Pregenerated sensors for ATF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026663Ensembl transcript IDs: ENSMUST00000027974.7
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCGTGTGCTGCCTCTGTCCACAGCCACAGTCACATCCTCGTGTTaGGCTGCTTCACAGGCAGGAAGGACATGGCCACAGGGTAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: MRVLPLSTATVTSSC*AASQAGRTWPQGSP Trigger: TGGGCTACCCTGTGGCCATGTCCTTCCTGCCTGTGAAGCAGCTCAACACGAGGATGTGACTGTGGCTGTGGACAGAGGCAGCACACGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR TCA 90 bp | TGGCACCCATTAGAGGACCAGCCCCCGGGACAAACAGGTCTTGTCTaGAAATCACCCGAGAGCCAATCAGGATGGACTGCGGCACTGAAT | + |
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Preference number: 1 (lower is better) Translates to: WHPLEDQPPGQTGLV*KSPESQSGWTAALN Trigger: ATTCAGTGCCGCAGTCCATCCTGATTGGCTCTCGGGTGATTTTCAGACAAGACCTGTTTGTCCCGGGGGCTGGTCCTCTAATGGGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | CTCCTTGGATCCCTGACCTGTGCTGTGGCCACCTTAACTTCTGTCTaGTCTTTGGCTGTGCCTTCCAACGGTCATCCCCACTGTTACCTG | + |
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Preference number: 1 (lower is better) Translates to: LLGSLTCAVATLTSV*SLAVPSNGHPHCYL Trigger: CAGGTAACAGTGGGGATGACCGTTGGAAGGCACAGCCAAAGAGCAGACAGAAGTTAAGGTGGCCACAGCACAGGTCAGGGATCCAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | TCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTGCTTaGCGAAGAGGCAGAGAGCAGCATCTTCACCAGCTCTTCAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: SLPLPLELRTRQVSA*RRGREQHLHQLFSL Trigger: GAGACTGAAGAGCTGGTGAAGATGCTGCTCTCTGCCTCTTCGGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | GTTCTCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTaGTTGCCGAAGAGGCAGAGAGCAGCATCTTCACCAGCTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: VLSSSSPGVAYKASL*LPKRQRAASSPALQ Trigger: CTGAAGAGCTGGTGAAGATGCTGCTCTCTGCCTCTTCGGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | GCAGATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTaGTGCCTCTGTCCACAGCCACAGTCACATCCTCGTGTTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: ADSIRVSADQHQECV*CLCPQPQSHPRVEL Trigger: CAGCTCAACACGAGGATGTGACTGTGGCTGTGGACAGAGGCAGCACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | GATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTGCTaGCTCTGTCCACAGCCACAGTCACATCCTCGTGTTGAGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: DSIRVSADQHQECVC*LCPQPQSHPRVELL Trigger: AAGCAGCTCAACACGAGGATGTGACTGTGGCTGTGGACAGAGGCAGCACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CCA 90 bp | AGGCAGGAAGGACATGGCCACAGGGTAGCCCACCTCCCCCACAAATaGCTACTCCTAAAGGTACTCCATGTATTTGGTATCTTCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: RQEGHGHRVAHLPHK*LLLKVLHVFGIFSL Trigger: CAAGGAGAAGATACCAAATACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGGCCATGTCCTTCCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CCA 90 bp | GAGTTAGGGGTTATGGGCTGTGTCATGGGTGTTAGGAATGGAACTTaGGTCTCCTGGAGATGCAGCAAGAGCTCTCAGCAGTTGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: ELGVMGCVMGVRNGT*VSWRCSKSSQQLSH Trigger: ATGGCTCAACTGCTGAGAGCTCTTGCTGCATCTCCAGGAGACCCAAGTTCCATTCCTAACACCCATGACACAGCCCATAACCCCTAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR TCA 90 bp | TACAGGTCACATGTGGAAGTTGAGGTGTATGTACCTGCTGAAGGATaGGGTCAATGCTCCCAGGCTGAGGTGGAAAGAAGGCTATCACGG | + |
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Preference number: 1 (lower is better) Translates to: YRSHVEVEVYVPAEG*GQCSQAEVERRLSR Trigger: CCGTGATAGCCTTCTTTCCACCTCAGCCTGGGAGCATTGACCTCATCCTTCAGCAGGTACATACACCTCAACTTCCACATGTGACCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR TCA 90 bp | CTGCACCAGGAAGTGCAGTGGACAGAAGAGGAAGTGGGTCTGACCTaGAGGAAGATAACTGAGAACCAAACACACATTGAGAAAAGCACT | + |
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Preference number: 1 (lower is better) Translates to: LHQEVQWTEEEVGLT*RKITENQTHIEKST Trigger: AGTGCTTTTCTCAATGTGTGTTTGGTTCTCAGTTATCTTCCTTCAGGTCAGACCCACTTCCTCTTCTGTCCACTGCACTTCCTGGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | TATCATCTTTCCACTGGAAAAACTGAGAACTTCACCATACTGTGCTaGAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTC | + |
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Preference number: 1 (lower is better) Translates to: YHLSTGKTENFTILC*SFSGKPCLLCALLV Trigger: GACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGCAGCACAGTATGGTGAAGTTCTCAGTTTTTCCAGTGGAAAGATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | AGCAGTCTTCCATCTAAGCTACATACCCCATCCACCATGGGTCTATaGTCATTTAAACCTCTGGCTTCACTGCCCCTCATTACCATGATG | + |
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Preference number: 1 (lower is better) Translates to: SSLPSKLHTPSTMGL*SFKPLASLPLITMM Trigger: CATCATGGTAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCATAGACCCATGGTGGATGGGGTATGTAGCTTAGATGGAAGACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR GCA 90 bp | CTTTATCATCTTTCCACTGGAAAAACTGAGAACTTCACCATACTGTaGTGCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LYHLSTGKTENFTIL*CSFSGKPCLLCALL Trigger: CAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGCAGCACAGTATGGTGAAGTTCTCAGTTTTTCCAGTGGAAAGATGATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CCA 90 bp | TCTAAGCAAGCAGTCTTCCATCTAAGCTACATACCCCATCCACCATaGGTCTATGCTCATTTAAACCTCTGGCTTCACTGCCCCTCATTA | + |
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Preference number: 1 (lower is better) Translates to: SKQAVFHLSYIPHPP*VYAHLNLWLHCPSL Trigger: TAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCATAGACCCATGGTGGATGGGGTATGTAGCTTAGATGGAAGACTGCTTGCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR TCA 90 bp | GCAGAAGTCGGACTGGAAGTTTTTGATGTGGGAGGAAGTCAACCGTaGTTCCTAGTTTTGTTGCTGTGGTACATTTCTGTCAAGTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: AEVGLEVFDVGGSQP*FLVLLLWYISVKFH Trigger: ATGAAACTTGACAGAAATGTACCACAGCAACAAAACTAGGAATCACGGTTGACTTCCTCCCACATCAAAAACTTCCAGTCCGACTTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCACTCTTCCCCTGGAGTTaGGTACAAGGCAAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PGDTAHRAALPPENCSLALFPWS*VQGKSL Trigger: CAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAG...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CAA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTaGAGCAGTCCTCCCCAGCTCCTTGGATCCCTGACCTGTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PDGQQEQRRQASRLV*SSPPQLLGSLTCAV Trigger: CACAGCACAGGTCAGGGATCCAAGGAGCTGGGGAGGACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | TGTATGTACCTGCTGAAGGATGAGGTCAATGCTCCCAGGCTGAGGTGGAAAGAAGGAGGGGTGTTGTGGTaGTGGGGGCACCTCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: CMYLLKDEVNAPRLRWKEGGVLW*WGHLHE Trigger: CTCATGGAGGTGCCCCCATCACCACAACACCCCTCC...TTCTTTCCACCTCAGCCTGGGAGCATTGACCTCATCCTTCAGCAGGTACATACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CAA 90 bp | CTCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTGCTaGCCGAAGAGGCAGAGAGCAGCATCTTCACCAGCTCTTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSSSSPGVAYKASLC*PKRQRAASSPALQS Trigger: AGACTGAAGAGCTGGTGAAGATGCTGCTCTCTGCCTCTTCGGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCATCTAAGCTACTGGAATGGGACCACCTaGCAATGGCAAGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EGSHGFGHSKQAVFHLSYWNGTT*QWQASW Trigger: CCAGCTGGCTTGCCATTGTCAGGTGGTCCCATTCCA...GTAGCTTAGATGGAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CAA 90 bp | GAGCTCTCAGCAGTTGAGCCATCTGGCCAGCCCAGGGTCTACTTCTaGCTAATGAGAAAGAAAGGCAAAGGGGACAGCTTTGTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ELSAVEPSGQPRVYF*LMRKKGKGDSFVLL Trigger: CAGCAGCACAAAGCTGTCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGATGGCTCAACTGCTGAGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGGTAGCCCACCTCCCCCACAAATGGCTACTCCTAAAGGTACTCCATGTGGCTGCTTGCTATGGTaGAGGAAGCAGGCAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: PQGSPPPPQMATPKGTPCGCLLW*RKQAKY Trigger: GTATTTTGCCTGCTTCCTTCACCATAGCAAGCAGCC...ACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAAGAGGCAGCACATGACTaGCATGAGTCCTGGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: QPLATLPNITVPSAQGTKEAAHD*HESWHP Trigger: TGGATGCCAGGACTCATGTCAGTCATGTGCTGCCTC...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGACCTGTGCTGTGGCCACCTTAACTTCTGTCTGCTCTTTGGCTGTGCCTGCTGGGAAGAGTCTATaGGAACCTGCTGAAATCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLTCAVATLTSVCSLAVPAGKSL*EPAEIL Trigger: CAGGATTTCAGCAGGTTCTCATAGACTCTTCCCAGC...AGGCACAGCCAAAGAGCAGACAGAAGTTAAGGTGGCCACAGCACAGGTCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGGTAGCCCACCTCCCCCACAAATGGCTACTCCTAAAGGTACTCCATGTTTCTCTGGGAAGCCATaGTTGCTCTGTGCACTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PQGSPPPPQMATPKGTPCFSGKP*LLCALL Trigger: CAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAA...ACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCAGGAATGCGTGTGCTaGCTCTGTCCACAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFQECVC*LCPQPQ Trigger: CTGTGGCTGTGGACAGAGGCAGCACACGCATTCCTG...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAACATCAGGAATGCGTGTaGTGCCTCTGTCCACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QPLATLPNITVPSAQGTKHQECV*CLCPQP Trigger: TGGCTGTGGACAGAGGCAGCACACGCATTCCTGATG...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGACATGTTCCACCCCACTaGGTGGACGGTGACAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IWPAQGLLLANEKERQRGHVPPH*VDGDKQ Trigger: CTGCTTGTCACCGTCCACCCAGTGGGGTGGAACATG...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAATACTGCACCAGGAAGTaGAGTGGACAGAAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AASLGSHACSVHCWSLREYCTRK*SGQKRK Trigger: CTTCCTCTTCTGTCCACTGCACTTCCTGGTGCAGTA...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCTGGGTCTCCTGGAGATaGAGCAAGAGCTCTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFWVSWR*SKSSQQ Trigger: CTGCTGAGAGCTCTTGCTGCATCTCCAGGAGACCCA...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCATCTAAGCTACGCTTTCTTCATCTCCTaGATCCTGGCAACTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: EGSHGFGHSKQAVFHLSYAFFIS*ILATAQ Trigger: CTGGGCAGTTGCCAGGATGCAGGAGATGAAGAAAGC...GTAGCTTAGATGGAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCATCTAAGCTACGCTTTTCCTCTCCAATaGGCCTGTGCTAGCGCACAA | + |
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Preference number: 2 (lower is better) Translates to: EGSHGFGHSKQAVFHLSYAFPLQ*ACASAQ Trigger: TTGTGCGCTAGCACAGGCCCATTGGAGAGGAAAAGC...GTAGCTTAGATGGAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CAA 90 bp | CTGTGCTGCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTaGGTCCTTAAGGGAAACTCTCTAGTCTTGCTTAAGCCTAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LCCSFSGKPCLLCAL*VLKGNSLVLLKPSD Trigger: GTCACTAGGCTTAAGCAAGACTAGAGAGTTTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGCAGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTCACCATACTGTGCTaGAGCTTCTCTGGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QPLATLPNITVPSAQGTKFTILC*SFSGKP Trigger: TGGCTTCCCAGAGAAGCTGCAGCACAGTATGGTGAA...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | TGTATGTACCTGCTGAAGGATGAGGTCAATGCTCCCAGGCTGAGGTGGAAAGAAAACCTGCTGAAATCCTaGGAAGGGAGGCAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: CMYLLKDEVNAPRLRWKENLLKS*EGRQHM Trigger: CATGTGCTGCCTCCCTTCCCAGGATTTCAGCAGGTT...TTCTTTCCACCTCAGCCTGGGAGCATTGACCTCATCCTTCAGCAGGTACATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGACTTCTGTCTGCTCTTTaGCTGTGCCTTCCAACGGTC | + |
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Preference number: 2 (lower is better) Translates to: IWPAQGLLLANEKERQRGLLSAL*LCLPTV Trigger: GACCGTTGGAAGGCACAGCCAAAGAGCAGACAGAAG...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR CAA 90 bp | GAGAACTTCACCATACTGTGCTGCAGCTTCTCTGGGAAGCCATGCTaGCTCTGTGCACTGTTGGTCCTTAAGGGAAACTCTCTAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ENFTILCCSFSGKPC*LCALLVLKGNSLVL Trigger: CAAGACTAGAGAGTTTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGCAGCACAGTATGGTGAAGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAAGAAGTGGGTCTGACCTaGAGGAAGATAACTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QPLATLPNITVPSAQGTKEVGLT*RKITEN Trigger: GTTCTCAGTTATCTTCCTTCAGGTCAGACCCACTTC...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCAGCAAGAATGGCCCTaGCCTGAAAACATCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFQQEWP*PENISP Trigger: AGGTGAGATGTTTTCAGGGCAGGGCCATTCTTGCTG...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAAACCTTAACTTCTGTCTaGTCTTTGGCTGTGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QPLATLPNITVPSAQGTKTLTSV*SLAVPS Trigger: GGAAGGCACAGCCAAAGAGCAGACAGAAGTTAAGGT...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCTTACATTCCACCACTaGCCTTCCCTTCCCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFLTFHH*PSLPLS Trigger: AGACAAGGGAAGGGAAGGCCAGTGGTGGAATGTAAG...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTTTGTGCTTACTGGAATaGGACCACCTGACAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: PDGQQEQRRQASRLVLSSLCLLE*DHLTMA Trigger: TGCCATTGTCAGGTGGTCCCATTCCAGTAAGCACAA...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTTTGGTATCTTCTCCTTaGCACCCATTAGAGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: PDGQQEQRRQASRLVLSSLVSSP*HPLEDQ Trigger: CTGGTCCTCTAATGGGTGCCAAGGAGAAGATACCAA...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR CCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCGTTAGGAATGGAACTTaGGTCTCCTGGAGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFVRNGT*VSWRCS Trigger: GCTGCATCTCCAGGAGACCCAAGTTCCATTCCTAAC...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR GCA 90 bp | CACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTATCTAGTAACAGGTTTCACAGGAGTATaGTCTGGGCTGAGGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: HFPTSQYHQPRAQNYLVTGFTGV*SGLRVH Trigger: GTGGACCCTCAGCCCAGAGCATACTCCTGTGAAACC...TGTTACTAGATAATTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| 3UTR-3UTR TCA 90 bp | CATCCGTTCTCATCACCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGGGTAATGACAGGACCTaGTGGTCAGCAGGAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HPFSSPPNLKVGFHSILRGNDRT*WSAGAE Trigger: CTCTGCTCCTGCTGACCATCAGGTCCTGTCATTACC...CCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGGTGATGAGAACGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTATCTAGTAACACCTTTCCCTCATTTCTaGAACTCTCCCCTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HFPTSQYHQPRAQNYLVTPFPHF*NSPLRR Trigger: CCTCCTCAGGGGAGAGTTTCAGAAATGAGGGAAAGG...TGTTACTAGATAATTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGCAGCTCTTCAGTCTCTaGTGTCCAGCGCAGCTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: PPNLKVGFHSILRKLFYEQLFSL*CPAQLG Trigger: CCCGAGCTGCGCTGGACAGCAGAGACTGAAGAGCTG...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAGGTGGGTTCTTTATATAGCTTTAGCTGTCCTGTCCTGGAATTTGAAATGCCCACAGGGCTGCACTaGCACCAGAGAATTGCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: FEVGSLYSFSCPVLEFEMPTGLH*HQRIAR Trigger: GCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGG...CATTTCAAATTCCAGGACAGGACAGCTAAAGCTATATAAAGAACCCACCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTTGTTTTGACTCTTTGTaGGATGTTTTTGGCTGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: PDGQQEQRRQASRLVLSSCFDSL*DVFGCS Trigger: CGAGCAGCCAAAAACATCCCACAAAGAGTCAAAACA...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | CATCCGTTCTCATCACCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGGTGCTGCAGCTTCTCTaGGAAGCCATGCTTGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HPFSSPPNLKVGFHSILRVLQLL*EAMLAL Trigger: CAGAGCAAGCATGGCTTCCCAGAGAAGCTGCAGCAC...CCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGGTGATGAGAACGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCTTACAGTCTCACAGTaGAACTGTGGGAGTTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFLTVSQ*NCGSCL Trigger: AAGACAACTCCCACAGTTCCACTGTGAGACTGTAAG...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTATCTAGTAACAGTGTGGCTCACTCTGTaGCCCCCACAACAGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: HFPTSQYHQPRAQNYLVTVWLTL*PPQQLF Trigger: AAATAACTGTTGTGGGGGTCACAGAGTGAGCCACAC...TGTTACTAGATAATTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTTGGCATCCATTTCTGTaGACTTGTAACGTACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: PDGQQEQRRQASRLVLSSWHPFL*TCNVQC Trigger: ACATTGTACGTTACAAGTTCACAGAAATGGATGCCA...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTATCTAGTAACAAGAATGGCCCTGCCCTaGAAACATCTCACCTTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HFPTSQYHQPRAQNYLVTRMALP*KHLTLA Trigger: AGCTAAGGTGAGATGTTTTCAGGGCAGGGCCATTCT...TGTTACTAGATAATTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGTCTGAAACTCTCCCCTaGGGAGGGCCCCATTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PPNLKVGFHSILRKLFYESETLP*GGPHSS Trigger: TGAGGAATGGGGCCCTCCTCAGGGGAGAGTTTCAGA...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCTGAACACATGTATGTaGACCATTATGTGTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFLNTCM*TIMCVW Trigger: CCAGACACACATAATGGTGCACATACATGTGTTCAG...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | TTACCAACTGGAGATAATCCCTTTACCCAAACTCTAAACTGTTTTGACTCTTTGTTCCACCCCACTGGGTaGACGGTGACAAGCAGCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LPTGDNPFTQTLNCFDSLFHPTG*TVTSSA Trigger: TGCGCTGCTTGTCACCGTCCACCCAGTGGGGTGGAA...CAAAGAGTCAAAACAGTTTAGAGTTTGGGTAAAGGGATTATCTCCAGTTGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 90 bp | GGGAATATGCTACACTTCCTGCTTCATTTCACTATAGTCACCAGCTaGACGGAGGACAAAAAGCCCACCAGTGTGTTATTTGTTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: GNMLHFLLHFTIVTS*TEDKKPTSVLFVDL Trigger: GAGGTCAACAAATAACACACTGGTGGGCTTTTTGTCCTCCGTCAAGCTGGTGACTATAGTGAAATGAAGCAGGAAGTGTAGCATATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGGTCACATCCTCGTGTTaGGCTGCTTCACAGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PPNLKVGFHSILRKLFYEVTSSC*AASQAG Trigger: TCCTGCCTGTGAAGCAGCTCAACACGAGGATGTGAC...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | CACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTATCTAGTAACATTTGATCTGAGGCACTaGTACACTGGAGTCACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HFPTSQYHQPRAQNYLVTFDLRH*YTGVTA Trigger: TGCAGTGACTCCAGTGTACCAGTGCCTCAGATCAAA...TGTTACTAGATAATTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGGTGGGTTCTTTATATAGCTTTAGCTGTCCTGTCCTGGAATTTGAAATGCTCTTCCTCTTCCCCTaGAGTTGCGTACAAGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FEVGSLYSFSCPVLEFEMLFLFP*SCVQGK Trigger: CTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAG...CATTTCAAATTCCAGGACAGGACAGCTAAAGCTATATAAAGAACCCACCTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | TATATTAGCGTTTTGCCTGAACACATGTATGTGCACCATTATGTGTGTCTGGTGGAGAGCCAATCAGGATaGACTGCGGCACTGAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: YISVLPEHMYVHHYVCLVESQSG*TAALNS Trigger: TGAATTCAGTGCCGCAGTCCATCCTGATTGGCTCTC...CACCAGACACACATAATGGTGCACATACATGTGTTCAGGCAAAACGCTAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGAGGCAAAAGATGACCTaGCTGTGTGTCACTCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PPNLKVGFHSILRKLFYERQKMT*LCVTPC Trigger: ACAAGGAGTGACACACAGTCAGGTCATCTTTTGCCT...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR GCA 90 bp | CACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAATTATCTAGTAACAATATCAAACAAAGCCTaGCTTTCCTTCCAAATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HFPTSQYHQPRAQNYLVTISNKA*LSFQMV Trigger: CACCATTTGGAAGGAAAGGCAGGCTTTGTTTGATAT...TGTTACTAGATAATTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | CATCCGTTCTCATCACCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAAATGAGACCTGAATaGCTGCTTACTTTGCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HPFSSPPNLKVGFHSILRKMRPE*LLTLLP Trigger: TGGGAGCAAAGTAAGCAGCCATTCAGGTCTCATTTT...CCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGGTGATGAGAACGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | TATATTAGCGTTTTGCCTGAACACATGTATGTGCACCATTATGTGTGTCTGGTGTTCCACTGGAAAAACTaGGAACTTCACCATACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: YISVLPEHMYVHHYVCLVFHWKN*ELHHTV Trigger: CACAGTATGGTGAAGTTCTCAGTTTTTCCAGTGGAA...CACCAGACACACATAATGGTGCACATACATGTGTTCAGGCAAAACGCTAATATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CCA 90 bp | TATATTAGCGTTTTGCCTGAACACATGTATGTGCACCATTATGTGTGTCTGGTGTTAGCTGTCCTGTCCTaGAATTTGAAATGTAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YISVLPEHMYVHHYVCLVLAVLS*NLKCRP Trigger: TGGCCTACATTTCAAATTCCAGGACAGGACAGCTAA...CACCAGACACACATAATGGTGCACATACATGTGTTCAGGCAAAACGCTAATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | TGCTCATTTAAACCTCTGGCTTCACTGCCCCTCATTACCATGATGAGAAGAAAAGTGTTTAAATACATATaGAAATGGAGTCACTTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: CSFKPLASLPLITMMRRKVFKYI*KWSHFP Trigger: GGGGAAGTGACTCCATTTTCATATGTATTTAAACAC...TTTTCTTCTCATCATGGTAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGTACAAATCTCTTTACTaGACCAGGAAGTGCAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PPNLKVGFHSILRKLFYEYKSLY*TRKCSG Trigger: TCCACTGCACTTCCTGGTGCAGTAAAGAGATTTGTA...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAGGTGGGTTCTTTATATAGCTTTAGCTGTCCTGTCCTGGAATTTGAAATGCATTCAGAATGGATTTaGACCAAAGGAGAGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FEVGSLYSFSCPVLEFEMHSEWI*TKGERK Trigger: CTTTCTCTCTCCTTTGGTTCAAATCCATTCTGAATG...CATTTCAAATTCCAGGACAGGACAGCTAAAGCTATATAAAGAACCCACCTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | GACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTaGTCGCTAGCATGTTCCACCCCACTGGGTGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: DTAHRAALPPEN*SLACSTPLGGR Trigger: CCGTCCACCCAGTGGGGTGGAACATGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | GAGCAGTCCTCCCCAGCTCCTTGGATCCCTGACCTGTaGTGTGGCCACCTTAACTTCTGTCTGCTCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EQSSPAPWIPDL*CGHLNFCLLFG Trigger: GCCAAAGAGCAGACAGAAGTTAAGGTGGCCACAGCACAGGTCAGGGATCCAAGGAGCTGGGGAGGACTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAATGGCCTTCCCTTCCCTaGTCTCCAGTGTGTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AASLGSHACSVHCWSLREWPSLP*SPVCGS Trigger: TGAGCCACACACTGGAGACAAGGGAAGGGAAGGCCA...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | TTAGAGGACCAGCCCCCGGGACAAACAGGTCTTGTCTaGAAATCACCCGAGAGCCAATCAGGATGGACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: LEDQPPGQTGLV*KSPESQSGWTA Trigger: CGCAGTCCATCCTGATTGGCTCTCGGGTGATTTTCAGACAAGACCTGTTTGTCCCGGGGGCTGGTCCTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | CGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTGCTaGCTCTGTCCACAGCCACAGTCACATCCTCGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RVSADQHQECVC*LCPQPQSHPRV Trigger: AACACGAGGATGTGACTGTGGCTGTGGACAGAGGCAGCACACGCATTCCTGATGCTGATCTGCTGAGACACG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CCA 72 bp | AGAGAATTGCTCGCTAGCATGTTCCACCCCACTGGGTaGACGGTGACAAGCAGCGCACTTCCTGTTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RELLASMFHPTG*TVTSSALPVLS Trigger: AGAGAGAACAGGAAGTGCGCTGCTTGTCACCGTCCACCCAGTGGGGTGGAACATGCTAGCGAGCAATTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | AGATGGCAGCAGTGCTGTCCAGGGAACAGTTGTTGGTaGACAGTGCCAGGCATAATGGGGCCACAGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RWQQCCPGNSCW*TVPGIMGPQAK Trigger: TTTTGCCTGTGGCCCCATTATGCCTGGCACTGTTCACCAACAACTGTTCCCTGGACAGCACTGCTGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | CCAAGTCCCTTTGCTGAGTCTGGTTTCACAGGAGTATaGTCTGGGCTGAGGGTCCACAATGAGAGGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSPFAESGFTGV*SGLRVHNERQA Trigger: TGCTTGCCTCTCATTGTGGACCCTCAGCCCAGAGCATACTCCTGTGAAACCAGACTCAGCAAAGGGACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGACTGTCCAGGGAACAGTaGTTGGTGAACAGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IWPAQGLLLANEKERQRGLSREQ*LVNSAR Trigger: CCTGGCACTGTTCACCAACAACTGTTCCCTGGACAG...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGAGACCTCCAAGTCCCTTaGCTGAGTCTGGTTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: IWPAQGLLLANEKERQRGDLQVP*LSLVSQ Trigger: CTGTGAAACCAGACTCAGCAAAGGGACTTGGAGGTC...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | TCTTGCTTAAGCCTAGTGACCTCCAAGTCCCTTTGCTaGGTCTGGTTTCACAGGAGTATGCTCTGGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCLSLVTSKSLC*VWFHRSMLWAE Trigger: CTCAGCCCAGAGCATACTCCTGTGAAACCAGACTCAGCAAAGGGACTTGGAGGTCACTAGGCTTAAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | CATGTGGAAGTTGAGGTGTATGTACCTGCTGAAGGATaGGGTCAATGCTCCCAGGCTGAGGTGGAAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVEVEVYVPAEG*GQCSQAEVERR Trigger: CCTTCTTTCCACCTCAGCCTGGGAGCATTGACCTCATCCTTCAGCAGGTACATACACCTCAACTTCCACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | GATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATaGGTGTGCTGCCTCTGTCCACAGCCACAGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: DSIRVSADQHQE*VCCLCPQPQSH Trigger: ATGTGACTGTGGCTGTGGACAGAGGCAGCACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CCA 72 bp | ATGAAAATGGAGTCACTTCCCCTTACATTCCACCACTaGCCTTCCCTTCCCTTGTCTCCAGTGTGTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MKMESLPLTFHH*PSLPLSPVCGS Trigger: TGAGCCACACACTGGAGACAAGGGAAGGGAAGGCCAGTGGTGGAATGTAAGGGGAAGTGACTCCATTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCACTGCAGATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTACTGCCACCAGAGAATaGCTCGCTAGCATGTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ESLQILFVSQQISIRNACTATRE*LASMFH Trigger: GTGGAACATGCTAGCGAGCAATTCTCTGGTGGCAGT...ACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATCTGCAGTGACTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | AACAGTGCCAGGCATAATGGGGCCACAGGCAAAAGATaGCCTGACTGTGTGTCACTCCTTGTAGAGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSARHNGATGKR*PDCVSLLVERR Trigger: TCTTCTCTCTACAAGGAGTGACACACAGTCAGGTCATCTTTTGCCTGTGGCCCCATTATGCCTGGCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | GCCGGTGGCAATAAGCTACTCTCAAGTCTGGGACTATaGGGAGAGCTTGGGAAGTTGATTCTTATGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGGNKLLSSLGL*GELGKLILMTE Trigger: CTCTGTCATAAGAATCAACTTCCCAAGCTCTCCGCATAGTCCCAGACTTGAGAGTAGCTTATTGCCACCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | GTAGTGGGCACCAGGGAGGAAATGTCTCTTTCCAAGTaGTATCAGGGTGGGAATGACAATGTCCTCAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: VVGTREEMSLSK*YQGGNDNVLNP Trigger: TGGATTGAGGACATTGTCATTCCCACCCTGATAGCACTTGGAAAGAGACATTTCCTCCCTGGTGCCCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | AAGTCTGTAATGCTTAAAGCTAGCCAAGCACAGGGTTaGTTTGTGACACTGGCTGGCCATGCCATGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KSVMLKASQAQG*FVTLAGHAMTH Trigger: GTGAGTCATGGCATGGCCAGCCAGTGTCACAAAGCAACCCTGTGCTTGGCTAGCTTTAAGCATTACAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | CTTTCCACTGGAAAAACTGAGAACTTCACCATACTGTaGTGCAGCTTCTCTGGGAAGCCATGCTTGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSTGKTENFTIL*CSFSGKPCLLC Trigger: ACAGAGCAAGCATGGCTTCCCAGAGAAGCTGCAGCACAGTATGGTGAAGTTCTCAGTTTTTCCAGTGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | CCATCTAAGCTACATACCCCATCCACCATGGGTCTATaGTCATTTAAACCTCTGGCTTCACTGCCCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: PSKLHTPSTMGL*SFKPLASLPLI Trigger: AATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCATAGACCCATGGTGGATGGGGTATGTAGCTTAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | GCTGTCCTGTCCTGGAATTTGAAATGTAGGCCAGGCTaGTATCAAACAAAGCCTGCCTTTCCTTCCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: AVLSWNLKCRPG*YQTKPAFPSKW Trigger: CCATTTGGAAGGAAAGGCAGGCTTTGTTTGATATCAGCCTGGCCTACATTTCAAATTCCAGGACAGGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | GCCTTAGCAAACGTGACACTATTGAGGTCTTTGATCTaGGGCACTGGTACACTGGAGTCACTGCAGATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ALANVTLLRSLI*GTGTLESLQIL Trigger: TAGAATCTGCAGTGACTCCAGTGTACCAGTGCCTCAGATCAAAGACCTCAATAGTGTCACGTTTGCTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | CAAAGAGAGCAGTGCTTTGTAGCTTTCTTCATCTCCTaGATCCTGGCAACTGCCCAGAAAGTAGAGGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: QREQCFVAFFIS*ILATAQKVEVI Trigger: TATCACCTCTACTTTCTGGGCAGTTGCCAGGATGCAGGAGATGAAGAAAGCTACAAAGCACTGCTCTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CCA 72 bp | TACTTTGCTCCCAGGACAACAGCTTTTCCTCTCCAATaGGCCTGTGCTAGCGCACAAACATTAAGATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: YFAPRTTAFPLQ*ACASAQTLRYK Trigger: TTTGTATCTTAATGTTTGTGCGCTAGCACAGGCCCATTGGAGAGGAAAAGCTGTTGTCCTGGGAGCAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | GGACTGGAAGTTTTTGATGTGGGAGGAAGTCAACCGTaGTTCCTAGTTTTGTTGCTGTGGTACATTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLEVFDVGGSQP*FLVLLLWYISV Trigger: GACAGAAATGTACCACAGCAACAAAACTAGGAATCACGGTTGACTTCCTCCCACATCAAAAACTTCCAGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | GGAAATGTCTCTTTCCAAGTGCTATCAGGGTGGGAATaGCAATGTCCTCAATCCATTATCTTCCTTCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GNVSFQVLSGWE*QCPQSIIFLLG Trigger: GCCTAGAAGGAAGATAATGGATTGAGGACATTGTCATTCCCACCCTGATAGCACTTGGAAAGAGACATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CCA 72 bp | AATTCAGTCTGCTGGTTCAGTCTGGAACTAGCATCCTaGGGAATATGCTACACTTCCTGCTTCATTTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: NSVCWFSLELAS*GICYTSCFISL Trigger: TAGTGAAATGAAGCAGGAAGTGTAGCATATTCCCCAGGATGCTAGTTCCAGACTGAACCAGCAGACTGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | TACCGAGGCCACAGGAACTCTGTGTTTAAATACATATaGAAATGGAGTCACTTCCCCTTACATTCCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: YRGHRNSVFKYI*KWSHFPLHSTT Trigger: AGTGGTGGAATGTAAGGGGAAGTGACTCCATTTTCATATGTATTTAAACACAGAGTTCCTGTGGCCTCGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR GCA 72 bp | TTATGTATATTAGCGTTTTGCCTGAACACATGTATGTaGACCATTATGTGTGTCTGGTGTCTGCAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LCILAFCLNTCM*TIMCVWCLQRP Trigger: AGGCCTCTGCAGACACCAGACACACATAATGGTGCACATACATGTGTTCAGGCAAAACGCTAATATACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CCA 72 bp | AGAGCTTCTAACATGCTATTAAAGCAGAAGTCGGACTaGAAGTTTTTGATGTGGGAGGAAGTCAACCGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RASNMLLKQKSD*KFLMWEEVNRD Trigger: ATCACGGTTGACTTCCTCCCACATCAAAAACTTCCAGTCCGACTTCTGCTTTAATAGCATGTTAGAAGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR TCA 72 bp | ACATACGAGAGAAAGTCAGTTCCCTCTGTTTTCAAGTaGCAGTTATTGGGAAAATTCAGGAATGACGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: TYERKSVPSVFK*QLLGKFRNDAH Trigger: ATGTGCGTCATTCCTGAATTTTCCCAATAACTGTCACTTGAAAACAGAGGGAACTGACTTTCTCTCGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CCA 72 bp | TGTATTTTCTCTATGTGCATAGTTCCTTTCGGACTCTaGGAATATCTTCCTAGGCAGTCCAGTAGTTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: CIFSMCIVPFGL*EYLPRQSSSYL Trigger: TAAGTAACTACTGGACTGCCTAGGAAGATATTCCCAGAGTCCGAAAGGAACTATGCACATAGAGAAAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | CGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATaGCTCGCTAGCATGTTCCACCCCACTGGGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RHCPQGCTATRE*LASMFHPTGWT Trigger: CGTCCACCCAGTGGGGTGGAACATGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCACAGCTGCTCATTCTCTaGGAGGGCAGCCTTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGDTAHRAALPPENCSLAQLLIL*EGSLEP Trigger: AGGCTCAAGGCTGCCCTCTCAGAGAATGAGCAGCTG...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCAGCTCACCACAGGGGCTaGCAGCACATTCACCACATG | + |
|
Preference number: 4 (lower is better) Translates to: PGDTAHRAALPPENCSLAAHHRG*QHIHHM Trigger: CATGTGGTGAATGTGCTGCCAGCCCCTGTGGTGAGC...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCAGAACCGAGGAGCTTTTaGTGTGGAGGATCCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGDTAHRAALPPENCSLAEPRSF*CGGSWC Trigger: ACACCAGGATCCTCCACATCAAAAGCTCCTCGGTTC...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCAGAGCACCCTGGAGAATaGGGGCTTTCTGTTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDTAHRAALPPENCSLAEHPGE*GLSVGY Trigger: ATAGCCAACAGAAAGCCCGCATTCTCCAGGGTGCTC...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCACATGGGTCGTCTCTGTaGTTGTTGGAGGGGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGDTAHRAALPPENCSLAHGSSL*LLEGNQ Trigger: TTGGTTCCCCTCCAACAACCACAGAGACGACCCATG...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGCGACACTGCCCACAGGGCTGCACTGCCACCAGAGAATTGCTCGCTAGCAGGGAACCAAAGAAGGTaGTGGTTTGGTTCCGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDTAHRAALPPENCSLAGNQRR*WFGSAD Trigger: ATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCC...TGCTAGCGAGCAATTCTCTGGTGGCAGTGCAGCCCTGTGGGCAGTGTCGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | CAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTaGAGCAGTCCTCCCCAGCTCCTTGGATCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QQEQRRQASRLV*SSPPQLLGSLT Trigger: GGTCAGGGATCCAAGGAGCTGGGGAGGACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAAGAGCCTCTGGTTCTCTaGCACCACCTCGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLATLPNITVPSAQGTKEPLVL*HHLVQL Trigger: CAGCTGGACGAGGTGGTGTCAGAGAACCAGAGGCTC...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAAACCGAGGAGAGGAGATaGAGCAACTGGAGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AASLGSHACSVHCWSLRETEERR*SNWRKP Trigger: CGGCTTCCTCCAGTTGCTCCATCTCCTCTCCTCGGT...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTACTCAGGGATGGTGCTaGCCACATGGGTCGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDGQQEQRRQASRLVLSSTQGWC*PHGSSL Trigger: CAGAGACGACCCATGTGGTCAGCACCATCCCTGAGT...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTGCTTGCCTTCTTCTTGCGCGACTaGCAAGCAGACTCTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFLFPWSCVQGKSLLAFFLRD*QADSRF Trigger: GAACCGAGAGTCTGCTTGTCAGTCGCGCAAGAAGAA...GGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAAAAGAGATGCCTCCTCTaGTTGGCAGGGCTCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: AASLGSHACSVHCWSLREKRCLL*LAGLTL Trigger: TAGTGTGAGCCCTGCCAATCAGAGGAGGCATCTCTT...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTGCTTGCCTGGACAGCCATCAGCTaGGAATTAGAGCCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFLFPWSCVQGKSLLAWTAIS*ELEPCS Trigger: GGAACAGGGCTCTAATTCTCAGCTGATGGCTGTCCA...GGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAAAATCGACTGCTGCTTTaGCAGTGGCATAAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AASLGSHACSVHCWSLRENRLLL*QWHKGW Trigger: CCAGCCCTTATGCCACTGGCAAAGCAGCAGTCGATT...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTACGTATCTCCCCTCCTaGGGATGGCGTCAAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDGQQEQRRQASRLVLSSTYLPS*GWRQRS Trigger: GCTTCTTTGACGCCATCCGCAGGAGGGGAGATACGT...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAACTCCCAGTCTTCATCTaGTCCATGAGGAAGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: AASLGSHACSVHCWSLRELPVFI*SMRKNR Trigger: CCGGTTCTTCCTCATGGACCAGATGAAGACTGGGAG...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTGCTTGCCGTGTTAATCAGGGGTTaGCATGGAGGTGGAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CSLFLFPWSCVQGKSLLAVLIRG*HGGGGI Trigger: TATGCCTCCACCTCCATGTCAACCCCTGATTAACAC...GGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCATCTAAGCTACAGGAGATGGAGCAACTaGAGGAAGCCGGAGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSHGFGHSKQAVFHLSYRRWSN*RKPEKE Trigger: CTCTTTCTCCGGCTTCCTCCAGTTGCTCCATCTCCT...GTAGCTTAGATGGAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TCCCTGACCTGTGCTGTGGCCACCTTAACTTCTGTCTGCTCTTTGGCTGTGCCTTCTTCGCTTTGGACTTaGGACTTTGAGCCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTCAVATLTSVCSLAVPSSLWT*DFEPLV Trigger: AACCAGAGGCTCAAAGTCCCAAGTCCAAAGCGAAGA...AGGCACAGCCAAAGAGCAGACAGAAGTTAAGGTGGCCACAGCACAGGTCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CCACAGGGTAGCCCACCTCCCCCACAAATGGCTACTCCTAAAGGTACTCCATGTGGGTTGACATGGAGGTaGAGGCATATAAAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGSPPPPQMATPKGTPCGLTWR*RHIKQW Trigger: CCATTGCTTTATATGCCTCCACCTCCATGTCAACCC...ACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CCACAGGGTAGCCCACCTCCCCCACAAATGGCTACTCCTAAAGGTACTCCATGTCAGCCTCGAAGTTCATaGTTCAACCTGAGAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGSPPPPQMATPKGTPCQPRSS*FNLRDS Trigger: AGAGTCTCTCAGGTTGAACCATGAACTTCGAGGCTG...ACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGAACTCTTCGGGATTCTTaGTCCAGCATGCTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IWPAQGLLLANEKERQRGTLRDS*SSMLMG Trigger: GCCCATGAGCATGCTGGAGCAAGAATCCCGAAGAGT...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGACTTCTCTTCCTTCAGTaGCTCTACAGAGGAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWPAQGLLLANEKERQRGLLFLQ*LYRGGA Trigger: AGCCCCTCCTCTGTAGAGCCACTGAAGGAAGAGAAG...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTGAGGAGCTTTTGATGTaGAGGATCCTGGTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PDGQQEQRRQASRLVLSSEELLM*RILVSI Trigger: GATGGACACCAGGATCCTCCACATCAAAAGCTCCTC...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | CTAGTCTTGCTTAAGCCTAGTGACCTCCAAGTCCCTTaGCTGAGTCTGGTTTCACAGGAGTATGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLKPSDLQVP*LSLVSQEYALG Trigger: GCCCAGAGCATACTCCTGTGAAACCAGACTCAGCAAAGGGACTTGGAGGTCACTAGGCTTAAGCAAGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | CTCCTAAAGGTACTCCATGTATTTGGTATCTTCTCCTaGGCACCCATTAGAGGACCAGCCCCCGGGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLKVLHVFGIFS*APIRGPAPGTN Trigger: GTTTGTCCCGGGGGCTGGTCCTCTAATGGGTGCCAAGGAGAAGATACCAAATACATGGAGTACCTTTAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGCTCATTTAAACCTCTGGCTTCACTGCCCCTCATTACCATGATGAGAAGAAAACTCTGCCTTCATGTCTaGGCAGAAGTGGCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSFKPLASLPLITMMRRKLCLHV*AEVAAG Trigger: CCCGGCAGCCACTTCTGCTCAGACATGAAGGCAGAG...TTTTCTTCTCATCATGGTAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | CCACAGGGTAGCCCACCTCCCCCACAAATGGCTACTCCTAAAGGTACTCCATGTATAAGCCTCATGTGCTaGATCAAAGTGCACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQGSPPPPQMATPKGTPCISLMC*IKVHII Trigger: GATGATGTGCACTTTGATGCAGCACATGAGGCTTAT...ACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTATGTGGTGAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCATGGTGCTGACCACATaGGTCGTCTCTGTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCGEGSHGFGHSKQAVFMVLTT*VVSVVV Trigger: AACAACCACAGAGACGACCCATGTGGTCAGCACCAT...GAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTCACCACATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTCTTCCTCTTCCCCTGGAGTTGCGTACAAGGCAAGTCTCTGCTTGCCCATCATCAGTGTCTGTaGAATAGCCAAGTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLFLFPWSCVQGKSLLAHHQCL*NSQVQQ Trigger: TTGCTGAACTTGGCTATTTCACAGACACTGATGATG...GGCAAGCAGAGACTTGCCTTGTACGCAACTCCAGGGGAAGAGGAAGAGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGCCATGGCTTCGGGCACTCTAAGCAAGCAGTCTTCCATCTAAGCTACAATGATGATGGCTTTTaGTGGGACACTGGCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSHGFGHSKQAVFHLSYNDDGF*WDTGIG Trigger: ACCAATGCCAGTGTCCCAGCAAAAGCCATCATCATT...GTAGCTTAGATGGAAGACTGCTTGCTTAGAGTGCCCGAAGCCATGGCTTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | TGTGCACTGTTGGTCCTTAAGGGAAACTCTCTAGTCTaGCTTAAGCCTAGTGACCTCCAAGTCCCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CALLVLKGNSLV*LKPSDLQVPLL Trigger: CAGCAAAGGGACTTGGAGGTCACTAGGCTTAAGCAAGACTAGAGAGTTTCCCTTAAGGACCAACAGTGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | AGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTaGGTCCTTAAGGGAAACTCTCTAGTCTTGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSGKPCLLCAL*VLKGNSLVLLK Trigger: CTTAAGCAAGACTAGAGAGTTTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | ATTGAGAAAAGCACTAAAGATGACACAGCAGAACCAACACCAGGCGACACTGCCAGGGCTGGTAGTGTCTaGATGATGATGGCTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IEKSTKDDTAEPTPGDTARAGSV*MMMAFA Trigger: AGCAAAAGCCATCATCATTCAGACACTACCAGCCCT...GGCAGTGTCGCCTGGTGTTGGTTCTGCTGTGTCATCTTTAGTGCTTTTCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | CCACAGGGTAGCCCACCTCCCCCACAAATGGCTACTCCTAAAGGTACTCCATGTCATAGTCCTGCCCATTaGTCACATTATCATTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: PQGSPPPPQMATPKGTPCHSPAH*SHYHLC Trigger: ACATAAATGATAATGTGATCAATGGGCAGGACTATG...ACATGGAGTACCTTTAGGAGTAGCCATTTGTGGGGGAGGTGGGCTACCCTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGTATGTACCTGCTGAAGGATGAGGTCAATGCTCCCAGGCTGAGGTGGAAAGAAAATAAAGGCTTGGGCTaGACTGAAGGTTTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: CMYLLKDEVNAPRLRWKENKGLG*TEGFEL Trigger: GAGTTCAAAACCTTCAGTTCAGCCCAAGCCTTTATT...TTCTTTCCACCTCAGCCTGGGAGCATTGACCTCATCCTTCAGCAGGTACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | GAGTCACTGCAGATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTTGTGCTGCATCAAAGTaGACATCATCAGTGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLQILFVSQQISIRNACCAASK*TSSVSV Trigger: CACAGACACTGATGATGTGCACTTTGATGCAGCACA...ACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATCTGCAGTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TGCTCATTTAAACCTCTGGCTTCACTGCCCCTCATTACCATGATGAGAAGAAAATTGGACTTGGGACTTTaGGCCTCTGGTTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CSFKPLASLPLITMMRRKLDLGL*ASGSLT Trigger: TGTCAGAGAACCAGAGGCTCAAAGTCCCAAGTCCAA...TTTTCTTCTCATCATGGTAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR GCA 90 bp | TGCTCATTTAAACCTCTGGCTTCACTGCCCCTCATTACCATGATGAGAAGAAAATTCTCCTTCTTCAGCTaGTCATTCTCTGAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFKPLASLPLITMMRRKFSFFS*SFSERA Trigger: TGCCCTCTCAGAGAATGAGCAGCTGAAGAAGGAGAA...TTTTCTTCTCATCATGGTAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TTACCAACTGGAGATAATCCCTTTACCCAAACTCTAAACTGTTTTGACTCTTTGCTGGGACACTGGCATTaGTTTGAGTCTTGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTGDNPFTQTLNCFDSLLGHWH*FESWAL Trigger: CAGCGCCCAAGACTCAAACCAATGCCAGTGTCCCAG...CAAAGAGTCAAAACAGTTTAGAGTTTGGGTAAAGGGATTATCTCCAGTTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TGCTCATTTAAACCTCTGGCTTCACTGCCCCTCATTACCATGATGAGAAGAAAAGATGATGGCTTTTGCTaGGACACTGGCATTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSFKPLASLPLITMMRRKDDGFC*DTGIGL Trigger: CAAACCAATGCCAGTGTCCCAGCAAAAGCCATCATC...TTTTCTTCTCATCATGGTAATGAGGGGCAGTGAAGCCAGAGGTTTAAATGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TATATTAGCGTTTTGCCTGAACACATGTATGTGCACCATTATGTGTGTCTGGTGGCTCCAGCATGCTCATaGGCCCATAGTTCAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: YISVLPEHMYVHHYVCLVAPACS*AHSSAL Trigger: TAATGCTGAACTATGGGCCCATGAGCATGCTGGAGC...CACCAGACACACATAATGGTGCACATACATGTGTTCAGGCAAAACGCTAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | GAGTCACTGCAGATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTATGCGGGCTTTCTGTTaGCTATTTGTCATTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ESLQILFVSQQISIRNACMRAFC*LFVILL Trigger: TAGAAGAATGACAAATAGCCAACAGAAAGCCCGCAT...ACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATCTGCAGTGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | GATTCTTATGACAGAGCTACAGGTCACATGTGGAAGTaGAGGTGTATGTACCTGCTGAAGGATGAGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DSYDRATGHMWK*RCMYLLKDEVN Trigger: ATTGACCTCATCCTTCAGCAGGTACATACACCTCAACTTCCACATGTGACCTGTAGCTCTGTCATAAGAATC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | CTACACTTCCTGCTTCATTTCACTATAGTCACCAGCTaGACGGAGGACAAAAAGCCCACCAGTGTGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LHFLLHFTIVTS*TEDKKPTSVLF Trigger: AAATAACACACTGGTGGGCTTTTTGTCCTCCGTCAAGCTGGTGACTATAGTGAAATGAAGCAGGAAGTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGTGTTTCCAGGACCAGTaGCAGGCTTCTCTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPNLKVGFHSILRKLFYECFQDQ*QASLPS Trigger: TGAAGGAAGAGAAGCCTGTCACTGGTCCTGGAAACA...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CATCCGTTCTCATCACCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGCATTGGTTTGAGTCTTaGGCGCTGCTGGAAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: HPFSSPPNLKVGFHSILRHWFES*ALLEVI Trigger: TATTACTTCCAGCAGCGCCCAAGACTCAAACCAATG...CCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGGTGATGAGAACGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TATATTAGCGTTTTGCCTGAACACATGTATGTGCACCATTATGTGTGTCTGGTGCTTGTGGTCTTGTTGTaGGTGGTAGCTGGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: YISVLPEHMYVHHYVCLVLVVLL*VVAGNS Trigger: GCTATTACCAGCTACCACCCACAACAAGACCACAAG...CACCAGACACACATAATGGTGCACATACATGTGTTCAGGCAAAACGCTAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTGGGTTCTTTATATAGCTTTAGCTGTCCTGTCCTGGAATTTGAAATGCGTCTCTGTGGTTGTTaGAGGGGAACCAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FEVGSLYSFSCPVLEFEMRLCGC*RGTKEG Trigger: ACCTTCTTTGGTTCCCCTCCAACAACCACAGAGACG...CATTTCAAATTCCAGGACAGGACAGCTAAAGCTATATAAAGAACCCACCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| 3UTR CAA 72 bp | TCATCTCTCAAGCATCCGTTCTCATCACCTCCTAACTaGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLKHPFSSPPN*KVGFHSILRKL Trigger: CAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGGTGATGAGAACGGATGCTTGAGAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TTACCAACTGGAGATAATCCCTTTACCCAAACTCTAAACTGTTTTGACTCTTTGAGGAACGTGCTGAGTTaGAGAACACGAGTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPTGDNPFTQTLNCFDSLRNVLS*RTRVCG Trigger: TCCACAGACTCGTGTTCTTCAACTCAGCACGTTCCT...CAAAGAGTCAAAACAGTTTAGAGTTTGGGTAAAGGGATTATCTCCAGTTGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAGGTGGGTTCTTTATATAGCTTTAGCTGTCCTGTCCTGGAATTTGAAATGTCCACTTCATGTCTATaGACCCAGCCTCGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FEVGSLYSFSCPVLEFEMSTSCL*TQPRSS Trigger: TGAACTTCGAGGCTGGGTTCATAGACATGAAGTGGA...CATTTCAAATTCCAGGACAGGACAGCTAAAGCTATATAAAGAACCCACCTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGAATCAGGGGTTGACATaGAGGTGGAGGCATATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPNLKVGFHSILRKLFYENQGLT*RWRHIK Trigger: CTTTATATGCCTCCACCTCCATGTCAACCCCTGATT...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CCA 90 bp | TTACCAACTGGAGATAATCCCTTTACCCAAACTCTAAACTGTTTTGACTCTTTGAACCAAAGAAGGTGCTaGTTTGGTTCCGCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPTGDNPFTQTLNCFDSLNQRRC*FGSADD Trigger: ATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTT...CAAAGAGTCAAAACAGTTTAGAGTTTGGGTAAAGGGATTATCTCCAGTTGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 90 bp | GCCGGAGAAAGAGGCTGGGGCTCTGCCTTCATGTCTGAGCAGAAGTaGCTGCCGGGGCTCCATAGGTCTGACTCCCAAGGCATCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: AGERGWGSAFMSEQK*LPGLHRSDSQGIKS Trigger: GGATTTGATGCCTTGGGAGTCAGACCTATGGAGCCCCGGCAGCCACTTCTGCTCAGACATGAAGGCAGAGCCCCAGCCTCTTTCTCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 90 bp | CGTGCTGAGTTGAAGAACACGAGTCTGTGGACCGAGGAGAGGAGATaGAGCAACTGGAGGAAGCCGGAGAAAGAGGCTGGGGCTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAELKNTSLWTEERR*SNWRKPEKEAGALP Trigger: AGGCAGAGCCCCAGCCTCTTTCTCCGGCTTCCTCCAGTTGCTCCATCTCCTCTCCTCGGTCCACAGACTCGTGTTCTTCAACTCAGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS GCA 90 bp | CCACATGGGTCGTCTCTGTGGTTGTTGGAGGGGAACCAAAGAAGGTaGTGGTTTGGTTCCGCTGATGATCCCGGAGATAAGGGGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: PHGSSLWLLEGNQRR*WFGSADDPGDKGEP Trigger: CGGTTCCCCCTTATCTCCGGGATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACAGAGACGACCCATGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 90 bp | CATGGGTCGTCTCTGTGGTTGTTGGAGGGGAACCAAAGAAGGTGCTaGTTTGGTTCCGCTGATGATCCCGGAGATAAGGGGGAACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGSSLWLLEGNQRRC*FGSADDPGDKGEPR Trigger: CCTCGGTTCCCCCTTATCTCCGGGATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACAGAGACGACCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS TCA 90 bp | GACAGCTCTTCGCTTTGGACTTGGGACTTTGAGCCTCTGGTTCTCTaGCACCACCTCGTCCAGCTGTCGCTTCAGGGAGCCATTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSSLWTWDFEPLVL*HHLVQLSLQGAILL Trigger: AAGGAGAATGGCTCCCTGAAGCGACAGCTGGACGAGGTGGTGTCAGAGAACCAGAGGCTCAAAGTCCCAAGTCCAAAGCGAAGAGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS GCA 90 bp | GAGAAAGAGGCTGGGGCTCTGCCTTCATGTCTGAGCAGAAGTGGCTaGCGGGGCTCCATAGGTCTGACTCCCAAGGCATCAAATCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EKEAGALPSCLSRSG*RGSIGLTPKASNPN Trigger: ATTTGGATTTGATGCCTTGGGAGTCAGACCTATGGAGCCCCGGCAGCCACTTCTGCTCAGACATGAAGGCAGAGCCCCAGCCTCTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 90 bp | ATCACACAGACAGCTCTTCGCTTTGGACTTGGGACTTTGAGCCTCTaGTTCTCTGACACCACCTCGTCCAGCTGTCGCTTCAGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ITQTALRFGLGTLSL*FSDTTSSSCRFREP Trigger: TGGCTCCCTGAAGCGACAGCTGGACGAGGTGGTGTCAGAGAACCAGAGGCTCAAAGTCCCAAGTCCAAAGCGAAGAGCTGTCTGTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 90 bp | CGACTCAGGGATGGTGCTGACCACATGGGTCGTCTCTGTGGTTGTTaGAGGGGAACCAAAGAAGGTGCTGGTTTGGTTCCGCTGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RLRDGADHMGRLCGC*RGTKEGAGLVPLMI Trigger: GATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACAGAGACGACCCATGTGGTCAGCACCATCCCTGAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS TCA 90 bp | TTCCTACTGATGCTAGTGGTTTCTGTGTACTGGACAGCCATCAGCTaGGAATTAGAGCCCTGTTCCAGAGCACCCTGGAGAATGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLMLVVSVYWTAIS*ELEPCSRAPWRMRA Trigger: AGCCCGCATTCTCCAGGGTGCTCTGGAACAGGGCTCTAATTCTCAGCTGATGGCTGTCCAGTACACAGAAACCACTAGCATCAGTAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | CCTGATGGTCAGCAGGAGCAGAGAAGGCAAGCTTCCAGACTAGTTTTGAGCAGTTCGTCTCTGTGGTTGTaGGAGGGGAACCAAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDGQQEQRRQASRLVLSSSSLWL*EGNQRR Trigger: CCTTCTTTGGTTCCCCTCCAACAACCACAGAGACGA...ACTGCTCAAAACTAGTCTGGAAGCTTGCCTTCTCTGCTCCTGCTGACCATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS TCA 90 bp | ATACTATCATCACACAGACAGCTCTTCGCTTTGGACTTGGGACTTTaGGCCTCTGGTTCTCTGACACCACCTCGTCCAGCTGTCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILSSHRQLFALDLGL*ASGSLTPPRPAVAS Trigger: TGAAGCGACAGCTGGACGAGGTGGTGTCAGAGAACCAGAGGCTCAAAGTCCCAAGTCCAAAGCGAAGAGCTGTCTGTGTGATGATAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTGACCTGTGCTGTGGCCACCTTAACTTCTGTCTGCTCTTTGGCTGTGCCTAGTCCATGTTCTGTTTaGTTTCCAGGACCAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLTCAVATLTSVCSLAVPSPCSV*FPGPVT Trigger: TGTCACTGGTCCTGGAAACAAAACAGAACATGGACT...AGGCACAGCCAAAGAGCAGACAGAAGTTAAGGTGGCCACAGCACAGGTCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAAAAGCACTAAAGATGACACAGCAGAACCAACACCAGGCGACACTGCCGGAACCGAGGAGCTTTaGATGTGGAGGATCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IEKSTKDDTAEPTPGDTAGTEEL*MWRILV Trigger: CACCAGGATCCTCCACATCAAAAGCTCCTCGGTTCC...GGCAGTGTCGCCTGGTGTTGGTTCTGCTGTGTCATCTTTAGTGCTTTTCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | ATCTGGCCAGCCCAGGGTCTACTTCTTGCTAATGAGAAAGAAAGGCAAAGGGGATGTGTTAATCAGGGGTaGACATGGAGGTGGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IWPAQGLLLANEKERQRGCVNQG*TWRWRH Trigger: ATGCCTCCACCTCCATGTCAACCCCTGATTAACACA...TCCCCTTTGCCTTTCTTTCTCATTAGCAAGAAGTAGACCCTGGGCTGGCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | GAGTCACTGCAGATTCTATTCGTGTCTCAGCAGATCAGCATCAGGAATGCGTGTGGTCTTGTGGTCTTGTaGTGGGTGGTAGCTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ESLQILFVSQQISIRNACGLVVL*WVVAGN Trigger: ATTACCAGCTACCACCCACAACAAGACCACAAGACC...ACACGCATTCCTGATGCTGATCTGCTGAGACACGAATAGAATCTGCAGTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAAAATGCGGGCTTTCTGTaGGCTATTTGTCATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPLATLPNITVPSAQGTKNAGFL*AICHSS Trigger: AGAAGAATGACAAATAGCCAACAGAAAGCCCGCATT...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCTAGCAACACTTCCCAACATCACAGTACCATCAGCCCAGGGCACAAAAGTCATTCTTCTAGATTaGGTCCTTTCCACTTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: QPLATLPNITVPSAQGTKVILLD*VLSTSC Trigger: ACATGAAGTGGAAAGGACCAAATCTAGAAGAATGAC...TTTTGTGCCCTGGGCTGATGGTACTGTGATGTTGGGAAGTGTTGCTAGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCTCTGGGAAGCCATGCTTGCTCTGTGCACTGTTGGTCCTTAAGGGAATTGCTGGTAATACAATaGACATTTTTGGTCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AASLGSHACSVHCWSLRELLVIQ*TFLVLW Trigger: CCACAAGACCAAAAATGTCAATTGTATTACCAGCAA...TTCCCTTAAGGACCAACAGTGCACAGAGCAAGCATGGCTTCCCAGAGAAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS TCA 90 bp | CATAAGCCTCATGTGCTGCATCAAAGTGCACATCATCAGTGTCTGTaGAATAGCCAAGTTCAGCAAACAACGTCGACTCCCAGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HKPHVLHQSAHHQCL*NSQVQQTTSTPSLH Trigger: ATGAAGACTGGGAGTCGACGTTGTTTGCTGAACTTGGCTATTTCACAGACACTGATGATGTGCACTTTGATGCAGCACATGAGGCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | CATCCGTTCTCATCACCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGGGAGGCGTAATACACTaGCAGCTCACTCCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: HPFSSPPNLKVGFHSILRGGVIH*QLTPRI Trigger: AATTCTGGGAGTGAGCTGCAAGTGTATTACGCCTCC...CCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGGTGATGAGAACGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS-3UTR CAA 90 bp | CCTCCTAACTTGAAAGTGGGTTTCCATTCTATTCTAAGGAAGCTGTTTTATGAGTTTGGTCTTGTGGTCTaGTTGTGGGTGGTAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPNLKVGFHSILRKLFYEFGLVV*LWVVAG Trigger: ACCAGCTACCACCCACAACAAGACCACAAGACCAAA...CTCATAAAACAGCTTCCTTAGAATAGAATGGAAACCCACTTTCAAGTTAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS TCA 90 bp | CTATTTGTCATTCTTCTAGATTTGGTCCTTTCCACTTCATGTCTATaGACCCAGCCTCGAAGTTCATGGTTCAACCTGAGAGACTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFVILLDLVLSTSCL*TQPRSSWFNLRDSV Trigger: AACAGAGTCTCTCAGGTTGAACCATGAACTTCGAGGCTGGGTTCATAGACATGAAGTGGAAAGGACCAAATCTAGAAGAATGACAAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 72 bp | AGAGGCTGGGGCTCTGCCTTCATGTCTGAGCAGAAGTaGCTGCCGGGGCTCCATAGGTCTGACTCCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGWGSAFMSEQK*LPGLHRSDSQG Trigger: GCCTTGGGAGTCAGACCTATGGAGCCCCGGCAGCCACTTCTGCTCAGACATGAAGGCAGAGCCCCAGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS GCA 72 bp | GCTGGGGCTCTGCCTTCATGTCTGAGCAGAAGTGGCTaGCGGGGCTCCATAGGTCTGACTCCCAAGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: AGALPSCLSRSG*RGSIGLTPKAS Trigger: TGATGCCTTGGGAGTCAGACCTATGGAGCCCCGGCAGCCACTTCTGCTCAGACATGAAGGCAGAGCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS TCA 72 bp | TCGCTTTGGACTTGGGACTTTGAGCCTCTGGTTCTCTaGCACCACCTCGTCCAGCTGTCGCTTCAGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLWTWDFEPLVL*HHLVQLSLQGA Trigger: GGCTCCCTGAAGCGACAGCTGGACGAGGTGGTGTCAGAGAACCAGAGGCTCAAAGTCCCAAGTCCAAAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS GCA 72 bp | AGCTGTCGCTTCAGGGAGCCATTCTCCTTCTTCAGCTaGTCATTCTCTGAGAGGGCAGCCTTGAGCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCRFREPFSFFS*SFSERAALSLA Trigger: GGCCAGGCTCAAGGCTGCCCTCTCAGAGAATGAGCAGCTGAAGAAGGAGAATGGCTCCCTGAAGCGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CCA 72 bp | GAGATGGAGCAACTGGAGGAAGCCGGAGAAAGAGGCTaGGGCTCTGCCTTCATGTCTGAGCAGAAGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EMEQLEEAGERG*GSAFMSEQKWL Trigger: CAGCCACTTCTGCTCAGACATGAAGGCAGAGCCCCAGCCTCTTTCTCCGGCTTCCTCCAGTTGCTCCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
||
| CDS CAA 90 bp | GGTCGTCTCTGTGGTTGTTGGAGGGGAACCAAAGAAGGTGCTGGTTaGGTTCCGCTGATGATCCCGGAGATAAGGGGGAACCGAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GRLCGCWRGTKEGAG*VPLMIPEIRGNRGA Trigger: AGCTCCTCGGTTCCCCCTTATCTCCGGGATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACAGAGACGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 72 bp | CGGCTGAGCAGACGACAGAACCGCAGGGCTCTGAAGTaGAACCACAGTCGGCTGAGAGAGCAAAACAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RLSRRQNRRALK*NHSRLREQNSL Trigger: CAGACTGTTTTGCTCTCTCAGCCGACTGTGGTTCAACTTCAGAGCCCTGCGGTTCTGTCGTCTGCTCAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 90 bp | TGCAAGAACCGGCTGAGCAGACGACAGAACCGCAGGGCTCTGAAGTaGAACCACAGTCGGCTGAGAGAGCAAAACAGTCTGGCCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: CKNRLSRRQNRRALK*NHSRLREQNSLAFG Trigger: ACCAAAGGCCAGACTGTTTTGCTCTCTCAGCCGACTGTGGTTCAACTTCAGAGCCCTGCGGTTCTGTCGTCTGCTCAGCCGGTTCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CCA 72 bp | ACAGCTCTTCGCTTTGGACTTGGGACTTTGAGCCTCTaGTTCTCTGACACCACCTCGTCCAGCTGTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TALRFGLGTLSL*FSDTTSSSCRF Trigger: GAAGCGACAGCTGGACGAGGTGGTGTCAGAGAACCAGAGGCTCAAAGTCCCAAGTCCAAAGCGAAGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 72 bp | CGTATCTCCCCTCCTGCGGATGGCGTCAAAGAAGCCTaGGTAACTTCCAGGGGAGGCGTAATACACTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RISPPADGVKEA*VTSRGGVIHLQ Trigger: CTGCAAGTGTATTACGCCTCCCCTGGAAGTTACCAAGGCTTCTTTGACGCCATCCGCAGGAGGGGAGATACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CCA 72 bp | TCTCTGTGGTTGTTGGAGGGGAACCAAAGAAGGTGCTaGTTTGGTTCCGCTGATGATCCCGGAGATAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SLWLLEGNQRRC*FGSADDPGDKG Trigger: CCCCTTATCTCCGGGATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 72 bp | TGTGGTTGTTGGAGGGGAACCAAAGAAGGTGCTGGTTaGGTTCCGCTGATGATCCCGGAGATAAGGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CGCWRGTKEGAG*VPLMIPEIRGN Trigger: GTTCCCCCTTATCTCCGGGATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS GCA 72 bp | TCGTCTCTGTGGTTGTTGGAGGGGAACCAAAGAAGGTaGTGGTTTGGTTCCGCTGATGATCCCGGAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: SSLWLLEGNQRR*WFGSADDPGDK Trigger: CTTATCTCCGGGATCATCAGCGGAACCAAACCAGCACCTTCTTTGGTTCCCCTCCAACAACCACAGAGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS TCA 72 bp | ATGCTAGTGGTTTCTGTGTACTGGACAGCCATCAGCTaGGAATTAGAGCCCTGTTCCAGAGCACCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: MLVVSVYWTAIS*ELEPCSRAPWR Trigger: TCTCCAGGGTGCTCTGGAACAGGGCTCTAATTCTCAGCTGATGGCTGTCCAGTACACAGAAACCACTAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 90 bp | GGCGTCAAAGAAGCCTTGGTAACTTCCAGGGGAGGCGTAATACACTaGCAGCTCACTCCCAGAATTCCTACTGATGCTAGTGGTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GVKEALVTSRGGVIH*QLTPRIPTDASGFC Trigger: ACAGAAACCACTAGCATCAGTAGGAATTCTGGGAGTGAGCTGCAAGTGTATTACGCCTCCCCTGGAAGTTACCAAGGCTTCTTTGACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CCA 72 bp | AAGTTCAGCAAACAACGTCGACTCCCAGTCTTCATCTaGTCCATGAGGAAGAACCGGACTAAAAGGCGACTC | + |
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Preference number: 6 (lower is better) Translates to: KFSKQRRLPVFI*SMRKNRTKRRL Trigger: GAGTCGCCTTTTAGTCCGGTTCTTCCTCATGGACCAGATGAAGACTGGGAGTCGACGTTGTTTGCTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 72 bp | GAAGCCTTGGTAACTTCCAGGGGAGGCGTAATACACTaGCAGCTCACTCCCAGAATTCCTACTGATGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: EALVTSRGGVIH*QLTPRIPTDAS Trigger: ACTAGCATCAGTAGGAATTCTGGGAGTGAGCTGCAAGTGTATTACGCCTCCCCTGGAAGTTACCAAGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS TCA 72 bp | ATGATGATGGCTTTTGCTGGGACACTGGCATTGGTTTaGGTCTTGGGCGCTGCTGGAAGTAATAAAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: MMMAFAGTLALV*VLGAAGSNKGL Trigger: CAAGCCTTTATTACTTCCAGCAGCGCCCAAGACTCAAACCAATGCCAGTGTCCCAGCAAAAGCCATCATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS TCA 72 bp | CATGTGCTGCATCAAAGTGCACATCATCAGTGTCTGTaGAATAGCCAAGTTCAGCAAACAACGTCGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: HVLHQSAHHQCL*NSQVQQTTSTP Trigger: GGGAGTCGACGTTGTTTGCTGAACTTGGCTATTTCACAGACACTGATGATGTGCACTTTGATGCAGCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CCA 72 bp | CCTGAGAGACTCTGTTGTGTTAATCAGGGGTTGACATaGAGGTGGAGGCATATAAAGCAATGGCTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: PERLCCVNQGLT*RWRHIKQWLFT Trigger: AGTGAAGAGCCATTGCTTTATATGCCTCCACCTCCATGTCAACCCCTGATTAACACAACAGAGTCTCTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CCA 72 bp | TGTTCCAGAGCACCCTGGAGAATGCGGGCTTTCTGTTaGCTATTTGTCATTCTTCTAGATTTGGTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: CSRAPWRMRAFC*LFVILLDLVLS Trigger: GGAAAGGACCAAATCTAGAAGAATGACAAATAGCCAACAGAAAGCCCGCATTCTCCAGGGTGCTCTGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS CAA 72 bp | GTTCAACCTGAGAGACTCTGTTGTGTTAATCAGGGGTaGACATGGAGGTGGAGGCATATAAAGCAATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VQPERLCCVNQG*TWRWRHIKQWL Trigger: GAGCCATTGCTTTATATGCCTCCACCTCCATGTCAACCCCTGATTAACACAACAGAGTCTCTCAGGTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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| CDS TCA 72 bp | ATTCTTCTAGATTTGGTCCTTTCCACTTCATGTCTATaGACCCAGCCTCGAAGTTCATGGTTCAACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ILLDLVLSTSCL*TQPRSSWFNLR Trigger: TCTCAGGTTGAACCATGAACTTCGAGGCTGGGTTCATAGACATGAAGTGGAAAGGACCAAATCTAGAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027974.7 |
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