Pregenerated sensors for ATF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026628Ensembl transcript IDs: ENSMUST00000027941.14, ENSMUST00000195117.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTCCTGCCTGCTCCACGGTTCACTCGGGGGCAGAGTGGGTCAATaGAGTAGGTCACCACAGGCCCTCCTGCCCCAACGGCTCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: CSCLLHGSLGGRVGQ*SRSPQALLPQRLLA Trigger: AGCCAAGAGCCGTTGGGGCAGGAGGGCCTGTGGTGACCTACTGCATTGACCCACTCTGCCCCCGAGTGAACCGTGGAGCAGGCAGGAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | ACAAAGGATGCTCCTGCCTGCTCCACGGTTCACTCGGGGGCAGAGTaGGTCAATGCAGTAGGTCACCACAGGCCCTCCTGCCCCAACGGC | + |
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Preference number: 1 (lower is better) Translates to: TKDAPACSTVHSGAE*VNAVGHHRPSCPNG Trigger: GCCGTTGGGGCAGGAGGGCCTGTGGTGACCTACTGCATTGACCCACTCTGCCCCCGAGTGAACCGTGGAGCAGGCAGGAGCATCCTTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | CATCCCACAATGCAGATGCCTGGCCCTGCACCTGGCTTCCAACCCTaGTCTCCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: HPTMQMPGPAPGFQP*SPQAVAVVIFGSSC Trigger: GCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGGAGACCAGGGTTGGAAGCCAGGTGCAGGGCCAGGCATCTGCATTGTGGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | AGTGGGTACAGGGAAAGGTGTCGTCCATCCTCTGTTGGCACAAAGTaGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SGYRERCRPSSVGTK*LSWSSASFTPLVPA Trigger: GGCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAACAGAGGATGGACGACACCTTTCCCTGTACCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR TCA 90 bp | CATCTGAGACTGGCCGGGATGATAAGGCCTAAATCCTGGAATTGGTaGGACAAAGGATGCTCCTGCCTGCTCCACGGTTCACTCGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: HLRLAGMIRPKSWNW*DKGCSCLLHGSLGG Trigger: GCCCCCGAGTGAACCGTGGAGCAGGCAGGAGCATCCTTTGTCTCACCAATTCCAGGATTTAGGCCTTATCATCCCGGCCAGTCTCAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | AGGGAAAGGTGTCGTCCATCCTCTGTTGGCACAAAGTGGCTCAGCTaGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCCAGTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: RERCRPSSVGTKWLS*SSASFTPLVPASSC Trigger: ACATGAACTGGCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAACAGAGGATGGACGACACCTTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | TTCCATATTCCCTTGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTaGTCCCACCCCACCTATCAAGGTAGACACTTCTGCCTGAATCCC | + |
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Preference number: 1 (lower is better) Translates to: FHIPLEGRCQPQWRM*SHPTYQGRHFCLNP Trigger: GGGATTCAGGCAGAAGTGTCTACCTTGATAGGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAATATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | AAAGTGCCATTAACATCCCACAATGCAGATGCCTGGCCCTGCACCTaGCTTCCAACCCTGGTCTCCACAGGCTGTGGCTGTGGTTATCTT | + |
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Preference number: 1 (lower is better) Translates to: KVPLTSHNADAWPCT*LPTLVSTGCGCGYL Trigger: AAGATAACCACAGCCACAGCCTGTGGAGACCAGGGTTGGAAGCCAGGTGCAGGGCCAGGCATCTGCATTGTGGGATGTTAATGGCACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR TCA 90 bp | ACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTaGGTATGGAGTCCTACACCCTTTGAAAGTTGGACTTTGTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: TGCGCGYLWLFLPCH*VWSPTPFESWTLCL Trigger: AAGGCACAAAGTCCAACTTTCAAAGGGTGTAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR GCA 90 bp | AGTAGCCAGAGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATaGTCTGGACCACATCTCAAAATAGCTACAAGACAAAAGTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: SSQSPGGQREISQLK*SGPHLKIATRQKCH Trigger: ATGGCACTTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACTCTGGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | CCAGAGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATGCTCTaGACCACATCTCAAAATAGCTACAAGACAAAAGTGCCATTAACA | + |
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Preference number: 1 (lower is better) Translates to: PESWWPEGDLPAEML*TTSQNSYKTKVPLT Trigger: TGTTAATGGCACTTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | GCACAACACCAGGCTCTGAAACGGATACCCTATGCACAGTCATTCTaGGACAGAACAGCATATTTTCTAGAAAGCATACCCTGGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: AQHQALKRIPYAQSF*DRTAYFLESIPWPL Trigger: CAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAATGACTGTGCATAGGGTATCCGTTTCAGAGCCTGGTGTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR TCA 90 bp | TTGGCTCTTCCTGCCCTGTCACTGAGTATGGAGTCCTACACCCTTTaGAAGTTGGACTTTGTGCCTTCATTGTGTGACGTTGTAACAGTT | + |
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Preference number: 1 (lower is better) Translates to: LALPALSLSMESYTL*KLDFVPSLCDVVTV Trigger: AACTGTTACAACGTCACACAATGAAGGCACAAAGTCCAACTTTCAAAGGGTGTAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR GCA 90 bp | AAACATCTAAATAGCACAACACCAGGCTCTGAAACGGATACCCTATaGACAGTCATTCTGGGACAGAACAGCATATTTTCTAGAAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: KHLNSTTPGSETDTL*TVILGQNSIFSRKH Trigger: ATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAATGACTGTGCATAGGGTATCCGTTTCAGAGCCTGGTGTTGTGCTATTTAGATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 90 bp | CAGTCATTCTGGGACAGAACAGCATATTTTCTAGAAAGCATACCCTaGCCATTGGACAACCTCAATAATGAATGTTCTCATTCCATATTC | + |
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Preference number: 1 (lower is better) Translates to: QSFWDRTAYFLESIP*PLDNLNNECSHSIF Trigger: GAATATGGAATGAGAACATTCATTATTGAGGTTGTCCAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAATGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR TCA 90 bp | CTCTTACAGAAAACTGTAATGATACTATTGAGTGGGATTAAACACTaGGGATTCCACAGAAACATCAGGATTTTAACAGTAGCCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LLQKTVMILLSGIKH*GFHRNIRILTVARV Trigger: GACTCTGGCTACTGTTAAAATCCTGATGTTTCTGTGGAATCCTCAGTGTTTAATCCCACTCAATAGTATCATTACAGTTTTCTGTAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCTTGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCCCACCGGCAGAGTGGGTCAATaGAGTAGGTCACCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: IPLEGRCQPQWRMWSHPTGRVGQ*SRSPQA Trigger: GGCCTGTGGTGACCTACTGCATTGACCCACTCTGCC...GGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGGCAGAGTGGGTCAATGCAGTAGGTCACCACAGGCCCTCCTGCCCCAACAAGCCAGTTTTCCAATaGCTTCAGGGTGTGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SGAEWVNAVGHHRPSCPNKPVFQ*LQGVGW Trigger: CCACCCCACACCCTGAAGCCATTGGAAAACTGGCTT...GTTGGGGCAGGAGGGCCTGTGGTGACCTACTGCATTGACCCACTCTGCCCCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCACAAAGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCGTTGTCAGCCACAGTaGAGGATGTGGTCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LAQSGSAGHQPVSLPWCQRCQPQ*RMWSHP Trigger: GGGGTGGGACCACATCCTCCACTGTGGCTGACAACG...CTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCTTGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCCCACCAAGCCAGTTTTCCAATaGCTTCAGGGTGTGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: IPLEGRCQPQWRMWSHPTKPVFQ*LQGVGW Trigger: CCACCCCACACCCTGAAGCCATTGGAAAACTGGCTT...GGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATGCTCTGGACCACATCTCCCAGGGTTCTTCCTCTaGAGTGGGTACAGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SPGGQREISQLKCSGPHLPGFFL*SGYRER Trigger: CCTTTCCCTGTACCCACTGCAGAGGAAGAACCCTGG...GAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CAA 90 bp | CTGGCTTCCAACCCTGGTCTCCACAGGCTGTGGCTGTGGTTATCTTaGGCTCTTCCTGCCCTGTCACTGAGTATGGAGTCCTACACCCTT | + |
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Preference number: 2 (lower is better) Translates to: LASNPGLHRLWLWLS*ALPALSLSMESYTL Trigger: AAGGGTGTAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGGAGACCAGGGTTGGAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATGTTTCACTCCCCTGGTaGCAGCCAGTTCATGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PQAVAVVIFGSSCPVTEYVSLPW*QPVHVA Trigger: GGCCACATGAACTGGCTGGCACCAGGGGAGTGAAAC...ATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGCACTTTCCACCATGGCAGATCCCCAGACTCTCAGAAATCAGATCTGATCGTTGTCAGCCACAGTaGAGGATGTGGTCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: EGHFPPWQIPRLSEIRSDRCQPQ*RMWSHP Trigger: GGGGTGGGACCACATCCTCCACTGTGGCTGACAACG...ATCAGATCTGATTTCTGAGAGTCTGGGGATCTGCCATGGTGGAAAGTGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATGCTCTGGACCACATCTCGTAGACACTTCTGCCTaGATCCCATTAGTGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: SPGGQREISQLKCSGPHLVDTSA*IPLVGS Trigger: GGATCCCACTAATGGGATTCAGGCAGAAGTGTCTAC...GAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCACAAAGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGGTAGACACTTCTGCCTaGATCCCATTAGTGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: LAQSGSAGHQPVSLPWCQVDTSA*IPLVGS Trigger: GGATCCCACTAATGGGATTCAGGCAGAAGTGTCTAC...CTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATGCTCTGGACCACATCTCCATTCCATATTCCCTTaGAAGGGCGTTGTCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SPGGQREISQLKCSGPHLHSIFP*KGVVSH Trigger: GTGGCTGACAACGCCCTTCCAAGGGAATATGGAATG...GAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATTCTGTTGGCACAAAGTaGCTCAGCTGGTCATCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PQAVAVVIFGSSCPVTEYSVGTK*LSWSSA Trigger: GGCTGATGACCAGCTGAGCCACTTTGTGCCAACAGA...ATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATGGAGTCCTAACGGCTCTTGGCTGCTaGGATTCTAGAAGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: VAVVIFGSSCPVTEYGVLTALGC*DSRSAQ Trigger: CTGTGCACTTCTAGAATCCCAGCAGCCAAGAGCCGT...TAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAACACCAGGCTCTGAAACGGATACCCTATGCACAGTCATTCTGGGACAGACATTCCATATTCCCTTaGAAGGGCGTTGTCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AQHQALKRIPYAQSFWDRHSIFP*KGVVSH Trigger: GTGGCTGACAACGCCCTTCCAAGGGAATATGGAATG...TCTGTCCCAGAATGACTGTGCATAGGGTATCCGTTTCAGAGCCTGGTGTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATCTCCCGGAAAAATCATaGCAATGTTGTGCAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PQAVAVVIFGSSCPVTEYLPEKS*QCCARQ Trigger: TTGTCTTGCACAACATTGGCATGATTTTTCCGGGAG...ATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGGGACAGAACAGCATATTTTCTAGAAAGCATACCCTGGCCATTGGACAACACTCGGGGGCAGAGTaGGTCAATGCAGTAGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: ILGQNSIFSRKHTLAIGQHSGAE*VNAVGH Trigger: GTGACCTACTGCATTGACCCACTCTGCCCCCGAGTG...TTGTCCAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCATTGGACAACCTCAATAATGAATGTTCTCATTCCATATTCCCTTGGAAGGGCAGAGTGGGTCAATaGAGTAGGTCACCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: WPLDNLNNECSHSIFPWKGRVGQ*SRSPQA Trigger: GGCCTGTGGTGACCTACTGCATTGACCCACTCTGCC...CTTCCAAGGGAATATGGAATGAGAACATTCATTATTGAGGTTGTCCAATGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCCCGGAAAAATCATGCCAATGTTGTGCAAGACAAACATCTAAATAGCACACATAGGACCCCAGCCTaGGGCCAGCTAGGTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: NSRKNHANVVQDKHLNSTHRTPA*GQLGHL Trigger: CAGATGACCTAGCTGGCCCCAGGCTGGGGTCCTATG...TGTGCTATTTAGATGTTTGTCTTGCACAACATTGGCATGATTTTTCCGGGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATACACCCTTTGAAAGTTaGACTTTGTGCCTTCATTGT | + |
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Preference number: 2 (lower is better) Translates to: PQAVAVVIFGSSCPVTEYTPFES*TLCLHC Trigger: ACAATGAAGGCACAAAGTCCAACTTTCAAAGGGTGT...ATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCATTGGACAACCTCAATAATGAATGTTCTCATTCCATATTCCCTTGGAAGACGGCTCTTGGCTGCTaGGATTCTAGAAGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: WPLDNLNNECSHSIFPWKTALGC*DSRSAQ Trigger: CTGTGCACTTCTAGAATCCCAGCAGCCAAGAGCCGT...CTTCCAAGGGAATATGGAATGAGAACATTCATTATTGAGGTTGTCCAATGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTCCCAGCTGAAATGCTCTGGACCACATCTCAAAATAGCTACAAGACAAAACTCCCGGAAAAATCATaGCAATGTTGTGCAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: DLPAEMLWTTSQNSYKTKLPEKS*QCCARQ Trigger: TTGTCTTGCACAACATTGGCATGATTTTTCCGGGAG...TTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CAA 90 bp | TTCTGGGACAGAACAGCATATTTTCTAGAAAGCATACCCTGGCCATaGGACAACCTCAATAATGAATGTTCTCATTCCATATTCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: FWDRTAYFLESIPWP*DNLNNECSHSIFPW Trigger: CCAAGGGAATATGGAATGAGAACATTCATTATTGAGGTTGTCCAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 72 bp | ATGCAGATGCCTGGCCCTGCACCTGGCTTCCAACCCTaGTCTCCACAGGCTGTGGCTGTGGTTATCTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: MQMPGPAPGFQP*SPQAVAVVIFG Trigger: GCCAAAGATAACCACAGCCACAGCCTGTGGAGACCAGGGTTGGAAGCCAGGTGCAGGGCCAGGCATCTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 72 bp | ACCACAGGCCCTCCTGCCCCAACGGCTCTTGGCTGCTaGGATTCTAGAAGTGCACAGGAAGCCAGTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: TTGPPAPTALGC*DSRSAQEASFP Trigger: TGGAAAACTGGCTTCCTGTGCACTTCTAGAATCCCAGCAGCCAAGAGCCGTTGGGGCAGGAGGGCCTGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 72 bp | TGTCGTCCATCCTCTGTTGGCACAAAGTGGCTCAGCTaGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: CRPSSVGTKWLS*SSASFTPLVPA Trigger: GGCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAACAGAGGATGGACGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 72 bp | CTGCACCTGGCTTCCAACCCTGGTCTCCACAGGCTGTaGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: LHLASNPGLHRL*LWLSLALPALS Trigger: TGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGGAGACCAGGGTTGGAAGCCAGGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR GCA 72 bp | AATCCTGGAATTGGTGAGACAAAGGATGCTCCTGCCTaGTCCACGGTTCACTCGGGGGCAGAGTGGGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: NPGIGETKDAPA*STVHSGAEWVN Trigger: ATTGACCCACTCTGCCCCCGAGTGAACCGTGGAGCAGGCAGGAGCATCCTTTGTCTCACCAATTCCAGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 72 bp | AGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTaGTGCCAGCCAGTTCATGTGGCCACACAAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: SGSAGHQPVSLP*CQPVHVATQML Trigger: AAGCATTTGTGTGGCCACATGAACTGGCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| 3UTR CCA 72 bp | AGGGAAAGGTGTCGTCCATCCTCTGTTGGCACAAAGTaGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RERCRPSSVGTK*LSWSSASFTPL Trigger: CAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAACAGAGGATGGACGACACCTTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATGTCGTCCATCCTCTGTaGGCACAAAGTGGCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PQAVAVVIFGSSCPVTEYVVHPL*AQSGSA Trigger: AGCTGAGCCACTTTGTGCCAACAGAGGATGGACGAC...ATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR GCA 72 bp | CCACAGGCTGTGGCTGTGGTTATCTTTGGCTCTTCCTaGCCTGTCACTGAGTATGGAGTCCTACACCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PQAVAVVIFGSS*PVTEYGVLHPL Trigger: CAAAGGGTGTAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CCA 72 bp | TTCCATATTCCCTTGGAAGGGCGTTGTCAGCCACAGTaGAGGATGTGGTCCCACCCCACCTATCAAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FHIPLEGRCQPQ*RMWSHPTYQGR Trigger: TCTACCTTGATAGGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAATATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR GCA 72 bp | TGTGACGTTGTAACAGTTTGTAGCCAAGGACAAAGCTaGTGTGCCCAGGGTTCTTCCTCTGCAGTGGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: CDVVTVCSQGQS*CAQGSSSAVGT Trigger: TGTACCCACTGCAGAGGAAGAACCCTGGGCACAGCAGCTTTGTCCTTGGCTACAAACTGTTACAACGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR TCA 72 bp | GGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTaGGTATGGAGTCCTACACCCTTTGAAAGTTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GCGYLWLFLPCH*VWSPTPFESWT Trigger: AGTCCAACTTTCAAAGGGTGTAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR GCA 72 bp | AGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATaGTCTGGACCACATCTCAAAATAGCTACAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: SPGGQREISQLK*SGPHLKIATRQ Trigger: TTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR TCA 72 bp | CCTGCCCTGTCACTGAGTATGGAGTCCTACACCCTTTaGAAGTTGGACTTTGTGCCTTCATTGTGTGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: PALSLSMESYTL*KLDFVPSLCDV Trigger: AACGTCACACAATGAAGGCACAAAGTCCAACTTTCAAAGGGTGTAGGACTCCATACTCAGTGACAGGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CCA 72 bp | TGGTGGCCAGAGGGAGATCTCCCAGCTGAAATGCTCTaGACCACATCTCAAAATAGCTACAAGACAAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WWPEGDLPAEML*TTSQNSYKTKV Trigger: CACTTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CCA 72 bp | AACCTCAATAATGAATGTTCTCATTCCATATTCCCTTaGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NLNNECSHSIFP*KGVVSHSGGCG Trigger: ACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAATATGGAATGAGAACATTCATTATTGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCCCAGCTGAAATGCTCTGGACCACATCTCAAAATAGCTACAAGACAAAAGACTTTGTGCCTTCATaGTGTGACGTTGTAACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DLPAEMLWTTSQNSYKTKDFVPS*CDVVTV Trigger: AACTGTTACAACGTCACACAATGAAGGCACAAAGTC...TTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CCA 72 bp | TGGGACAGAACAGCATATTTTCTAGAAAGCATACCCTaGCCATTGGACAACCTCAATAATGAATGTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WDRTAYFLESIP*PLDNLNNECSH Trigger: ATGAGAACATTCATTATTGAGGTTGTCCAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | TGGCACAAAGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCGGTCGCACTGACTTCTaGGGCAGAGACCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WHKVAQLVISQFHSPGASGRTDF*GRDLAW Trigger: CCAGGCCAGGTCTCTGCCTCAGAAGTCAGTGCGACC...GCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCCTTGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCCCACCCAATGGCGGTCGCACTaGCTTCTGAGGCAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLEGRCQPQWRMWSHPTQWRSH*LLRQRP Trigger: AGGTCTCTGCCTCAGAAGTCAGTGCGACCGCCATTG...GGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | GCACAACACCAGGCTCTGAAACGGATACCCTATGCACAGTCATTCTGGGACAGAGGTCGCACTGACTTCTaGGGCAGAGACCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQHQALKRIPYAQSFWDRGRTDF*GRDLAW Trigger: CCAGGCCAGGTCTCTGCCTCAGAAGTCAGTGCGACC...TCTGTCCCAGAATGACTGTGCATAGGGTATCCGTTTCAGAGCCTGGTGTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | TGGCACAAAGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCTGGGCCGGTGCAGGTTaGGCATGTATATCAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: WHKVAQLVISQFHSPGASWAGAG*ACISNA Trigger: AGCATTTGATATACATGCTCAACCTGCACCGGCCCA...GCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCCCACCTATCAAGGCAGAGGACATCCGATaGCAGAGGTGTTTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKGVVSHSGGCGPTPPIKAEDIR*QRCLFW Trigger: CCAGAATAAACACCTCTGCCATCGGATGTCCTCTGC...CTTGATAGGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CAA 72 bp | TGGTGCCAGCCAGTTCATGTGGCCACACAAATGCTTTaGAGGGGCACTTTCCACCATGGCAGATCCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WCQPVHVATQML*RGTFHHGRSPD Trigger: GTCTGGGGATCTGCCATGGTGGAAAGTGCCCCTCAAAAGCATTTGTGTGGCCACATGAACTGGCTGGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CAA 72 bp | AACCCTGGTCTCCACAGGCTGTGGCTGTGGTTATCTTaGGCTCTTCCTGCCCTGTCACTGAGTATGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPGLHRLWLWLS*ALPALSLSMES Trigger: GGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCACAGCCTGTGGAGACCAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGGTGGCCAGAGGGAGATCTCCCAGCTGAAATGCTCTGGACCACATCTCTTCTCTGACTCTTTCTaGAGGCACTCTGTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGGQREISQLKCSGPHLFSDSF*RHSVFS Trigger: GGAGAAGACAGAGTGCCTGCAGAAAGAGTCAGAGAA...GAGATGTGGTCCAGAGCATTTCAGCTGGGAGATCTCCCTCTGGCCACCAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCCCACCTATCAAGGGTGTTTATTCTGGATaGCGAATCTCAGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKGVVSHSGGCGPTPPIKGVYSG*RISALP Trigger: AGGAAGAGCTGAGATTCGCCATCCAGAATAAACACC...CTTGATAGGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACAAAGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGCCAGAGGTGTTTATTCTaGATGGCGAATCTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WHKVAQLVISQFHSPGASQRCLF*MANLSS Trigger: AGAGCTGAGATTCGCCATCCAGAATAAACACCTCTG...GCTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| 3UTR CAA 72 bp | ATGAATGTTCTCATTCCATATTCCCTTGGAAGGGCGTaGTCAGCCACAGTGGAGGATGTGGTCCCACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MNVLIPYSLGRA*SATVEDVVPPH Trigger: GTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAATATGGAATGAGAACATTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGCCAGTTCATGTGGCCACACAAATGCTTTTGAGGGGCACTTTCCACCATGGGCCGGTGCAGGTTaGGCATGTATATCAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPASSCGHTNAFEGHFPPWAGAG*ACISNA Trigger: AGCATTTGATATACATGCTCAACCTGCACCGGCCCA...TGGTGGAAAGTGCCCCTCAAAAGCATTTGTGTGGCCACATGAACTGGCTGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR GCA 90 bp | TCCCACCCCACCTATCAAGGTAGACACTTCTGCCTGAATCCCATTAGTGGGATCATGCAGGTGGGCCGGTaGAGGTTGAGCATGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: SHPTYQGRHFCLNPISGIMQVGR*RLSMYI Trigger: GATATACATGCTCAACCTGCACCGGCCCACCTGCAT...GATCCCACTAATGGGATTCAGGCAGAAGTGTCTACCTTGATAGGTGGGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR GCA 90 bp | GATCTCCCAGCTGAAATGCTCTGGACCACATCTCAAAATAGCTACAAGACAAAATCTGAGCCCGGACGATaGAGGTGGGCCGGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLPAEMLWTTSQNSYKTKSEPGR*RWAGAG Trigger: ACCTGCACCGGCCCACCTGCATCGTCCGGGCTCAGA...TTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCACAAAGTGGCTCAGCTGGTCATCAGCCAGTTTCACTCCCCTGGTGCCAGGGTGTTTATTCTGGATaGCGAATCTCAGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQSGSAGHQPVSLPWCQGVYSG*RISALP Trigger: AGGAAGAGCTGAGATTCGCCATCCAGAATAAACACC...CTGGCACCAGGGGAGTGAAACTGGCTGATGACCAGCTGAGCCACTTTGTGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCCCTTGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCAGAGGTGTTTATTCTaGATGGCGAATCTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHIPLEGRCQPQWRMWSHQRCLF*MANLSS Trigger: AGAGCTGAGATTCGCCATCCAGAATAAACACCTCTG...GTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCAAGGGAATATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGTGGTTATCTTTGGCTCTTCCTGCCCTGTCACTGAGTATGGAGTCCTATTCTCTGACTCTTTCTaGAGGCACTCTGTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVIFGSSCPVTEYGVLFSDSF*RHSVFS Trigger: GGAGAAGACAGAGTGCCTGCAGAAAGAGTCAGAGAA...TAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACCACAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGGCGTTGTCAGCCACAGTGGAGGATGTGGTCCCACCCCACCTATCAAGTCTTGTTTCGACACTTaGCAGCAGCAATTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKGVVSHSGGCGPTPPIKSCFDT*QQQFYF Trigger: GAAATAAAATTGCTGCTGCCAAGTGTCGAAACAAGA...CTTGATAGGTGGGGTGGGACCACATCCTCCACTGTGGCTGACAACGCCCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGGACAGAACAGCATATTTTCTAGAAAGCATACCCTGGCCATTGGACAACAATGGCGGTCGCACTaGCTTCTGAGGCAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILGQNSIFSRKHTLAIGQQWRSH*LLRQRP Trigger: AGGTCTCTGCCTCAGAAGTCAGTGCGACCGCCATTG...TTGTCCAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR GCA 90 bp | GATCTCCCAGCTGAAATGCTCTGGACCACATCTCAAAATAGCTACAAGACAAAAATGCAGGTGGGCCGGTaGAGGTTGAGCATGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: DLPAEMLWTTSQNSYKTKMQVGR*RLSMYI Trigger: GATATACATGCTCAACCTGCACCGGCCCACCTGCAT...TTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGCCAGTTCATGTGGCCACACAAATGCTTTTGAGGGGCACTTTCCACCATCTTGTTTCGACACTTaGCAGCAGCAATTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPASSCGHTNAFEGHFPPSCFDT*QQQFYF Trigger: GAAATAAAATTGCTGCTGCCAAGTGTCGAAACAAGA...TGGTGGAAAGTGCCCCTCAAAAGCATTTGTGTGGCCACATGAACTGGCTGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGGACAGAACAGCATATTTTCTAGAAAGCATACCCTGGCCATTGGACAAACTCTCCAGTTTCTCTaGCTCTTTCTGCAGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGQNSIFSRKHTLAIGQTLQFL*LFLQAL Trigger: GAGTGCCTGCAGAAAGAGTCAGAGAAACTGGAGAGT...TTGTCCAATGGCCAGGGTATGCTTTCTAGAAAATATGCTGTTCTGTCCCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS CCA 90 bp | ACTGACTCCAGCGCAGAGGACATCCGATGGCAGAGGTGTTTATTCTaGATGGCGAATCTCAGCTCTTCCTTGACAAAGGGTGTCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TDSSAEDIRWQRCLF*MANLSSSLTKGVRL Trigger: TAACCTGACACCCTTTGTCAAGGAAGAGCTGAGATTCGCCATCCAGAATAAACACCTCTGCCATCGGATGTCCTCTGCGCTGGAGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGCCAGTTCATGTGGCCACACAAATGCTTTTGAGGGGCACTTTCCACCAGTCTTCTCCTTTTTCTaGTTTCGACACTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPASSCGHTNAFEGHFPPVFSFF*FRHLAA Trigger: TGCTGCCAAGTGTCGAAACAAGAAAAAGGAGAAGAC...TGGTGGAAAGTGCCCCTCAAAAGCATTTGTGTGGCCACATGAACTGGCTGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CAA 90 bp | GATCTCCCAGCTGAAATGCTCTGGACCACATCTCAAAATAGCTACAAGACAAAAGTGGGCCGGTGCAGGTaGAGCATGTATATCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: DLPAEMLWTTSQNSYKTKVGRCR*SMYIKC Trigger: GCATTTGATATACATGCTCAACCTGCACCGGCCCAC...TTTTGTCTTGTAGCTATTTTGAGATGTGGTCCAGAGCATTTCAGCTGGGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCACTTTCCACCATGGCAGATCCCCAGACTCTCAGAAATCAGATCTGATTCCTTCTTTTATCTGTaGGATAAAGAGGTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGHFPPWQIPRLSEIRSDSFFYL*DKEVPL Trigger: GAGAGGAACCTCTTTATCCAACAGATAAAAGAAGGA...ATCAGATCTGATTTCTGAGAGTCTGGGGATCTGCCATGGTGGAAAGTGCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCATTGGACAACCTCAATAATGAATGTTCTCATTCCATATTCCCTTGGAAGGTGGGCCGGTGCAGGTaGAGCATGTATATCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: WPLDNLNNECSHSIFPWKVGRCR*SMYIKC Trigger: GCATTTGATATACATGCTCAACCTGCACCGGCCCAC...CTTCCAAGGGAATATGGAATGAGAACATTCATTATTGAGGTTGTCCAATGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS-3UTR CAA 90 bp | AACTCCCGGAAAAATCATGCCAATGTTGTGCAAGACAAACATCTAAATAGCACAGTCTTCTCCTTTTTCTaGTTTCGACACTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSRKNHANVVQDKHLNSTVFSFF*FRHLAA Trigger: TGCTGCCAAGTGTCGAAACAAGAAAAAGGAGAAGAC...TGTGCTATTTAGATGTTTGTCTTGCACAACATTGGCATGATTTTTCCGGGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS TCA 72 bp | AAGAGGTTCCTCTCGTCTTCCGGTGTCCGTCCATTCTaGGCCCGGACGATGCAGGTGGGCCGGTGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KRFLSSSGVRPF*ARTMQVGRCRL Trigger: CAACCTGCACCGGCCCACCTGCATCGTCCGGGCTCAGAATGGACGGACACCGGAAGACGAGAGGAACCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS CAA 90 bp | GGGGCCGCCTCAGACTTGGTGACTGACATCTCCAGGGGTCTGTTGTaGACGGTAACTGACTCCAGCGCAGAGGACATCCGATGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GAASDLVTDISRGLL*TVTDSSAEDIRWQR Trigger: CCTCTGCCATCGGATGTCCTCTGCGCTGGAGTCAGTTACCGTCAACAACAGACCCCTGGAGATGTCAGTCACCAAGTCTGAGGCGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS TCA 72 bp | CAGGAGGTGAGAGGCAGGGGACAATGGCGGTCGCACTaGCTTCTGAGGCAGAGACCTGGCCTGGATGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QEVRGRGQWRSH*LLRQRPGLDVE Trigger: TTCAACATCCAGGCCAGGTCTCTGCCTCAGAAGTCAGTGCGACCGCCATTGTCCCCTGCCTCTCACCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS CAA 90 bp | TCAGGGGCCGCCTCAGACTTGGTGACTGACATCTCCAGGGGTCTGTaGTTGACGGTAACTGACTCCAGCGCAGAGGACATCCGATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGAASDLVTDISRGL*LTVTDSSAEDIRWQ Trigger: CTGCCATCGGATGTCCTCTGCGCTGGAGTCAGTTACCGTCAACAACAGACCCCTGGAGATGTCAGTCACCAAGTCTGAGGCGGCCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS CAA 72 bp | GCCTCAGACTTGGTGACTGACATCTCCAGGGGTCTGTaGTTGACGGTAACTGACTCCAGCGCAGAGGACATC | + |
|
Preference number: 6 (lower is better) Translates to: ASDLVTDISRGL*LTVTDSSAEDI Trigger: GATGTCCTCTGCGCTGGAGTCAGTTACCGTCAACAACAGACCCCTGGAGATGTCAGTCACCAAGTCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
||
| CDS CAA 72 bp | TCAGACTTGGTGACTGACATCTCCAGGGGTCTGTTGTaGACGGTAACTGACTCCAGCGCAGAGGACATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SDLVTDISRGLL*TVTDSSAEDIR Trigger: TCGGATGTCCTCTGCGCTGGAGTCAGTTACCGTCAACAACAGACCCCTGGAGATGTCAGTCACCAAGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| CDS CCA 72 bp | AGCGCAGAGGACATCCGATGGCAGAGGTGTTTATTCTaGATGGCGAATCTCAGCTCTTCCTTGACAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SAEDIRWQRCLF*MANLSSSLTKG Trigger: ACCCTTTGTCAAGGAAGAGCTGAGATTCGCCATCCAGAATAAACACCTCTGCCATCGGATGTCCTCTGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| CDS CAA 90 bp | CGATGGCAGAGGTGTTTATTCTGGATGGCGAATCTCAGCTCTTCCTaGACAAAGGGTGTCAGGTTAGCAAAATCCTCAAATACCAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RWQRCLFWMANLSSS*TKGVRLAKSSNTSD Trigger: GTCACTGGTATTTGAGGATTTTGCTAACCTGACACCCTTTGTCAAGGAAGAGCTGAGATTCGCCATCCAGAATAAACACCTCTGCCATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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| CDS CAA 72 bp | AGGCACTCTGTCTTCTCCTTTTTCTTGTTTCGACACTaGGCAGCAGCAATTTTATTTCTTTCTCGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RHSVFSFFLFRH*AAAILFLSRRL Trigger: GAGGCGGCGAGAAAGAAATAAAATTGCTGCTGCCAAGTGTCGAAACAAGAAAAAGGAGAAGACAGAGTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027941.14 ENSMUST00000195117.2 |
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