Pregenerated sensors for ATF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027104Ensembl transcript IDs: ENSMUST00000055833.12, ENSMUST00000090802.11, ENSMUST00000100009.11, ENSMUST00000112007.8, ENSMUST00000112010.9, ENSMUST00000112016.9, ENSMUST00000112017.8, ENSMUST00000124737.8, ENSMUST00000128531.8, ENSMUST00000136958.8, ENSMUST00000154456.8, ENSMUST00000173010.8
Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGAGGAGCCATGACAATCTGTGAAAGTGCAGGCTCCGTGCTCTaGTCCGCCATCTGGGTGAGGACTGAAGTGGCTACAGCTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: EGGAMTICESAGSVL*SAIWVRTEVATASA Trigger: AGCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTTCACAGATTGTCATGGCTCCTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| 3UTR CCA 90 bp | AACTGTTGCACTGCAGGTTTTAATCAACTTCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACAATCTGTGAAAGTGCAGGCTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: NCCTAGFNQLPEGCA*EGGAMTICESAGSV Trigger: CACGGAGCCTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGGAAGTTGATTAAAACCTGCAGTGCAACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124737.8 ENSMUST00000173010.8 |
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| 3UTR TCA 90 bp | TTTCCCAGATTGGAACTTAGGAGGCAGGTGGGGTGGGTGTTCCCCTaGACTCTCAAGGGCATTCCATACGGCTTTGGAAACGTCAATCTC | + |
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Preference number: 1 (lower is better) Translates to: FPRLELRRQVGWVFP*TLKGIPYGFGNVNL Trigger: GAGATTGACGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCTGCCTCCTAAGTTCCAATCTGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR GCA 90 bp | GCTTTTGATGTTGAACTGACTCCATTGGATGTGCTGACAGAGCTGTaGTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: AFDVELTPLDVLTEL*WIASVCGLLGTERS Trigger: AGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCACAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAACATCAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| 3UTR TCA 90 bp | TTTAAAACGAGCGCTGTCCACCGTGGAAGGTCATTCCCCGTCACATaGCTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATC | + |
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Preference number: 1 (lower is better) Translates to: FKTSAVHRGRSFPVT*LLTSMHFYFTIARI Trigger: GATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAGCGCTCGTTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR GCA 90 bp | TCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATaGACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: STVEGHSPSHDFSHL*TSTLQLQGSVTKEL Trigger: CAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR GCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTaGCAGCATCACACTGAAGGCATCGTTAAACATTCAAGCAATATC | + |
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Preference number: 1 (lower is better) Translates to: IQACTVMASETAVIY*QHHTEGIVKHSSNI Trigger: GATATTGCTTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR GCA 90 bp | TTTCATCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTaGACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: FHQNKLHHGMLVIQA*TVMASETAVIYCQH Trigger: ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR GCA 90 bp | ACAACTTATTATAAACACATTACAGGTATTTACAGAATGGAATCCTaGTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATT | + |
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Preference number: 1 (lower is better) Translates to: TTYYKHITGIYRMES*LNARSCYWVGLITI Trigger: AATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAATACCTGTAATGTGTTTATAATAAGTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCTCCGTGCTCTGGTCCGCCATCTGGGTGAGGACTGAAGTGGCTACAGCTCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
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Preference number: 2 (lower is better) Translates to: AGSVLWSAIWVRTEVATALHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...AGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGCACGGAGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGGGTGGGTGTTCCCCTaGACTCTCAAGGGCATTCCA | + |
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Preference number: 2 (lower is better) Translates to: WGGCSPELSRAFHTALETGWVFP*TLKGIP Trigger: TGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCC...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTAGAGGGTGCAGAGGGTaGCACATGGAGGCTCTGACC | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTRGCRG*HMEALT Trigger: GGTCAGAGCCTCCATGTGTCACCCTCTGCACCCTCT...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGCATCACATCTCAGGGTaGAGGGGTGGGCAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: WGGCSPELSRAFHTALETHHISG*RGGQRN Trigger: ATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATG...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
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Preference number: 2 (lower is better) Translates to: IQACTVMASETAVIYCQHPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTCATCACATCTCAGGGTaGAGGGGTGGGCAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTHHISG*RGGQRN Trigger: ATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATG...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTGACACATGGAGGCTCTaGCCAACCTTATCCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTDTWRL*PTLSIY Trigger: GTAGATGGATAAGGTTGGTCAGAGCCTCCATGTGTC...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAACTTAGGAGGCAGGTaGGGTGGGTGTTCCCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HMEALTNLIHLQQKACMGNLGGR*GGCSPE Trigger: TTCAGGGGAACACCCACCCCACCTGCCTCCTAAGTT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTGCATGTTTCCCAGATTaGAACTTAGGAGGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTACFPD*NLGGRW Trigger: CCACCTGCCTCCTAAGTTCCAATCTGGGAAACATGC...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
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Preference number: 2 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAGGGTGGGTGTTCCCCTaGACTCTCAAGGGCATTCCA | + |
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Preference number: 2 (lower is better) Translates to: EALTNLIHLQQKACMGNSGWVFP*TLKGIP Trigger: TGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCC...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATAGAGGGTGCAGAGGGTaGCACATGGAGGCTCTGACC | + |
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Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDRGCRG*HMEALT Trigger: GGTCAGAGCCTCCATGTGTCACCCTCTGCACCCTCT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGCCAGAAGTTGCTACTaGGTAGGACTCATAACTATT | + |
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Preference number: 2 (lower is better) Translates to: WGGCSPELSRAFHTALETARSCY*VGLITI Trigger: AATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGC...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGCATCACATCTCAGGGTaGAGGGGTGGGCAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: HMEALTNLIHLQQKACMGHHISG*RGGQRN Trigger: ATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATG...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LERQKLLLGRTHNYFTKFKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAGAACAAGCTACATCATaGAATGTTAGTTATCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: RWGGCSPELSRAFHTALEEQATS*NVSYPS Trigger: GCTTGGATAACTAACATTCCATGATGTAGCTTGTTC...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCACAGTAATGGCATCTaGAACTGCAGTCATCTATTG | + |
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Preference number: 2 (lower is better) Translates to: CPPWKVIPRHMTSHIYALHSNGI*NCSHLL Trigger: CAATAGATGACTGCAGTTTCAGATGCCATTACTGTG...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTCAGATGACTGGAGAATaGGCAAAGTGTAACTACAAT | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTQMTGE*AKCNYN Trigger: ATTGTAGTTACACTTTGCTCATTCTCCAGTCATCTG...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCGGGTGGGTGTTCCCCTaGACTCTCAAGGGCATTCCA | + |
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Preference number: 2 (lower is better) Translates to: MHFYFTIARICYQRTEACGWVFP*TLKGIP Trigger: TGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCC...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAAGAGGGTGCAGAGGGTaGCACATGGAGGCTCTGACC | + |
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Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSRGCRG*HMEALT Trigger: GGTCAGAGCCTCCATGTGTCACCCTCTGCACCCTCT...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGATGAAAGAAAAATGTTaGGAGGGTGCAGAGGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: HMEALTNLIHLQQKACMGMKEKC*EGAEGD Trigger: GTCACCCTCTGCACCCTCTCAACATTTTTCTTTCAT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | GCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCCAGACTAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
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Preference number: 2 (lower is better) Translates to: AQKGLLNCHLYQQYDSQTSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...AGTCTGGCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTAGTTATCCAAGCCTaGACAGTAATGGCATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTLVIQA*TVMASE Trigger: TTCAGATGCCATTACTGTGCAGGCTTGGATAACTAA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTAAACTGGTCTTTCCTTaGTTTCCCTTTGAAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: CPPWKVIPRHMTSHIYALKLVFP*FPFEVT Trigger: AGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTT...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGCACAGTAATGGCATCTaGAACTGCAGTCATCTATTG | + |
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Preference number: 2 (lower is better) Translates to: HMEALTNLIHLQQKACMGHSNGI*NCSHLL Trigger: CAATAGATGACTGCAGTTTCAGATGCCATTACTGTG...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATGACACATGGAGGCTCTaGCCAACCTTATCCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDDTWRL*PTLSIY Trigger: GTAGATGGATAAGGTTGGTCAGAGCCTCCATGTGTC...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTGGGAGGGAGGAGCCATaGCAATCTGTGAAAGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LERQKLLLGRTHNYFTKFGREEP*QSVKVQ Trigger: CTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCC...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCAGCAGTATGATAGCCAGACTTCTTCTGCATGGCAGTTACAGGGCAATCTTCATTTCTCAGCAGGGTaGCTTCGCTCTATTTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YQQYDSQTSSAWQLQGNLHFSAG*LRSILW Trigger: CCACAAAATAGAGCGAAGTCACCCTGCTGAGAAATG...AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTGGCTATCATACTGCTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCGCATAAATGCAAACTaGTCTTTCCTTGATTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: CPPWKVIPRHMTSHIYALRINAN*SFLDFP Trigger: AGGGAAATCAAGGAAAGACCAGTTTGCATTTATGCG...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTGAACAAGCTACATCATaGAATGTTAGTTATCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTEQATS*NVSYPS Trigger: GCTTGGATAACTAACATTCCATGATGTAGCTTGTTC...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: EQATSWNVSYPSLHSNGIWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATTGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGTGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: MHFYFTIARICYQRTEACSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAAACTTAGGAGGCAGGTaGGGTGGGTGTTCCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSNLGGR*GGCSPE Trigger: TTCAGGGGAACACCCACCCCACCTGCCTCCTAAGTT...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCACATCACATCTCAGGGTaGAGGGGTGGGCAAAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NLKNIAGRWMTLISLRSAHHISG*RGGQRN Trigger: ATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATG...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCACACAGTAATGGCATCTaGAACTGCAGTCATCTATTG | + |
|
Preference number: 2 (lower is better) Translates to: EALTNLIHLQQKACMGNSHSNGI*NCSHLL Trigger: CAATAGATGACTGCAGTTTCAGATGCCATTACTGTG...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATTTAGTTATCCAAGCCTaGACAGTAATGGCATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IQACTVMASETAVIYCQHLVIQA*TVMASE Trigger: TTCAGATGCCATTACTGTGCAGGCTTGGATAACTAA...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATTTGAACGCCAGAAGTTaGTACTGGGTAGGACTCATA | + |
|
Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDLNARS*YWVGLI Trigger: TATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAA...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGACTTCTCACATCTATaGACTTCTACTTTACAATTG | + |
|
Preference number: 2 (lower is better) Translates to: CPPWKVIPRHMTSHIYALDFSHL*TSTLQL Trigger: CAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTC...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATCGCATAAATGCAAACTaGTCTTTCCTTGATTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IQACTVMASETAVIYCQHRINAN*SFLDFP Trigger: AGGGAAATCAAGGAAAGACCAGTTTGCATTTATGCG...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTGCCAGAAGTTGCTACTaGGTAGGACTCATAACTATT | + |
|
Preference number: 2 (lower is better) Translates to: GILLERQKLLLGRTHNYFARSCY*VGLITI Trigger: AATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGC...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAGCAATAATGTAGTATaGATGCAGAACAGACTACAC | + |
|
Preference number: 2 (lower is better) Translates to: HMEALTNLIHLQQKACMGSNNVV*MQNRLH Trigger: GTGTAGTCTGTTCTGCATCCATACTACATTATTGCT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTAAACTGGTCTTTCCTTaGTTTCCCTTTGAAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: GILLERQKLLLGRTHNYFKLVFP*FPFEVT Trigger: AGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAAAACTGGTCTTTCCTTaGTTTCCCTTTGAAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: EALTNLIHLQQKACMGNSKLVFP*FPFEVT Trigger: AGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTT...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: NLKNIAGRWMTLISLRSAWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTTGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: LERQKLLLGRTHNYFTKFWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATCACAGTAATGGCATCTaGAACTGCAGTCATCTATTG | + |
|
Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDHSNGI*NCSHLL Trigger: CAATAGATGACTGCAGTTTCAGATGCCATTACTGTG...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCATTAGTTATCCAAGCCTaGACAGTAATGGCATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: EALTNLIHLQQKACMGNSLVIQA*TVMASE Trigger: TTCAGATGCCATTACTGTGCAGGCTTGGATAACTAA...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGCTACAACAAAAAGCTTaGATGGGGAATTCATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: HMEALTNLIHLQQKACMGLQQKA*MGNSCF Trigger: AAAACATGAATTCCCCATGCAAGCTTTTTGTTGTAG...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTCGCATAAATGCAAACTaGTCTTTCCTTGATTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GILLERQKLLLGRTHNYFRINAN*SFLDFP Trigger: AGGGAAATCAAGGAAAGACCAGTTTGCATTTATGCG...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCATGGAAGTGGGAAGAGTaGTTCAGTAACACCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSWKWEE*FSNTPI Trigger: AATGGGGGTGTTACTGAATCACTCTTCCCACTTCCA...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCATCACATCTCAGGGTaGAGGGGTGGGCAAAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHHHISG*RGGQRN Trigger: ATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR TCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTTTGGCTACTAAAAGATaGCAGTGCTTTCACAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GILLERQKLLLGRTHNYFLATKR*QCFHKN Trigger: ATTCTTGTGAAAGCACTGTCATCTTTTAGTAGCCAA...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATCATGTTTTGTGCCTTTaGGATCAACTCCTTAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDHVLCL*DQLLSI Trigger: TATGCTAAGGAGTTGATCTCAAAGGCACAAAACATG...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTCATTCCCCGTCACATaGCTTCTCACATCTATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQISFPVT*LLTSMH Trigger: GTGCATAGATGTGAGAAGTCATGTGACGGGGAATGA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCATCATTCCCCGTCACATaGCTTCTCACATCTATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSSFPVT*LLTSMH Trigger: GTGCATAGATGTGAGAAGTCATGTGACGGGGAATGA...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCTACAGAATGGAATCCTaGTTGAACGCCAGAAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: MHFYFTIARICYQRTEACYRMES*LNARSC Trigger: GCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTA...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTAATTTTAGGCTTTTCTaGCAACCACATCACACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GILLERQKLLLGRTHNYFNFRLF*QPHHTS Trigger: AGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTTGGCTACTAAAAGATaGCAGTGCTTTCACAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: EQATSWNVSYPSLHSNGILATKR*QCFHKN Trigger: ATTCTTGTGAAAGCACTGTCATCTTTTAGTAGCCAA...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTCACAGTAATGGCATCTaGAACTGCAGTCATCTATTG | + |
|
Preference number: 2 (lower is better) Translates to: LERQKLLLGRTHNYFTKFHSNGI*NCSHLL Trigger: CAATAGATGACTGCAGTTTCAGATGCCATTACTGTG...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCATTGCTGAGTACAGACTaGTTTAAAACGAGCGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSLLSTD*FKTSAV Trigger: GACAGCGCTCGTTTTAAATCAGTCTGTACTCAGCAA...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTTGAACGCCAGAAGTTaGTACTGGGTAGGACTCATA | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQILNARS*YWVGLI Trigger: TATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATAGCAATAATGTAGTATaGATGCAGAACAGACTACAC | + |
|
Preference number: 2 (lower is better) Translates to: PRHMTSHIYALLLYNCKDSNNVV*MQNRLH Trigger: GTGTAGTCTGTTCTGCATCCATACTACATTATTGCT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTTGGCTACTAAAAGATaGCAGTGCTTTCACAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: MLVIQACTVMASETAVIYLATKR*QCFHKN Trigger: ATTCTTGTGAAAGCACTGTCATCTTTTAGTAGCCAA...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAAAATTTTAGGCTTTTCTaGCAACCACATCACACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KLQSSIASITLKASLNIQNFRLF*QPHHTS Trigger: AGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATT...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGCCAGAAGTTGCTACTaGGTAGGACTCATAACTATT | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQIARSCY*VGLITI Trigger: AATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCCAGACTCTTCGCTCTATTTTGTaGATAATTAGAATCCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AQKGLLNCHLYQQYDSQTLRSIL*IIRILQ Trigger: CTGAAGGATTCTAATTATCCACAAAATAGAGCGAAG...AGTCTGGCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| 3UTR CAA 90 bp | CATTACAGGTATTTACAGAATGGAATCCTGCTTGAACGCCAGAAGTaGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: HYRYLQNGILLERQK*LLGRTHNYFTKFSY Trigger: GTAAGAAAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAATACCTGTAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCAAACTGGTCTTTCCTTaGTTTCCCTTTGAAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: SHNFRLFWQPHHTSLCISKLVFP*FPFEVT Trigger: AGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTT...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCAGATGACTGGAGAATaGGCAAAGTGTAACTACAAT | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQIQMTGE*AKCNYN Trigger: ATTGTAGTTACACTTTGCTCATTCTCCAGTCATCTG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCGCATAAATGCAAACTaGTCTTTCCTTGATTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQIRINAN*SFLDFP Trigger: AGGGAAATCAAGGAAAGACCAGTTTGCATTTATGCG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTAATTTTAGGCTTTTCTaGCAACCACATCACACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LERQKLLLGRTHNYFTKFNFRLF*QPHHTS Trigger: AGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATT...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCAATTTTAGGCTTTTCTaGCAACCACATCACACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: MHFYFTIARICYQRTEACNFRLF*QPHHTS Trigger: AGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATT...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR CAA 90 bp | TTTTGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTaGATTAGTCTAAGAAGTGCACAAAGCACTAACCGTCTTACCATA | + |
|
Preference number: 2 (lower is better) Translates to: FCLLNLKNIAGRWMT*ISLRSAQSTNRLTI Trigger: TATGGTAAGACGGTTAGTGCTTTGTGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAAACTGGTCTTTCCTTaGTTTCCCTTTGAAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: CLLNLKNIAGRWMTLISLKLVFP*FPFEVT Trigger: AGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTT...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTACGCATAAATGCAAACTaGTCTTTCCTTGATTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLLNLKNIAGRWMTLISLRINAN*SFLDFP Trigger: AGGGAAATCAAGGAAAGACCAGTTTGCATTTATGCG...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAAGCAATAATGTAGTATaGATGCAGAACAGACTACAC | + |
|
Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSSNNVV*MQNRLH Trigger: GTGTAGTCTGTTCTGCATCCATACTACATTATTGCT...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR CAA 90 bp | ACTTATTATAAACACATTACAGGTATTTACAGAATGGAATCCTGCTaGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TYYKHITGIYRMESC*NARSCYWVGLITIL Trigger: TAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAATACCTGTAATGTGTTTATAATAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCACTACAACAAAAAGCTTaGATGGGGAATTCATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NIRTQNARYRSSVTSWNSLQQKA*MGNSCF Trigger: AAAACATGAATTCCCCATGCAAGCTTTTTGTTGTAG...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR GCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCTTCTACTTTACAATTaGAAGGATCTGTTACCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQILLLYN*KDLLPK Trigger: CTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGACTTCTCACATCTATaGACTTCTACTTTACAATTG | + |
|
Preference number: 2 (lower is better) Translates to: STLQLQGSVTKELKLAQIDFSHL*TSTLQL Trigger: CAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATAATTTTAGGCTTTTCTaGCAACCACATCACACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHNFRLF*QPHHTS Trigger: AGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATT...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR TCA 72 bp | TTGGAACTTAGGAGGCAGGTGGGGTGGGTGTTCCCCTaGACTCTCAAGGGCATTCCATACGGCTTTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LELRRQVGWVFP*TLKGIPYGFGN Trigger: GTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCTGCCTCCTAAGTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAACTTGAACGCCAGAAGTaGCTACTGGGTAGGACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RWGGCSPELSRAFHTALELERQK*LLGRTH Trigger: ATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGCATGTTTCCCAGATaGGAACTTAGGAGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTCMFPR*ELRRQV Trigger: CACCTGCCTCCTAAGTTCCAATCTGGGAAACATGCA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR GCA 72 bp | GTTGAACTGACTCCATTGGATGTGCTGACAGAGCTGTaGTGGATCGCTTCTGTATGTGGACTGCTTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VELTPLDVLTEL*WIASVCGLLGT Trigger: TGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCACAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTAGAATGGAATCCTGCTaGAACGCCAGAAGTTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CPPWKVIPRHMTSHIYALRMESC*NARSCY Trigger: GTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCT...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR TCA 72 bp | AGCGCTGTCCACCGTGGAAGGTCATTCCCCGTCACATaGCTTCTCACATCTATGCACTTCTACTTTACAATT | + |
|
Preference number: 3 (lower is better) Translates to: SAVHRGRSFPVT*LLTSMHFYFTI Trigger: AATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCATAAGCGTCTCACTTaGTTACCTGAAATCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CPPWKVIPRHMTSHIYALHKRLT*LPEICK Trigger: TTTGCAGATTTCAGGTAACAAAGTGAGACGCTTATG...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCTACAACAAAAAGCTaGCATGGGGAATTCATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTSTTKS*HGEFMF Trigger: AAACATGAATTCCCCATGCAAGCTTTTTGTTGTAGA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCCTTGAACGCCAGAAGTaGCTACTGGGTAGGACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: MHFYFTIARICYQRTEACLERQK*LLGRTH Trigger: ATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR GCA 72 bp | GAAGGTCATTCCCCGTCACATGACTTCTCACATCTATaGACTTCTACTTTACAATTGCAAGGATCTGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: EGHSPSHDFSHL*TSTLQLQGSVT Trigger: GGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTGCATGTTTCCCAGATaGGAACTTAGGAGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: STLQLQGSVTKELKLAQICMFPR*ELRRQV Trigger: CACCTGCCTCCTAAGTTCCAATCTGGGAAACATGCA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR GCA 72 bp | TATAAACACATTACAGGTATTTACAGAATGGAATCCTaGTTGAACGCCAGAAGTTGCTACTGGGTAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: YKHITGIYRMES*LNARSCYWVGL Trigger: GAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAATACCTGTAATGTGTTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAACATAAGCGTCTCACTTaGTTACCTGAAATCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLQSSIASITLKASLNIQHKRLT*LPEICK Trigger: TTTGCAGATTTCAGGTAACAAAGTGAGACGCTTATG...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR GCA 72 bp | AACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTaGACAGTAATGGCATCTGAAACTGCAGTCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: NKLHHGMLVIQA*TVMASETAVIY Trigger: ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR GCA 72 bp | ATTTACAGAATGGAATCCTGCTTGAACGCCAGAAGTTaGTACTGGGTAGGACTCATAACTATTTTACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IYRMESCLNARS*YWVGLITILQS Trigger: ACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR CCA 72 bp | AGAATGGAATCCTGCTTGAACGCCAGAAGTTGCTACTaGGTAGGACTCATAACTATTTTACAAAGTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RMESCLNARSCY*VGLITILQSFL Trigger: AAGAAAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCTCTACAACAAAAAGCTaGCATGGGGAATTCATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MHFYFTIARICYQRTEACSTTKS*HGEFMF Trigger: AAACATGAATTCCCCATGCAAGCTTTTTGTTGTAGA...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR GCA 72 bp | CCAGAGACTAAAAACATATTCAGTCTGATCATCAACTaGTGCTATACCAACTCCAGAGACAAATTTAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: PETKNIFSLIIN*CYTNSRDKFNF Trigger: GAAGTTAAATTTGTCTCTGGAGTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| 3UTR TCA 72 bp | GATAATGGCACATTAGAAAACTCAGTATTCCACAGATaGCTGGAGAATGAGCAAAGTGTAACTACAATCATT | + |
|
Preference number: 3 (lower is better) Translates to: DNGTLENSVFHR*LENEQSVTTII Trigger: AATGATTGTAGTTACACTTTGCTCATTCTCCAGTCATCTGTGGAATACTGAGTTTTCTAATGTGCCATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR GCA 72 bp | GAGACTAAAAACATATTCAGTCTGATCATCAACTGCTaGTATACCAACTCCAGAGACAAATTTAACTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ETKNIFSLIINC*YTNSRDKFNFK Trigger: CTTGAAGTTAAATTTGTCTCTGGAGTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| 3UTR CCA 72 bp | TTTTGTTTACTTAATCTTAAAAACATTGCAGGGCGATaGATGACCTTGATTAGTCTAAGAAGTGCACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FCLLNLKNIAGR*MTLISLRSAQS Trigger: GCTTTGTGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| 3UTR TCA 72 bp | ATTAGAAAACTCAGTATTCCACAGATGACTGGAGAATaGGCAAAGTGTAACTACAATCATTTCATCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: IRKLSIPQMTGE*AKCNYNHFIRT Trigger: TGTTCTGATGAAATGATTGTAGTTACACTTTGCTCATTCTCCAGTCATCTGTGGAATACTGAGTTTTCTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCCGTGCTCTGGTCCGCCATCTGGGTGAGGACTGAAGTGGCTACAGCTGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSVLWSAIWVRTEVATAVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...AGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGCACGGAGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGTTGGCGTTGGAGTCTaGTCTGGCCACACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETVGVGV*SGHTQG Trigger: CCCCTGGGTGTGGCCAGATCAGACTCCAACGCCAAC...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGGTCCGCCATCTGGGTaGGGACTGAAGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETGPPSG*GLKWLQ Trigger: CTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACC...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWGGCSPELSRAFHTALEKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCTCCGTGCTCTGGTCCGCCATCTGGGTGAGGACTGAAGTGGCTACAGCTGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGSVLWSAIWVRTEVATAGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...AGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGCACGGAGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CWIASVCGLLGTERSSELEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGGTCCGCCATCTGGGTaGGGACTGAAGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALGPPSG*GLKWLQ Trigger: CTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACC...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RWGGCSPELSRAFHTALESHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCCTGGGAGGGAGGAGCCATGACAATCTGTGAAAGTGCAGGCTCCGTGCTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCAWEGGAMTICESAGSVLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...CACGGAGCCTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCCAGGCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTCSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAACCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: RWGGCSPELSRAFHTALEPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCCTGGGAGGGAGGAGCCATGACAATCTGTGAAAGTGCAGGCTCCGTGATCTTTATCAGCAGCTaGAGCTGGCCATTTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCAWEGGAMTICESAGSVIFISS*SWPFSE Trigger: TTCACTAAATGGCCAGCTGCAGCTGCTGATAAAGAT...CACGGAGCCTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCCAGGCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTRAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALCSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAATTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RWGGCSPELSRAFHTALELSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALLHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGCCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | GGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYVDCLAQKGLLNCHRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...ATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WIASVCGLLGTERSSELSCSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...TGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCACCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTGTTGGCGTTGGAGTCTaGTCAGCCACAATGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: AGSLLYVDCLAQKGLLNCVGVGV*SATMTL Trigger: CAGTGTCATTGTGGCTGATCAGACTCCAACGCCAAC...ACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTAGGATGGTGCCTGGGTaGTTACAGTACTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTRMVPG*LQYLRL Trigger: CAACCTCAAGTACTGTAATCACCCAGGCACCATCCT...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | GGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYVDCLAQKGLLNCHDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...ATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR CCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCAAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WIASVCGLLGTERSSELSRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...TGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATCTCTGGTCCGCCATCTaGGTGAGGACTGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHLWSAI*VRTEVA Trigger: AGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAG...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGIPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCTGATCAGCCACAATaGCACTGTCATTACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTSDQPQ*HCHYVL Trigger: CAGCACGTAATGACAGTGTCATTGTGGCTGATCAGA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTLSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTAGGATGGTGCCTGGGTaGTTACAGTACTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALRMVPG*LQYLRL Trigger: CAACCTCAAGTACTGTAATCACCCAGGCACCATCCT...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWLHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGCATCTGGGTGAGGACTaGAGTGGCTACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWHLGED*SGYSFC Trigger: GCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATG...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACGGTCCGCCATCTGGGTaGGGACTGAAGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNGPPSG*GLKWLQ Trigger: CTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACC...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATGGGAGGGAGGAGCCATaGCAATCTGTGAAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHGREEP*QSVKVQ Trigger: CTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCC...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGGGGAGGGAGGAGCCATaGCAATCTGTGAAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWGREEP*QSVKVQ Trigger: CTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCC...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR GCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR GCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CCA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CWIASVCGLLGTERSSELWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGGTACAGGAACAATTaGCCTGTTAGAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTWYRNN*PVRGWC Trigger: GCACCATCCTCTAACAGGCCAATTGTTCCTGTACCA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WGGCSPELSRAFHTALETFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCCATTTCTCAGCAGGGTaGCTTCGCTCTGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGIHFSAG*LRSAAG Trigger: GCCAGCTGCAGAGCGAAGTCACCCTGCTGAGAAATG...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGCATTTCTCAGCAGGGTaGCTTCGCTCTGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLHFSAG*LRSAAG Trigger: GCCAGCTGCAGAGCGAAGTCACCCTGCTGAGAAATG...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTCATCTGGGTGAGGACTaGAGTGGCTACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFHLGED*SGYSFC Trigger: GCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATG...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATGGTCCGCCATCTGGGTaGGGACTGAAGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYGPPSG*GLKWLQ Trigger: CTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACC...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGTTGGCGTTGGAGTCTaGTCTGGCCACACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGVGVGV*SGHTQG Trigger: CCCCTGGGTGTGGCCAGATCAGACTCCAACGCCAAC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAAGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACTGTCATTACGTGCTaGACCAAATTTCAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWGGCSPELSRAFHTALETVITC*TKFQCH Trigger: ATGACACTGAAATTTGGTCCAGCACGTAATGACAGT...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTTGGTACAGGAACAATTaGCCTGTTAGAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLLYVDCLAQKGLLNCWYRNN*PVRGWC Trigger: GCACCATCCTCTAACAGGCCAATTGTTCCTGTACCA...ACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFRAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGCAGTATGATAGCCAGACTTCTTCTGCATGGCAGTTACAGGGCAATCTTAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQQYDSQTSSAWQLQGNLRAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTGGCTATCATACTGCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGTGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLCSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGICSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATCTCTGGTCCGCCATCTaGGTGAGGACTGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDLWSAI*VRTEVA Trigger: AGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAG...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCCTCTGGTCCGCCATCTaGGTGAGGACTGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGLWSAI*VRTEVA Trigger: AGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAG...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACCCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAGGCACCATGGTGACTaGCCGAACAAGCTTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGRHHGD*PNKLFI Trigger: GATGAAAAGCTTGTTCGGCCAGTCACCATGGTGCCT...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | GGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATTCTGATCAGCCACAATaGCACTGTCATTACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYVDCLAQKGLLNCHSDQPQ*HCHYVL Trigger: CAGCACGTAATGACAGTGTCATTGTGGCTGATCAGA...ATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTGACTTGCCAACTCATTaGACAAACCCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLLYVDCLAQKGLLNCDLPTH*TNPLLH Trigger: GTGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTC...ACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAGCAGTATGATAGCCAGACTTCTTCTGCATGGCAGTTACAGGGCAATCTTTGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YQQYDSQTSSAWQLQGNLWARLF*LSPNQS Trigger: GGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCA...AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTGGCTATCATACTGCTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAACATTTCTCAGCAGGGTaGCTTCGCTCTGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQHFSAG*LRSAAG Trigger: GCCAGCTGCAGAGCGAAGTCACCCTGCTGAGAAATG...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGLHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCGGGAGGGAGGAGCCATaGCAATCTGTGAAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGGREEP*QSVKVQ Trigger: CTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCC...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCGGGAGGGAGGAGCCATaGCAATCTGTGAAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGIGREEP*QSVKVQ Trigger: CTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCC...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATGGGAGGGAGGAGCCATaGCAATCTGTGAAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDGREEP*QSVKVQ Trigger: CTGCACTTTCACAGATTGTCATGGCTCCTCCCTCCC...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGTTGGCGTTGGAGTCTaGTCTGGCCACACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSVGVGV*SGHTQG Trigger: CCCCTGGGTGTGGCCAGATCAGACTCCAACGCCAAC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCGAGGTGGCTGGCTGCTaGAAGGACTGTGGGCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISEVAGC*KDCGRD Trigger: GTCTCGCCCACAGTCCTTGCAGCAGCCAGCCACCTC...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAAAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAAAGTGCAGGCTCCGTaGTCTGGTCCGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGKVQAP*SGPPSG Trigger: CCCAGATGGCGGACCAGAGCACGGAGCCTGCACTTT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | GGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYVDCLAQKGLLNCHKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...ATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGIDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGIRAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYVDCLAQKGLLNCHITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...ATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGTTATGGACAGCCAAATaGTCCTCGTTGGTAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGLWTAK*SSLVKR Trigger: GCGTTTTACCAACGAGGATCATTTGGCTGTCCATAA...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATTGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGIWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCTGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLAQKGLLNCHLYQQYDSWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...GCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATTGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDWARLF*LSPNQS Trigger: GGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCA...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCTGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGWARLF*LSPNQS Trigger: GGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCA...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGTGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLWARLF*LSPNQS Trigger: GGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCA...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCCATTTCTCAGCAGGGTaGCTTCGCTCTGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACHFSAG*LRSAAG Trigger: GCCAGCTGCAGAGCGAAGTCACCCTGCTGAGAAATG...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATCATCTGGGTGAGGACTaGAGTGGCTACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYHLGED*SGYSFC Trigger: GCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATG...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR GCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTGACACTGTCATTACGTaGTGGACCAAATTTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALDTVIT*WTKFQC Trigger: ACACTGAAATTTGGTCCAGCACGTAATGACAGTGTC...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR GCA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RWGGCSPELSRAFHTALEIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR GCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTCCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCACCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGTGGTACAGGAACAATTaGCCTGTTAGAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWWYRNN*PVRGWC Trigger: GCACCATCCTCTAACAGGCCAATTGTTCCTGTACCA...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAAAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAAAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCACTCTGGTCCGCCATCTaGGTGAGGACTGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSALWSAI*VRTEVA Trigger: AGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAG...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTACCTGAGGGCTGTGCCTaGGAGGGAGGAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLPEGCA*EGGAMT Trigger: TGTCATGGCTCCTCCCTCCCAGGCACAGCCCTCAGG...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTGAATCTTGTTGGCGTTaGAGTCTGATCTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFESCWR*SLIWPH Trigger: GTGTGGCCAGATCAGACTCCAACGCCAACAAGATTC...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| 3UTR CAA 72 bp | CAGAGCTGTGCTGGATCGCTTCTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTGAACTGTCATCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSCAGSLLYVDC*AQKGLLNCHLY Trigger: ATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCACAGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATGTTGGCGTTGGAGTCTaGTCAGCCACAATGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYVGVGV*SATMTL Trigger: CAGTGTCATTGTGGCTGATCAGACTCCAACGCCAAC...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTCTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGTAGTCGACTCGGGGTaGGGTAAAGGGCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLVVDSG*GKGLSW Trigger: CCAGGACAGCCCTTTACCTCACCCCGAGTCGACTAC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTTTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFLSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGAGGATGGTGCCTGGGTaGTTACAGTACTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLRMVPG*LQYLRL Trigger: CAACCTCAAGTACTGTAATCACCCAGGCACCATCCT...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCAGGATGGTGCCTGGGTaGTTACAGTACTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLAQKGLLNCHLYQQYDSRMVPG*LQYLRL Trigger: CAACCTCAAGTACTGTAATCACCCAGGCACCATCCT...GCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: CWIASVCGLLGTERSSELIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAATGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQWARLF*LSPNQS Trigger: GGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCA...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYWARLF*LSPNQS Trigger: GGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCA...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPPWKVIPRHMTSHIYALFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCATTTCTCAGCAGGGTaGCTTCGCTCTGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIHFSAG*LRSAAG Trigger: GCCAGCTGCAGAGCGAAGTCACCCTGCTGAGAAATG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACLHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNLHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCACTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSALHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTCATCTGGGTGAGGACTaGAGTGGCTACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGHLGED*SGYSFC Trigger: GCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATG...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTCATCTGGGTGAGGACTaGAGTGGCTACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFHLGED*SGYSFC Trigger: GCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATG...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGGTCCGCCATCTGGGTaGGGACTGAAGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLGPPSG*GLKWLQ Trigger: CTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCACCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTCCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATCCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR GCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGCTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGGCCACTTCATTTCTCAGCAGGGTGACTTCGCTCTATTTTGTGGATAATTTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWATSFLSRVTSLYFVDNLEDGA*VITVLE Trigger: CTCAAGTACTGTAATCACCCAGGCACCATCCTCTAA...ATTATCCACAAAATAGAGCGAAGTCACCCTGCTGAGAAATGAAGTGGCCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGTGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR CCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSARAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAAAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQRAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQICSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCTGTAGTGGAGGTGGCTaGCTGCTGCAAGGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISCSGGG*LLQGLW Trigger: CCACAGTCCTTGCAGCAGCCAGCCACCTCCACTACA...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCCTGACAGAGCTGTGCTaGATCGCTTCTGTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGILTELC*IASVCG Trigger: TCCACATACAGAAGCGATCCAGCACAGCTCTGTCAG...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCCTCTGGTCCGCCATCTaGGTGAGGACTGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISLWSAI*VRTEVA Trigger: AGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAG...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAATCAGCAGCTGCAGCTaGCCATTTAGTGAACTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSISSCS*PFSELK Trigger: CTTGAGTTCACTAAATGGCCAGCTGCAGCTGCTGAT...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGTTGGCGTTGGAGTCTaGTCAGCCACAATGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGVGVGV*SATMTL Trigger: CAGTGTCATTGTGGCTGATCAGACTCCAACGCCAAC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAGTTGGCGTTGGAGTCTaGTCAGCCACAATGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAVGVGV*SATMTL Trigger: CAGTGTCATTGTGGCTGATCAGACTCCAACGCCAAC...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAGACTTGCCAACTCATTaGACAAACCCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSDLPTH*TNPLLH Trigger: GTGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTC...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACTGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATTTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDLSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CWIASVCGLLGTERSSELEGTAC*IITLES Trigger: TGACTCAAGTGTAATTATTCAACAAGCAGTACCTTC...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMEALTNLIHLQQKACMGFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCTCCATTGGATGTGCTaGCAGAGCTGTGCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQILHWMC*QSCAGS Trigger: CGATCCAGCACAGCTCTGTCAGCACATCCAATGGAG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR GCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACCCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGACTGGCCGAACAAGTaGGACTGCAGCTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSDWPNK*DCSWNM Trigger: CATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLRHHGD*PNKWDC Trigger: GCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCT...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATTAGAATCCTTCAGTTTCCAAAGCTGTCAATCTGGCTCCTTTCACATGTGCTAAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRILQFPKLSIWLLSHVLRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...TAGCACATGTGAAAGGAGCCAGATTGACAGCTTTGGAAACTGAAGGATTCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR CCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATCTGACAGAGCTGTGCTaGATCGCTTCTGTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYLTELC*IASVCG Trigger: TCCACATACAGAAGCGATCCAGCACAGCTCTGTCAG...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCTCTGGTCCGCCATCTaGGTGAGGACTGAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHLWSAI*VRTEVA Trigger: AGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATGAATCTTGTTGGCGTTaGAGTCTGATCTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYESCWR*SLIWPH Trigger: GTGTGGCCAGATCAGACTCCAACGCCAACAAGATTC...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCTTATGGACAGCCAAATaGTCCTCGTTGGTAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGLWTAK*SSLVKR Trigger: GCGTTTTACCAACGAGGATCATTTGGCTGTCCATAA...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | GCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCCAGACTTTATGGACAGCCAAATaGTCCTCGTTGGTAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: AQKGLLNCHLYQQYDSQTLWTAK*SSLVKR Trigger: GCGTTTTACCAACGAGGATCATTTGGCTGTCCATAA...AGTCTGGCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR TCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAGGATGGTGCCTGGGTaGTTACAGTACTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGRMVPG*LQYLRL Trigger: CAACCTCAAGTACTGTAATCACCCAGGCACCATCCT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQACTVMASETAVIYCQHIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATTTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGTGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQATSWNVSYPSLHSNGITGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AAGTACAAGTTAGCTCGCAAGTACAAGTACGACAATGGGGGAAACAGTCTTAACACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYKLARKYKYDNGGNSLNTGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...GTTAAGACTGTTTCCCCCATTGTCGTACTTGTACTTGCGAGCTAACTTGTACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLTGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCATCTGGGTGAGGACTaGAGTGGCTACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHHLGED*SGYSFC Trigger: GCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAAGCCATGACAATCTGTaGAAGTGCAGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSSHDNL*KCRLRA Trigger: AGCACGGAGCCTGCACTTTCACAGATTGTCATGGCT...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTCACACCCAGGGGCAGTaGATAGAAAGGGTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFHTQGQ*IERVCH Trigger: ATGACAAACCCTTTCTATGCACTGCCCCTGGGTGTG...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACACACCCAGGGGCAGTaGATAGAAAGGGTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQHTQGQ*IERVCH Trigger: ATGACAAACCCTTTCTATGCACTGCCCCTGGGTGTG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCACACACCCAGGGGCAGTaGATAGAAAGGGTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAHTQGQ*IERVCH Trigger: ATGACAAACCCTTTCTATGCACTGCCCCTGGGTGTG...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLLYVDCLAQKGLLNCIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...ACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTCCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATCTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATGAATCTTGTTGGCGTTaGAGTCTGATCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDESCWR*SLISHN Trigger: ATTGTGGCTGATCAGACTCCAACGCCAACAAGATTC...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCTTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGLEDGA*VITVLE Trigger: CTCAAGTACTGTAATCACCCAGGCACCATCCTCTAA...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACTGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAATGGTACAGGAACAATTaGCCTGTTAGAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQWYRNN*PVRGWC Trigger: GCACCATCCTCTAACAGGCCAATTGTTCCTGTACCA...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATAGGGCCTGGGATTCCTaGAACACTAGGCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHRAWDS*NTRHHG Trigger: ACCATGGTGCCTAGTGTTCCAGGAATCCCAGGCCCT...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGGAGAGGAAGGGCCTaGGATTCCTGGAACACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLRRGRA*DSWNTR Trigger: CCTAGTGTTCCAGGAATCCCAGGCCCTTCCTCTCCT...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATATCACCATTGGTAACTaGAGGGTGTTGCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYITIGN*RVLLGQ Trigger: TTGACCCAGCAACACCCTCCAGTTACCAATGGTGAT...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DCLAQKGLLNCHLYQQYDTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...ATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR CCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSARSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGCAGACTTCTTCTGCATaGCAGTTACAGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLQTSSA*QLQGNL Trigger: AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTG...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTCTGACAGAGCTGTGCTaGATCGCTTCTGTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGLTELC*IASVCG Trigger: TCCACATACAGAAGCGATCCAGCACAGCTCTGTCAG...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACTGACAGAGCTGTGCTaGATCGCTTCTGTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQLTELC*IASVCG Trigger: TCCACATACAGAAGCGATCCAGCACAGCTCTGTCAG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGAATCTTGTTGGCGTTaGAGTCTGATCTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNESCWR*SLIWPH Trigger: GTGTGGCCAGATCAGACTCCAACGCCAACAAGATTC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATCTGATCAGCCACAATaGCACTGTCATTACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSASDQPQ*HCHYVL Trigger: CAGCACGTAATGACAGTGTCATTGTGGCTGATCAGA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGTTGGCGTTGGAGTCTaGTCAGCCACAATGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLVGVGV*SATMTL Trigger: CAGTGTCATTGTGGCTGATCAGACTCCAACGCCAAC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATGACTTGCCAACTCATTaGACAAACCCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYDLPTH*TNPLLH Trigger: GTGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTC...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATGGACGAACGATAGCTaGTGTGGGCTGTGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLWTNDS*CGLCSL Trigger: CAAACTGCACAGCCCACATCAGCTATCGTTCGTCCA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCTTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACLSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MITRLPSHLRVKGWAKKWEGTAC*IITLES Trigger: TGACTCAAGTGTAATTATTCAACAAGCAGTACCTTC...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCACACCCAGGGGCAGTaGATAGAAAGGGTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIHTQGQ*IERVCH Trigger: ATGACAAACCCTTTCTATGCACTGCCCCTGGGTGTG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTGTGGATAATTAGAATCCTTCAGTTTCCAAAGCTGTCAATCTGGCTCCTTCACACCCAGGGGCAGTaGATAGAAAGGGTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILWIIRILQFPKLSIWLLHTQGQ*IERVCH Trigger: ATGACAAACCCTTTCTATGCACTGCCCCTGGGTGTG...AAGGAGCCAGATTGACAGCTTTGGAAACTGAAGGATTCTAATTATCCACAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCACCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAACTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAACTGTCATTACGTGCTaGACCAAATTTCAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSTVITC*TKFQCH Trigger: ATGACACTGAAATTTGGTCCAGCACGTAATGACAGT...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR CCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAAGAATCTTGTTGGCGTTaGAGTCTGATCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQESCWR*SLISHN Trigger: ATTGTGGCTGATCAGACTCCAACGCCAACAAGATTC...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYLEDGA*VITVLE Trigger: CTCAAGTACTGTAATCACCCAGGCACCATCCTCTAA...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCTGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTTGGTACAGGAACAATTaGCCTGTTAGAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGWYRNN*PVRGWC Trigger: GCACCATCCTCTAACAGGCCAATTGTTCCTGTACCA...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCTGGTACAGGAACAATTaGCCTGTTAGAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACWYRNN*PVRGWC Trigger: GCACCATCCTCTAACAGGCCAATTGTTCCTGTACCA...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAAACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCAGGAGTTGTGTGAGCTaGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIRSCVS*RSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCT...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAACAGACTTCTTCTGCATaGCAGTTACAGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQQTSSA*QLQGNL Trigger: AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTG...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCACTGACAGAGCTGTGCTaGATCGCTTCTGTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSLTELC*IASVCG Trigger: TCCACATACAGAAGCGATCCAGCACAGCTCTGTCAG...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR CAA 72 bp | AAACACATTACAGGTATTTACAGAATGGAATCCTGCTaGAACGCCAGAAGTTGCTACTGGGTAGGACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: KHITGIYRMESC*NARSCYWVGLI Trigger: TATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAATACCTGTAATGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTTTATGGACAGCCAAATaGTCCTCGTTGGTAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGLWTAK*SSLVKR Trigger: GCGTTTTACCAACGAGGATCATTTGGCTGTCCATAA...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGACTTGCCAACTCATTaGACAAACCCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNDLPTH*TNPLLH Trigger: GTGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTGACTTGCCAACTCATTaGACAAACCCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGDLPTH*TNPLLH Trigger: GTGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTC...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGCTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCCTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLAQKGLLNCHLYQQYDSLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...GCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
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| CDS-3UTR TCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAAAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGGATGGTGCCTGGGTaGTTACAGTACTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLRMVPG*LQYLRL Trigger: CAACCTCAAGTACTGTAATCACCCAGGCACCATCCT...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAATTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEQATSWNVSYPSLHSNGFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLAQKGLLNCHLYQQYDSFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...GCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNTGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSATGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGAATCCTTCAGTTTCCAAAGCTGTCAATCTGGCTCCTTTCACATGTGCTAGACACTGTCATTACGTaGTGGACCAAATTTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRILQFPKLSIWLLSHVLDTVIT*WTKFQC Trigger: ACACTGAAATTTGGTCCAGCACGTAATGACAGTGTC...TAGCACATGTGAAAGGAGCCAGATTGACAGCTTTGGAAACTGAAGGATTCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR GCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTGTGGATAATTAGAATCCTTCAGTTTCCAAAGCTGTCAATCTGGCTCCTTCCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ILWIIRILQFPKLSIWLLPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...AAGGAGCCAGATTGACAGCTTTGGAAACTGAAGGATTCTAATTATCCACAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTACCGAACAAGTGGGACTaGAGCTGGAACATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLPNKWD*SWNMHI Trigger: AATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGG...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTCTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACCTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCCAGACTACTGTCATTACGTGCTaGACCAAATTTCAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQKGLLNCHLYQQYDSQTTVITC*TKFQCH Trigger: ATGACACTGAAATTTGGTCCAGCACGTAATGACAGT...AGTCTGGCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTGAATCTTGTTGGCGTTaGAGTCTGATCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFESCWR*SLISHN Trigger: ATTGTGGCTGATCAGACTCCAACGCCAACAAGATTC...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAGAATCTTGTTGGCGTTaGAGTCTGATCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAESCWR*SLISHN Trigger: ATTGTGGCTGATCAGACTCCAACGCCAACAAGATTC...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAATTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQLEDGA*VITVLE Trigger: CTCAAGTACTGTAATCACCCAGGCACCATCCTCTAA...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATGGCCTGTTAGAGGATaGTGCCTGGGTGATTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLWPVRG*CLGDYS Trigger: ACTGTAATCACCCAGGCACCATCCTCTAACAGGCCA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCAAGAGGAAATGGGCCTaGTACAGGAACAATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISKRKWA*YRNNWP Trigger: AGGCCAATTGTTCCTGTACCAGGCCCATTTCCTCTT...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTCAGACTTCTTCTGCATaGCAGTTACAGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFQTSSA*QLQGNL Trigger: AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTG...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTCAGACTTCTTCTGCATaGCAGTTACAGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGQTSSA*QLQGNL Trigger: AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTG...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGATCGCTTCTGTATGTaGACTGCTTGGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIDRFCM*TAWHRK Trigger: CTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCTGACAGAGCTGTGCTaGATCGCTTCTGTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHLTELC*IASVCG Trigger: TCCACATACAGAAGCGATCCAGCACAGCTCTGTCAG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATTCTGATCAGCCACAATaGCACTGTCATTACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHSDQPQ*HCHYVL Trigger: CAGCACGTAATGACAGTGTCATTGTGGCTGATCAGA...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATCTGATCAGCCACAATaGCACTGTCATTACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLSDQPQ*HCHYVL Trigger: CAGCACGTAATGACAGTGTCATTGTGGCTGATCAGA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGACTTGCCAACTCATTaGACAAACCCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIDLPTH*TNPLLH Trigger: GTGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCAAAGGGCTGTCCTGGTaGGTTGTTTCTACAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISKGLSW*VVSTTE Trigger: TTCTGTTGTAGAAACAACTCACCAGGACAGCCCTTT...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATTTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHLSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATTGAGTCAGAACTTGTaGGCAGCACATTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLLSQNL*AAHWEP Trigger: AGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRHMTSHIYALLLYNCKDEGTAC*IITLES Trigger: TGACTCAAGTGTAATTATTCAACAAGCAGTACCTTC...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLEGTAC*IITLES Trigger: TGACTCAAGTGTAATTATTCAACAAGCAGTACCTTC...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCATTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCACAGGGCAATCTTTATaGGCCAGAAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQITGQSL*ARRSCF Trigger: GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGT...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAGACACTGTCATTACGTaGTGGACCAAATTTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSADTVIT*WTKFQC Trigger: ACACTGAAATTTGGTCCAGCACGTAATGACAGTGTC...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTGACACTGTCATTACGTaGTGGACCAAATTTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFDTVIT*WTKFQC Trigger: ACACTGAAATTTGGTCCAGCACGTAATGACAGTGTC...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GILLERQKLLLGRTHNYFIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: EALTNLIHLQQKACMGNSIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGGGCTGTGCAGTTTGTaGCAATGGTACTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLGLCSL*QWYFLF Trigger: GAAAAGGAAGTACCATTGGCACAAACTGCACAGCCC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCCTGTTAGAGGATGGTaGCTGGGTGATTACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHPVRGW*LGDYST Trigger: AGTACTGTAATCACCCAGGCACCATCCTCTAACAGG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGAATCTTGTTGGCGTTaGAGTCTGATCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIESCWR*SLISHN Trigger: ATTGTGGCTGATCAGACTCCAACGCCAACAAGATTC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCATTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSLEDGA*VITVLE Trigger: CTCAAGTACTGTAATCACCCAGGCACCATCCTCTAA...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCTTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISLEDGA*VITVLE Trigger: CTCAAGTACTGTAATCACCCAGGCACCATCCTCTAA...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCCAGACTTCTTCTGCATaGCAGTTACAGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISQTSSA*QLQGNL Trigger: AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTG...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCCAGACTTCTTCTGCATaGCAGTTACAGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: STLQLQGSVTKELKLAQIQTSSA*QLQGNL Trigger: AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTG...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| 3UTR CAA 72 bp | CTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTaGATTAGTCTAAGAAGTGCACAAAGCACTAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNIAGRWMT*ISLRSAQSTNR Trigger: ACGGTTAGTGCTTTGTGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATTATGGACAGCCAAATaGTCCTCGTTGGTAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLLWTAK*SSLVKR Trigger: GCGTTTTACCAACGAGGATCATTTGGCTGTCCATAA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCCTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACCTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: MHFYFTIARICYQRTEACIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATTTTTGTCGGCATCTTaGAGCTGCTGCTCTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLFLSAS*SCCSIS Trigger: CGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNIAGRWMTLISLRSAFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTTTCTTCTCTAAGGACTaGACCCACACTTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LERQKLLLGRTHNYFTKFFFSKD*THTFLF Trigger: AAAAAGGAAAGTGTGGGTTCAGTCCTTAGAGAAGAA...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR TCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCACACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSHRKVF*TVIFIS Trigger: GCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTG...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATCTTCTGTATGTGGACTaGTTGGCACAGAAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHLLYVD*LAQKGL Trigger: AAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAG...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTACTGTCATTACGTGCTaGACCAAATTTCAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFGINDNKTTITSQGTVITC*TKFQCH Trigger: ATGACACTGAAATTTGGTCCAGCACGTAATGACAGT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATACCAATCCACTGCCATaGCCTTTTACAGTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHTNPLP*PFTVSP Trigger: TGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| 3UTR CAA 72 bp | TATTTACAGAATGGAATCCTGCTTGAACGCCAGAAGTaGCTACTGGGTAGGACTCATAACTATTTTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLQNGILLERQK*LLGRTHNYFTK Trigger: CTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCCATTCTGTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR TCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCCTTCGGAAGCCTTCTTaGATTCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISLRKPS*IHFQMD Trigger: GTCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAG...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPETKNIFSLIINCCYTNEGTAC*IITLES Trigger: TGACTCAAGTGTAATTATTCAACAAGCAGTACCTTC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAAATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KLQSSIASITLKASLNIQIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: MLVIQACTVMASETAVIYIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCACTGTCATTACGTGCTaGACCAAATTTCAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISTVITC*TKFQCH Trigger: ATGACACTGAAATTTGGTCCAGCACGTAATGACAGT...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR TCA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHNFRLFWQPHHTSLCISEGTAC*IITLES Trigger: TGACTCAAGTGTAATTATTCAACAAGCAGTACCTTC...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNLKNIAGRWMTLISLIRTCN*CRNSNG Trigger: CCCGTTGCTATTCCTGCATCAATTACAAGTTCTAAT...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR GCA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAATTTTCAAATGGACTTaGCAACTCATTGAACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: NIRTQNARYRSSVTSWNSIFKWT*QLIEQT Trigger: GGTTTGTTCAATGAGTTGGCAAGTCCATTTGAAAAT...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTCCGTGCTCTGGTCCGCCATCTGGGTGAGGACTGAAGTGGCTACAGCTTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSVLWSAIWVRTEVATAFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...AGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGCACGGAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAGGAATCTTGTTGGCGTaGGAGTCTGATCTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RWGGCSPELSRAFHTALEGILLA*ESDLAT Trigger: TGTGGCCAGATCAGACTCCAACGCCAACAAGATTCC...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGTGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WGGCSPELSRAFHTALETCGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSTVEGHSPSHDFSHLCTFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...AGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWGGCSPELSRAFHTALETATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGGCSPELSRAFHTALETTATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAACTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RWGGCSPELSRAFHTALELYVDC*AQKGLL Trigger: CAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAG...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAACTTGTGAGCAGCACATaGGGAACCTGTAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWGGCSPELSRAFHTALELVSST*GTCNDA Trigger: AGCATCATTACAGGTTCCCAATGTGCTGCTCACAAG...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGCTTGTGAGCAGCACATaGGGAACCTGTAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: WGGCSPELSRAFHTALETLVSST*GTCNDA Trigger: AGCATCATTACAGGTTCCCAATGTGCTGCTCACAAG...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | GACAGAGCTGTGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DRAVLDRFCMWTAWHRKVTATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...GACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCACAGCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS GCA 90 bp | GGCACCATGGTGACTGGCCGAACAAGTGGGACTGCAGCTGGAACATaGACATTAGAACTTGTAATTGATGCAGGAATAGCAACGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GTMVTGRTSGTAAGT*TLELVIDAGIATGM Trigger: CATGCCCGTTGCTATTCCTGCATCAATTACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HMEALTNLIHLQQKACMGFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...CCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTCCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGGCSPELSRAFHTALETFLGIL*ALESDQ Trigger: CTGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTTGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGSLLYVDCLAQKGLLNCCGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...ACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | GACAGAGCTGTGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCGAAGGCTCCTCAATTTaGCTTCTTATGATGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DRAVLDRFCMWTAWHRKVEGSSI*LLMMGV Trigger: AACACCCATCATAAGAAGCAAAATTGAGGAGCCTTC...GACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCACAGCTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGCTTGTGAGCAGCACATaGGGAACCTGTAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: CWIASVCGLLGTERSSELLVSST*GTCNDA Trigger: AGCATCATTACAGGTTCCCAATGTGCTGCTCACAAG...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGGGTAACTGGAGGGTGTaGCTGGGTCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWGNWRV*LGQSSF Trigger: AAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACC...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS TCA 90 bp | CTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGCAGCTGCAGCTGGCCATTTAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LDRFCMWTAWHRKVF*TVIFISSCSWPFSE Trigger: TTCACTAAATGGCCAGCTGCAGCTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATGGAATCTTGTTGGCGTaGGAGTCTGATCAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: IQACTVMASETAVIYCQHGILLA*ESDQPQ Trigger: TTGTGGCTGATCAGACTCCAACGCCAACAAGATTCC...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGGGAATCTTGTTGGCGTaGGAGTCTGATCAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWGILLA*ESDQPQ Trigger: TTGTGGCTGATCAGACTCCAACGCCAACAAGATTCC...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CWIASVCGLLGTERSSELGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAAACGTCTTCGGAAGCCTTCTaGAATTCATTTTCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: WGGCSPELSRAFHTALETSSEAF*NSFSNG Trigger: TCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAGA...CGTTTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATTGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQACTVMASETAVIYCQHCGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGGTGGGTGTTCCCCTGAACTCTCAAGGGCATTCCATACGGCTTTGGAACTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RWGGCSPELSRAFHTALELLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...TTCCAAAGCCGTATGGAATGCCCTTGAGAGTTCAGGGGAACACCCACCCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TATCAGCAGTATGATAGCCAGACTTCTTCTGCATGGCAGTTACAGGGCAATCTTGGTAACTGGAGGGTGTaGCTGGGTCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YQQYDSQTSSAWQLQGNLGNWRV*LGQSSF Trigger: AAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACC...AAGATTGCCCTGTAACTGCCATGCAGAAGAAGTCTGGCTATCATACTGCTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EQATSWNVSYPSLHSNGIFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWTATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGGTTGAACTGACTCCATaGGATGTGCTGACAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWVELTP*DVLTEL Trigger: CAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAAC...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCAGGAATCTTGTTGGCGTaGGAGTCTGATCTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EALTNLIHLQQKACMGNSGILLA*ESDLAT Trigger: TGTGGCCAGATCAGACTCCAACGCCAACAAGATTCC...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGSLLYVDCLAQKGLLNCLQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...ACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATGGTAACTGGAGGGTGTaGCTGGGTCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PRHMTSHIYALLLYNCKDGNWRV*LGQSSF Trigger: AAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACC...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAATTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KLQSSIASITLKASLNIQFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCACCGTGGAAGGTCATTCCCCGTCACATGACTTCTCACATCTATGCACTTTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPPWKVIPRHMTSHIYALFLGIL*ALESDL Trigger: CAGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...AAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACA 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTGGCACAGAAAGGTCTTCTGAACTGTCATCTTTATCAGCAGTATGATAGCGGAATCTTGTTGGCGTaGGAGTCTGATCAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: CLAQKGLLNCHLYQQYDSGILLA*ESDQPQ Trigger: TTGTGGCTGATCAGACTCCAACGCCAACAAGATTCC...GCTATCATACTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | GGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCATTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLLYVDCLAQKGLLNCHFLGIL*ALESDQ Trigger: CTGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...ATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTGCCAGCATGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IQACTVMASETAVIYCQHGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...ATGCTGGCAATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATTGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRHMTSHIYALLLYNCKDCGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTCTTGTGAGCAGCACATaGGGAACCTGTAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GILLERQKLLLGRTHNYFLVSST*GTCNDA Trigger: AGCATCATTACAGGTTCCCAATGTGCTGCTCACAAG...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNFGINDNKTTITSQGFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EQATSWNVSYPSLHSNGITATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGCTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLLYVDC*AQKGLL Trigger: CAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAG...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCCTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEQATSWNVSYPSLHSNGLYVDC*AQKGLL Trigger: CAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAG...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCTAGTGTCTTACAACTTTGTCCATCTTACACAGACAATAGGGACTCTGGTTGAACTGACTCCATaGGATGTGCTGACAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLVSYNFVHLTQTIGTLVELTP*DVLTEL Trigger: CAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAAC...CAGAGTCCCTATTGTCTGTGTAAGATGGACAAAGTTGTAAGACACTAGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCGTTGAACTGACTCCATaGGATGTGCTGACAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EQATSWNVSYPSLHSNGIVELTP*DVLTEL Trigger: CAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAAC...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS TCA 90 bp | GCCTGGGTGATTACAGTACTTGAGGTTGGTGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCAGAACTTGTGAGCAGCACATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AWVITVLEVGEGTAC*IITLESELVSSTLG Trigger: TCCCAATGTGCTGCTCACAAGTTCTGACTCAAGTGTAATTATTCAACAAGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000128531.8 ENSMUST00000154456.8 ENSMUST00000173010.8 |
||
| CDS TCA 90 bp | AACAAGTGGGACTGCAGCTGGAACATGCACATTAGAACTTGTAATTaGTGCAGGAATAGCAACGGGCATGGTTTGTCCATTAGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NKWDCSWNMHIRTCN*CRNSNGHGLSIRKM Trigger: CATCTTCCTAATGGACAAACCATGCCCGTTGCTATTCCTGCATCAATTACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGTCTTCGGAAGCCTTCTaGAATTCATTTTCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: CWIASVCGLLGTERSSELSSEAF*NSFSNG Trigger: TCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAGA...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWLQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATCGCTTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTGAACTGCTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CWIASVCGLLGTERSSELLLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...CAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAAGCGATCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173010.8 |
||
| CDS-3UTR CAA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCGGTAACTGGAGGGTGTaGCTGGGTCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MHFYFTIARICYQRTEACGNWRV*LGQSSF Trigger: AAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACC...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STLQLQGSVTKELKLAQIFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCATTTGGGTCTGAGGAGTaGTGTGAGCTGGAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NIRTQNARYRSSVTSWNSFGSEE*CELEKP Trigger: CGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAA...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MLVIQACTVMASETAVIYTATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAACTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLQSSIASITLKASLNIQLYVDC*AQKGLL Trigger: CAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAG...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATGTTGAACTGACTCCATaGGATGTGCTGACAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MLVIQACTVMASETAVIYVELTP*DVLTEL Trigger: CAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAAC...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | ATGATAACAAGACTACCATCACATCTCAGGGTGAAGGGGTGGGCAAAGAAATGGTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: MITRLPSHLRVKGWAKKWFLGIL*ALESDL Trigger: CAGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...CCATTTCTTTGCCCACCCCTTCACCCTGAGATGTGATGGTAGTCTTGTTATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CAA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRHMTSHIYALLLYNCKDGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLKNIAGRWMTLISLRSACGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGGTAACTGGAGGGTGTaGCTGGGTCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NIRTQNARYRSSVTSWNSGNWRV*LGQSSF Trigger: AAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNFGINDNKTTITSQGTATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | ACTCTGCAGAACTTTGGTATAAATGATAACAAGACTACCATCACATCTCAGGGTCTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNFGINDNKTTITSQGLYVDC*AQKGLL Trigger: CAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAG...ACCCTGAGATGTGATGGTAGTCTTGTTATCATTTATACCAAAGTTCTGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCAGTTGAACTGACTCCATaGGATGTGCTGACAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLKNIAGRWMTLISLRSAVELTP*DVLTEL Trigger: CAGCTCTGTCAGCACATCCAATGGAGTCAGTTCAAC...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGGAATCTTGTTGGCGTaGGAGTCTGATCAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: NIRTQNARYRSSVTSWNSGILLA*ESDQPQ Trigger: TTGTGGCTGATCAGACTCCAACGCCAACAAGATTCC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGGAATCTTGTTGGCGTaGGAGTCTGATCAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: STLQLQGSVTKELKLAQIGILLA*ESDQPQ Trigger: TTGTGGCTGATCAGACTCCAACGCCAACAAGATTCC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | GAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: EQATSWNVSYPSLHSNGIFLGIL*ALESDQ Trigger: CTGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...GATGCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | AAACTGCAGTCATCTATTGCCAGCATCACACTGAAGGCATCGTTAAACATTCAAGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLQSSIASITLKASLNIQGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...TTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCAATAGATGACTGCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACCTTGTGAGCAGCACATaGGGAACCTGTAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPETKNIFSLIINCCYTNLVSST*GTCNDA Trigger: AGCATCATTACAGGTTCCCAATGTGCTGCTCACAAG...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCACTTGTGAGCAGCACATaGGGAACCTGTAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLKNIAGRWMTLISLRSALVSST*GTCNDA Trigger: AGCATCATTACAGGTTCCCAATGTGCTGCTCACAAG...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRHMTSHIYALLLYNCKDLQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CAA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGGTAACTGGAGGGTGTaGCTGGGTCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLNLKNIAGRWMTLISLGNWRV*LGQSSF Trigger: AAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHNFRLFWQPHHTSLCISTATCI*GLRSCV Trigger: CACACAACTCCTCAGACCCAAAATACAAGTGGCCGT...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCACTGTATGTGGACTGCTaGGCACAGAAAGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIRTQNARYRSSVTSWNSLYVDC*AQKGLL Trigger: CAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAG...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGGAATCTTGTTGGCGTaGGAGTCTGATCTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CLLNLKNIAGRWMTLISLGILLA*ESDLAT Trigger: TGTGGCCAGATCAGACTCCAACGCCAACAAGATTCC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CAA 90 bp | TCAGAACAAGCTACATCATGGAATGTTAGTTATCCAAGCCTGCACAGTAATGGCTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEQATSWNVSYPSLHSNGFLGIL*ALESDL Trigger: CAGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...GCCATTACTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090802.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LERQKLLLGRTHNYFTKFGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCATCTTCGGAAGCCTTCTaGAATTCATTTTCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: EALTNLIHLQQKACMGNSSSEAF*NSFSNG Trigger: TCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAGA...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | GGAATCCTGCTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTTCTTCGGAAGCCTTCTaGAATTCATTTTCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GILLERQKLLLGRTHNYFSSEAF*NSFSNG Trigger: TCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAGA...AAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAGCAGGATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLNLKNIAGRWMTLISLCGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
||
| CDS-3UTR CAA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATTGTGGGCTGTGCAGTTaGTGCCAATGGTACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHCGLCS*CQWYFL Trigger: AAGGAAGTACCATTGGCACAAACTGCACAGCCCACA...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCTGACCAACCTTATCCATCTACAACAAAAAGCTTGCATGGGGAATTCACTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EALTNLIHLQQKACMGNSLLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...TGAATTCCCCATGCAAGCTTTTTGTTGTAGATGGATAAGGTTGGTCAGAGCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAAGAAGGCTCCTCAATTTaGCTTCTTATGATGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQEGSSI*LLMMGV Trigger: AACACCCATCATAAGAAGCAAAATTGAGGAGCCTTC...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCGAAGGCTCCTCAATTTaGCTTCTTATGATGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: MHFYFTIARICYQRTEACEGSSI*LLMMGV Trigger: AACACCCATCATAAGAAGCAAAATTGAGGAGCCTTC...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACGAAGGCTCCTCAATTTaGCTTCTTATGATGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LPETKNIFSLIINCCYTNEGSSI*LLMMGV Trigger: AACACCCATCATAAGAAGCAAAATTGAGGAGCCTTC...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | CTTGAACGCCAGAAGTTGCTACTGGGTAGGACTCATAACTATTTTACAAAGTTTTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LERQKLLLGRTHNYFTKFLQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...AAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCGTTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CAA 90 bp | CTTCCAGAGACTAAAAACATATTCAGTCTGATCATCAACTGCTGCTATACCAACTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LPETKNIFSLIINCCYTNLQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...GTTGGTATAGCAGCAGTTGATGATCAGACTGAATATGTTTTTAGTCTCTGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | CCCCGTCACATGACTTCTCACATCTATGCACTTCTACTTTACAATTGCAAGGATCTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: PRHMTSHIYALLLYNCKDLLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...ATCCTTGCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AGTCATAATTTTAGGCTTTTCTGGCAACCACATCACACTTCTTTATGCATAAGCTTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCAG | + |
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Preference number: 5 (lower is better) Translates to: SHNFRLFWQPHHTSLCISFLGIL*ALESDQ Trigger: CTGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...GCTTATGCATAAAGAAGTGTGATGTGGTTGCCAGAAAAGCCTAAAATTATGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAGGACTTGCCAACTCATaGAACAAACCCACTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: CLLNLKNIAGRWMTLISLGLANS*NKPTSS Trigger: TGAAGAAGTGGGTTTGTTCAATGAGTTGGCAAGTCC...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATTCTTCGGAAGCCTTCTaGAATTCATTTTCAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: MLVIQACTVMASETAVIYSSEAF*NSFSNG Trigger: TCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAGA...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCGAAGGCTCCTCAATTTaGCTTCTTATGATGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: STLQLQGSVTKELKLAQIEGSSI*LLMMGV Trigger: AACACCCATCATAAGAAGCAAAATTGAGGAGCCTTC...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | AATATAAGGACTCAAAATGCTAGGTACAGAAGTAGTGTGACATCCTGGAATTCAGAAGGCTCCTCAATTTaGCTTCTTATGATGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: NIRTQNARYRSSVTSWNSEGSSI*LLMMGV Trigger: AACACCCATCATAAGAAGCAAAATTGAGGAGCCTTC...TGAATTCCAGGATGTCACACTACTTCTGTACCTAGCATTTTGAGTCCTTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 |
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| CDS-3UTR CAA 90 bp | TCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCACAAATCTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: STLQLQGSVTKELKLAQILQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...GATTTGTGCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CAA 90 bp | ATGTTAGTTATCCAAGCCTGCACAGTAATGGCATCTGAAACTGCAGTCATCTATCTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: MLVIQACTVMASETAVIYLLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...ATAGATGACTGCAGTTTCAGATGCCATTACTGTGCAGGCTTGGATAACTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | TGTTTACTTAATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTATTTTTAGGAATCTTGTaGGCGTTGGAGTCTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLNLKNIAGRWMTLISLFLGIL*ALESDQ Trigger: CTGATCAGACTCCAACGCCAACAAGATTCCTAAAAA...TAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATTAAGTAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000055833.12 ENSMUST00000100009.11 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCATCTTCGGAAGCCTTCTaGAATTCATTTTCAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: NLKNIAGRWMTLISLRSASSEAF*NSFSNG Trigger: TCCATTTGAAAATGAATTCAAGAAGGCTTCCGAAGA...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 |
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| CDS-3UTR CAA 90 bp | GAAACAGTCTTAACGTTTCTAAGTCATAATTTTAGGCTTTTCTGGCAACCACATTTACAGTACTTGAGGTaGGTGAAGGTACTGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: ETVLTFLSHNFRLFWQPHLQYLR*VKVLLV Trigger: AACAAGCAGTACCTTCACCAACCTCAAGTACTGTAA...ATGTGGTTGCCAGAAAAGCCTAAAATTATGACTTAGAAACGTTAAGACTGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 |
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| CDS-3UTR CAA 90 bp | ATGCACTTCTACTTTACAATTGCAAGGATCTGTTACCAAAGAACTGAAGCTTGCCTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: MHFYFTIARICYQRTEACLLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...GCAAGCTTCAGTTCTTTGGTAACAGATCCTTGCAATTGTAAAGTAGAAGTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AATCTTAAAAACATTGCAGGGCGATGGATGACCTTGATTAGTCTAAGAAGTGCACTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: NLKNIAGRWMTLISLRSALLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...TGCACTTCTTAGACTAATCAAGGTCATCCATCGCCCTGCAATGTTTTTAAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS-3UTR CAA 90 bp | AGTGGGAAGAGTGATTCAGTAACACCCCCATTTATTAAGATGCCACTAAATCAACTTTTAATCTCATTTTaGCTTCTGACTGGACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: SGKSDSVTPPFIKMPLNQLLISF*LLTGLV Trigger: AACCAGTCCAGTCAGAAGCAAAAATGAGATTAAAAG...TTGATTTAGTGGCATCTTAATAAATGGGGGTGTTACTGAATCACTCTTCCCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 |
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| CDS CCA 72 bp | GCCTGGGATTCCTGGAACACTAGGCACCATGGTGACTaGCCGAACAAGTGGGACTGCAGCTGGAACATGCAC | + |
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Preference number: 6 (lower is better) Translates to: AWDSWNTRHHGD*PNKWDCSWNMH Trigger: GTGCATGTTCCAGCTGCAGTCCCACTTGTTCGGCCAGTCACCATGGTGCCTAGTGTTCCAGGAATCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000173010.8 |
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| CDS TCA 72 bp | GGCTGGCTGCTGCAAGGACTGTGGGCGAGACTCTTCTaGCTGAGTCCTAACCAATCCACTGCCATGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GWLLQGLWARLF*LSPNQSTAMAF Trigger: AAAGGCCATGGCAGTGGATTGGTTAGGACTCAGTCAGAAGAGTCTCGCCCACAGTCCTTGCAGCAGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000136958.8 ENSMUST00000173010.8 |
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| CDS CCA 72 bp | GCCTGGGATTCCTGGAACACTAGGCACCATGGTGACTaGCCGAACAAGCTTTTCATCACTGGTAGTCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: AWDSWNTRHHGD*PNKLFITGSRL Trigger: GAGTCGACTACCAGTGATGAAAAGCTTGTTCGGCCAGTCACCATGGTGCCTAGTGTTCCAGGAATCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112016.9 ENSMUST00000136958.8 |
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| CDS CAA 72 bp | TTCATTAGCTGCTCTTCTTCGACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTGAGCTGGAGAAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: FISCSSSTATCI*GLRSCVSWRSR Trigger: CCGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAAATACAAGTGGCCGTCGAAGAAGAGCAGCTAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000173010.8 |
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| CDS CAA 72 bp | ACCAATCCACTGCCATGGCCTTTTACAGTATCACCATaGGTAACTGGAGGGTGTTGCTGGGTCAAAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TNPLPWPFTVSP*VTGGCCWVKAA Trigger: AGCTGCTTTGACCCAGCAACACCCTCCAGTTACCAATGGTGATACTGTAAAAGGCCATGGCAGTGGATTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000136958.8 ENSMUST00000173010.8 |
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| CDS CAA 90 bp | ATCAGGATCTTCATTAGCTGCTCTTCTTCGACGGCCACTTGTATTTaGGGTCTGAGGAGTTGTGTGAGCTGGAGAAGCCGGAGTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IRIFISCSSSTATCI*GLRSCVSWRSRSFC Trigger: ACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCTCAGACCCAAAATACAAGTGGCCGTCGAAGAAGAGCAGCTAATGAAGATCCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000173010.8 |
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| CDS TCA 72 bp | TTCTGTATGTGGACTGCTTGGCACAGAAAGGTCTTCTaGACTGTCATCTTTATCAGCAGCTGCAGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FCMWTAWHRKVF*TVIFISSCSWP Trigger: TGGCCAGCTGCAGCTGCTGATAAAGATGACAGTTCAGAAGACCTTTCTGTGCCAAGCAGTCCACATACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124737.8 |
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| CDS CCA 72 bp | GGTACAGGAACAATTGGCCTGTTAGAGGATGGTGCCTaGGTGATTACAGTACTTGAGGTTGGTGAAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GTGTIGLLEDGA*VITVLEVGEGT Trigger: AGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTTCCTGTACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000128531.8 ENSMUST00000154456.8 ENSMUST00000173010.8 |
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| CDS GCA 72 bp | AAACTTCCTCCTTTTCTCATCAGGATCTTCATTAGCTaGTCTTCTTCGACGGCCACTTGTATTTTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KLPPFLIRIFIS*SSSTATCILGL Trigger: CAGACCCAAAATACAAGTGGCCGTCGAAGAAGAGCAGCTAATGAAGATCCTGATGAGAAAAGGAGGAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000173010.8 |
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| CDS TCA 72 bp | TTTCTACAACAGAAGGCTCCTCAATTTTGCTTCTTATaGTGGGTGTTGCAAGAGGGGACAAATCTAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLQQKAPQFCFL*WVLQEGTNLEA Trigger: TGCCTCTAGATTTGTCCCCTCTTGCAACACCCATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000128531.8 ENSMUST00000136958.8 ENSMUST00000173010.8 |
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| CDS CAA 72 bp | ATAATTACACTTGAGTCAGAACTTGTGAGCAGCACATaGGGAACCTGTAATGATGCTGGACGAACGATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IITLESELVSST*GTCNDAGRTIA Trigger: AGCTATCGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTCACAAGTTCTGACTCAAGTGTAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000128531.8 ENSMUST00000154456.8 ENSMUST00000173010.8 |
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| CDS TCA 72 bp | ATTACAGTACTTGAGGTTGGTGAAGGTACTGCTTGTTaGATAATTACACTTGAGTCAGAACTTGTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ITVLEVGEGTAC*IITLESELVSS Trigger: GCTGCTCACAAGTTCTGACTCAAGTGTAATTATTCAACAAGCAGTACCTTCACCAACCTCAAGTACTGTAAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112017.8 ENSMUST00000128531.8 ENSMUST00000154456.8 ENSMUST00000173010.8 |
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| CDS CCA 72 bp | TTTACAGTATCACCATTGGTAACTGGAGGGTGTTGCTaGGTCAAAGCAGCTTTTAATCTCATTTTTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FTVSPLVTGGCC*VKAAFNLIFAS Trigger: AGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGCAACACCCTCCAGTTACCAATGGTGATACTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000055833.12 ENSMUST00000090802.11 ENSMUST00000100009.11 ENSMUST00000112007.8 ENSMUST00000112010.9 ENSMUST00000112016.9 ENSMUST00000112017.8 ENSMUST00000124737.8 ENSMUST00000136958.8 ENSMUST00000173010.8 |
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