Pregenerated sensors for ATF7IP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039200Ensembl transcript IDs: ENSMUST00000044005.14, ENSMUST00000100191.4, ENSMUST00000117220.8, ENSMUST00000119023.8, ENSMUST00000230872.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAACTGTGCTGTTTAGGCAAAACCTGCAAGCTATTTCTCTCAAATaGTTGCCAGTCAAACAAAAACAAAGACAAAGGATACAAATCAAT | + |
|
Preference number: 1 (lower is better) Translates to: QTVLFRQNLQAISLK*LPVKQKQRQRIQIN Trigger: ATTGATTTGTATCCTTTGTCTTTGTTTTTGTTTGACTGGCAATCATTTGAGAGAAATAGCTTGCAGGTTTTGCCTAAACAGCACAGTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGAAACTGTTATCTCAGAACTTCCACTGTATTCCAGAAGAGTACTCCACTCACAGGAACACACAGTaGCAACATGGGTCCATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: QGKLLSQNFHCIPEEYSTHRNTQ*QHGSMV Trigger: TACCATGGACCCATGTTGCCACTGTGTGTTCCTGTG...AGTGGAGTACTCTTCTGGAATACAGTGGAAGTTCTGAGATAACAGTTTCCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGTAAGCTGGCATTGCCTTTaGCTTCCAAGTGCTGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: KSTPLENYAAVSLFNIPVSWHCL*LPSAGI Trigger: AATGCCAGCACTTGGAAGGCAAAGGCAATGCCAGCT...TACTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCTTATGTAGACCAAGCTaGCATTGCCTTTGCCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CEDGVISNTKGNCYLRTSLCRPS*HCLCLP Trigger: TGGAAGGCAAAGGCAATGCCAGCTTGGTCTACATAA...GGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCGCAGGAAAGAACTTCTaGATGCTGGATATGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRRVLHLKTMLQFHFLTSAGKNF*MLDMTE Trigger: CTCTGTCATATCCAGCATTCAGAAGTTCTTTCCTGC...GGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR TCA 90 bp | AGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCACTGTGAAGAGTACTCCACTTaGAAACTATGCTGCAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RWSHLKYQGKLLSQNFHCEEYST*KLCCSF Trigger: GAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTC...ACAGTGGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR GCA 90 bp | AGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCACTGTTTCACTTCACTTCAGTaGAAAGTATCCATAGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: RWSHLKYQGKLLSQNFHCFTSLQ*KVSIGL Trigger: GAGTCCTATGGATACTTTGCACTGAAGTGAAGTGAA...ACAGTGGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGATACAAATCAATAGCCTGCTTTAGAATGAAAACAGCAGGAAAGAACTTCCAAGAATGGGAAAAGTaGCTGCTTGTATCTGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KGYKSIACFRMKTAGKNFQEWEK*LLVSEG Trigger: GCCCTCAGATACAAGCAGCCACTTTTCCCATTCTTG...GAAGTTCTTTCCTGCTGTTTTCATTCTAAAGCAGGCTATTGATTTGTATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCCCTACCTTTAGCAAATaGTTGGTCTTGCTTATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CEDGVISNTKGNCYLRTSPTFSK*LVLLIA Trigger: AGCTATAAGCAAGACCAACCATTTGCTAAAGGTAGG...GGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCTTATGTAGCTCTGGCTaGATTGGAACTTTTTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: SRRVLHLKTMLQFHFLTSLCSSG*IGTFYV Trigger: TACATAAAAAGTTCCAATCCAGCCAGAGCTACATAA...GGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR GCA 90 bp | ACTCGTCCTCTATTAGAGCCTTTAGTGTTATGTTCTCATAGAAACCAGGAAATTTGTTTAGGCAAAACCTaGAAGCTATTTCTCTCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TRPLLEPLVLCSHRNQEICLGKT*KLFLSN Trigger: ATTTGAGAGAAATAGCTTGCAGGTTTTGCCTAAACA...AATTTCCTGGTTTCTATGAGAACATAACACTAAAGGCTCTAATAGAGGACGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCAAGCTGGCATTGCCTTaGCCTTCCAAGTGCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CEDGVISNTKGNCYLRTSKLALP*PSKCWH Trigger: ATGCCAGCACTTGGAAGGCAAAGGCAATGCCAGCTT...GGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | TTCCATAGCCACCACAGGAACACACAGTGGCAACATGGGTCCATGGTAGGGTATAAGTTGACTTCAGGGTaGAAGATGGGCTTTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FHSHHRNTQWQHGSMVGYKLTSG*KMGFLC Trigger: GCATAGAAAGCCCATCTTTCACCCTGAAGTCAACTT...ATACCCTACCATGGACCCATGTTGCCACTGTGTGTTCCTGTGGTGGCTATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CCA 90 bp | AAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCACTGTGCCATCTCAGGGAGTaGTGCTGGTGGCTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KMESSQIPRETVISELPLCHLRE*CWWLWE Trigger: CTCCCAGAGCCACCAGCACCACTCCCTGAGATGGCA...CAGTGGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR GCA 90 bp | AGACACAGCAGCAATTCCATAGCCACCACAGGAACACACAGTGGCAACATGGGTGAGTTCACCAGCTATTaGTTCATGTCTACTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHSSNSIATTGTHSGNMGEFTSY*FMSTLA Trigger: TGCAAGAGTAGACATGAAGCAATAGCTGGTGAACTC...ACCCATGTTGCCACTGTGTGTTCCTGTGGTGGCTATGGAATTGCTGCTGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGCATCTCAGGGAGTGGTaGTGGTGGCTCTGGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRVLHLKTMLQFHFLTSQHLREW*WWLWER Trigger: CCTCTCCCAGAGCCACCAGCACCACTCCCTGAGATG...CTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR GCA 90 bp | TTCCATAGCCACCACAGGAACACACAGTGGCAACATGGGTCCATGGTAGGGTATAATTCTGAGATAAGGTaGAAGCCATGGGAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FHSHHRNTQWQHGSMVGYNSEIR*KPWEVV Trigger: TACCACTTCCCATGGCTTGCACCTTATCTCAGAATT...ATACCCTACCATGGACCCATGTTGCCACTGTGTGTTCCTGTGGTGGCTATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGTGTCTACTCTTGCACTaGGTCTTCCCAATGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVGGYGLSLESVITQCWCLLLH*VFPMRS Trigger: TGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACA...CCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAACTTCATGTCTACTCTTaGACTGGGTCTTCCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VARGVGGYGLSLESVITQLHVYS*TGSSQC Trigger: GCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAG...TTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCTAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR CCA 90 bp | GCAACATGGGTCCATGGTAGGGTATATATAAAACTAAAGGTAACAGAAGTATATCTCAGGGAGTGGTGCTaGTGGCTCTGGGAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATWVHGRVYIKLKVTEVYLREWC*WLWERW Trigger: CCACCTCTCCCAGAGCCACCAGCACCACTCCCTGAG...ATATACTTCTGTTACCTTTAGTTTTATATATACCCTACCATGGACCCATGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGAGCTTCAACATTCGTTaGCTTGTTCAGGATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGVGGYGLSLESVITQCWSFNIR*LVQDLQ Trigger: TTGGAGATCCTGAACAAGTCAACGAATGTTGAAGCT...CCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGCAAATTCATAGCCTCTaGATCTGTAACCTTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGVGGYGLSLESVITQCWQIHSL*ICNLTD Trigger: GTCTGTAAGGTTACAGATTCAGAGGCTATGAATTTG...CCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR GCA 90 bp | TGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGTTTCCGAGTTCACCAGCTATTaGTTCATGTCTACTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRIWAKFGISDNPMLVSEFTSY*FMSTLA Trigger: TGCAAGAGTAGACATGAAGCAATAGCTGGTGAACTC...GGAAACCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGACTTCGACTTTTAACTaGCTTTTGGGTCACATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGVGGYGLSLESVITQCWTSTFN*LLGHIQ Trigger: TTGAATGTGACCCAAAAGTCAGTTAAAAGTCGAAGT...CCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR GCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCCTTCATGTCTACTCTTaGACTGGGTCTTCCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPLHVYS*TGSSQC Trigger: GCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAG...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCTGTCTACTCTTGCACTaGGTCTTCCCAATGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPCLLLH*VFPMRS Trigger: TGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACA...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCAAGTTGACTTCAGGGTaGAAGATGGGCTTTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPKLTSG*KMGFLC Trigger: GCATAGAAAGCCCATCTTTCACCCTGAAGTCAACTT...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCAACAGCTTTCGAAGTTaGCTTCAGGGTGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPNSFRS*LQGERW Trigger: CCATCTTTCACCCTGAAGTCAACTTCGAAAGCTGTT...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGCTTCATGTCTACTCTTaGACTGGGTCTTCCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVLHLKTMLQFHFLTSQLHVYS*TGSSQC Trigger: GCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAG...CTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGTGTCTACTCTTGCACTaGGTCTTCCCAATGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRVLHLKTMLQFHFLTSQCLLLH*VFPMRS Trigger: TGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACA...CTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCAGCTTCAACATTCGTTaGCTTGTTCAGGATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPSFNIR*LVQDLQ Trigger: TTGGAGATCCTGAACAAGTCAACGAATGTTGAAGCT...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCAACAGCTTTCGAAGTTaGCTTCAGGGTGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRVLHLKTMLQFHFLTSNSFRS*LQGERW Trigger: CCATCTTTCACCCTGAAGTCAACTTCGAAAGCTGTT...GGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | AAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCACTGTGGAAGGTGTTCAAATaGACCAAAACCCTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMESSQIPRETVISELPLWKVFK*TKTLIS Trigger: GGAAATGAGGGTTTTGGTTCATTTGAACACCTTCCA...CAGTGGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGTTGAGTTTAAAGGGGTATaGTTCACAGAAGATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCGRIWAKFGISDNPMLVEFKGV*FTEDIL Trigger: AAGAATATCTTCTGTGAACCATACCCCTTTAAACTC...AACCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR CCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCCTTCAGGGTGAAAGATaGGCTTTCTATGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPLQGER*AFYAVV Trigger: AACTACAGCATAGAAAGCCCATCTTTCACCCTGAAG...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGTAAGCTTCAACATTCGTTaGCTTGTTCAGGATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSTPLENYAAVSLFNIPVSFNIR*LVQDLQ Trigger: TTGGAGATCCTGAACAAGTCAACGAATGTTGAAGCT...TACTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCACTTCGACTTTTAACTaGCTTTTGGGTCACATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPKLKCGSDVFRVKLINPTSTFN*LLGHIQ Trigger: TTGAATGTGACCCAAAAGTCAGTTAAAAGTCGAAGT...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGTACTTCAGGGTGAAAGATaGGCTTTCTATGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSTPLENYAAVSLFNIPVLQGER*AFYAVV Trigger: AACTACAGCATAGAAAGCCCATCTTTCACCCTGAAG...TACTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | ACTCGTCCTCTATTAGAGCCTTTAGTGTTATGTTCTCATAGAAACCAGGAAATTCAAATTCATAGCCTCTaGATCTGTAACCTTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRPLLEPLVLCSHRNQEIQIHSL*ICNLTD Trigger: GTCTGTAAGGTTACAGATTCAGAGGCTATGAATTTG...AATTTCCTGGTTTCTATGAGAACATAACACTAAAGGCTCTAATAGAGGACGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGACTTCGACTTTTAACTaGCTTTTGGGTCACATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRVLHLKTMLQFHFLTSQTSTFN*LLGHIQ Trigger: TTGAATGTGACCCAAAAGTCAGTTAAAAGTCGAAGT...CTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | AAAGGATACAAATCAATAGCCTGCTTTAGAATGAAAACAGCAGGAAAGAACTTCGAGGAAGTGTATCTTTaGTTTTGTCTGCCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGYKSIACFRMKTAGKNFEEVYL*FCLPSQ Trigger: CTGAGATGGCAGACAAAATCAAAGATACACTTCCTC...GAAGTTCTTTCCTGCTGTTTTCATTCTAAAGCAGGCTATTGATTTGTATCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR TCA 90 bp | GCAACATGGGTCCATGGTAGGGTATATATAAAACTAAAGGTAACAGAAGTATATGTAGAAGCTAAATTCTaGGATAAGGTGCAAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ATWVHGRVYIKLKVTEVYVEAKF*DKVQAM Trigger: CATGGCTTGCACCTTATCTCAGAATTTAGCTTCTAC...ATATACTTCTGTTACCTTTAGTTTTATATATACCCTACCATGGACCCATGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CCA 90 bp | AGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCACTGTGAGTTTAAAGGGGTATaGTTCACAGAAGATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RWSHLKYQGKLLSQNFHCEFKGV*FTEDIL Trigger: AAGAATATCTTCTGTGAACCATACCCCTTTAAACTC...ACAGTGGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CAA 90 bp | AGACACAGCAGCAATTCCATAGCCACCACAGGAACACACAGTGGCAACATGGGTGAGCTTCAACATTCGTaGACTTGTTCAGGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RHSSNSIATTGTHSGNMGELQHS*TCSGSP Trigger: TGGAGATCCTGAACAAGTCAACGAATGTTGAAGCTC...ACCCATGTTGCCACTGTGTGTTCCTGTGGTGGCTATGGAATTGCTGCTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGTTTCCAGCTTCATGTCTACTCTaGCACTGGGTCTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VGGYGLSLESVITQCWFPASCLL*HWVFPM Trigger: CATTGGGAAGACCCAGTGCAAGAGTAGACATGAAGC...TGGAAACCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGAGAGTTCACCAGCTATaGCTTCATGTCTACTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVGGYGLSLESVITQCWRVHQL*LHVYSC Trigger: GCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCT...CCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR CAA 90 bp | GTTGCTAGAGGTGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAAGAACTGATCAGGCGATaGTCCGCAGTTTTCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: VARGVGGYGLSLESVITQELIRR*SAVFKT Trigger: GGTTTTGAAAACTGCGGACAATCGCCTGATCAGTTC...TTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACACCTCTAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR CAA 90 bp | TGTGGGAGGATATGGGCTAAGTTTGGAATCAGTGATAACCCAATGCTGGTTTCCGAGCTTCAACATTCGTaGACTTGTTCAGGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGRIWAKFGISDNPMLVSELQHS*TCSGSP Trigger: TGGAGATCCTGAACAAGTCAACGAATGTTGAAGCTC...GGAAACCAGCATTGGGTTATCACTGATTCCAAACTTAGCCCATATCCTCCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100191.4 |
||
| CDS-3UTR CAA 90 bp | ACTCGTCCTCTATTAGAGCCTTTAGTGTTATGTTCTCATAGAAACCAGGAAATTGGCGCACAGTTGGGGTaGACCTTGGGGATGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRPLLEPLVLCSHRNQEIGAQLG*TLGMFH Trigger: ATGGAACATCCCCAAGGTCAACCCCAACTGTGCGCC...AATTTCCTGGTTTCTATGAGAACATAACACTAAAGGCTCTAATAGAGGACGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CAA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCGAGCTTCAACATTCGTaGACTTGTTCAGGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPKLKCGSDVFRVKLINPELQHS*TCSGSP Trigger: TGGAGATCCTGAACAAGTCAACGAATGTTGAAGCTC...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCAGAGTTCACCAGCTATaGCTTCATGTCTACTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CEDGVISNTKGNCYLRTSRVHQL*LHVYSC Trigger: GCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCT...GGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CAA 90 bp | TTTCCTAAGCTGAAATGTGGCTCAGATGTTTTCCGAGTAAAACTCATAAACCCCAGAGTTCACCAGCTATaGCTTCATGTCTACTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FPKLKCGSDVFRVKLINPRVHQL*LHVYSC Trigger: GCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCT...GGGGTTTATGAGTTTTACTCGGAAAACATCTGAGCCACATTTCAGCTTAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117220.8 |
||
| CDS-3UTR CAA 90 bp | GCAACATGGGTCCATGGTAGGGTATATATAAAACTAAAGGTAACAGAAGTATATGCTTCATGTCTACTCTaGCACTGGGTCTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ATWVHGRVYIKLKVTEVYASCLL*HWVFPM Trigger: CATTGGGAAGACCCAGTGCAAGAGTAGACATGAAGC...ATATACTTCTGTTACCTTTAGTTTTATATATACCCTACCATGGACCCATGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS-3UTR CAA 90 bp | AAGATGGAGTCATCTCAAATACCAAGGGAAACTGTTATCTCAGAACTTCCACTGAGTGTATCTTTGATTTaGTCTGCCATCTCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KMESSQIPRETVISELPLSVSLI*SAISGS Trigger: ACTCCCTGAGATGGCAGACAAAATCAAAGATACACT...CAGTGGAAGTTCTGAGATAACAGTTTCCCTTGGTATTTGAGATGACTCCATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS TCA 90 bp | TGGAATATTAGTTCCAACTGTTGTTTTTGGAGCTTCAACATTCGTTaGCTTGTTCAGGATCTCCAACTGCTTCTGGTAACTTGTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WNISSNCCFWSFNIR*LVQDLQLLLVTCRH Trigger: ATGCCTACAAGTTACCAGAAGCAGTTGGAGATCCTGAACAAGTCAACGAATGTTGAAGCTCCAAAAACAACAGTTGGAACTAATATTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGTACTCCACTTGAAAACTATGCTGCAGTTTCACTTTTTAACATCCCAGGGAGGAAGTGTATCTTaGATTTTGTCTGCCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRVLHLKTMLQFHFLTSQGGSVS*ILSAIS Trigger: TGAGATGGCAGACAAAATCAAAGATACACTTCCTCC...CTGGGATGTTAAAAAGTGAAACTGCAGCATAGTTTTCAAGTGGAGTACTCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS TCA 72 bp | AGAGGTGGTAACTCTCCACAGGCGCACAGTTGGGGTTaGCCTTGGGGATGTTCCATGTCAGGGCAATGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RGGNSPQAHSWG*PWGCSMSGQCL Trigger: CAAGCATTGCCCTGACATGGAACATCCCCAAGGTCAACCCCAACTGTGCGCCTGTGGAGAGTTACCACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044005.14 |
||
| CDS TCA 72 bp | CTCTGGATCTGGAATAGCCCCCAAAGGCCCCTGTGTTaGAGGCTTGGTCATCAGCTGATGGTGCTATTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LWIWNSPQRPLC*RLGHQLMVLLG Trigger: TCCCAATAGCACCATCAGCTGATGACCAAGCCTTCAACACAGGGGCCTTTGGGGGCTATTCCAGATCCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230872.2 |
||
| CDS CAA 72 bp | CTTCTTTCTCTTGGTGGAGGGCTTGGTCCCTATCTTTaGCACTCTGGATCTGGAATAGCCCCCAAAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSLGGGLGPYL*HSGSGIAPKGP Trigger: GGGGCCTTTGGGGGCTATTCCAGATCCAGAGTGCAAAAGATAGGGACCAAGCCCTCCACCAAGAGAAAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230872.2 |
||
| CDS CCA 72 bp | CTTTCACAGGAAACTTCTTTCTCTTGGTGGAGGGCTTaGTCCCTATCTTTTGCACTCTGGATCTGGAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSQETSFSWWRA*SLSFALWIWNS Trigger: GCTATTCCAGATCCAGAGTGCAAAAGATAGGGACCAAGCCCTCCACCAAGAGAAAGAAGTTTCCTGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230872.2 |
||
| CDS TCA 72 bp | TTGATCTTAAAACAGCTTTCGAAGTTGACTTCAGGGTaGAAGATGGGCTTTCTATGCTGTAGTTGGACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LILKQLSKLTSG*KMGFLCCSWTG Trigger: GCCCGTCCAACTACAGCATAGAAAGCCCATCTTTCACCCTGAAGTCAACTTCGAAAGCTGTTTTAAGATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044005.14 ENSMUST00000117220.8 |
||
| CDS GCA 72 bp | CAAAGAGTTCACCAGCTATTGCTTCATGTCTACTCTTaGACTGGGTCTTCCCAATGCGTTCATTCAATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QRVHQLLLHVYS*TGSSQCVHSIH Trigger: ATGAATTGAATGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS CCA 72 bp | AGTTCACCAGCTATTGCTTCATGTCTACTCTTGCACTaGGTCTTCCCAATGCGTTCATTCAATTCATTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPAIASCLLLH*VFPMRSFNSFS Trigger: ACTGAATGAATTGAATGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAGCAATAGCTGGTGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS CCA 72 bp | TTTCTTTTTCTTTCACAGGAAACTTCTTTCTCTTGGTaGAGGGCTTGGTCCCTATCTTTTGCACTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FLFLSQETSFSW*RAWSLSFALWI Trigger: GATCCAGAGTGCAAAAGATAGGGACCAAGCCCTCCACCAAGAGAAAGAAGTTTCCTGTGAAAGAAAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230872.2 |
||
| CDS CAA 72 bp | ACAAAGAGTTCACCAGCTATTGCTTCATGTCTACTCTaGCACTGGGTCTTCCCAATGCGTTCATTCAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: TKSSPAIASCLL*HWVFPMRSFNS Trigger: TGAATTGAATGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS TCA 72 bp | AGTTCCAACTGTTGTTTTTGGAGCTTCAACATTCGTTaGCTTGTTCAGGATCTCCAACTGCTTCTGGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: SSNCCFWSFNIR*LVQDLQLLLVT Trigger: AGTTACCAGAAGCAGTTGGAGATCCTGAACAAGTCAACGAATGTTGAAGCTCCAAAAACAACAGTTGGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS CAA 72 bp | GAAGTCTTCTTATTTTTACAAAGAGTTCACCAGCTATaGCTTCATGTCTACTCTTGCACTGGGTCTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: EVFLFLQRVHQL*LHVYSCTGSSQ Trigger: TTGGGAAGACCCAGTGCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCTTTGTAAAAATAAGAAGACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS CAA 90 bp | CTTATTTTTACAAAGAGTTCACCAGCTATTGCTTCATGTCTACTCTaGCACTGGGTCTTCCCAATGCGTTCATTCAATTCATTCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LIFTKSSPAIASCLL*HWVFPMRSFNSFSF Trigger: AAAACTGAATGAATTGAATGAACGCATTGGGAAGACCCAGTGCAAGAGTAGACATGAAGCAATAGCTGGTGAACTCTTTGTAAAAATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044005.14 ENSMUST00000100191.4 ENSMUST00000117220.8 ENSMUST00000119023.8 |
||
| CDS GCA 72 bp | ATTTACTTAGAAAGATGTAAAAACATCCTTTACCTATaGTGTAGTTGGACGGGCCTTCTCTTGTCAAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: IYLERCKNILYL*CSWTGLLLSSQ Trigger: TTGACTTGACAAGAGAAGGCCCGTCCAACTACAGCATAGGTAAAGGATGTTTTTACATCTTTCTAAGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119023.8 |
||