Pregenerated sensors for ATG13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027244Ensembl transcript IDs: ENSMUST00000028678.9, ENSMUST00000076803.12
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGCCCCTGACCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTaGGCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: CAPDPKAAMAFGHHR*AHFSVAAKHAQGKG Trigger: GCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGGTCAGGGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR TCA 90 bp | AGAACAGATGACACCCTTTGTGAAGCAGCTGAGGACAGTCCTTGCTaGGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RTDDTLCEAAEDSPC*GSVTASFQLDGPSP Trigger: AGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCCTCAGCTGCTTCACAAAGGGTGTCATCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR TCA 90 bp | TACACGCAGCCTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTaGTCTCTCCTTAGATGTGACAGGAGTATCCTCACAGGTACTGAG | + |
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Preference number: 1 (lower is better) Translates to: YTQPEGAAWPLPGHS*SLLRCDRSILTGTE Trigger: CTCAGTACCTGTGAGGATACTCCTGTCACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAGGCTGCGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR CCA 90 bp | CAGCTGCTGCCAGTGAGGATCCAGGGACAGAGGAACAGAGCAGGCTaGCAGAGGCACTTGACTCACTCAAGCAAACCTGAAGGTTTACGT | + |
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Preference number: 1 (lower is better) Translates to: QLLPVRIQGQRNRAG*QRHLTHSSKPEGLR Trigger: ACGTAAACCTTCAGGTTTGCTTGAGTGAGTCAAGTGCCTCTGCCAGCCTGCTCTGTTCCTCTGTCCCTGGATCCTCACTGGCAGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR CCA 90 bp | AGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTaGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACATGCA | + |
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Preference number: 1 (lower is better) Translates to: RLQWHLATTAGHISL*QQSMHRGKAPVLHA Trigger: TGCATGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 90 bp | CTCAGCTTCCCTGGCCTCCTTCCTAATAATCTAGGACATAAAGGCTaGTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAACCCGTG | + |
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Preference number: 1 (lower is better) Translates to: LSFPGLLPNNLGHKG*CLQRPLAEPCKEPV Trigger: CACGGGTTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGGAAGGAGGCCAGGGAAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 90 bp | TCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACATaGAGATTTCTAACAAGCAGTTGCGAGCCACCTGCTCCAATGCGT | + |
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Preference number: 1 (lower is better) Translates to: SVAAKHAQGKGSSVT*RFLTSSCEPPAPMR Trigger: ACGCATTGGAGCAGGTGGCTCGCAACTGCTTGTTAGAAATCTGCATGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACTTGAGCAGCAGGACACACAGTGCTCCTGGGGCACCGTGTGCAACACAGGGTACGCAGCATGCTaGGGAAGCCTAACGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QELEQQDTQCSWGTVCNTGYAAC*GSLTPA Trigger: TGCAGGCGTTAGGCTTCCCCAGCATGCTGCGTACCC...TGTGTTGCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTGCTCAAGTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCCTCCTTCGCCCGGGTTaGTCTCCTTGGTTTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGLLRPG*SPWFSS Trigger: GGAAGAAAACCAAGGAGACCAACCCGGGCGAAGGAG...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACAGGCTAGGAAGCAGCTaGGGAAGAGGAGGTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNRLGSS*GRGGSL Trigger: CAGAGAACCTCCTCTTCCTCAGCTGCTTCCTAGCCT...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCCAGCAGGACACACAGTaGTCCTGGGGCACCGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPQQDTQ*SWGTVC Trigger: GCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTG...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACACAGCAGGACACACAGTaGTCCTGGGGCACCGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTQQDTQ*SWGTVC Trigger: GCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTG...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACAGGGGAGAAAGAAGGGTaGGAGAGTGGGGTGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTGEKEG*ESGVVQ Trigger: CTGGACCACCCCACTCTCCCACCCTTCTTTCTCCCC...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAAAGGCTAGGAAGCAGCTaGGGAAGAGGAGGTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LGHKGCCLQRPLAEPCKERLGSS*GRGGSL Trigger: CAGAGAACCTCCTCTTCCTCAGCTGCTTCCTAGCCT...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAACCACGCAGCAGCGATTaGGGGAAAACGAGGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LGHKGCCLQRPLAEPCKEPRSSD*GKTRKE Trigger: TTCTTTCCTCGTTTTCCCTCAATCGCTGCTGCGTGG...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTACAGACTCCTGGGGCACCGTGTaGAACACAACTCTGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: WFLEGEPIQLVKPGPRTDSWGTV*NTTLRS Trigger: ACTCCTCAGAGTTGTGTTGCACACGGTGCCCCAGGA...GTCTGTACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGTGGCAGCAAAGCATaGACAGGGGAAAGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPCGSKA*TGERLQ Trigger: CTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACA...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTATCCTCACAGGTACTGAGCAATCTTCACGGGAGGCCGACATCCCAGAAGTGGGAGAAAGGGAGTaGATGAAAACGGAAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RSILTGTEQSSREADIPEVGERE*MKTEGR Trigger: CCTTCCTTCCGTTTTCATTCACTCCCTTTCTCCCAC...TTCTGGGATGTCGGCCTCCCGTGAAGATTGCTCAGTACCTGTGAGGATACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACAGTGGGAGAAAGGGAGTaGATGAAAACGGAAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTVGERE*MKTEGR Trigger: CCTTCCTTCCGTTTTCATTCACTCCCTTTCTCCCAC...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGTGCAACACAACTCTaGGGAGTCACCACACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPCATQL*GVTTLN Trigger: GTTCAGTGTGGTGACTCCTCAGAGTTGTGTTGCACA...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR TCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACATGTGCAACACAACTCTaGGGAGTCACCACACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTCATQL*GVTTLN Trigger: GTTCAGTGTGGTGACTCCTCAGAGTTGTGTTGCACA...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAAGCAGCCTTTGGGAAATaGTGGCTAGCTTTGGAATAC | + |
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Preference number: 2 (lower is better) Translates to: LGHKGCCLQRPLAEPCKEAAFGK*WLALEY Trigger: GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGC...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACATTTTCTTCCTCTTTCTaGCTTGCCCAGCGTTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTFSSSF*LAQRSS Trigger: GCTAGAACGCTGGGCAAGGCAGAAAGAGGAAGAAAA...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTACAGACTTTTCTTCCTCTTTCTaGCTTGCCCAGCGTTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: WFLEGEPIQLVKPGPRTDFSSSF*LAQRSS Trigger: GCTAGAACGCTGGGCAAGGCAGAAAGAGGAAGAAAA...GTCTGTACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTGCAGCCTTTGGGAAATaGTGGCTAGCTTTGGAATAC | + |
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Preference number: 2 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRAAFGK*WLALEY Trigger: GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGC...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR GCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAAGGCTCCAGTGTTACATaGAGATTTCTAACAAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LGHKGCCLQRPLAEPCKEGSSVT*RFLTSS Trigger: ACTGCTTGTTAGAAATCTGCATGTAACACTGGAGCC...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR CAA 90 bp | TGGGAAATGGTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATaGGCCTGTCATATTGTCAAAAGCACAGGCCCAGGAAGGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: WEMVASFGILVILGR*ACHIVKSTGPGRQG Trigger: CCCTTGCCTTCCTGGGCCTGTGCTTTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCACCATTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCCTCCTTCGCCCGGGTTaGTCTCCTTGGTTTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VASFGILVILGRLACHIVLLRPG*SPWFSS Trigger: GGAAGAAAACCAAGGAGACCAACCCGGGCGAAGGAG...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCCCGGGTTGGTCTCCTTaGTTTTCTTCCTCTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VASFGILVILGRLACHIVPGWSP*FSSSFC Trigger: GCAGAAAGAGGAAGAAAACCAAGGAGACCAACCCGG...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCAGCTGGAATGTCAGGTaGTTGATGGTAAGGACAAGC | + |
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Preference number: 2 (lower is better) Translates to: VASFGILVILGRLACHIVSWNVR*LMVRTS Trigger: GCTTGTCCTTACCATCAACCACCTGACATTCCAGCT...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCAATAAATATTTACCATaGTCTATATCCACGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPNKYLP*SISTQQ Trigger: CTGCTGCGTGGATATAGACCATGGTAAATATTTATT...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCAAACCGGGTTGGTCTCCTTaGTTTTCTTCCTCTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ASFGILVILGRLACHIVKPGWSP*FSSSFC Trigger: GCAGAAAGAGGAAGAAAACCAAGGAGACCAACCCGG...TTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR TCA 72 bp | GACACCCTTTGTGAAGCAGCTGAGGACAGTCCTTGCTaGGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGC | + |
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Preference number: 3 (lower is better) Translates to: DTLCEAAEDSPC*GSVTASFQLDG Trigger: GCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCCTCAGCTGCTTCACAAAGGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 72 bp | GTCCATACACGCAGCCTGAGGGGGCCGCTTGGCCTTTaGCAGGCCATTCCTGATCTCTCCTTAGATGTGACA | + |
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Preference number: 3 (lower is better) Translates to: VHTRSLRGPLGL*QAIPDLSLDVT Trigger: TGTCACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAGGCTGCGTGTATGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR CCA 72 bp | TGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTaGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: WHLATTAGHISL*QQSMHRGKAPV Trigger: CACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CAA 90 bp | CCGACATCCCAGAAGAAACCCTCCTCCTTCCCCAGTGGAACTGCTAACCCCAAACCTCCTTCGCCCGGGTaGGTCTCCTTGGTTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PTSQKKPSSFPSGTANPKPPSPG*VSLVFF Trigger: GAAGAAAACCAAGGAGACCAACCCGGGCGAAGGAGG...TTTGGGGTTAGCAGTTCCACTGGGGAAGGAGGAGGGTTTCTTCTGGGATGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 72 bp | CGCCCGGGTTGGTCTCCTTGGTTTTCTTCCTCTTTCTaGCTTGCCCAGCGTTCTAGCCACCAGCTGGAATGT | + |
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Preference number: 3 (lower is better) Translates to: RPGWSPWFSSSF*LAQRSSHQLEC Trigger: ACATTCCAGCTGGTGGCTAGAACGCTGGGCAAGGCAGAAAGAGGAAGAAAACCAAGGAGACCAACCCGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 72 bp | GAGCAGCAGGACACACAGTGCTCCTGGGGCACCGTGTaGAACACAACTCTGAGGAGTCACCACACTGAACAT | + |
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Preference number: 3 (lower is better) Translates to: EQQDTQCSWGTV*NTTLRSHHTEH Trigger: ATGTTCAGTGTGGTGACTCCTCAGAGTTGTGTTGCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR CCA 72 bp | GACCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTaGGCACATTTCTCTGTGGCAGCAAAGCATGCACAG | + |
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Preference number: 3 (lower is better) Translates to: DPKAAMAFGHHR*AHFSVAAKHAQ Trigger: CTGTGCATGCTTTGCTGCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR TCA 72 bp | CACAGTGCTCCTGGGGCACCGTGTGCAACACAACTCTaGGGAGTCACCACACTGAACATACCCGAGATTTCC | + |
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Preference number: 3 (lower is better) Translates to: HSAPGAPCATQL*GVTTLNIPEIS Trigger: GGAAATCTCGGGTATGTTCAGTGTGGTGACTCCTCAGAGTTGTGTTGCACACGGTGCCCCAGGAGCACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR CCA 72 bp | CCAGTGAGGATCCAGGGACAGAGGAACAGAGCAGGCTaGCAGAGGCACTTGACTCACTCAAGCAAACCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PVRIQGQRNRAG*QRHLTHSSKPE Trigger: TTCAGGTTTGCTTGAGTGAGTCAAGTGCCTCTGCCAGCCTGCTCTGTTCCTCTGTCCCTGGATCCTCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR TCA 72 bp | AGGGACAGAGGAACAGAGCAGGCTGGCAGAGGCACTTaGCTCACTCAAGCAAACCTGAAGGTTTACGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: RDRGTEQAGRGT*LTQANLKVYVN Trigger: GTTGACGTAAACCTTCAGGTTTGCTTGAGTGAGTCAAGTGCCTCTGCCAGCCTGCTCTGTTCCTCTGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 72 bp | GGCTCCAGTGTTACATGCAGATTTCTAACAAGCAGTTaGGAGCCACCTGCTCCAATGCGTAACAGCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GSSVTCRFLTSS*EPPAPMRNSCC Trigger: GCAGCAGCTGTTACGCATTGGAGCAGGTGGCTCGCAACTGCTTGTTAGAAATCTGCATGTAACACTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR GCA 72 bp | CCTGGCCTCCTTCCTAATAATCTAGGACATAAAGGCTaGTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: PGLLPNNLGHKG*CLQRPLAEPCK Trigger: TTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGGAAGGAGGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| 3UTR-3UTR CAA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACCTTCCTCTTTCTGCCTaGCCCAGCGTTCTAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: FYKQAVAAFGKWWLALEYLPLSA*PSVLAT Trigger: GGTGGCTAGAACGCTGGGCAAGGCAGAAAGAGGAAG...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCCCTCCTTCGCCCGGGTaGGTCTCCTTGGTTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VASFGILVILGRLACHIVPPSPG*VSLVFF Trigger: GAAGAAAACCAAGGAGACCAACCCGGGCGAAGGAGG...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR TCA 72 bp | AGGCTGGCAGAGGCACTTGACTCACTCAAGCAAACCTaGAGGTTTACGTCAACCATAAGCTCAGCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLAEALDSLKQT*RFTSTISSALV Trigger: AACCAAAGCTGAGCTTATGGTTGACGTAAACCTTCAGGTTTGCTTGAGTGAGTCAAGTGCCTCTGCCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCAAACTTCCTCTTTCTGCCTaGCCCAGCGTTCTAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: ASFGILVILGRLACHIVKLPLSA*PSVLAT Trigger: GGTGGCTAGAACGCTGGGCAAGGCAGAAAGAGGAAG...TTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR-3UTR CAA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCGTCATTTTAGGCAGATaGGCCTGTCATATTGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPVILGR*ACHIVK Trigger: TTTGACAATATGACAGGCCAATCTGCCTAAAATGAC...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR TCA 72 bp | CAGCGATTGAGGGAAAACGAGGAAAGAACCTTTCTGTaGCTCTCAATAACGAATTCTACAAACAGGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QRLRENEERTFL*LSITNSTNRLL Trigger: CAACAGCCTGTTTGTAGAATTCGTTATTGAGAGTCACAGAAAGGTTCTTTCCTCGTTTTCCCTCAATCGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR TCA 72 bp | AATATTTACCATGGTCTATATCCACGCAGCAGCGATTaGGGGAAAACGAGGAAAGAACCTTTCTGTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: NIYHGLYPRSSD*GKTRKEPFCDS Trigger: AGAGTCACAGAAAGGTTCTTTCCTCGTTTTCCCTCAATCGCTGCTGCGTGGATATAGACCATGGTAAATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | GGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGAGTCGTCATGTGTGCTaGCCCCGCTGCCCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQSLLRLCYSQLPARRPESRHVC*PRCPRW Trigger: CCAGCGGGGGCAGCGGGGGCAGCACACATGACGACT...CTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTTCAGCCTGGGCACCATaGGTGGGGTGGCTGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSSAWAP*VGWLGA Trigger: TGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGA...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | GGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGCAAAGTCGTCATGTGTaGTGCCCCCGCTGCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSLLRLCYSQLPARRPEQSRHV*CPRCPR Trigger: GCGGGGGCAGCGGGGGCAGCACACATGACGACTTTG...CTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTCATGGAGGGGAGATGTaGTCTCTGGGGACTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSHGGEM*SLGTPG Trigger: CCCCGGAGTCCCCAGAGACCACATCTCCCCTCCATG...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTGATCTCTCCTTAGATGTGTCAGCCTGGGCACCATaGGTGGGGTGGCTGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGPLGLCQAIPDLSLDVSAWAP*VGWLGA Trigger: TGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGA...CACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTCCCACAGCAGGCAGCTaGCCTGACAGGGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSPTAGS*PDRAFF Trigger: AAAGAAGGCCCTGTCAGGGCAGCTGCCTGCTGTGGG...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTGGGTGCCCACAGGGGTaGCCACTGTTCCAACTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSGCPQG*PLFQLE Trigger: TTCGAGTTGGAACAGTGGGCACCCCTGTGGGCACCC...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | GGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGGGGTGCCCACAGGGGTaGCCACTGTTCCAACTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQSLLRLCYSQLPARRPEGCPQG*PLFQLE Trigger: TTCGAGTTGGAACAGTGGGCACCCCTGTGGGCACCC...CTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGGGGAGATGTGGTCTCTaGGGACTCCGGGGGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQSLLRLCYSQLPARRPEGRCGL*GLRGIH Trigger: GTGAATCCCCCGGAGTCCCCAGAGACCACATCTCCC...CTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCATGGAGGGGAGATGTaGTCTCTGGGGACTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTVLAEALLQPASSSTAHGGEM*SLGTPG Trigger: CCCCGGAGTCCCCAGAGACCACATCTCCCCTCCATG...GGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | AGGAGTATCCTCACAGGTACTGAGCAATCTTCACGGGAGGCCGACATCCCAGAAGTGTGCTGCCCCCGCTaGCCCCGCTGGAGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSILTGTEQSSREADIPEVCCPR*PRWSHL Trigger: CAGATGGCTCCAGCGGGGGCAGCGGGGGCAGCACAC...TTCTGGGATGTCGGCCTCCCGTGAAGATTGCTCAGTACCTGTGAGGATACTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAACTTGAGCAGCAGGACACACAGTGCTCCTGGGGCACCGTGTGCAACACACCCACAGCAGGCAGCTaGCCTGACAGGGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QELEQQDTQCSWGTVCNTPTAGS*PDRAFF Trigger: AAAGAAGGCCCTGTCAGGGCAGCTGCCTGCTGTGGG...TGTGTTGCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTGCTCAAGTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACAGTGTGCTGCCCCCGCTaGCCCCGCTGGAGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTVCCPR*PRWSHL Trigger: CAGATGGCTCCAGCGGGGGCAGCGGGGGCAGCACAC...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCCCCCGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPPRCPR*SHLSAG Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCGGGG...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACACCCCGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTPRCPR*SHLSAG Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCGGGG...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCCAAGATGTCATGGGGTaGGGCCCGTCCTTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGQDVMG*GPSFTA Trigger: AGCAGTGAAGGACGGGCCTCACCCCATGACATCTTG...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACCGGGTACGCGACCCCTaGGTCCTCAGCAGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNRVRDP*VLSSSV Trigger: TACAGAACTGCTGAGGACGCAGGGGTCGCGTACCCG...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACTCTCAGTGTCCTCACTaGTTGAGGGCGTGGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNSQCPH*LRAWRH Trigger: GTGCCGCCACGCCCTCAAGCAGTGAGGACACTGAGA...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTAGTCGTCATGTGTGCTaGCCCCGCTGCCCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRSRHVC*PRCPRW Trigger: CCAGCGGGGGCAGCGGGGGCAGCACACATGACGACT...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CAGGAACTTGAGCAGCAGGACACACAGTGCTCCTGGGGCACCGTGTGCAACACACCAGGAACCATCAGCTaGGAGGGAGGGGATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QELEQQDTQCSWGTVCNTPGTIS*EGGDVE Trigger: TTCCACATCCCCTCCCTCCCAGCTGATGGTTCCTGG...TGTGTTGCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTGCTCAAGTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCACAAGATGTCATGGGGTaGGGCCCGTCCTTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGTCRSHRGTTLSFTWPQDVMG*GPSFTA Trigger: AGCAGTGAAGGACGGGCCTCACCCCATGACATCTTG...TGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTGGGAGGGAGGGGATGTaGAAAAAGATGTGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSGREGM*KKMWYT Trigger: TGTGTACCACATCTTTTTCCACATCCCCTCCCTCCC...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACGTGGTACACACTTCCTaGGAGTCTTCCACTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNVVHTS*ESSTDG Trigger: CCCGTCAGTGGAAGACTCTCAGGAAGTGTGTACCAC...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | TCCCAGAAGAAACCCTCCTCCTTCCCCAGTGGAACTGCTAACCCCAAACATACTGGAAAGGCGAGAGCTTaGGAGCTGGGAGGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQKKPSSFPSGTANPKHTGKARA*ELGGRG Trigger: TCCCCTCCCTCCCAGCTCTCAAGCTCTCGCCTTTCC...AGTATGTTTGGGGTTAGCAGTTCCACTGGGGAAGGAGGAGGGTTTCTTCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028678.9 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCGGGGTCCTCTCAAATTaGCTGGTGGACATGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGGVLSN*LVDMNA Trigger: GGCATTCATGTCCACCAGGCAATTTGAGAGGACCCC...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAACTTGAGCAGCAGGACACACAGTGCTCCTGGGGCACCGTGTGCAACACACCATCAGAAGGCATGTaGATCACCAGTCTCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QELEQQDTQCSWGTVCNTPSEGM*ITSLSG Trigger: TCCCGAGAGACTGGTGATGCACATGCCTTCTGATGG...TGTGTTGCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTGCTCAAGTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSNPHDR*GPLKLP Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAAGAAACCCTCCTCCTTCCCCAGTGGAACTGCTAACCCCAAACATACTCCTGGGCACCATGAGTaGGGTGGCTGGGAGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQKKPSSFPSGTANPKHTPGHHE*GGWEQE Trigger: CTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGG...AGTATGTTTGGGGTTAGCAGTTCCACTGGGGAAGGAGGAGGGTTTCTTCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CCGACATCCCAGAAGAAACCCTCCTCCTTCCCCAGTGGAACTGCTAACCCCAAAGAGTGCAGGCTGCCATaGAGGGGAGATGTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSQKKPSSFPSGTANPKECRLP*RGDVVS Trigger: AGAGACCACATCTCCCCTCCATGGCAGCCTGCACTC...TTTGGGGTTAGCAGTTCCACTGGGGAAGGAGGAGGGTTTCTTCTGGGATGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTCGGGTACGCGACCCCTaGGTCCTCAGCAGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRRVRDP*VLSSSV Trigger: TACAGAACTGCTGAGGACGCAGGGGTCGCGTACCCG...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACATCTCAGTGTCCTCACTaGTTGAGGGCGTGGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTSQCPH*LRAWRH Trigger: GTGCCGCCACGCCCTCAAGCAGTGAGGACACTGAGA...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCAAGTCCTTCCTGTCCTaGGAGCTGAGTTCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGKSFLS*ELSSVS Trigger: GGAAACTGAACTCAGCTCCCAGGACAGGAAGGACTT...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTTCTTGGGAGCAAACATaGCGAAAGGTATGTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSSWEQT*RKVCPN Trigger: GTTTGGACATACCTTTCGCCATGTTTGCTCCCAAGA...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACAGGGAGATGTGGTCTCTaGGGACTCCGGGGGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTGRCGL*GLRGIH Trigger: GTGAATCCCCCGGAGTCCCCAGAGACCACATCTCCC...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTAAGATGATGAGCGGGTaGAAATCTTTTCTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLCYSQLPARRPESSPSKMMSG*KSFLQV Trigger: GACTTGGAGAAAAGATTTGCACCCGCTCATCATCTT...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACCAAAGTCGTCATGTGTaGTGCCCCCGCTGCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FYKQAVAAFGKWWLALEYQSRHV*CPRCPR Trigger: GCGGGGGCAGCGGGGGCAGCACACATGACGACTTTG...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTGATCTCTCCTTAGATGTGGCCTTCTTTGCTTCATaGGTGACTTCTGGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGPLGLCQAIPDLSLDVAFFAS*VTSGMS Trigger: AGACATCCCAGAAGTCACCCATGAAGCAAAGAAGGC...CACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTGATCTCTCCTTAGATGTGAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGPLGLCQAIPDLSLDVNPHDR*GPLKLP Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...CACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTGATCTCTCCTTAGATGTGGGACGGTCAACAAAGTaGTCAATGATAATCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRGPLGLCQAIPDLSLDVGRSTK*SMIIPM Trigger: CATGGGGATTATCATTGATCACTTTGTTGACCGTCC...CACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACACATGCCCTTGCTTCCTaGAGAGTCGATAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTHALAS*RVDRLV Trigger: CACCAGCCTATCGACTCTCCAGGAAGCAAGGGCATG...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACAGCAGTAAACACTACTaGATAAGCCAGGTCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNSSKHY*ISQVSR Trigger: TCGGCTGACCTGGCTTATCCAGTAGTGTTTACTGCT...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028678.9 |
||
| CDS-3UTR CCA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACCCTGGGCACCATGAGTaGGGTGGCTGGGAGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYKQAVAAFGKWWLALEYPGHHE*GGWEQE Trigger: CTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGG...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR CAA 72 bp | CAGGGACAGAGGAACAGAGCAGGCTGGCAGAGGCACTaGACTCACTCAAGCAAACCTGAAGGTTTACGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQRNRAGWQRH*THSSKPEGLRQ Trigger: TTGACGTAAACCTTCAGGTTTGCTTGAGTGAGTCAAGTGCCTCTGCCAGCCTGCTCTGTTCCTCTGTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTACAGACGGGGTCCTCTCAAATTaGCTGGTGGACATGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WFLEGEPIQLVKPGPRTDGVLSN*LVDMNA Trigger: GGCATTCATGTCCACCAGGCAATTTGAGAGGACCCC...GTCTGTACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACACCATCAGAAGGCATGTaGATCACCAGTCTCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTPSEGM*ITSLSG Trigger: TCCCGAGAGACTGGTGATGCACATGCCTTCTGATGG...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCGGGTTTGTTGACAAATaGTCCCACTTTTCGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGGFVDK*SHFSDK Trigger: TTTGTCCGAAAAGTGGGAGCATTTGTCAACAAACCC...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAAAAGTCCTTCCTGTCCTaGGAGCTGAGTTCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGHKGCCLQRPLAEPCKEKSFLS*ELSSVS Trigger: GGAAACTGAACTCAGCTCCCAGGACAGGAAGGACTT...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCATGTGGAAAAAGATGTaGTACACACTTCCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRTVLAEALLQPASSSTAMWKKM*YTLPES Trigger: ACTCTCAGGAAGTGTGTACCACATCTTTTTCCACAT...GGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACCATCTGAGTGCAGGCTaGCATGGAGGGGAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYKQAVAAFGKWWLALEYHLSAG*HGGEMW Trigger: CCACATCTCCCCTCCATGGCAGCCTGCACTCAGATG...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CCTAATAATCTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTCTCCAAGTCGAGCCTaGACAATCACTTGGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PNNLGHKGCCLQRPLAEPSPSRA*TITWTV Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGACTTGGAGA...GGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGATTATTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CCA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTCCAACTCGAACTGTCTaGAAGCCTTCTCCTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRPTRTV*KPSPKP Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGAGTTGG...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAAGGACGGTCAACAAAGTaGTCAATGATAATCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGHKGCCLQRPLAEPCKEGRSTK*SMIIPM Trigger: CATGGGGATTATCATTGATCACTTTGTTGACCGTCC...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACCCTGGTGGACATGAATaGCAAGTTAATTCTATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNPGGHE*QVNSIS Trigger: GCTTATAGAATTAACTTGGCATTCATGTCCACCAGG...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACAGCCTTCTTTGCTTCATaGGTGACTTCTGGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTAFFAS*VTSGMS Trigger: AGACATCCCAGAAGTCACCCATGAAGCAAAGAAGGC...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAATGTGGAAAAAGATGTaGTACACACTTCCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGTCRSHRGTTLSFTWPMWKKM*YTLPES Trigger: ACTCTCAGGAAGTGTGTACCACATCTTTTTCCACAT...TGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTCCAGCTCCAAATTCTTaGGAGCAAACATGGCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRPAPNS*EQTWRK Trigger: CTTTCGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | CTAGGACATAAAGGCTGCTGTCTGCAAAGGCCACTGGCTGAGCCCTGCAAAGAAAAGATGATGAGCGGGTaGAAATCTTTTCTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGHKGCCLQRPLAEPCKEKMMSG*KSFLQV Trigger: GACTTGGAGAAAAGATTTGCACCCGCTCATCATCTT...TTCTTTGCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | AGGAGTATCCTCACAGGTACTGAGCAATCTTCACGGGAGGCCGACATCCCAGAAGGGTTTGTTGACAAATaGTCCCACTTTTCGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSILTGTEQSSREADIPEGFVDK*SHFSDK Trigger: TTTGTCCGAAAAGTGGGAGCATTTGTCAACAAACCC...TTCTGGGATGTCGGCCTCCCGTGAAGATTGCTCAGTACCTGTGAGGATACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTACAGACTCTTGGGAGCAAACATaGCGAAAGGTATGTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WFLEGEPIQLVKPGPRTDSWEQT*RKVCPN Trigger: GTTTGGACATACCTTTCGCCATGTTTGCTCCCAAGA...GTCTGTACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCGAGTGCAGGCTGCCATaGAGGGGAGATGTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VASFGILVILGRLACHIVECRLP*RGDVVS Trigger: AGAGACCACATCTCCCCTCCATGGCAGCCTGCACTC...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CCA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTGGTCCCCAAGTCCATTaGAAGAATGTCGTCTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRGPQVH*KNVVFR Trigger: TCTAAAGACGACATTCTTCCAATGGACTTGGGGACC...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR GCA 90 bp | AGGAGTATCCTCACAGGTACTGAGCAATCTTCACGGGAGGCCGACATCCCAGAACCTGGTGGACATGAATaGCAAGTTAATTCTATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSILTGTEQSSREADIPEPGGHE*QVNSIS Trigger: GCTTATAGAATTAACTTGGCATTCATGTCCACCAGG...TTCTGGGATGTCGGCCTCCCGTGAAGATTGCTCAGTACCTGTGAGGATACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CCA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCCATGCCCTTGCTTCCTaGAGAGTCGATAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VASFGILVILGRLACHIVHALAS*RVDRLV Trigger: CACCAGCCTATCGACTCTCCAGGAAGCAAGGGCATG...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACCCAACTCGAACTGTCTaGAAGCCTTCTCCTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYKQAVAAFGKWWLALEYPTRTV*KPSPKP Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGAGTTGG...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CCA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FYKQAVAAFGKWWLALEYAWTIT*TVLRAK Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTACAGACAAAATTACATATTCATaGCCTTGCTTCCTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WFLEGEPIQLVKPGPRTDKITYS*PCFLES Trigger: ACTCTCCAGGAAGCAAGGGCATGAATATGTAATTTT...GTCTGTACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CCA 90 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCGGGAGGGAGGGGATGTaGAAAAAGATGTGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: VASFGILVILGRLACHIVGREGM*KKMWYT Trigger: TGTGTACCACATCTTTTTCCACATCCCCTCCCTCCC...GACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| 3UTR CAA 72 bp | GTGGCTAGCTTTGGAATACTTGTCATTTTAGGCAGATaGGCCTGTCATATTGTCAAAAGCACAGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VASFGILVILGR*ACHIVKSTGPG Trigger: TCCTGGGCCTGTGCTTTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCAAAGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASFGILVILGRLACHIVKAWTIT*TVLRAK Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...TTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | AATAAATATTTACCATGGTCTATATCCACGCAGCAGCGATTGAGGGAAAACGAGCTCAGAAGTCTTGAGTaGGATTTCCACACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKYLPWSISTQQRLRENELRSLE*DFHTHR Trigger: TCTATGTGTGTGGAAATCTCACTCAAGACTTCTGAG...CTCGTTTTCCCTCAATCGCTGCTGCGTGGATATAGACCATGGTAAATATTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CCA 90 bp | GCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCAAAGGTCCCCAAGTCCATTaGAAGAATGTCGTCTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASFGILVILGRLACHIVKGPQVH*KNVVFR Trigger: TCTAAAGACGACATTCTTCCAATGGACTTGGGGACC...TTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR TCA 90 bp | GCTAGCTTTGGAATACTTGTCATTTTAGGCAGATTGGCCTGTCATATTGTCAAACTCAGAAGTCTTGAGTaGGATTTCCACACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASFGILVILGRLACHIVKLRSLE*DFHTHR Trigger: TCTATGTGTGTGGAAATCTCACTCAAGACTTCTGAG...TTTGACAATATGACAGGCCAATCTGCCTAAAATGACAAGTATTCCAAAGCTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS TCA 90 bp | GAAGGCATGTGCATCACCAGTCTCTCGGGATCAGCCTGGGCACCATaGGTGGGGTGGCTGGGAGCAAGAGTTACCCCGCCTTCCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGMCITSLSGSAWAP*VGWLGARVTPPSFP Trigger: TGGGAAGGAAGGCGGGGTAACTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGATCCCGAGAGACTGGTGATGCACATGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS CCA 90 bp | TCACCAGTCTCTCGGGATCAGCCTGGGCACCATGAGTGGGGTGGCTaGGAGCAAGAGTTACCCCGCCTTCCTTCCCAGGAACCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVSRDQPGHHEWGG*EQELPRLPSQEPSA Trigger: AGCTGATGGTTCCTGGGAAGGAAGGCGGGGTAACTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGATCCCGAGAGACTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS CCA 90 bp | GCATGTGCATCACCAGTCTCTCGGGATCAGCCTGGGCACCATGAGTaGGGTGGCTGGGAGCAAGAGTTACCCCGCCTTCCTTCCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ACASPVSRDQPGHHE*GGWEQELPRLPSQE Trigger: TTCCTGGGAAGGAAGGCGGGGTAACTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGATCCCGAGAGACTGGTGATGCACATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CAA 90 bp | CAGGGACTTGTAGGTCCCATAGGGGAACCACCCTGTCTTTCACCTGGCCAGAACCAGTGTCCTCACTGCTaGAGGGCGTGGCGGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGLVGPIGEPPCLSPGQNQCPHC*RAWRHN Trigger: ATTGTGCCGCCACGCCCTCAAGCAGTGAGGACACTG...GTTCTGGCCAGGTGAAAGACAGGGTGGTTCCCCTATGGGACCTACAAGTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS CCA 90 bp | GGCGAGAGCTTGAGAGCTGGGAGGGAGGGGATGTGGAAAAAGATGTaGTACACACTTCCTGAGAGTCTTCCACTGACGGGTACGCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GESLRAGREGMWKKM*YTLPESLPLTGTRP Trigger: GGGTCGCGTACCCGTCAGTGGAAGACTCTCAGGAAGTGTGTACCACATCTTTTTCCACATCCCCTCCCTCCCAGCTCTCAAGCTCTCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028678.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGTCCTCGCCAAGTAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRLCYSQLPARRPESSPSSLDNH*DSLEGK Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...ACTTGGCGAGGACTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS TCA 90 bp | CCGTCCTTCACTGCTGTTAGACACAGTCTCAGTGTCCTCACTGCTTaGGGGCGTGGCGGCACAATGGGTCCCATCAGAAGGCATGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSFTAVRHSLSVLTA*GRGGTMGPIRRHVH Trigger: ATGCACATGCCTTCTGATGGGACCCATTGTGCCGCCACGCCCTCAAGCAGTGAGGACACTGAGACTGTGTCTAACAGCAGTGAAGGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS CCA 90 bp | TCCCAGGAACCATCAGCTGGGAGGGAGGGGATGTGGAAAAAGATGTaGTACACACTTCCTGAGAGTCTTCCACTGACGGGTACGCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SQEPSAGREGMWKKM*YTLPESLPLTGTRP Trigger: GGGTCGCGTACCCGTCAGTGGAAGACTCTCAGGAAGTGTGTACCACATCTTTTTCCACATCCCCTCCCTCCCAGCTGATGGTTCCTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076803.12 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTGATCTCTCCTTAGATGTGAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRGPLGLCQAIPDLSLDVSLDNH*DSLEGK Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...CACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
||
| CDS-3UTR CAA 90 bp | CTGAGGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCTCTCCCTCAGAAGTCTaGAGTGAGATTTCCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LRTVLAEALLQPASSSTASPSEV*SEISTH Trigger: GTGTGTGGAAATCTCACTCAAGACTTCTGAGGGAGA...GGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | TCCCAGAAGAAACCCTCCTCCTTCCCCAGTGGAACTGCTAACCCCAAACATACTCAGTGTCCTCACTGCTaGAGGGCGTGGCGGCACAAT | + |
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Preference number: 5 (lower is better) Translates to: SQKKPSSFPSGTANPKHTQCPHC*RAWRHN Trigger: ATTGTGCCGCCACGCCCTCAAGCAGTGAGGACACTG...AGTATGTTTGGGGTTAGCAGTTCCACTGGGGAAGGAGGAGGGTTTCTTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS GCA 90 bp | TTGAGTGAGATTTCCACACACATAGATCGCCCCACAGCAGGCAGCTaGCCTGACAGGGCCTTCTTTGCTTCATGGGTGACTTCTGGGATG | + |
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Preference number: 5 (lower is better) Translates to: LSEISTHIDRPTAGS*PDRAFFASWVTSGM Trigger: CATCCCAGAAGTCACCCATGAAGCAAAGAAGGCCCTGTCAGGGCAGCTGCCTGCTGTGGGGCGATCTATGTGTGTGGAAATCTCACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCTCCAGCTCCAAATTCTaGGGAGCAAACATGGCGAAA | + |
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Preference number: 5 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGSSSKF*GANMAK Trigger: TTTCGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | CCCAAAGGCTGCAATGGCATTTGGCCACCACCGCTGGGCACATTTCTCTGTGGCTACATATTCATGCCCTaGCTTCCTGGAGAGTCGATA | + |
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Preference number: 5 (lower is better) Translates to: PKGCNGIWPPPLGTFLCGYIFMP*LPGESI Trigger: TATCGACTCTCCAGGAAGCAAGGGCATGAATATGTA...GCCACAGAGAAATGTGCCCAGCGGTGGTGGCCAAATGCCATTGCAGCCTTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | AGGAGTATCCTCACAGGTACTGAGCAATCTTCACGGGAGGCCGACATCCCAGAATGGGGTCCTCTCAAATaGCCTGGTGGACATGAATGC | + |
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Preference number: 5 (lower is better) Translates to: RSILTGTEQSSREADIPEWGPLK*PGGHEC Trigger: GCATTCATGTCCACCAGGCAATTTGAGAGGACCCCA...TTCTGGGATGTCGGCCTCCCGTGAAGATTGCTCAGTACCTGTGAGGATACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 90 bp | TGCTCCCACTTTTCGGACAAAGATAGTCTCCAAGATGTCATGGGGTaGGGCCCGTCCTTCACTGCTGTTAGACACAGTCTCAGTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CSHFSDKDSLQDVMG*GPSFTAVRHSLSVL Trigger: GAGGACACTGAGACTGTGTCTAACAGCAGTGAAGGACGGGCCTCACCCCATGACATCTTGGAGACTATCTTTGTCCGAAAAGTGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 90 bp | CGCCCCACAGCAGGCAGCTGCCCTGACAGGGCCTTCTTTGCTTCATaGGTGACTTCTGGGATGTCTTTGATTGCTAAATTGAACCAATCT | + |
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Preference number: 5 (lower is better) Translates to: RPTAGSCPDRAFFAS*VTSGMSLIAKLNQS Trigger: AGATTGGTTCAATTTAGCAATCAAAGACATCCCAGAAGTCACCCATGAAGCAAAGAAGGCCCTGTCAGGGCAGCTGCCTGCTGTGGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | GGACAGTCCTTGCTGAGGCTCTGTTACAGCCAGCTTCCAGCTCGACGGCCCGAGAAAAACTTAATAAACTaGTCCAAGTCCTTCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GQSLLRLCYSQLPARRPEKNLIN*SKSFLS Trigger: GGACAGGAAGGACTTGGACAAGTTTATTAAGTTTTT...CTCGGGCCGTCGAGCTGGAAGCTGGCTGTAACAGAGCCTCAGCAAGGACTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | TGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTACAGACTGGGGTCCTCTCAAATaGCCTGGTGGACATGAATGC | + |
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Preference number: 5 (lower is better) Translates to: WFLEGEPIQLVKPGPRTDWGPLK*PGGHEC Trigger: GCATTCATGTCCACCAGGCAATTTGAGAGGACCCCA...GTCTGTACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 90 bp | GGATGTGGAAAAAGATGTGGTACACACTTCCTGAGAGTCTTCCACTaGCGGGTACGCGACCCCTGCGTCCTCAGCAGTTCTGTAATTACA | + |
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Preference number: 5 (lower is better) Translates to: GCGKRCGTHFLRVFH*RVRDPCVLSSSVIT Trigger: TGTAATTACAGAACTGCTGAGGACGCAGGGGTCGCGTACCCGTCAGTGGAAGACTCTCAGGAAGTGTGTACCACATCTTTTTCCACATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 90 bp | ACACCAAATTTCCAACTCCATAGAATCTCCCTCAGAAGTCTTGAGTaGGATTTCCACACACATAGATCGCCCCACAGCAGGCAGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TPNFQLHRISLRSLE*DFHTHRSPHSRQLP Trigger: GGGCAGCTGCCTGCTGTGGGGCGATCTATGTGTGTGGAAATCTCACTCAAGACTTCTGAGGGAGATTCTATGGAGTTGGAAATTTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 90 bp | ACAAATGCTCCCACTTTTCGGACAAAGATAGTCTCCAAGATGTCATaGGGTGAGGCCCGTCCTTCACTGCTGTTAGACACAGTCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TNAPTFRTKIVSKMS*GEARPSLLLDTVSV Trigger: CACTGAGACTGTGTCTAACAGCAGTGAAGGACGGGCCTCACCCCATGACATCTTGGAGACTATCTTTGTCCGAAAAGTGGGAGCATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGGGGCCGCTTGGCCTTTGCCAGGCCATTCCTGATCTCTCCTTAGATGTGAAAAACTTAATAAACTaGTCCAAGTCCTTCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LRGPLGLCQAIPDLSLDVKNLIN*SKSFLS Trigger: GGACAGGAAGGACTTGGACAAGTTTATTAAGTTTTT...CACATCTAAGGAGAGATCAGGAATGGCCTGGCAAAGGCCAAGCGGCCCCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | CAGGAACTTGAGCAGCAGGACACACAGTGCTCCTGGGGCACCGTGTGCAACACAACTTCTGGGATGTCTTaGATTGCTAAATTGAACCAA | + |
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Preference number: 5 (lower is better) Translates to: QELEQQDTQCSWGTVCNTTSGMS*IAKLNQ Trigger: TTGGTTCAATTTAGCAATCAAAGACATCCCAGAAGT...TGTGTTGCACACGGTGCCCCAGGAGCACTGTGTGTCCTGCTGCTCAAGTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | GCACATTTCTCTGTGGCAGCAAAGCATGCACAGGGGAAAGGCTCCAGTGTTACATCTCCCTCAGAAGTCTaGAGTGAGATTTCCACACAC | + |
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Preference number: 5 (lower is better) Translates to: AHFSVAAKHAQGKGSSVTSPSEV*SEISTH Trigger: GTGTGTGGAAATCTCACTCAAGACTTCTGAGGGAGA...TGTAACACTGGAGCCTTTCCCCTGTGCATGCTTTGCTGCCACAGAGAAATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | CAGCTTTGGTTTCTTGAAGGGGAACCAATCCAGCTTGTAAAGCCAGGGCCTCGTTACATATTCATGCCCTaGCTTCCTGGAGAGTCGATA | + |
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Preference number: 5 (lower is better) Translates to: QLWFLEGEPIQLVKPGPRYIFMP*LPGESI Trigger: TATCGACTCTCCAGGAAGCAAGGGCATGAATATGTA...ACGAGGCCCTGGCTTTACAAGCTGGATTGGTTCCCCTTCAAGAAACCAAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS GCA 90 bp | GTCCAAACTCGTCACAGTCACCTGATTGATGGGTTTGTTGACAAATaGTCCCACTTTTCGGACAAAGATAGTCTCCAAGATGTCATGGGG | + |
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Preference number: 5 (lower is better) Translates to: VQTRHSHLIDGFVDK*SHFSDKDSLQDVMG Trigger: CCCCATGACATCTTGGAGACTATCTTTGTCCGAAAAGTGGGAGCATTTGTCAACAAACCCATCAATCAGGTGACTGTGACGAGTTTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS-3UTR CAA 90 bp | TTCTACAAACAGGCTGTTGCAGCCTTTGGGAAATGGTGGCTAGCTTTGGAATACTCCAGCTCCAAATTCTaGGGAGCAAACATGGCGAAA | + |
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Preference number: 5 (lower is better) Translates to: FYKQAVAAFGKWWLALEYSSSKF*GANMAK Trigger: TTTCGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...GTATTCCAAAGCTAGCCACCATTTCCCAAAGGCTGCAACAGCCTGTTTGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 90 bp | GGCTGGTGTCACCCTTGTAATAGCGAGAAGAGACTTCAGCAGCAGTaGCAATCGGTTGTATACAGTGTAGGAAACTTTGATTTCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: GWCHPCNSEKRLQQQ*QSVVYSVGNFDFFV Trigger: GACAAAGAAATCAAAGTTTCCTACACTGTATACAACCGATTGTCACTGCTGCTGAAGTCTCTTCTCGCTATTACAAGGGTGACACCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS GCA 72 bp | GGCGTGGCGGCACAATGGGTCCCATCAGAAGGCATGTaGATCACCAGTCTCTCGGGATCAGCCTGGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: GVAAQWVPSEGM*ITSLSGSAWAP Trigger: TGGTGCCCAGGCTGATCCCGAGAGACTGGTGATGCACATGCCTTCTGATGGGACCCATTGTGCCGCCACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | TCTCGGGATCAGCCTGGGCACCATGAGTGGGGTGGCTaGGAGCAAGAGTTACCCCGCCTTCCTTCCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SRDQPGHHEWGG*EQELPRLPSQE Trigger: TTCCTGGGAAGGAAGGCGGGGTAACTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGATCCCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | TCACCAGTCTCTCGGGATCAGCCTGGGCACCATGAGTaGGGTGGCTGGGAGCAAGAGTTACCCCGCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPVSRDQPGHHE*GGWEQELPRLP Trigger: AGGAAGGCGGGGTAACTCTTGCTCCCAGCCACCCCACTCATGGTGCCCAGGCTGATCCCGAGAGACTGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS GCA 72 bp | ATTTCCACACACATAGATCGCCCCACAGCAGGCAGCTaGCCTGACAGGGCCTTCTTTGCTTCATGGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: ISTHIDRPTAGS*PDRAFFASWVT Trigger: AGTCACCCATGAAGCAAAGAAGGCCCTGTCAGGGCAGCTGCCTGCTGTGGGGCGATCTATGTGTGTGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 72 bp | AAAAGATGTGGTACACACTTCCTGAGAGTCTTCCACTaGCGGGTACGCGACCCCTGCGTCCTCAGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: KRCGTHFLRVFH*RVRDPCVLSSS Trigger: AGAACTGCTGAGGACGCAGGGGTCGCGTACCCGTCAGTGGAAGACTCTCAGGAAGTGTGTACCACATCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | CCATCAGCTGGGAGGGAGGGGATGTGGAAAAAGATGTaGTACACACTTCCTGAGAGTCTTCCACTGACGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSAGREGMWKKM*YTLPESLPLTG Trigger: ACCCGTCAGTGGAAGACTCTCAGGAAGTGTGTACCACATCTTTTTCCACATCCCCTCCCTCCCAGCTGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076803.12 |
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| CDS CAA 90 bp | TCCGGGGGATTCACCATAGGATCAGCATCCTCCAGCTCCAAATTCTaGGGAGCAAACATGGCGAAAGGTATGTCCAAACTCGTCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: SGGFTIGSASSSSKF*GANMAKGMSKLVTV Trigger: GACTGTGACGAGTTTGGACATACCTTTCGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATGCTGATCCTATGGTGAATCCCCCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS GCA 72 bp | ACCAATCTGAACCCGTCGGGGAAGATGATGAGCGGGTaGAAATCTTTTCTCCAAGTCGAGCCTGGACAATCA | + |
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Preference number: 6 (lower is better) Translates to: TNLNPSGKMMSG*KSFLQVEPGQS Trigger: TGATTGTCCAGGCTCGACTTGGAGAAAAGATTTGCACCCGCTCATCATCTTCCCCGACGGGTTCAGATTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | GCAGGCAGCTGCCCTGACAGGGCCTTCTTTGCTTCATaGGTGACTTCTGGGATGTCTTTGATTGCTAAATTG | + |
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Preference number: 6 (lower is better) Translates to: AGSCPDRAFFAS*VTSGMSLIAKL Trigger: CAATTTAGCAATCAAAGACATCCCAGAAGTCACCCATGAAGCAAAGAAGGCCCTGTCAGGGCAGCTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | CCCACTTTTCGGACAAAGATAGTCTCCAAGATGTCATaGGGTGAGGCCCGTCCTTCACTGCTGTTAGACACA | + |
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Preference number: 6 (lower is better) Translates to: PTFRTKIVSKMS*GEARPSLLLDT Trigger: TGTGTCTAACAGCAGTGAAGGACGGGCCTCACCCCATGACATCTTGGAGACTATCTTTGTCCGAAAAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | CAGCATCCTCCAGCTCCAAATTCTTGGGAGCAAACATaGCGAAAGGTATGTCCAAACTCGTCACAGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: QHPPAPNSWEQT*RKVCPNSSQSP Trigger: AGGTGACTGTGACGAGTTTGGACATACCTTTCGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 72 bp | TTCCAACTCCATAGAATCTCCCTCAGAAGTCTTGAGTaGGATTTCCACACACATAGATCGCCCCACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: FQLHRISLRSLE*DFHTHRSPHSR Trigger: CCTGCTGTGGGGCGATCTATGTGTGTGGAAATCTCACTCAAGACTTCTGAGGGAGATTCTATGGAGTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | ATATTCATGCCCTTGCTTCCTGGAGAGTCGATAGGCTaGTGTCACCCTTGTAATAGCGAGAAGAGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IFMPLLPGESIG*CHPCNSEKRLQ Trigger: CTGAAGTCTCTTCTCGCTATTACAAGGGTGACACCAGCCTATCGACTCTCCAGGAAGCAAGGGCATGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CAA 72 bp | TTCACCATAGGATCAGCATCCTCCAGCTCCAAATTCTaGGGAGCAAACATGGCGAAAGGTATGTCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: FTIGSASSSSKF*GANMAKGMSKL Trigger: GAGTTTGGACATACCTTTCGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATGCTGATCCTATGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | GTCAACAAAGTGATCAATGATAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCTGGTGGACATGAATGC | + |
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Preference number: 6 (lower is better) Translates to: VNKVINDNPHDR*GPLKLPGGHEC Trigger: GCATTCATGTCCACCAGGCAATTTGAGAGGACCCCACCTATCATGGGGATTATCATTGATCACTTTGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS GCA 72 bp | CGTCACAGTCACCTGATTGATGGGTTTGTTGACAAATaGTCCCACTTTTCGGACAAAGATAGTCTCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: RHSHLIDGFVDK*SHFSDKDSLQD Trigger: ATCTTGGAGACTATCTTTGTCCGAAAAGTGGGAGCATTTGTCAACAAACCCATCAATCAGGTGACTGTGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CAA 72 bp | CAAATTTCCAACTCCATAGAATCTCCCTCAGAAGTCTaGAGTGAGATTTCCACACACATAGATCGCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: QISNSIESPSEV*SEISTHIDRPT Trigger: TGTGGGGCGATCTATGTGTGTGGAAATCTCACTCAAGACTTCTGAGGGAGATTCTATGGAGTTGGAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS TCA 72 bp | CACCCTTGTAATAGCGAGAAGAGACTTCAGCAGCAGTaGCAATCGGTTGTATACAGTGTAGGAAACTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HPCNSEKRLQQQ*QSVVYSVGNFD Trigger: ATCAAAGTTTCCTACACTGTATACAACCGATTGTCACTGCTGCTGAAGTCTCTTCTCGCTATTACAAGGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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| CDS CCA 72 bp | GTTCTGAAATTCACGGTAGAAGGTCCCCAAGTCCATTaGAAGAATGTCGTCTTTAGAAAAAGCTGGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: VLKFTVEGPQVH*KNVVFRKSWFK Trigger: TTTAAACCAGCTTTTTCTAAAGACGACATTCTTCCAATGGACTTGGGGACCTTCTACCGTGAATTTCAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028678.9 ENSMUST00000076803.12 |
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