Pregenerated sensors for ATG14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037526Ensembl transcript IDs: ENSMUST00000042988.7, ENSMUST00000226299.2, ENSMUST00000228784.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCTAGAAGTAGGTGGTAAAACACGAGCCCAGCAGTCGCAGAGCTaGGCACAGAACAGACTCCAGCCGCCTGCTCCACAGCTGGGTATC | + |
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Preference number: 1 (lower is better) Translates to: VLEVGGKTRAQQSQS*AQNRLQPPAPQLGI Trigger: GATACCCAGCTGTGGAGCAGGCGGCTGGAGTCTGTTCTGTGCTCAGCTCTGCGACTGCTGGGCTCGTGTTTTACCACCTACTTCTAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 90 bp | AGAACAGACTCCAGCCGCCTGCTCCACAGCTGGGTATCTAGAGCTTaGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTTCCTACACTT | + |
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Preference number: 1 (lower is better) Translates to: RTDSSRLLHSWVSRA*ERGEPGQDEVLPTL Trigger: AAGTGTAGGAAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATACCCAGCTGTGGAGCAGGCGGCTGGAGTCTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR GCA 90 bp | TTTCCTCCTTCCCCAGACAACCACCTCTCCCGGATGAGGCCAAACTaGTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: FPPSPDNHLSRMRPN*CWPAGWSLKRMTEK Trigger: TTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGAGAGGTGGTTGTCTGGGGAAGGAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 90 bp | AGACAACCACCTCTCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTaGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: RQPPLPDEAKLLLAC*LVSQEDDRKTNSAF Trigger: AAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGAGAGGTGGTTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 90 bp | ACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTaGAAACACCTGCTACTAGTTAACCCCACCACCACCACCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TPGTRRPQEQEGRVP*KHLLLVNPTTTTKE Trigger: TTCCTTGGTGGTGGTGGTGGGGTTAACTAGTAGCAGGTGTTTCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 90 bp | TGCTGGTCACTTACTGTGAGGGACGATGACAAAAGTGCCTCTGATTaGTATGAAATAAAACAAGGCCACCCAGCCCTGTGCTTTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: CWSLTVRDDDKSASD*YEIKQGHPALCFLQ Trigger: TTGCAGAAAGCACAGGGCTGGGTGGCCTTGTTTTATTTCATATCAATCAGAGGCACTTTTGTCATCGTCCCTCACAGTAAGTGACCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 90 bp | TCAGCCTTTGTCTTTCATTCCTCATTACCAAGAAACACTTCTTTGTaGTCTGATCAAAGCCTAGGACTTAGTGTCAGGGAGACTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: SAFVFHSSLPRNTSL*SDQSLGLSVRETLH Trigger: GTGCAGAGTCTCCCTGACACTAAGTCCTAGGCTTTGATCAGATCACAAAGAAGTGTTTCTTGGTAATGAGGAATGAAAGACAAAGGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCACACAGACAAGGTTATaGGAGTGCAGTGGGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: HPGTSILRTWAQEPRAQATQTRL*ECSGKD Trigger: GTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGT...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCCAGTGGGAAAGACTCTaGGACACAAAATCAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: HPGTSILRTWAQEPRAQAQWERL*DTKSAF Trigger: AAATGCTGATTTTGTGTCTCAGAGTCTTTCCCACTG...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGGGGTTCTGACGTTGCAGCTTTCCCAATGCACACCTGAACCCCACCCAAAACTGCTGCTGGCCTaGTGGCTGGTCTCTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SKGVLTLQLSQCTPEPHPKLLLA*WLVSQE Trigger: CTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTT...TGGGTGGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CCA 90 bp | AACCACAGTGTGAGTCAACAGAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGTGCTGGCCTGCTGGCTaGTCTCTCAAGAGGATGACA | + |
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Preference number: 2 (lower is better) Translates to: NHSVSQQKPGRGRLLKDLCWPAG*SLKRMT Trigger: TGTCATCCTCTTGAGAGACCAGCCAGCAGGCCAGCA...CAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTCTGTTGACTCACACTGTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTTGAGCATACTGAGGACCTaGGCCCAGGAGCCCCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: WPAGWSLKRMTEKQTQPLSILRT*AQEPRA Trigger: AGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCT...CAAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTAGAGCTTGGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTTCCTACACGTACCAACCACAGTGTaGGTCAACAGAAGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: YLELGNVGNLGRMKSFLHVPTTV*VNRSQG Trigger: GCCCTGGCTTCTGTTGACTCACACTGTGGTTGGTAC...GTGTAGGAAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTAGAGCTTGGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTTCCTACACCAGTGGGAAAGACTCTaGGACACAAAATCAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: YLELGNVGNLGRMKSFLHQWERL*DTKSAF Trigger: AAATGCTGATTTTGTGTCTCAGAGTCTTTCCCACTG...GTGTAGGAAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTTGACACAGACAAGGTTATaGGAGTGCAGTGGGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: WPAGWSLKRMTEKQTQPLTQTRL*ECSGKD Trigger: GTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGT...CAAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGATACAGACAATCCCAATaGCTTATCTCCCTTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGYRQSQ*LISLQN Trigger: ATTCTGAAGGGAGATAAGTCATTGGGATTGTCTGTA...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR GCA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCCGGATGAGGCCAAACTaGTGCTGGCCTGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCRMRPN*CWPAGW Trigger: CCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCG...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGACCCCATTCGCAGATATaGGTCTACAGAAATAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGPHSQI*VYRNKE Trigger: TTCTTTATTTCTGTAGACCCATATCTGCGAATGGGG...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CCA 90 bp | TATCTAGAGCTTGGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTTCCTACACCCCCATTCGCAGATATaGGTCTACAGAAATAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YLELGNVGNLGRMKSFLHPHSQI*VYRNKE Trigger: TTCTTTATTTCTGTAGACCCATATCTGCGAATGGGG...GTGTAGGAAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACCAGGAACCAGCATACTaGGGACCTGGGCCCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYQEPAY*GPGPRS Trigger: GCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTG...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGAGAATTTGGTTTCTTTaGTGTGTAGTAGGAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: TKEETGQQASDHVSVQPTRIWFL*CVVGNQ Trigger: CTGATTTCCTACTACACACCAAAGAAACCAAATTCT...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTACAGCAGTCGCAGAGCTaGGCACAGAACAGACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CGASECLLVLPCSKKSFLQQSQS*AQNRLQ Trigger: CTGGAGTCTGTTCTGTGCTCAGCTCTGCGACTGCTG...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAGCCTAGGCAGTCCGTaGTGGTCACTTACTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYSLGSP*WSLTVR Trigger: CCTCACAGTAAGTGACCAGCACGGACTGCCTAGGCT...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR GCA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCGTAGTTGGTGGCCTCTaGACTTTCTGTAGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCVVGGL*TFCSFL Trigger: GAGGAAGCTACAGAAAGTGCAGAGGCCACCAACTAC...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTATACACTTCTAATAACTaGCAAAGCGCCACAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: CGASECLLVLPCSKKSFLYTSNN*QSATAP Trigger: AGGTGCTGTGGCGCTTTGGCAGTTATTAGAAGTGTA...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTATACAGACAATCCCAATaGCTTATCTCCCTTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: CGASECLLVLPCSKKSFLYRQSQ*LISLQN Trigger: ATTCTGAAGGGAGATAAGTCATTGGGATTGTCTGTA...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTAGTAGGAACCAAACAGTaGTTGAAATGTGTATTTAAG | + |
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Preference number: 2 (lower is better) Translates to: CGASECLLVLPCSKKSFLVGTKQ*LKCVFK Trigger: CTTAAATACACATTTCAACCACTGTTTGGTTCCTAC...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR GCA 72 bp | TCCCCAGACAACCACCTCTCCCGGATGAGGCCAAACTaGTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: SPDNHLSRMRPN*CWPAGWSLKRM Trigger: CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGAGAGGTGGTTGTCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 72 bp | GAGCACAGAACAGACTCCAGCCGCCTGCTCCACAGCTaGGTATCTAGAGCTTGGGAACGTGGGGAACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: EHRTDSSRLLHS*VSRAWERGEPG Trigger: CCCAGGTTCCCCACGTTCCCAAGCTCTAGATACCCAGCTGTGGAGCAGGCGGCTGGAGTCTGTTCTGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 72 bp | GTAGGTGGTAAAACACGAGCCCAGCAGTCGCAGAGCTaGGCACAGAACAGACTCCAGCCGCCTGCTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: VGGKTRAQQSQS*AQNRLQPPAPQ Trigger: CTGTGGAGCAGGCGGCTGGAGTCTGTTCTGTGCTCAGCTCTGCGACTGCTGGGCTCGTGTTTTACCACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 72 bp | TCCAGCCGCCTGCTCCACAGCTGGGTATCTAGAGCTTaGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SSRLLHSWVSRA*ERGEPGQDEVL Trigger: AAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATACCCAGCTGTGGAGCAGGCGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 72 bp | CACCACCACCAAGGAAGAAACCGGACAGCAAGCGAGTaGCCACGTAAGTGTTCAGCCAACGCTCGGGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: HHHQGRNRTASE*PRKCSANARVA Trigger: TGCTACCCGAGCGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGTGGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 72 bp | GAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGGCTaGGGTACCATCACACCAGTCACAACAGGAGGATAT | + |
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Preference number: 3 (lower is better) Translates to: EARAWQTAEGPG*GTITPVTTGGY Trigger: ATATCCTCCTGTTGTGACTGGTGTGATGGTACCTCAGCCAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 72 bp | CCTGACCTGGAAGTTTCAGTCGCAGCAAGGGGGTTCTaGCGTTGCAGCTTTCCCAATGCACACCTGAACCCC | + |
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Preference number: 3 (lower is better) Translates to: PDLEVSVAARGF*RCSFPNAHLNP Trigger: GGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCTGCGACTGAAACTTCCAGGTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR GCA 72 bp | CCACCTCTCCCGGATGAGGCCAAACTGCTGCTGGCCTaGTGGCTGGTCTCTCAAGAGGATGACAGAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: PPLPDEAKLLLA*WLVSQEDDRKT Trigger: TGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGAGAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR GCA 72 bp | GAGCATTTCCTGGGACAGCTGCTCCGCGCTACACTCTaGATAAGGTGCTGTCTTCAGTCTCAGAGACCCCAG | + |
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Preference number: 3 (lower is better) Translates to: EHFLGQLLRATL*IRCCLQSQRPQ Trigger: CTGGGGTCTCTGAGACTGAAGACAGCACCTTATGCAGAGTGTAGCGCGGAGCAGCTGTCCCAGGAAATGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 72 bp | CCTCTCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTaGCTGGTCTCTCAAGAGGATGACAGAAAAACAAAC | + |
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Preference number: 3 (lower is better) Translates to: PLPDEAKLLLAC*LVSQEDDRKTN Trigger: GTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGAAACAAACTCAGCCTTaGTCTTTCATTCCTCATTAC | + |
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Preference number: 3 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMKQTQP*SFIPHY Trigger: GTAATGAGGAATGAAAGACAAAGGCTGAGTTTGTTT...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 72 bp | AGCTTTCCCAATGCACACCTGAACCCCACCCAATGCTaGCCCCCATACCATGGTAAGTTACATTTCTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: SFPNAHLNPTQC*PPYHGKLHFLV Trigger: AACCAAGAAATGTAACTTACCATGGTATGGGGGTCAGCATTGGGTGGGGTTCAGGTGTGCATTGGGAAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGAAAACAAACTCAGCCTTaGTCTTTCATTCCTCATTAC | + |
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Preference number: 3 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGKQTQP*SFIPHY Trigger: GTAATGAGGAATGAAAGACAAAGGCTGAGTTTGTTT...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR CCA 72 bp | AAAGGTTTAGAAAACATCTGTGTGATCAACCTGACCTaGAAGTTTCAGTCGCAGCAAGGGGGTTCTGACGTT | + |
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Preference number: 3 (lower is better) Translates to: KGLENICVINLT*KFQSQQGGSDV Trigger: AACGTCAGAACCCCCTTGCTGCGACTGAAACTTCCAGGTCAGGTTGATCACACAGATGTTTTCTAAACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| 3UTR TCA 72 bp | CTTCCAAGCTCTATCGCAACTACACAGACAAGGTTATaGGAGTGCAGTGGGAAAGACTCTGAGACACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: LPSSIATTQTRL*ECSGKDSETQN Trigger: ATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAGTTGCGATAGAGCTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCCCTGACCTGCCTAGGTaGTCAGAGCGCGGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQAPDLPR*SERGLT Trigger: GGTCAGCCCGCGCTCTGAGCACCTAGGCAGGTCAGG...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCCGCTGCTGCTGGCAATaGGTGGGGACACCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQARCCWQ*VGTPGC Trigger: GCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCG...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCCACCAGCGCTGCTGCTaGCAATGGGTGGGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQAHQRCC*QWVGTP Trigger: AGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTG...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCCTCTTGGTGCCGCTGTaGTCGGCTGTAAAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQALLVPL*SAVKLL Trigger: CAGAAGCTTTACAGCCGAGCACAGCGGCACCAAGAG...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR GCA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGCCTGACCTGCCTAGGTaGTCAGAGCGCGGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMPDLPR*SERGLT Trigger: GGTCAGCCCGCGCTCTGAGCACCTAGGCAGGTCAGG...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCCTTGCTCACCATGCTTaGGGTCATGGCACTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQALAHHA*GHGTVS Trigger: ACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAG...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AACCACAGTGTGAGTCAACAGAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGCGCTGCTGCTGGCAATaGGTGGGGACACCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NHSVSQQKPGRGRLLKDLRCCWQ*VGTPGC Trigger: GCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCG...CAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTCTGTTGACTCACACTGTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AACCACAGTGTGAGTCAACAGAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGATGGGTGGGGACACCTaGGTGCTCTGGCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NHSVSQQKPGRGRLLKDLMGGDT*VLWLWD Trigger: GTCCCAGAGCCAGAGCACCCAGGTGTCCCCACCCAT...CAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTCTGTTGACTCACACTGTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AACCACAGTGTGAGTCAACAGAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGGACACCTGGGTGCTCTaGCTCTGGGACACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NHSVSQQKPGRGRLLKDLDTWVL*LWDTST Trigger: GGTGGAAGTGTCCCAGAGCCAGAGCACCCAGGTGTC...CAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTCTGTTGACTCACACTGTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | GAGACTCTGCACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGATCAGTTTCTGCTTGCTaGGGTTTTCGCCACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ETLHPGTSILRTWAQEPRSVSAC*GFRHRT Trigger: AGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGA...TCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTGCAGAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR TCA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGAGTGCATCAGGTTCCTaGGTGTGTGCAGTGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMSASGS*VCAVVA Trigger: TGCAACCACTGCACACACTCAGGAACCTGATGCACT...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCTCCATGTCAGGTCCTTaGGTTGTTTTCTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQASMSGP*VVFFSS Trigger: AGAAGAGAAGAAAACAACCCAAGGACCTGACATGGA...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | TATCTAGAGCTTGGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTTCCTACACTGGGTGCTCTGGCTCTaGGACACTTCCACCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLELGNVGNLGRMKSFLHWVLWL*DTSTGW Trigger: CCAGCCGGTGGAAGTGTCCCAGAGCCAGAGCACCCA...GTGTAGGAAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGATGGGTGGGGACACCTaGGTGCTCTGGCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKEETGQQASDHVSVQPTMGGDT*VLWLWD Trigger: GTCCCAGAGCCAGAGCACCCAGGTGTCCCCACCCAT...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGTCAACCGCCGGCGAGTaGTGTTGCACAGAGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: TKEETGQQASDHVSVQPTSTAGE*CCTEDT Trigger: GGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGA...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| 3UTR CAA 72 bp | CCTGGAAGTTTCAGTCGCAGCAAGGGGGTTCTGACGTaGCAGCTTTCCCAATGCACACCTGAACCCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGSFSRSKGVLT*QLSQCTPEPHP Trigger: TGGGTGGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCTGCGACTGAAACTTCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGTTGCGGTTGTGCCGCTaGATCTTCTCCTTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMLRLCR*IFSFFS Trigger: AGAGAAAAAGGAGAAGATTCAGCGGCACAACCGCAA...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | TGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTTGTCCCACCAGCGCTGCTaGTGGCAATGGGTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WPAGWSLKRMTEKQTQPLSHQRC*WQWVGT Trigger: TGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGA...CAAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTCAGGCCTGCTTGTTCTTAAGTTaGCTTAGTCTTTCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGTSILRTWAQEPRAQACLFLS*LSLSFL Trigger: CAAGAAGGAAAGACTAAGCCAACTTAAGAACAAGCA...GGCCTGAGCTCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGGGGGTTCTGACGTTGCAGCTTTCCCAATGCACACCTGAACCCCACCCATTCTCCTTTTTCTCTTaGTGCCGCTGTGCTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKGVLTLQLSQCTPEPHPFSFFS*CRCARL Trigger: CAGCCGAGCACAGCGGCACCAAGAGAAAAAGGAGAA...TGGGTGGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGCCTGAGTGTGTGCAGTaGTTGCAACTGATCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMPECVQ*LQLIQI Trigger: AATCTGGATCAGTTGCAACCACTGCACACACTCAGG...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AACCACAGTGTGAGTCAACAGAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGGGTCCACAAATTCCATaGACTCCTCGAGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NHSVSQQKPGRGRLLKDLGPQIP*TPRGLL Trigger: GAGCAGACCTCGAGGAGTCCATGGAATTTGTGGACC...CAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTCTGTTGACTCACACTGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | GAGACTCTGCACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAGCTTTTTGGGAAGATTaGTGTCAAGTATGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETLHPGTSILRTWAQEPRAFWED*CQVCET Trigger: TGTCTCACATACTTGACATCAATCTTCCCAAAAAGC...TCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTGCAGAGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGGGGCCTCAGCAAGCTTaGTCACCATGCTTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKEETGQQASDHVSVQPTGPQQA*SPCLRS Trigger: TGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCC...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | AGCAAGGGGGTTCTGACGTTGCAGCTTTCCCAATGCACACCTGAACCCCACCCATCAGTTTCTGCTTGCTaGGGTTTTCGCCACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKGVLTLQLSQCTPEPHPSVSAC*GFRHRT Trigger: AGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGA...TGGGTGGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGAGTCCAGTGTAAGCTTTaGACCAAGAGGTCACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGVQCKL*TKRSPR Trigger: CCTCGGTGACCTCTTGGTTCAAAGCTTACACTGGAC...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | TGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTTGATCTCCACTCGCGTCTaGTTCTCCAGCAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPAGWSLKRMTEKQTQPLISTRV*FSSNSR Trigger: CCTGGAGTTGCTGGAGAATCAGACGCGAGTGGAGAT...CAAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | TATCTAGAGCTTGGGAACGTGGGGAACCTGGGCAGGATGAAGTCCTTCCTACACCAAGCTTGCTCACCATaGTTGAGGTCATGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLELGNVGNLGRMKSFLHQACSP*LRSWHC Trigger: ACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTG...GTGTAGGAAGGACTTCATCCTGCCCAGGTTCCCCACGTTCCCAAGCTCTAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGACAAGCTTGCTCACCATaGTTGAGGTCATGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGQACSP*LRSWHC Trigger: ACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTG...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | CTACACAGACAAGGTTATGAGAGTGCAGTGGGAAAGACTCTGAGACACAAAATCCACCAGCGCTGCTGCTaGCAATGGGTGGGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: LHRQGYESAVGKTLRHKIHQRCC*QWVGTP Trigger: AGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTG...GATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGTCTTTTCCTTGTTCTTaGGGAGACCTTCAGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMSFPCS*GDLQNF Trigger: AAAATTCTGAAGGTCTCCTCAAGAACAAGGAAAAGA...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | TGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTTGGTCCAGTGTAAGCTTTaGACCAAGAGGTCACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPAGWSLKRMTEKQTQPLVQCKL*TKRSPR Trigger: CCTCGGTGACCTCTTGGTTCAAAGCTTACACTGGAC...CAAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AACCACAGTGTGAGTCAACAGAAGCCAGGGCGTGGCAGACTGCTGAAGGACCTGTCCATGTCAGGTCCTTaGGTTGTTTTCTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHSVSQQKPGRGRLLKDLSMSGP*VVFFSS Trigger: AGAAGAGAAGAAAACAACCCAAGGACCTGACATGGA...CAGGTCCTTCAGCAGTCTGCCACGCCCTGGCTTCTGTTGACTCACACTGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGCCTGAGTGTGTGCAGTaGTTGCAACTGATCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TKEETGQQASDHVSVQPTPECVQ*LQLIQI Trigger: AATCTGGATCAGTTGCAACCACTGCACACACTCAGG...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGAATTTTCCATCTCAACTaGTCTGTAAGCCGCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGIFHLN*SVSRFP Trigger: AGGAAAGCGGCTTACAGATCAGTTGAGATGGAAAAT...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGGGGGTTCTGACGTTGCAGCTTTCCCAATGCACACCTGAACCCCACCCACCTTTACATATTGTTTaGTTCAGCTGTTCAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKGVLTLQLSQCTPEPHPPLHIV*FSCSIL Trigger: GAGGATTGAACAGCTGAAGCAAACAATATGTAAAGG...TGGGTGGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | CTACACAGACAAGGTTATGAGAGTGCAGTGGGAAAGACTCTGAGACACAAAATCACAGAATCGGGGGCTTaGCAGGTTCTCCCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHRQGYESAVGKTLRHKITESGA*QVLPVC Trigger: ACAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGT...GATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCTGGGTGCTCTGGCTCTaGGACACTTCCACCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCWVLWL*DTSTGW Trigger: CCAGCCGGTGGAAGTGTCCCAGAGCCAGAGCACCCA...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGACCCCAGGGACAAGAAGACCTCAGGAACAAGAAGGAAGAGTTCCCTGGACCTTTACATATTGTTTaGTTCAGCTGTTCAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRPQGQEDLRNKKEEFPGPLHIV*FSCSIL Trigger: GAGGATTGAACAGCTGAAGCAAACAATATGTAAAGG...TCCAGGGAACTCTTCCTTCTTGTTCCTGAGGTCTTCTTGTCCCTGGGGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACTCCCACCAGCGCTGCTaGTGGCAATGGGTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYSHQRC*WQWVGT Trigger: TGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGA...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGGTTCAATCCTCATCTTaGATGACATTATTTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TKEETGQQASDHVSVQPTVQSSS*MTLFSI Trigger: GATGGAAAATAATGTCATGCAAGATGAGGATTGAAC...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACTCAACCGCCGGCGAGTaGTGTTGCACAGAGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYSTAGE*CCTEDT Trigger: GGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGA...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTAGACACCTGGGTGCTCTaGCTCTGGGACACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CGASECLLVLPCSKKSFLDTWVL*LWDTST Trigger: GGTGGAAGTGTCCCAGAGCCAGAGCACCCAGGTGTC...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCGGACTCCTCGAGGTCTaGTCGAACTTCAAAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCGLLEV*SNFKGS Trigger: GGACCCTTTGAAGTTCGAGCAGACCTCGAGGAGTCC...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR TCA 90 bp | CTACACAGACAAGGTTATGAGAGTGCAGTGGGAAAGACTCTGAGACACAAAATCATTTTCCATCTCAACTaGTCTGTAAGCCGCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHRQGYESAVGKTLRHKIIFHLN*SVSRFP Trigger: AGGAAAGCGGCTTACAGATCAGTTGAGATGGAAAAT...GATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
||
| CDS-3UTR TCA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCCTTGCTCACCATGCTTaGGGTCATGGCACTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCLAHHA*GHGTVS Trigger: ACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAG...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCAGTGCATCAGGTTCCTaGGTGTGTGCAGTGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCSASGS*VCAVVA Trigger: TGCAACCACTGCACACACTCAGGAACCTGATGCACT...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACATCTCCACTCGCGTCTaGTTCTCCAGCAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYISTRV*FSSNSR Trigger: CCTGGAGTTGCTGGAGAATCAGACGCGAGTGGAGAT...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACGGGCCTCAGCAAGCTTaGTCACCATGCTTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYGPQQA*SPCLRS Trigger: TGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCC...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTAGGTCCACAAATTCCATaGACTCCTCGAGGTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CGASECLLVLPCSKKSFLGPQIP*TPRGLL Trigger: GAGCAGACCTCGAGGAGTCCATGGAATTTGTGGACC...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CCA 90 bp | CTACACAGACAAGGTTATGAGAGTGCAGTGGGAAAGACTCTGAGACACAAAATCTGCTTGTTCTTAAGTTaGCTTAGTCTTTCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHRQGYESAVGKTLRHKICLFLS*LSLSFL Trigger: CAAGAAGGAAAGACTAAGCCAACTTAAGAACAAGCA...GATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR GCA 90 bp | CTACACAGACAAGGTTATGAGAGTGCAGTGGGAAAGACTCTGAGACACAAAATCGTTCAATCCTCATCTTaGATGACATTATTTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LHRQGYESAVGKTLRHKIVQSSS*MTLFSI Trigger: GATGGAAAATAATGTCATGCAAGATGAGGATTGAAC...GATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | TGTGGTGCCTCTGAGTGTCTATTAGTATTACCTTGTTCCAAGAAATCATTTTTAGCTTTTTGGGAAGATTaGTGTCAAGTATGTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: CGASECLLVLPCSKKSFLAFWED*CQVCET Trigger: TGTCTCACATACTTGACATCAATCTTCCCAAAAAGC...TAAAAATGATTTCTTGGAACAAGGTAATACTAATAGACACTCAGAGGCACCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGAGTGTAGGAACCAAACAGTGGTTGAAATGTGTATTTAAGACTATTTACTCTTTTCCTTGTTCTTaGGGAGACCTTCAGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: AKSVGTKQWLKCVFKTIYSFPCS*GDLQNF Trigger: AAAATTCTGAAGGTCTCCTCAAGAACAAGGAAAAGA...GTAAATAGTCTTAAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 90 bp | AGGTCACCGAGGCCGCAGCGGAGGAGATCATCCCACCAGCGCTGCTaGTGGCAATGGGTGGGGACACCTGGGTGCTCTGGCTCTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: RSPRPQRRRSSHQRC*WQWVGTPGCSGSGT Trigger: TGTCCCAGAGCCAGAGCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGATGATCTCCTCCGCTGCGGCCTCGGTGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | AGGCCGCAGCGGAGGAGATCATCCCACCAGCGCTGCTGCTGGCAATaGGTGGGGACACCTGGGTGCTCTGGCTCTGGGACACTTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RPQRRRSSHQRCCWQ*VGTPGCSGSGTLPP Trigger: CGGTGGAAGTGTCCCAGAGCCAGAGCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGATGATCTCCTCCGCTGCGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | TCACCGAGGCCGCAGCGGAGGAGATCATCCCACCAGCGCTGCTGCTaGCAATGGGTGGGGACACCTGGGTGCTCTGGCTCTGGGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: SPRPQRRRSSHQRCC*QWVGTPGCSGSGTL Trigger: AAGTGTCCCAGAGCCAGAGCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGATGATCTCCTCCGCTGCGGCCTCGGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 90 bp | CGCTCTGGACGCACTTGGCGCAAGTCAACCGCCGGCGAGTGGTGTTaGACAGAGGACACCGCTCAACAGCCACGTAAAGGCCCTCGGCGT | + |
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Preference number: 5 (lower is better) Translates to: RSGRTWRKSTAGEWC*TEDTAQQPRKGPRR Trigger: ACGCCGAGGGCCTTTACGTGGCTGTTGAGCGGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGACTTGCGCCAAGTGCGTCCAGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 ENSMUST00000228784.2 |
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| CDS CCA 90 bp | GGTGGGGACACCTGGGTGCTCTGGCTCTGGGACACTTCCACCGGCTaGGAAGGGATGTCACAGAATCGGGGGCTTGGCAGGTTCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GGDTWVLWLWDTSTG*EGMSQNRGLGRFSQ Trigger: CTGGGAGAACCTGCCAAGCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTGGAAGTGTCCCAGAGCCAGAGCACCCAGGTGTCCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | GGTCGCGGCCGTCGAAATAGACGAAATCACCGCTCTGGACGCACTTaGCGCAAGTCAACCGCCGGCGAGTGGTGTTGCACAGAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRRNRRNHRSGRT*RKSTAGEWCCTEDT Trigger: GGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGACTTGCGCCAAGTGCGTCCAGAGCGGTGATTTCGTCTATTTCGACGGCCGCGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 ENSMUST00000228784.2 |
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| CDS CCA 90 bp | AATCACCGCTCTGGACGCACTTGGCGCAAGTCAACCGCCGGCGAGTaGTGTTGCACAGAGGACACCGCTCAACAGCCACGTAAAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NHRSGRTWRKSTAGE*CCTEDTAQQPRKGP Trigger: AGGGCCTTTACGTGGCTGTTGAGCGGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGACTTGCGCCAAGTGCGTCCAGAGCGGTGATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 ENSMUST00000228784.2 |
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| CDS CCA 90 bp | GGACACTTCCACCGGCTGGGAAGGGATGTCACAGAATCGGGGGCTTaGCAGGTTCTCCCAGTCTGTGCCCAGGTCAGTCTCCTCATCGCT | + |
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Preference number: 5 (lower is better) Translates to: GHFHRLGRDVTESGA*QVLPVCAQVSLLIA Trigger: AGCGATGAGGAGACTGACCTGGGCACAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTGGAAGTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGCACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGATTCCAGAGAGGTAAGTaGTCCTCCGGGCCTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETLHPGTSILRTWAQEPRFQRGK*SSGPQQ Trigger: TTGCTGAGGCCCGGAGGACAACTTACCTCTCTGGAA...TCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTGCAGAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGCACAGAATCGGGGGCTaGGCAGGTTCTCCCAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMHRIGG*AGSPSL Trigger: CAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGTG...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGCACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGACGTGTCAGTTTCTGCTaGCTGAGGTTTTCGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ETLHPGTSILRTWAQEPRRVSFC*LRFSPQ Trigger: CTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACG...TCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTGCAGAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGCACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGAATGCTGGTGTCACCATaGTGGTCATCACAGACCCAT | + |
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Preference number: 5 (lower is better) Translates to: ETLHPGTSILRTWAQEPRMLVSP*WSSQTH Trigger: ATGGGTCTGTGATGACCACAATGGTGACACCAGCAT...TCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTGCAGAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGCACCCAGGAACCAGCATACTGAGGACCTGGGCCCAGGAGCCCCGACCACAGAACTCGCTGTaGCACAGCTTTTTGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: ETLHPGTSILRTWAQEPRPQNSL*HSFLGR Trigger: TCTTCCCAAAAAGCTGTGCAACAGCGAGTTCTGTGG...TCGGGGCTCCTGGGCCCAGGTCCTCAGTATGCTGGTTCCTGGGTGCAGAGTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | TTGTCCTCCGGGCCTCAGCAAGCTTGCTCACCATGCTTGAGGTCATaGCACTGTCAGTCTCTGAAGACACGTCTGCAGGGTCTCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSSGPQQACSPCLRS*HCQSLKTRLQGLSQ Trigger: CTGGGAGAGACCCTGCAGACGTGTCTTCAGAGACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCCGGAGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | ACCTTCGAAGCCGCGCCAACCGCTCATAGTGACTCTTCAAGTCAATaGTCTTCTTCTCCACCAGGTCCCCAAGCTTGCGGTTGTGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: TFEAAPTAHSDSSSQ*SSSPPGPQACGCAA Trigger: AGCGGCACAACCGCAAGCTTGGGGACCTGGTGGAGAAGAAGACCATTGACTTGAAGAGTCACTATGAGCGGTTGGCGCGGCTTCGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGGGGGTTCTGACGTTGCAGCTTTCCCAATGCACACCTGAACCCCACCCAGCTTGCTCACCATGCTaGAGGTCATGGCACTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SKGVLTLQLSQCTPEPHPACSPC*RSWHCQ Trigger: CTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGC...TGGGTGGGGTTCAGGTGTGCATTGGGAAAGCTGCAACGTCAGAACCCCCTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGCCACAGAACTCGCTGTaGCACAGCTTTTTGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMPQNSL*HSFLGR Trigger: TCTTCCCAAAAAGCTGTGCAACAGCGAGTTCTGTGG...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 90 bp | CAGAGAGGTAAGTTGTCCTCCGGGCCTCAGCAAGCTTGCTCACCATaGTTGAGGTCATGGCACTGTCAGTCTCTGAAGACACGTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QRGKLSSGPQQACSP*LRSWHCQSLKTRLQ Trigger: CTGCAGACGTGTCTTCAGAGACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCCGGAGGACAACTTACCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | CACTCGCGTCTGATTCTCCAGCAACTCCAGGGTCCACAAATTCCATaGACTCCTCGAGGTCTGCTCGAACTTCAAAGGGTCCTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSRLILQQLQGPQIP*TPRGLLELQRVLTC Trigger: GCAGGTCAGGACCCTTTGAAGTTCGAGCAGACCTCGAGGAGTCCATGGAATTTGTGGACCCTGGAGTTGCTGGAGAATCAGACGCGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 90 bp | CAGGTCAGTCTCCTCATCGCTTACACGCTCATCTCCACTCGCGTCTaGTTCTCCAGCAACTCCAGGGTCCACAAATTCCATGGACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVSLLIAYTLISTRV*FSSNSRVHKFHGLL Trigger: GAGGAGTCCATGGAATTTGTGGACCCTGGAGTTGCTGGAGAATCAGACGCGAGTGGAGATGAGCGTGTAAGCGATGAGGAGACTGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 90 bp | CCCATCTTCCAGAGAGGTAAGTTGTCCTCCGGGCCTCAGCAAGCTTaGTCACCATGCTTGAGGTCATGGCACTGTCAGTCTCTGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PIFQRGKLSSGPQQA*SPCLRSWHCQSLKT Trigger: TGTCTTCAGAGACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCCGGAGGACAACTTACCTCTCTGGAAGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGGCTTGCTCACCATGCTaGAGGTCATGGCACTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TKEETGQQASDHVSVQPTACSPC*RSWHCQ Trigger: CTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGC...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 90 bp | GCTATCTGTAACTTCAAAGGCTCTGAGGCAGGGATGTTCTTGAACTaGCAGGGAAGCCAGGAAACCATTTTCTCCCTCTCCCGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AICNFKGSEAGMFLN*QGSQETIFSLSRSR Trigger: CCGCGACCGGGAGAGGGAGAAAATGGTTTCCTGGCTTCCCTGTCAGTTCAAGAACATCCCTGCCTCAGAGCCTTTGAAGTTACAGATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228784.2 |
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| CDS GCA 90 bp | GACTCTTCAAGTCAATGGTCTTCTTCTCCACCAGGTCCCCAAGCTTaGGGTTGTGCCGCTGAATCTTCTCCTTTTTCTCTTGGTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DSSSQWSSSPPGPQA*GCAAESSPFSLGAA Trigger: AGCGGCACCAAGAGAAAAAGGAGAAGATTCAGCGGCACAACCGCAAGCTTGGGGACCTGGTGGAGAAGAAGACCATTGACTTGAAGAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGATGCTGGTGTCACCATaGTGGTCATCACAGACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TKEETGQQASDHVSVQPTMLVSP*WSSQTH Trigger: ATGGGTCTGTGATGACCACAATGGTGACACCAGCAT...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | TCCCGGATGAGGCCAAACTGCTGCTGGCCTGCTGGCTGGTCTCTCAAGAGGATGTTCTTTTCCTTGTTCTaGAGGAGACCTTCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SRMRPNCCWPAGWSLKRMFFSLF*RRPSEF Trigger: AAATTCTGAAGGTCTCCTCAAGAACAAGGAAAAGAA...CATCCTCTTGAGAGACCAGCCAGCAGGCCAGCAGCAGTTTGGCCTCATCCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 90 bp | TGTTTGCGTTCAGTTTCCTCACTGCGCGTGTCAGTTTCTGCTTGCTaGGGTTTTCGCCACAGAACTCGCTGTTGCACAGCTTTTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CLRSVSSLRVSVSAC*GFRHRTRCCTAFWE Trigger: TTCCCAAAAAGCTGTGCAACAGCGAGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 90 bp | AGAGCGCGGGCTGACCAAGTGCATCAGGTTCCTGAGTGTGTGCAGTaGTTGCAACTGATCCAGATTTACATGCTGAGAAGAACAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RARADQVHQVPECVQ*LQLIQIYMLRRTKV Trigger: TACCTTTGTTCTTCTCAGCATGTAAATCTGGATCAGTTGCAACCACTGCACACACTCAGGAACCTGATGCACTTGGTCAGCCCGCGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGGAAGAAACCGGACAGCAAGCGAGTGACCACGTAAGTGTTCAGCCAACGTTCTGGTTCTTTTCCTaGTTCTTGAGGAGACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKEETGQQASDHVSVQPTFWFFS*FLRRPS Trigger: TGAAGGTCTCCTCAAGAACAAGGAAAAGAACCAGAA...CGTTGGCTGAACACTTACGTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | CTACACAGACAAGGTTATGAGAGTGCAGTGGGAAAGACTCTGAGACACAAAATCCTTCTCCTTTTTCTCTaGGTGCCGCTGTGCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHRQGYESAVGKTLRHKILLLFL*VPLCSA Trigger: AGCCGAGCACAGCGGCACCAAGAGAAAAAGGAGAAG...GATTTTGTGTCTCAGAGTCTTTCCCACTGCACTCTCATAACCTTGTCTGTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 90 bp | CTGAGAAGAACAAAGGTAAAGGATGTTTGCGTTCAGTTTCCTCACTaGGCGTGTCAGTTTCTGCTTGCTGAGGTTTTCGCCACAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRTKVKDVCVQFPH*ACQFLLAEVFATEL Trigger: GAGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGCAAACATCCTTTACCTTTGTTCTTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCCACAGAATCGGGGGCTaGGCAGGTTCTCCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCHRIGG*AGSPSL Trigger: CAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGTG...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTGCTGGCTGGTCTCTCAAGAGGATGACAGAAAAACAAACTCAGCCTTTGTTCTTTTCCTTGTTCTaGAGGAGACCTTCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: WPAGWSLKRMTEKQTQPLFFSLF*RRPSEF Trigger: AAATTCTGAAGGTCTCCTCAAGAACAAGGAAAAGAA...CAAAGGCTGAGTTTGTTTTTCTGTCATCCTCTTGAGAGACCAGCCAGCAGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCTTCCAGAGAGGTAAGTaGTCCTCCGGGCCTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCFQRGK*SSGPQQ Trigger: TTGCTGAGGCCCGGAGGACAACTTACCTCTCTGGAA...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCCGTGTCAGTTTCTGCTaGCTGAGGTTTTCGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCRVSFC*LRFSPQ Trigger: CTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACG...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS-3UTR CAA 90 bp | AAACAGTGGTTGAAATGTGTATTTAAGACTATTTACAACAGGTGGATCCAGTGCTTCTGGTTCTTTTCCTaGTTCTTGAGGAGACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KQWLKCVFKTIYNRWIQCFWFFS*FLRRPS Trigger: TGAAGGTCTCCTCAAGAACAAGGAAAAGAACCAGAA...GCACTGGATCCACCTGTTGTAAATAGTCTTAAATACACATTTCAACCACTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 72 bp | CCGCAGCGGAGGAGATCATCCCACCAGCGCTGCTGCTaGCAATGGGTGGGGACACCTGGGTGCTCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PQRRRSSHQRCC*QWVGTPGCSGS Trigger: AGAGCCAGAGCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGATGATCTCCTCCGCTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 72 bp | ACCTGGGTGCTCTGGCTCTGGGACACTTCCACCGGCTaGGAAGGGATGTCACAGAATCGGGGGCTTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TWVLWLWDTSTG*EGMSQNRGLGR Trigger: CCTGCCAAGCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTGGAAGTGTCCCAGAGCCAGAGCACCCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 90 bp | GGGACACTTCCACCGGCTGGGAAGGGATGTCACAGAATCGGGGGCTaGGCAGGTTCTCCCAGTCTGTGCCCAGGTCAGTCTCCTCATCGC | + |
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Preference number: 6 (lower is better) Translates to: GTLPPAGKGCHRIGG*AGSPSLCPGQSPHR Trigger: GCGATGAGGAGACTGACCTGGGCACAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTGGAAGTGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 72 bp | CGCACTTGGCGCAAGTCAACCGCCGGCGAGTGGTGTTaGACAGAGGACACCGCTCAACAGCCACGTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RTWRKSTAGEWC*TEDTAQQPRKG Trigger: GCCTTTACGTGGCTGTTGAGCGGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGACTTGCGCCAAGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 ENSMUST00000228784.2 |
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| CDS CCA 72 bp | TCTGGACGCACTTGGCGCAAGTCAACCGCCGGCGAGTaGTGTTGCACAGAGGACACCGCTCAACAGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: SGRTWRKSTAGE*CCTEDTAQQPR Trigger: ACGTGGCTGTTGAGCGGTGTCCTCTGTGCAACACCACTCGCCGGCGGTTGACTTGCGCCAAGTGCGTCCAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 ENSMUST00000228784.2 |
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| CDS CCA 72 bp | CACCGGCTGGGAAGGGATGTCACAGAATCGGGGGCTTaGCAGGTTCTCCCAGTCTGTGCCCAGGTCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HRLGRDVTESGA*QVLPVCAQVSL Trigger: GAGACTGACCTGGGCACAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 72 bp | CCACCGGCTGGGAAGGGATGTCACAGAATCGGGGGCTaGGCAGGTTCTCCCAGTCTGTGCCCAGGTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PPAGKGCHRIGG*AGSPSLCPGQS Trigger: AGACTGACCTGGGCACAGACTGGGAGAACCTGCCAAGCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 72 bp | CGTCGAAATAGACGAAATCACCGCTCTGGACGCACTTaGCGCAAGTCAACCGCCGGCGAGTGGTGTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: RRNRRNHRSGRT*RKSTAGEWCCT Trigger: TGTGCAACACCACTCGCCGGCGGTTGACTTGCGCCAAGTGCGTCCAGAGCGGTGATTTCGTCTATTTCGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 ENSMUST00000228784.2 |
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| CDS CCA 72 bp | GCCGCGCCAACCGCTCATAGTGACTCTTCAAGTCAATaGTCTTCTTCTCCACCAGGTCCCCAAGCTTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: AAPTAHSDSSSQ*SSSPPGPQACG Trigger: ACCGCAAGCTTGGGGACCTGGTGGAGAAGAAGACCATTGACTTGAAGAGTCACTATGAGCGGTTGGCGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 72 bp | GGGCCTCAGCAAGCTTGCTCACCATGCTTGAGGTCATaGCACTGTCAGTCTCTGAAGACACGTCTGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GPQQACSPCLRS*HCQSLKTRLQG Trigger: ACCCTGCAGACGTGTCTTCAGAGACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 72 bp | TTCTCCACCAGGTCCCCAAGCTTGCGGTTGTGCCGCTaGATCTTCTCCTTTTTCTCTTGGTGCCGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSTRSPSLRLCR*IFSFFSWCRCA Trigger: AGCACAGCGGCACCAAGAGAAAAAGGAGAAGATTCAGCGGCACAACCGCAAGCTTGGGGACCTGGTGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 72 bp | CAGAGAGGTAAGTTGTCCTCCGGGCCTCAGCAAGCTTaGTCACCATGCTTGAGGTCATGGCACTGTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QRGKLSSGPQQA*SPCLRSWHCQS Trigger: AGACTGACAGTGCCATGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCCGGAGGACAACTTACCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 72 bp | TGTGGTCATCACAGACCCATCTTCCAGAGAGGTAAGTaGTCCTCCGGGCCTCAGCAAGCTTGCTCACCATGC | + |
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Preference number: 6 (lower is better) Translates to: CGHHRPIFQRGK*SSGPQQACSPC Trigger: GCATGGTGAGCAAGCTTGCTGAGGCCCGGAGGACAACTTACCTCTCTGGAAGATGGGTCTGTGATGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 72 bp | GCGTTCAGTTTCCTCACTGCGCGTGTCAGTTTCTGCTaGCTGAGGTTTTCGCCACAGAACTCGCTGTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: AFSFLTARVSFC*LRFSPQNSLLH Trigger: GTGCAACAGCGAGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 90 bp | TGTCACCATTGTGGTCATCACAGACCCATCTTCCAGAGAGGTAAGTaGTCCTCCGGGCCTCAGCAAGCTTGCTCACCATGCTTGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: CHHCGHHRPIFQRGK*SSGPQQACSPCLRS Trigger: TGACCTCAAGCATGGTGAGCAAGCTTGCTGAGGCCCGGAGGACAACTTACCTCTCTGGAAGATGGGTCTGTGATGACCACAATGGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 72 bp | TCAGTTTCCTCACTGCGCGTGTCAGTTTCTGCTTGCTaGGGTTTTCGCCACAGAACTCGCTGTTGCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SVSSLRVSVSAC*GFRHRTRCCTA Trigger: AGCTGTGCAACAGCGAGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 72 bp | CTCCTCATCGCTTACACGCTCATCTCCACTCGCGTCTaGTTCTCCAGCAACTCCAGGGTCCACAAATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLIAYTLISTRV*FSSNSRVHKFH Trigger: ATGGAATTTGTGGACCCTGGAGTTGCTGGAGAATCAGACGCGAGTGGAGATGAGCGTGTAAGCGATGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 72 bp | CTGATTCTCCAGCAACTCCAGGGTCCACAAATTCCATaGACTCCTCGAGGTCTGCTCGAACTTCAAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LILQQLQGPQIP*TPRGLLELQRV Trigger: GACCCTTTGAAGTTCGAGCAGACCTCGAGGAGTCCATGGAATTTGTGGACCCTGGAGTTGCTGGAGAATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS GCA 72 bp | TTTGCGTTCAGTTTCCTCACTGCGCGTGTCAGTTTCTaGTTGCTGAGGTTTTCGCCACAGAACTCGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FAFSFLTARVSF*LLRFSPQNSLL Trigger: CAACAGCGAGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 90 bp | AGGATGTTTGCGTTCAGTTTCCTCACTGCGCGTGTCAGTTTCTGCTaGCTGAGGTTTTCGCCACAGAACTCGCTGTTGCACAGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RMFAFSFLTARVSFC*LRFSPQNSLLHSFL Trigger: CAAAAAGCTGTGCAACAGCGAGTTCTGTGGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGCAAACATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CAA 90 bp | GCGCGGGCTGACCAAGTGCATCAGGTTCCTGAGTGTGTGCAGTGGTaGCAACTGATCCAGATTTACATGCTGAGAAGAACAAAGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: ARADQVHQVPECVQW*QLIQIYMLRRTKVK Trigger: CTTTACCTTTGTTCTTCTCAGCATGTAAATCTGGATCAGTTGCAACCACTGCACACACTCAGGAACCTGATGCACTTGGTCAGCCCGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 72 bp | AACTTCAAAGGCTCTGAGGCAGGGATGTTCTTGAACTaGCAGGGAAGCCAGGAAACCATTTTCTCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: NFKGSEAGMFLN*QGSQETIFSLS Trigger: GGAGAGGGAGAAAATGGTTTCCTGGCTTCCCTGTCAGTTCAAGAACATCCCTGCCTCAGAGCCTTTGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228784.2 |
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| CDS GCA 72 bp | AGTCAATGGTCTTCTTCTCCACCAGGTCCCCAAGCTTaGGGTTGTGCCGCTGAATCTTCTCCTTTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SQWSSSPPGPQA*GCAAESSPFSL Trigger: AAGAGAAAAAGGAGAAGATTCAGCGGCACAACCGCAAGCTTGGGGACCTGGTGGAGAAGAAGACCATTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS TCA 72 bp | TCTGTAACTTCAAAGGCTCTGAGGCAGGGATGTTCTTaGACTGACAGGGAAGCCAGGAAACCATTTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SVTSKALRQGCS*TDREARKPFSP Trigger: GGGAGAAAATGGTTTCCTGGCTTCCCTGTCAGTTCAAGAACATCCCTGCCTCAGAGCCTTTGAAGTTACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228784.2 |
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| CDS GCA 72 bp | ACAAAGGTAAAGGATGTTTGCGTTCAGTTTCCTCACTaGGCGTGTCAGTTTCTGCTTGCTGAGGTTTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: TKVKDVCVQFPH*ACQFLLAEVFA Trigger: GGCGAAAACCTCAGCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGCAAACATCCTTTACCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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| CDS CCA 72 bp | GCTGACCAAGTGCATCAGGTTCCTGAGTGTGTGCAGTaGTTGCAACTGATCCAGATTTACATGCTGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: ADQVHQVPECVQ*LQLIQIYMLRR Trigger: TCTTCTCAGCATGTAAATCTGGATCAGTTGCAACCACTGCACACACTCAGGAACCTGATGCACTTGGTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042988.7 ENSMUST00000226299.2 |
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