCAAACAATG | + |
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Preference number: 6 (lower is better) Translates to: SRTTLSDRISQKRIF*SKCPLITHCSVQTM Trigger: CATTGTTTGCACTGAACAATGTGTAATGAGTGGACATTTTGACAAGAAAATTCGTTTCTGGGATATCCGGTCAGAGAGTGTGGTCCGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 72 bp | TACTCCGAAATCTTTGCTTCATTCATCTGTATCTCCTaGTCCTTCTGCTGCATTTGGTTGTTCAGGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: YSEIFASFICIS*SFCCIWLFRSI Trigger: GATTGACCTGAACAACCAAATGCAGCAGAAGGACAAGGAGATACAGATGAATGAAGCAAAGATTTCGGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 ENSMUST00000144047.8 |
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| CDS CAA 72 bp | AATCATCCACAGTCCAGATTCGGCTTGCAAAATCATTaGAAGCTGCTAATAGGTAAGCTCCAGCACTATCAA | + |
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Preference number: 6 (lower is better) Translates to: NHPQSRFGLQNH*KLLIGKLQHYQ Trigger: TTGATAGTGCTGGAGCTTACCTATTAGCAGCTTCAAATGATTTTGCAAGCCGAATCTGGACTGTGGATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 72 bp | CCACTCATTACACATTGTTCAGTGCAAACAATGTCATaGCAGCTGGATCCTGCAAACACTGTTTTTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLITHCSVQTMS*QLDPANTVFMQ Trigger: CTGCATAAAAACAGTGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCACTGAACAATGTGTAATGAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 90 bp | GTAATCGATAATCATCCACAGTCCAGATTCGGCTTGCAAAATCATTaGAAGCTGCTAATAGGTAAGCTCCAGCACTATCAAATTCAATGC | + |
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Preference number: 6 (lower is better) Translates to: VIDNHPQSRFGLQNH*KLLIGKLQHYQIQC Trigger: GCATTGAATTTGATAGTGCTGGAGCTTACCTATTAGCAGCTTCAAATGATTTTGCAAGCCGAATCTGGACTGTGGATGATTATCGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 90 bp | TCAAAATGTCCACTCATTACACATTGTTCAGTGCAAACAATGTCATaGCAGCTGGATCCTGCAAACACTGTTTTTATGCAGACTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SKCPLITHCSVQTMS*QLDPANTVFMQTLL Trigger: CAGCAAAGTCTGCATAAAAACAGTGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCACTGAACAATGTGTAATGAGTGGACATTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS GCA 72 bp | CACTCATTACACATTGTTCAGTGCAAACAATGTCATTaGAGCTGGATCCTGCAAACACTGTTTTTATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSLHIVQCKQCH*SWILQTLFLCR Trigger: TCTGCATAAAAACAGTGTTTGCAGGATCCAGCTGCAATGACATTGTTTGCACTGAACAATGTGTAATGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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| CDS CAA 72 bp | ACACTCTCTGACCGGATATCCCAGAAACGAATTTTCTaGTCAAAATGTCCACTCATTACACATTGTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: TLSDRISQKRIF*SKCPLITHCSV Trigger: CACTGAACAATGTGTAATGAGTGGACATTTTGACAAGAAAATTCGTTTCTGGGATATCCGGTCAGAGAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027512.13 ENSMUST00000113186.8 ENSMUST00000113190.3 |
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